BLASTX nr result
ID: Atropa21_contig00035240
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00035240
(809 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004237762.1| PREDICTED: uncharacterized mitochondrial pro... 168 5e-48
ref|XP_004248631.1| PREDICTED: uncharacterized mitochondrial pro... 142 3e-43
ref|XP_006338010.1| PREDICTED: F-box protein CPR30-like [Solanum... 129 9e-43
ref|XP_004294137.1| PREDICTED: uncharacterized mitochondrial pro... 130 9e-39
emb|CAN81026.1| hypothetical protein VITISV_023317 [Vitis vinifera] 125 1e-38
emb|CAN69190.1| hypothetical protein VITISV_001578 [Vitis vinifera] 124 2e-38
emb|CAN62906.1| hypothetical protein VITISV_043610 [Vitis vinifera] 123 2e-38
emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera] 116 7e-38
ref|XP_004300707.1| PREDICTED: uncharacterized mitochondrial pro... 120 7e-38
emb|CAN60374.1| hypothetical protein VITISV_001215 [Vitis vinifera] 127 3e-37
ref|XP_003631962.1| PREDICTED: uncharacterized protein LOC100855... 116 3e-37
emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera] 116 8e-37
gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi... 117 2e-36
dbj|BAD99221.1| polypepetide with reverse transcriptase and RNas... 115 2e-36
emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera] 114 4e-36
emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera] 107 5e-36
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t... 118 6e-36
emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera] 113 8e-36
ref|XP_004228847.1| PREDICTED: uncharacterized mitochondrial pro... 136 3e-35
emb|CAN61658.1| hypothetical protein VITISV_040310 [Vitis vinifera] 110 4e-35
>ref|XP_004237762.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
[Solanum lycopersicum]
Length = 273
Score = 168 bits (426), Expect(3) = 5e-48
Identities = 84/130 (64%), Positives = 99/130 (76%)
Frame = +2
Query: 2 YLTTTRPYIVFVVQCLS*FMHSPKALHIEAGLRIVRYIKHAPRLGVLMSSSSVPQLKVFC 181
YLTTTRP I F VQCLS FMH+PKA H++A LR+VRY+K AP LG+LMSS+ L+VFC
Sbjct: 91 YLTTTRPDISFAVQCLSQFMHAPKASHMDAALRLVRYLKTAPGLGILMSSTGGNNLQVFC 150
Query: 182 DDDWGSCIKIRRSITGYLVLFCSSHISWKSNKQATVSRSSTEAEYRVMTSLIAGVVCLTC 361
D DWGSCI RRSIT YL+ + S +SWKS KQ TVSRSSTEAEYR M S +A VV
Sbjct: 151 DADWGSCINSRRSITRYLIKYGDSPVSWKSKKQVTVSRSSTEAEYRAMASTVAEVVWAVG 210
Query: 362 LYQELGLIFS 391
L+QELG++ S
Sbjct: 211 LFQELGVVIS 220
Score = 42.4 bits (98), Expect(3) = 5e-48
Identities = 17/29 (58%), Positives = 23/29 (79%)
Frame = +3
Query: 462 TKYIGIDCYFIREKIQESVICTTYLPSID 548
TK+ IDC+FI+EKIQ+ ++ T YLPS D
Sbjct: 245 TKHFDIDCHFIKEKIQDGLLITAYLPSSD 273
Score = 28.5 bits (62), Expect(3) = 5e-48
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +1
Query: 391 LSILLFSDSKSAIHIVANLVFHE 459
L + ++SDS SA+ I AN +FHE
Sbjct: 221 LPVPVYSDSTSALQIAANSMFHE 243
>ref|XP_004248631.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
[Solanum lycopersicum]
Length = 297
Score = 142 bits (359), Expect(2) = 3e-43
Identities = 69/116 (59%), Positives = 84/116 (72%)
Frame = +2
Query: 2 YLTTTRPYIVFVVQCLS*FMHSPKALHIEAGLRIVRYIKHAPRLGVLMSSSSVPQLKVFC 181
YLTTTRP I F QCLS FMH+PK H+++ LR+VRY+K P LG+LMS + L+VFC
Sbjct: 102 YLTTTRPDISFAGQCLSQFMHAPKVSHMDSALRLVRYLKTEPGLGILMSLTGGDSLQVFC 161
Query: 182 DDDWGSCIKIRRSITGYLVLFCSSHISWKSNKQATVSRSSTEAEYRVMTSLIAGVV 349
D DWGSCI RRSIT Y + + S ISW+S KQ TVSRSS EAEYR M S +A ++
Sbjct: 162 DADWGSCINSRRSITRYFIKYGESLISWRSKKQVTVSRSSAEAEYRAMASTVAEII 217
Score = 59.7 bits (143), Expect(2) = 3e-43
Identities = 27/50 (54%), Positives = 38/50 (76%)
Frame = +3
Query: 462 TKYIGIDCYFIREKIQESVICTTYLPSIDQPADLLTKDLSKIQNAHLMSK 611
TK+I IDC+FIREKI++ ++ T YLPS +QPAD+LTK L K + + S+
Sbjct: 229 TKHIDIDCHFIREKIKDGMLITAYLPSSEQPADMLTKALGKGHHTYRASE 278
>ref|XP_006338010.1| PREDICTED: F-box protein CPR30-like [Solanum tuberosum]
Length = 630
Score = 129 bits (323), Expect(3) = 9e-43
Identities = 64/127 (50%), Positives = 85/127 (66%)
Frame = +2
Query: 2 YLTTTRPYIVFVVQCLS*FMHSPKALHIEAGLRIVRYIKHAPRLGVLMSSSSVPQLKVFC 181
Y+T TRP I F VQ LS F+ +PK H+EA +RIVRY+K P GVL+SS+ + +C
Sbjct: 42 YITMTRPDISFCVQTLSQFLQAPKQSHMEAAIRIVRYLKKEPGQGVLLSSNKNIDISAYC 101
Query: 182 DDDWGSCIKIRRSITGYLVLFCSSHISWKSNKQATVSRSSTEAEYRVMTSLIAGVVCLTC 361
D DW +C RRS+TGY+V S I WKS KQ TVS+SS EAEYR + S +A ++ +
Sbjct: 102 DTDWAACPNSRRSVTGYVVKLGDSPIIWKSKKQTTVSKSSAEAEYRSLASTVAELIWIIG 161
Query: 362 LYQELGL 382
L +ELG+
Sbjct: 162 LIKELGV 168
Score = 62.4 bits (150), Expect(3) = 9e-43
Identities = 24/48 (50%), Positives = 39/48 (81%)
Frame = +3
Query: 462 TKYIGIDCYFIREKIQESVICTTYLPSIDQPADLLTKDLSKIQNAHLM 605
TK+I IDC+FIREK+ + ++ T Y+P+ +QPAD+LTK L ++Q+ H++
Sbjct: 196 TKHIEIDCHFIREKVMQGMVSTNYIPTNEQPADVLTKSLPRVQHEHII 243
Score = 30.4 bits (67), Expect(3) = 9e-43
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +1
Query: 391 LSILLFSDSKSAIHIVANLVFHE 459
L + ++SDSK+AI I AN V+HE
Sbjct: 172 LPVKVYSDSKAAIQIAANPVYHE 194
>ref|XP_004294137.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
[Fragaria vesca subsp. vesca]
Length = 331
Score = 130 bits (326), Expect(3) = 9e-39
Identities = 66/128 (51%), Positives = 82/128 (64%)
Frame = +2
Query: 2 YLTTTRPYIVFVVQCLS*FMHSPKALHIEAGLRIVRYIKHAPRLGVLMSSSSVPQLKVFC 181
YLT +RP I + V LS FMH P+ H+EA LR++RY+K AP G+ SS+S +L+ +C
Sbjct: 118 YLTVSRPDITYAVHVLSRFMHQPRKSHMEAALRVIRYLKGAPGQGLFFSSTSDLKLRAYC 177
Query: 182 DDDWGSCIKIRRSITGYLVLFCSSHISWKSNKQATVSRSSTEAEYRVMTSLIAGVVCLTC 361
D DWG C RRS TGY V S ISWKS +Q TVS SS EAEY VMT + L
Sbjct: 178 DSDWGDCPLTRRSTTGYCVFLGPSLISWKSKRQKTVSLSSAEAEYHVMTGACCELTWLRY 237
Query: 362 LYQELGLI 385
L ++LGLI
Sbjct: 238 LLRDLGLI 245
Score = 49.7 bits (117), Expect(3) = 9e-39
Identities = 23/55 (41%), Positives = 37/55 (67%)
Frame = +3
Query: 465 KYIGIDCYFIREKIQESVICTTYLPSIDQPADLLTKDLSKIQNAHLMSKLGMKNI 629
++I +DC++IR+KIQ+ + Y+ S Q AD+LTK L K ++ KLG++NI
Sbjct: 273 RHIEMDCHYIRDKIQDGSVVAKYVSSTHQLADVLTKPLGKETFVPMVRKLGVQNI 327
Score = 28.5 bits (62), Expect(3) = 9e-39
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +1
Query: 403 LFSDSKSAIHIVANLVFHE 459
L D+K+A+HI AN VFHE
Sbjct: 252 LSCDNKAALHIAANPVFHE 270
>emb|CAN81026.1| hypothetical protein VITISV_023317 [Vitis vinifera]
Length = 1158
Score = 125 bits (314), Expect(3) = 1e-38
Identities = 61/128 (47%), Positives = 81/128 (63%)
Frame = +2
Query: 2 YLTTTRPYIVFVVQCLS*FMHSPKALHIEAGLRIVRYIKHAPRLGVLMSSSSVPQLKVFC 181
YLT +RPYI + V LS FMH P+ H+EA R+VRY+K+AP G+ SS++ +L+ +C
Sbjct: 945 YLTMSRPYITYAVHVLSRFMHQPRKAHMEAAFRVVRYLKNAPGQGLFFSSNNDFRLRAYC 1004
Query: 182 DDDWGSCIKIRRSITGYLVLFCSSHISWKSNKQATVSRSSTEAEYRVMTSLIAGVVCLTC 361
D DW C RRS TGY V S ISW+S +Q TVS SS EAEYR MT + L
Sbjct: 1005 DSDWAGCPLTRRSTTGYCVFLGPSLISWRSKRQKTVSLSSAEAEYRAMTGACCELTXLRY 1064
Query: 362 LYQELGLI 385
L ++L ++
Sbjct: 1065 LLKDLSVL 1072
Score = 48.9 bits (115), Expect(3) = 1e-38
Identities = 23/56 (41%), Positives = 39/56 (69%)
Frame = +3
Query: 462 TKYIGIDCYFIREKIQESVICTTYLPSIDQPADLLTKDLSKIQNAHLMSKLGMKNI 629
T++I +DC++IR+K+Q+ I T ++ S Q AD+LTK L A ++ KLG+++I
Sbjct: 1099 TRHIEMDCHYIRDKVQDGSIITRHVSSAHQLADILTKPLGNEIFAPMIRKLGVQDI 1154
Score = 33.5 bits (75), Expect(3) = 1e-38
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = +1
Query: 388 QLSILLFSDSKSAIHIVANLVFHE 459
Q +LL+ D+K+A+HI AN VFHE
Sbjct: 1074 QEPVLLYCDNKAALHIAANPVFHE 1097
>emb|CAN69190.1| hypothetical protein VITISV_001578 [Vitis vinifera]
Length = 1323
Score = 124 bits (310), Expect(3) = 2e-38
Identities = 61/128 (47%), Positives = 81/128 (63%)
Frame = +2
Query: 2 YLTTTRPYIVFVVQCLS*FMHSPKALHIEAGLRIVRYIKHAPRLGVLMSSSSVPQLKVFC 181
YLT +RP I + V LS FMH P+ H+EA R+VRY+K+AP G+ SS++ +L+ +C
Sbjct: 1110 YLTVSRPDITYAVHVLSRFMHQPRKAHMEAAFRVVRYLKNAPGQGLFFSSNNDFRLRAYC 1169
Query: 182 DDDWGSCIKIRRSITGYLVLFCSSHISWKSNKQATVSRSSTEAEYRVMTSLIAGVVCLTC 361
D DW C RRS TGY V S ISW+S +Q TVS SS EAEYR MT + L
Sbjct: 1170 DSDWAGCPLTRRSTTGYCVFLGPSLISWRSKRQKTVSLSSAEAEYRAMTGACCELTWLRY 1229
Query: 362 LYQELGLI 385
L ++LG++
Sbjct: 1230 LLKDLGVL 1237
Score = 51.2 bits (121), Expect(3) = 2e-38
Identities = 25/56 (44%), Positives = 40/56 (71%)
Frame = +3
Query: 462 TKYIGIDCYFIREKIQESVICTTYLPSIDQPADLLTKDLSKIQNAHLMSKLGMKNI 629
T++I +DC++IR+KIQ+ I T ++ S Q AD+LTK L K A ++ KLG+++I
Sbjct: 1264 TRHIEMDCHYIRDKIQDGSIITRHVSSAHQLADILTKPLGKEFFAPMIRKLGVQDI 1319
Score = 32.0 bits (71), Expect(3) = 2e-38
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +1
Query: 400 LLFSDSKSAIHIVANLVFHE 459
LL+ D+K+A+HI AN VFHE
Sbjct: 1243 LLYCDNKAALHIAANPVFHE 1262
>emb|CAN62906.1| hypothetical protein VITISV_043610 [Vitis vinifera]
Length = 1498
Score = 123 bits (309), Expect(3) = 2e-38
Identities = 61/128 (47%), Positives = 81/128 (63%)
Frame = +2
Query: 2 YLTTTRPYIVFVVQCLS*FMHSPKALHIEAGLRIVRYIKHAPRLGVLMSSSSVPQLKVFC 181
YLT +RP I + V LS FMH P+ H+EA R+VRY+K+AP G+ SS++ +L+ +C
Sbjct: 1285 YLTVSRPDITYAVHVLSRFMHQPRKAHMEAAFRVVRYLKNAPGQGLFFSSNNDFRLRXYC 1344
Query: 182 DDDWGSCIKIRRSITGYLVLFCSSHISWKSNKQATVSRSSTEAEYRVMTSLIAGVVCLTC 361
D DW C RRS TGY V S ISW+S +Q TVS SS EAEYR MT + L
Sbjct: 1345 DSDWAGCPLTRRSTTGYCVFLGPSLISWRSKRQKTVSLSSAEAEYRAMTGACCELTWLRY 1404
Query: 362 LYQELGLI 385
L ++LG++
Sbjct: 1405 LLKDLGVL 1412
Score = 51.2 bits (121), Expect(3) = 2e-38
Identities = 25/56 (44%), Positives = 40/56 (71%)
Frame = +3
Query: 462 TKYIGIDCYFIREKIQESVICTTYLPSIDQPADLLTKDLSKIQNAHLMSKLGMKNI 629
T++I +DC++IR+KIQ+ I T ++ S Q AD+LTK L K A ++ KLG+++I
Sbjct: 1439 TRHIEMDCHYIRDKIQDGSIITRHVSSAHQLADILTKPLGKEFFAPMIRKLGVQDI 1494
Score = 32.0 bits (71), Expect(3) = 2e-38
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +1
Query: 400 LLFSDSKSAIHIVANLVFHE 459
LL+ D+K+A+HI AN VFHE
Sbjct: 1418 LLYCDNKAALHIAANPVFHE 1437
>emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]
Length = 1523
Score = 116 bits (291), Expect(3) = 7e-38
Identities = 55/127 (43%), Positives = 78/127 (61%)
Frame = +2
Query: 2 YLTTTRPYIVFVVQCLS*FMHSPKALHIEAGLRIVRYIKHAPRLGVLMSSSSVPQLKVFC 181
YLT TRP +V+ V LS FM +P+ H++A +++RY+K P G+ + S+ +L +C
Sbjct: 1265 YLTITRPDLVYAVHILSQFMDTPRQPHLDAAYKVLRYVKQTPGQGIFLPSTGQLELTAYC 1324
Query: 182 DDDWGSCIKIRRSITGYLVLFCSSHISWKSNKQATVSRSSTEAEYRVMTSLIAGVVCLTC 361
D DW C RRS TGY + F ++ ISWK+ KQ TVSRSS EAEYR M + + L
Sbjct: 1325 DADWARCKDTRRSTTGYCIFFGNAPISWKTKKQGTVSRSSAEAEYRSMATTCCEITWLRS 1384
Query: 362 LYQELGL 382
L +L +
Sbjct: 1385 LLADLNV 1391
Score = 58.2 bits (139), Expect(3) = 7e-38
Identities = 28/60 (46%), Positives = 43/60 (71%)
Frame = +3
Query: 462 TKYIGIDCYFIREKIQESVICTTYLPSIDQPADLLTKDLSKIQNAHLMSKLGMKNIIISL 641
TK+I +DC+ +REK+Q ++ T ++ + +QPADL TK LS Q + L+SKLG+ NI +L
Sbjct: 1419 TKHIEMDCHVVREKVQRGLVKTMHIRTQEQPADLFTKPLSSKQFSTLLSKLGVINIHTNL 1478
Score = 30.4 bits (67), Expect(3) = 7e-38
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = +1
Query: 394 SILLFSDSKSAIHIVANLVFHE 459
++ LF D+++AIHI +N VFHE
Sbjct: 1396 AVKLFCDNQAAIHIASNPVFHE 1417
>ref|XP_004300707.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
[Fragaria vesca subsp. vesca]
Length = 316
Score = 120 bits (301), Expect(3) = 7e-38
Identities = 57/127 (44%), Positives = 82/127 (64%)
Frame = +2
Query: 2 YLTTTRPYIVFVVQCLS*FMHSPKALHIEAGLRIVRYIKHAPRLGVLMSSSSVPQLKVFC 181
YLT TRP +V+ V LS FM P+ H++A +++RYIK P GVL+SS+ +L+ FC
Sbjct: 75 YLTITRPDLVYAVHILSQFMDKPRQPHLKAAHKVLRYIKQTPGQGVLLSSTGPLELRAFC 134
Query: 182 DDDWGSCIKIRRSITGYLVLFCSSHISWKSNKQATVSRSSTEAEYRVMTSLIAGVVCLTC 361
D DW C RR ++GY VL ++H+SWK+ KQ TV+RSS EA+YR M + V L
Sbjct: 135 DADWARCRDTRRFVSGYCVLIGNAHVSWKTKKQTTVARSSAEAKYRSMATTCCEVTWLLS 194
Query: 362 LYQELGL 382
+ ++L +
Sbjct: 195 ILRDLNI 201
Score = 55.1 bits (131), Expect(3) = 7e-38
Identities = 27/56 (48%), Positives = 37/56 (66%)
Frame = +3
Query: 462 TKYIGIDCYFIREKIQESVICTTYLPSIDQPADLLTKDLSKIQNAHLMSKLGMKNI 629
TKYI IDC+ +REK+Q VI ++ + +QP DL TK +S Q L+SKL + NI
Sbjct: 229 TKYIEIDCHVVREKVQRGVIKPAHVRTKEQPTDLFTKSVSAAQFKALLSKLSVINI 284
Score = 29.6 bits (65), Expect(3) = 7e-38
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +1
Query: 388 QLSILLFSDSKSAIHIVANLVFHE 459
Q + L+ D+++AIHI +N VFHE
Sbjct: 204 QQPVKLYCDNQAAIHIASNPVFHE 227
>emb|CAN60374.1| hypothetical protein VITISV_001215 [Vitis vinifera]
Length = 1535
Score = 127 bits (318), Expect(3) = 3e-37
Identities = 63/128 (49%), Positives = 83/128 (64%)
Frame = +2
Query: 2 YLTTTRPYIVFVVQCLS*FMHSPKALHIEAGLRIVRYIKHAPRLGVLMSSSSVPQLKVFC 181
YLT +RP I + V LS FMH P+ LH+EA LR+VRY+K+AP G+ SS+S +L+ +C
Sbjct: 1306 YLTVSRPDITYSVHVLSRFMHQPRKLHMEAALRVVRYLKNAPGQGLFFSSNSDFRLRAYC 1365
Query: 182 DDDWGSCIKIRRSITGYLVLFCSSHISWKSNKQATVSRSSTEAEYRVMTSLIAGVVCLTC 361
D DW C RRS TGY V S +SW+S +Q TVS SS EAEYR MT + L
Sbjct: 1366 DSDWAGCPITRRSTTGYCVFLGPSLVSWRSKRQKTVSLSSAEAEYRAMTGACCELTWLRY 1425
Query: 362 LYQELGLI 385
L ++LG++
Sbjct: 1426 LLRDLGVL 1433
Score = 44.3 bits (103), Expect(3) = 3e-37
Identities = 21/51 (41%), Positives = 34/51 (66%)
Frame = +3
Query: 462 TKYIGIDCYFIREKIQESVICTTYLPSIDQPADLLTKDLSKIQNAHLMSKL 614
T++I +DC++IR+KIQ+ + T ++ S Q AD+LTK L K ++ KL
Sbjct: 1460 TRHIEMDCHYIRDKIQDGSVATRFVNSAHQLADVLTKALGKEVFTPMIRKL 1510
Score = 32.0 bits (71), Expect(3) = 3e-37
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +1
Query: 400 LLFSDSKSAIHIVANLVFHE 459
LL+ D+K+A+HI AN VFHE
Sbjct: 1439 LLYCDNKAALHITANPVFHE 1458
>ref|XP_003631962.1| PREDICTED: uncharacterized protein LOC100855226 [Vitis vinifera]
Length = 1011
Score = 116 bits (291), Expect(3) = 3e-37
Identities = 55/127 (43%), Positives = 78/127 (61%)
Frame = +2
Query: 2 YLTTTRPYIVFVVQCLS*FMHSPKALHIEAGLRIVRYIKHAPRLGVLMSSSSVPQLKVFC 181
YLT TRP +V+ V LS FM +P+ H++A +++RY+K P G+ + S+ +L +C
Sbjct: 792 YLTITRPDLVYAVHILSQFMDTPRQPHLDAAYKVLRYVKQTPGQGIFLPSTGQLELTAYC 851
Query: 182 DDDWGSCIKIRRSITGYLVLFCSSHISWKSNKQATVSRSSTEAEYRVMTSLIAGVVCLTC 361
D DW C RRS TGY + F ++ ISWK+ KQ TVSRSS EAEYR M + + L
Sbjct: 852 DADWARCKDTRRSTTGYCIFFGNAPISWKTKKQGTVSRSSAEAEYRSMATTCCEITWLRS 911
Query: 362 LYQELGL 382
L +L +
Sbjct: 912 LLADLNV 918
Score = 56.2 bits (134), Expect(3) = 3e-37
Identities = 27/60 (45%), Positives = 43/60 (71%)
Frame = +3
Query: 462 TKYIGIDCYFIREKIQESVICTTYLPSIDQPADLLTKDLSKIQNAHLMSKLGMKNIIISL 641
TK+I +DC+ +REK+Q ++ T ++ + +QPA+L TK LS Q + L+SKLG+ NI +L
Sbjct: 946 TKHIEMDCHVVREKVQRGLVKTMHIRTQEQPANLFTKPLSSKQFSTLLSKLGVINIHTNL 1005
Score = 30.4 bits (67), Expect(3) = 3e-37
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = +1
Query: 394 SILLFSDSKSAIHIVANLVFHE 459
++ LF D+++AIHI +N VFHE
Sbjct: 923 AVKLFCDNQAAIHIASNPVFHE 944
>emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]
Length = 1099
Score = 116 bits (291), Expect(3) = 8e-37
Identities = 60/127 (47%), Positives = 79/127 (62%)
Frame = +2
Query: 2 YLTTTRPYIVFVVQCLS*FMHSPKALHIEAGLRIVRYIKHAPRLGVLMSSSSVPQLKVFC 181
YL TRP + + V LS FMH P+ H EA LR+VRY+K P G+L+ + S L+ +C
Sbjct: 886 YLAVTRPDLAYSVHILSQFMHEPRIEHWEAALRVVRYLKGTPGQGILLRADSDLSLQGWC 945
Query: 182 DDDWGSCIKIRRSITGYLVLFCSSHISWKSNKQATVSRSSTEAEYRVMTSLIAGVVCLTC 361
D DW +C RRS++G+LV S ISWK+ KQ TVSRSS EAEYR M ++ + L
Sbjct: 946 DSDWAACPVTRRSLSGWLVFLGQSPISWKTKKQHTVSRSSAEAEYRAMAAVTCELKWLKG 1005
Query: 362 LYQELGL 382
L LG+
Sbjct: 1006 LLLSLGV 1012
Score = 54.7 bits (130), Expect(3) = 8e-37
Identities = 23/53 (43%), Positives = 39/53 (73%)
Frame = +3
Query: 462 TKYIGIDCYFIREKIQESVICTTYLPSIDQPADLLTKDLSKIQNAHLMSKLGM 620
TK+I +DC+F+R+ I + +I +Y+P++ Q AD+ TK L K Q +L++KLG+
Sbjct: 1040 TKHIEVDCHFVRDAITDGLIAPSYVPTVTQLADIFTKALGKKQFDYLLAKLGI 1092
Score = 30.4 bits (67), Expect(3) = 8e-37
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +1
Query: 394 SILLFSDSKSAIHIVANLVFHE 459
+I LF DS+SA+H+ N VFHE
Sbjct: 1017 AIKLFCDSQSALHMAKNPVFHE 1038
>gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1501
Score = 117 bits (292), Expect(3) = 2e-36
Identities = 59/127 (46%), Positives = 82/127 (64%)
Frame = +2
Query: 2 YLTTTRPYIVFVVQCLS*FMHSPKALHIEAGLRIVRYIKHAPRLGVLMSSSSVPQLKVFC 181
YL TRP + + V L+ FM +P+ H +A LR+VRY+K +P G+L+++ L+V+C
Sbjct: 1288 YLLHTRPELSYSVHVLAQFMQNPREAHFDAALRVVRYLKGSPGQGILLNADPDLTLEVYC 1347
Query: 182 DDDWGSCIKIRRSITGYLVLFCSSHISWKSNKQATVSRSSTEAEYRVMTSLIAGVVCLTC 361
D DW SC RRSI+ Y+VL S ISWK+ KQ TVS SS EAEYR M+ + + L
Sbjct: 1348 DSDWQSCPLTRRSISAYVVLLGGSPISWKTKKQDTVSHSSAEAEYRAMSYALKEIKWLRK 1407
Query: 362 LYQELGL 382
L +ELG+
Sbjct: 1408 LLKELGI 1414
Score = 50.8 bits (120), Expect(3) = 2e-36
Identities = 22/56 (39%), Positives = 40/56 (71%)
Frame = +3
Query: 462 TKYIGIDCYFIREKIQESVICTTYLPSIDQPADLLTKDLSKIQNAHLMSKLGMKNI 629
TK+I DC+ +R+ +++ +I T ++ + +Q AD+ TK L + Q +LMSKLG++N+
Sbjct: 1442 TKHIESDCHSVRDAVRDGIITTQHVRTTEQLADVFTKALGRNQFLYLMSKLGVQNL 1497
Score = 32.3 bits (72), Expect(3) = 2e-36
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +1
Query: 403 LFSDSKSAIHIVANLVFHE 459
L+ DSK+AIHI AN VFHE
Sbjct: 1422 LYCDSKAAIHIAANPVFHE 1440
>dbj|BAD99221.1| polypepetide with reverse transcriptase and RNaseH domains [Petunia
x hybrida]
Length = 389
Score = 115 bits (288), Expect(3) = 2e-36
Identities = 61/130 (46%), Positives = 79/130 (60%)
Frame = +2
Query: 2 YLTTTRPYIVFVVQCLS*FMHSPKALHIEAGLRIVRYIKHAPRLGVLMSSSSVPQLKVFC 181
YLT TRP I F VQ LS M SP++ H+EA +RYI++ P LG+ +SS QL FC
Sbjct: 173 YLTHTRPDISFAVQTLSQHMQSPRSGHLEAAYHTLRYIRNNPGLGIFLSSEQSFQLTGFC 232
Query: 182 DDDWGSCIKIRRSITGYLVLFCSSHISWKSNKQATVSRSSTEAEYRVMTSLIAGVVCLTC 361
D DW SC RRSI+G+ + +SWKS KQ VS SS EAEYR + L+A + +
Sbjct: 233 DADWASCPDSRRSISGFFLTMGGCPLSWKSKKQQVVSLSSAEAEYRSLRRLVAEIAWIVR 292
Query: 362 LYQELGLIFS 391
L +L + FS
Sbjct: 293 LLHDLSVDFS 302
Score = 52.4 bits (124), Expect(3) = 2e-36
Identities = 23/54 (42%), Positives = 38/54 (70%)
Frame = +3
Query: 462 TKYIGIDCYFIREKIQESVICTTYLPSIDQPADLLTKDLSKIQNAHLMSKLGMK 623
TK+I +DC+F+REK+ + +I +++PS Q AD+ TK L+ + LM KLG++
Sbjct: 327 TKHIELDCHFVREKLLDGLISLSFVPSSSQIADIFTKSLTGPLHRSLMGKLGVR 380
Score = 32.3 bits (72), Expect(3) = 2e-36
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +1
Query: 382 DFQLSILLFSDSKSAIHIVANLVFHE 459
DF L + + D++SAIHI N VFHE
Sbjct: 300 DFSLPVSVHCDNQSAIHIAKNPVFHE 325
>emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera]
Length = 1129
Score = 114 bits (285), Expect(3) = 4e-36
Identities = 58/127 (45%), Positives = 77/127 (60%)
Frame = +2
Query: 2 YLTTTRPYIVFVVQCLS*FMHSPKALHIEAGLRIVRYIKHAPRLGVLMSSSSVPQLKVFC 181
YL TRP + + V LS FM P+ H E LR+V Y+K P G+L+ + S L+ +C
Sbjct: 916 YLAVTRPNLAYSVHILSQFMQEPRIEHWEVALRVVHYLKGTPGQGILLRADSDLSLQGWC 975
Query: 182 DDDWGSCIKIRRSITGYLVLFCSSHISWKSNKQATVSRSSTEAEYRVMTSLIAGVVCLTC 361
D DW +C RRS++G+LV SHISWK+ KQ TVSRSS EAEYR M ++ + L
Sbjct: 976 DSDWAACPVTRRSLSGWLVFLGQSHISWKTKKQHTVSRSSAEAEYRAMAAVTCELKWLKG 1035
Query: 362 LYQELGL 382
L LG+
Sbjct: 1036 LLLSLGV 1042
Score = 54.7 bits (130), Expect(3) = 4e-36
Identities = 23/53 (43%), Positives = 39/53 (73%)
Frame = +3
Query: 462 TKYIGIDCYFIREKIQESVICTTYLPSIDQPADLLTKDLSKIQNAHLMSKLGM 620
TK+I +DC+F+R+ I + +I +Y+P++ Q AD+ TK L K Q +L++KLG+
Sbjct: 1070 TKHIEVDCHFVRDAITDGLIAPSYVPTVTQLADIFTKALGKKQFDYLLAKLGI 1122
Score = 30.4 bits (67), Expect(3) = 4e-36
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +1
Query: 394 SILLFSDSKSAIHIVANLVFHE 459
+I LF DS+SA+H+ N VFHE
Sbjct: 1047 AIKLFCDSQSALHMTKNPVFHE 1068
>emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]
Length = 1316
Score = 107 bits (266), Expect(3) = 5e-36
Identities = 56/137 (40%), Positives = 78/137 (56%), Gaps = 2/137 (1%)
Frame = +2
Query: 2 YLTTTRPYIVFVVQCLS*FMHSPKALHIEAGLRIVRYIKHAPRLGVLMSSSSVPQLKVFC 181
YLT TRP + + V LS FM SP+ H++A R+VRY+K P G+++ + + QL +
Sbjct: 1103 YLTVTRPDLTYXVHVLSQFMQSPREEHLDAAYRVVRYLKKGPGQGIVLKADNDLQLYCYS 1162
Query: 182 DDDWGSCIKIRRSITGYLVLFCSSHISWKSNKQATVSRSSTEAEYRVMTSLIAGVVCLTC 361
D DW SC RRSI+G V +S ISW+ KQ T+SRSS E EY M + + L
Sbjct: 1163 DSDWXSCPLTRRSISGCCVKLGTSPISWRCKKQGTISRSSAEVEYXSMAMAASELTWLKS 1222
Query: 362 LYQELGLIFS--YQFYC 406
L LG++ + YC
Sbjct: 1223 LLASLGVLHDKPMKLYC 1239
Score = 61.6 bits (148), Expect(3) = 5e-36
Identities = 30/56 (53%), Positives = 40/56 (71%)
Frame = +3
Query: 462 TKYIGIDCYFIREKIQESVICTTYLPSIDQPADLLTKDLSKIQNAHLMSKLGMKNI 629
TK+I IDC+F+REK+Q I TTYLPS Q AD+ TK L + Q L SKLG++++
Sbjct: 1257 TKHIEIDCHFVREKVQSGEIVTTYLPSKLQXADMFTKALGRQQFLFLSSKLGIRDL 1312
Score = 30.4 bits (67), Expect(3) = 5e-36
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +1
Query: 403 LFSDSKSAIHIVANLVFHE 459
L+ D+K+A+HI AN VFHE
Sbjct: 1237 LYCDNKAALHIAANPVFHE 1255
>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1491
Score = 118 bits (296), Expect(3) = 6e-36
Identities = 61/127 (48%), Positives = 84/127 (66%)
Frame = +2
Query: 2 YLTTTRPYIVFVVQCLS*FMHSPKALHIEAGLRIVRYIKHAPRLGVLMSSSSVPQLKVFC 181
YL TRP + + V LS FM +P+ H+EA +RIVRY+K +P G+L+SS+ L+V+C
Sbjct: 1278 YLLHTRPELSYSVHVLSQFMQAPREAHLEAAMRIVRYLKGSPGQGILLSSNKDLTLEVYC 1337
Query: 182 DDDWGSCIKIRRSITGYLVLFCSSHISWKSNKQATVSRSSTEAEYRVMTSLIAGVVCLTC 361
D D+ SC RRS++ Y+VL S ISWK+ KQ TVS SS EAEYR M+ + + L
Sbjct: 1338 DSDFQSCPLTRRSLSAYVVLLGGSPISWKTKKQDTVSHSSAEAEYRAMSVALKEIKWLNK 1397
Query: 362 LYQELGL 382
L +ELG+
Sbjct: 1398 LLKELGI 1404
Score = 50.1 bits (118), Expect(3) = 6e-36
Identities = 22/56 (39%), Positives = 40/56 (71%)
Frame = +3
Query: 462 TKYIGIDCYFIREKIQESVICTTYLPSIDQPADLLTKDLSKIQNAHLMSKLGMKNI 629
TK+I DC+ +R+ +++ +I T ++ + +Q AD+ TK L + Q +LMSKLG++N+
Sbjct: 1432 TKHIERDCHSVRDAVRDGIITTHHVRTSEQLADIFTKALGRNQFIYLMSKLGIQNL 1487
Score = 30.0 bits (66), Expect(3) = 6e-36
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = +1
Query: 403 LFSDSKSAIHIVANLVFHE 459
LF DSK+AI I AN VFHE
Sbjct: 1412 LFCDSKAAISIAANPVFHE 1430
>emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]
Length = 1178
Score = 113 bits (282), Expect(3) = 8e-36
Identities = 59/127 (46%), Positives = 78/127 (61%)
Frame = +2
Query: 2 YLTTTRPYIVFVVQCLS*FMHSPKALHIEAGLRIVRYIKHAPRLGVLMSSSSVPQLKVFC 181
YL TRP + + V LS FM P+ H EA LR+VRY+K P G+L+ + S L+ +C
Sbjct: 965 YLAVTRPDLAYSVHILSQFMXEPRIEHWEAALRVVRYLKGTPGQGILLRADSDLSLQGWC 1024
Query: 182 DDDWGSCIKIRRSITGYLVLFCSSHISWKSNKQATVSRSSTEAEYRVMTSLIAGVVCLTC 361
D DW +C RRS++G+LV S ISWK+ KQ TVSRSS EAEYR M ++ + L
Sbjct: 1025 DSDWAACPVTRRSLSGWLVFLGQSPISWKTKKQHTVSRSSAEAEYRAMAAVTCELKWLKG 1084
Query: 362 LYQELGL 382
L LG+
Sbjct: 1085 LLLSLGV 1091
Score = 54.7 bits (130), Expect(3) = 8e-36
Identities = 23/53 (43%), Positives = 39/53 (73%)
Frame = +3
Query: 462 TKYIGIDCYFIREKIQESVICTTYLPSIDQPADLLTKDLSKIQNAHLMSKLGM 620
TK+I +DC+F+R+ I + +I +Y+P++ Q AD+ TK L K Q +L++KLG+
Sbjct: 1119 TKHIEVDCHFVRDAITDGLIAPSYVPTVTQLADIFTKALGKKQFDYLLAKLGI 1171
Score = 30.4 bits (67), Expect(3) = 8e-36
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +1
Query: 394 SILLFSDSKSAIHIVANLVFHE 459
+I LF DS+SA+H+ N VFHE
Sbjct: 1096 AIKLFCDSQSALHMAKNPVFHE 1117
>ref|XP_004228847.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
[Solanum lycopersicum]
Length = 240
Score = 136 bits (342), Expect(3) = 3e-35
Identities = 68/134 (50%), Positives = 89/134 (66%)
Frame = +2
Query: 2 YLTTTRPYIVFVVQCLS*FMHSPKALHIEAGLRIVRYIKHAPRLGVLMSSSSVPQLKVFC 181
Y+T TR I +VVQ LS FMHSPK H+ A LR+V+YIK+A G+LM S + +C
Sbjct: 71 YITMTRIDIAYVVQVLSQFMHSPKQSHMNAALRVVKYIKNALGFGLLMPSDCSKKFVAYC 130
Query: 182 DDDWGSCIKIRRSITGYLVLFCSSHISWKSNKQATVSRSSTEAEYRVMTSLIAGVVCLTC 361
D DWG C++ RRS+TGYLV F ++ +SWKS KQ V+RSS EAE+R M S++A V L
Sbjct: 131 DSDWGGCLQTRRSVTGYLVKFGNTVVSWKSKKQKMVARSSAEAEFRSMASVVAEVTWLIG 190
Query: 362 LYQELGLIFSYQFY 403
LY+EL + Y
Sbjct: 191 LYKELRISIEVPIY 204
Score = 32.0 bits (71), Expect(3) = 3e-35
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +1
Query: 388 QLSILLFSDSKSAIHIVANLVFHE 459
++ I L+ DSK+AI I NL+FHE
Sbjct: 200 EVPIYLYCDSKAAIQIAGNLIFHE 223
Score = 28.1 bits (61), Expect(3) = 3e-35
Identities = 10/15 (66%), Positives = 14/15 (93%)
Frame = +3
Query: 462 TKYIGIDCYFIREKI 506
TK+I IDC+F+R+KI
Sbjct: 225 TKHIDIDCHFVRDKI 239
>emb|CAN61658.1| hypothetical protein VITISV_040310 [Vitis vinifera]
Length = 1461
Score = 110 bits (276), Expect(3) = 4e-35
Identities = 57/127 (44%), Positives = 77/127 (60%)
Frame = +2
Query: 2 YLTTTRPYIVFVVQCLS*FMHSPKALHIEAGLRIVRYIKHAPRLGVLMSSSSVPQLKVFC 181
YL TRP + + V LS FM P+ H EA LR+V Y+K P G+L+ + S L+ +C
Sbjct: 1248 YLAVTRPDLAYSVHILSQFMQEPRIEHWEAALRVVHYLKGTPGQGILLRADSDLSLQGWC 1307
Query: 182 DDDWGSCIKIRRSITGYLVLFCSSHISWKSNKQATVSRSSTEAEYRVMTSLIAGVVCLTC 361
D DW +C +RS++G+LV S ISWK+ KQ TVSRSS EAEYR M ++ + L
Sbjct: 1308 DSDWAACPVTKRSLSGWLVFLGQSPISWKTKKQHTVSRSSAEAEYRAMAAVTCELKWLKG 1367
Query: 362 LYQELGL 382
L LG+
Sbjct: 1368 LLLSLGM 1374
Score = 54.7 bits (130), Expect(3) = 4e-35
Identities = 23/53 (43%), Positives = 39/53 (73%)
Frame = +3
Query: 462 TKYIGIDCYFIREKIQESVICTTYLPSIDQPADLLTKDLSKIQNAHLMSKLGM 620
TK+I +DC+F+R+ I + +I +Y+P++ Q AD+ TK L K Q +L++KLG+
Sbjct: 1402 TKHIEVDCHFVRDAITDGLIAPSYVPTVTQLADIFTKALGKKQFDYLLAKLGI 1454
Score = 30.4 bits (67), Expect(3) = 4e-35
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +1
Query: 394 SILLFSDSKSAIHIVANLVFHE 459
+I LF DS+SA+H+ N VFHE
Sbjct: 1379 AIKLFCDSQSALHMAKNPVFHE 1400