BLASTX nr result
ID: Atropa21_contig00035233
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00035233
(2025 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAD99220.1| polypeptide with an integrase domain [Petunia x ... 130 2e-59
ref|XP_004235138.1| PREDICTED: uncharacterized protein LOC101243... 134 6e-58
ref|XP_004252107.1| PREDICTED: uncharacterized protein LOC101259... 131 9e-57
ref|XP_004240277.1| PREDICTED: uncharacterized protein LOC101248... 127 2e-55
ref|XP_004239452.1| PREDICTED: uncharacterized protein LOC101259... 124 7e-55
ref|XP_004231364.1| PREDICTED: uncharacterized protein LOC101245... 132 4e-53
gb|ACB45089.1| putative polyprotein [Solanum habrochaites] 117 1e-51
ref|XP_004240625.1| PREDICTED: uncharacterized protein LOC101261... 112 6e-51
ref|XP_004228785.1| PREDICTED: uncharacterized protein LOC101255... 130 1e-50
gb|AAF79879.1|AC000348_32 T7N9.5 [Arabidopsis thaliana] 138 3e-49
emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera] 140 8e-49
gb|AAD41979.1| putative retroelement pol polyprotein [Arabidopsi... 127 2e-48
emb|CAN76546.1| hypothetical protein VITISV_010420 [Vitis vinifera] 124 9e-48
emb|CAN62906.1| hypothetical protein VITISV_043610 [Vitis vinifera] 129 1e-47
emb|CAN60374.1| hypothetical protein VITISV_001215 [Vitis vinifera] 131 4e-47
gb|AAC33963.1| contains similarity to reverse transcriptases (Pf... 146 2e-46
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t... 117 3e-46
gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsi... 117 3e-46
gb|EOY05030.1| Cysteine-rich RLK (RECEPTOR-like protein kinase) ... 127 6e-46
dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis t... 128 1e-45
>dbj|BAD99220.1| polypeptide with an integrase domain [Petunia x hybrida]
Length = 492
Score = 130 bits (326), Expect(3) = 2e-59
Identities = 66/137 (48%), Positives = 89/137 (64%)
Frame = +3
Query: 1038 GYTQQNRVVERKHTHLLEVAKGLIFQSSLPIQYWGECILTATHLVNRLSPL*FYKESQPM 1217
G QQN VVERKH HLLE + L++QS LP ++WG+C+LTAT+L+NR P P
Sbjct: 167 GTPQQNGVVERKHRHLLETCRALLYQSHLPKKFWGDCLLTATYLINRF-PSKVLNGKCPY 225
Query: 1218 KFFLANHPLIRT*DILGCLCYVSTLSHPRNKF*PRARECIFLGYPQTQKGFKVLELESRK 1397
+ + P G LC+VSTL+ R+K PRA +FLGYP QKG+KVL L++ +
Sbjct: 226 QVLFGSLPDYSHLKSFGSLCFVSTLTRHRDKLMPRAIPGVFLGYPFAQKGYKVLNLQTSQ 285
Query: 1398 VFVSRDIKFYEDHYPFA 1448
V VSRD+KF+E +PF+
Sbjct: 286 VIVSRDVKFFESIFPFS 302
Score = 107 bits (266), Expect(3) = 2e-59
Identities = 52/107 (48%), Positives = 70/107 (65%), Gaps = 2/107 (1%)
Frame = +2
Query: 602 HVRLGDFPFSVMKSLNFIHFP*NSDCI--CHVCPKAR*SRLPFPSSAIKTQRIFELIHIN 775
H RLG PF MK++ + ++ C +CP AR S+ PFPSS IK+++ FELIHI+
Sbjct: 17 HFRLGHLPFHAMKTIKTLPVTVDNKQTFPCDICPMARQSKPPFPSSTIKSKQCFELIHID 76
Query: 776 TRGPFKVSTYSGYSYFLTAVADYNRGTWTFLLKTKCNAFSVFKDFIA 916
T GP+ V TY G YFLT V D++R TWT+LL TK NAF+ K ++
Sbjct: 77 TWGPYNVPTYKGERYFLTIVDDFSRATWTYLLTTKSNAFATLKSLLS 123
Score = 42.4 bits (98), Expect(3) = 2e-59
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = +1
Query: 916 KRQFELQVKRIRSDNTLELRRGS*EAAYLNSAGIMHERSCVAT 1044
+RQF +VK IRSDN EL G + +L S GI+H+ +CV T
Sbjct: 126 ERQFSSKVKIIRSDNAYELGSGVIPSEFLASLGIIHQTTCVGT 168
>ref|XP_004235138.1| PREDICTED: uncharacterized protein LOC101243773 [Solanum
lycopersicum]
Length = 957
Score = 134 bits (337), Expect(3) = 6e-58
Identities = 67/141 (47%), Positives = 90/141 (63%), Gaps = 1/141 (0%)
Frame = +3
Query: 1035 CGYT-QQNRVVERKHTHLLEVAKGLIFQSSLPIQYWGECILTATHLVNRLSPL*FYKESQ 1211
C YT QQN VVERKH +LLE A+ L+FQS LP++YWGEC+LTAT+++NRL P +
Sbjct: 749 CPYTPQQNGVVERKHKYLLETARSLLFQSKLPLRYWGECVLTATYIINRL-PTKLLQNKS 807
Query: 1212 PMKFFLANHPLIRT*DILGCLCYVSTLSHPRNKF*PRARECIFLGYPQTQKGFKVLELES 1391
P + P GCLC+ + L ++KF PR IF+GYP KG+KVL L +
Sbjct: 808 PYEILYLKQPTYSHLKSFGCLCFPTVLKTHKDKFEPRTIPHIFVGYPFNTKGYKVLNLAT 867
Query: 1392 RKVFVSRDIKFYEDHYPFATV 1454
+KV +SRD+ F+E +PF V
Sbjct: 868 KKVHISRDVVFHERMFPFVHV 888
Score = 108 bits (269), Expect(3) = 6e-58
Identities = 78/242 (32%), Positives = 111/242 (45%), Gaps = 13/242 (5%)
Frame = +2
Query: 230 LILHNVLYVLDVKYNLLSVYRFT-QLQCHILFTLTGYVLQDLSMKKAQIFGEVGDGLYLL 406
L L VL+V K+NL+SV+ QL I F +LQ S+K G+ +GLY L
Sbjct: 467 LTLSKVLFVPSFKFNLISVHCLALQLNVVISFDKFSCLLQGPSLKSPVDLGKAKNGLYFL 526
Query: 407 --------KPTKIESSFFNXXXXXXXXXXXXXXXXXXRSYLQNVXXXXXXXXXXXXXXXA 562
K + +SS N + +
Sbjct: 527 CQKCHNCCKSAQEKSSHSNCHLVSKFHNVSSVRQSQNSTANKADCKTMSSSHSNDKCLSF 586
Query: 563 HFLANATPNVS--L*HVRLGDFPFSVMKSLNFI--HFP*NSDCICHVCPKAR*SRLPFPS 730
+++ T N L H RLG PF M+++ I +F C++CP AR +R+PFP
Sbjct: 587 ADVSSHTYNDDELLWHARLGHVPFVKMRNITSIPVNFSPKQPFTCNICPMARQTRMPFPE 646
Query: 731 SAIKTQRIFELIHINTRGPFKVSTYSGYSYFLTAVADYNRGTWTFLLKTKCNAFSVFKDF 910
S T + FEL+H++ GP+ + T+ GY YFLT V DYNR TWT LL+ K NA K F
Sbjct: 647 STSITTKTFELLHVDLWGPYHIPTHDGYHYFLTMVDDYNRSTWTQLLRCKSNALQTIKAF 706
Query: 911 IA 916
++
Sbjct: 707 VS 708
Score = 32.3 bits (72), Expect(3) = 6e-58
Identities = 16/43 (37%), Positives = 26/43 (60%)
Frame = +1
Query: 916 KRQFELQVKRIRSDNTLELRRGS*EAAYLNSAGIMHERSCVAT 1044
+ QF+ ++K IRSDN LE S + + GI+H+++C T
Sbjct: 711 ENQFQTKLKAIRSDNGLEF-TSSEAVHFFQTKGIIHQKTCPYT 752
>ref|XP_004252107.1| PREDICTED: uncharacterized protein LOC101259219 [Solanum
lycopersicum]
Length = 986
Score = 131 bits (329), Expect(2) = 9e-57
Identities = 67/138 (48%), Positives = 87/138 (63%), Gaps = 1/138 (0%)
Frame = +3
Query: 1035 CGYT-QQNRVVERKHTHLLEVAKGLIFQSSLPIQYWGECILTATHLVNRLSPL*FYKESQ 1211
C YT QQN VVERKH +LLE A+ L+FQS LP++YWGEC+LTAT+L+NRL P +
Sbjct: 750 CPYTPQQNGVVERKHKYLLETARALLFQSKLPMRYWGECVLTATYLINRL-PTKLLQGKS 808
Query: 1212 PMKFFLANHPLIRT*DILGCLCYVSTLSHPRNKF*PRARECIFLGYPQTQKGFKVLELES 1391
P + P GCLC+ +TL + KF PR IF+GYP KG+KVL L +
Sbjct: 809 PYELLYQKKPFYSHLKNFGCLCFPTTLKTHKEKFEPRTVPHIFIGYPFNTKGYKVLNLAT 868
Query: 1392 RKVFVSRDIKFYEDHYPF 1445
+++ V RD+ FYE PF
Sbjct: 869 KRIHVFRDVFFYETILPF 886
Score = 118 bits (296), Expect(2) = 9e-57
Identities = 80/244 (32%), Positives = 115/244 (47%), Gaps = 8/244 (3%)
Frame = +2
Query: 209 EVFLFYTLILHNVLYVLDVKYNLLSVYRFT-QLQCHILFTLTGYVLQDLSMKKAQIFGEV 385
+V L TLIL+ VLY+ K+NL+SV QL+ + F +LQ S+K G+
Sbjct: 467 DVCLNPTLILYKVLYIPSFKFNLISVCCLANQLRGMVSFNSDSCLLQGPSLKSPLALGKA 526
Query: 386 GDGLYLLK-----PTKIESSFFNXXXXXXXXXXXXXXXXXXRSYLQNVXXXXXXXXXXXX 550
+GLY P+ + + + ++
Sbjct: 527 RNGLYFFCSKCHIPSVNDDIVSHQKCQSVSLLNYCKTPSPSSTKHPHIINKETCSTDHTP 586
Query: 551 XXXAHFLANATPNVSL*HVRLGDFPFSVMKSLNFI--HFP*NSDCICHVCPKAR*SRLPF 724
HF + + N L H RLG PF MKS++ I F C +CP AR +R+PF
Sbjct: 587 NSATHF-SFSQDNEFLWHARLGHVPFVKMKSISTIPLKFSNKQPFTCTICPMARQTRMPF 645
Query: 725 PSSAIKTQRIFELIHINTRGPFKVSTYSGYSYFLTAVADYNRGTWTFLLKTKCNAFSVFK 904
P S +T IFEL+H++ GP+ V T+ GY YFLT V DY+R TWT L++ K NA K
Sbjct: 646 PESTTRTSSIFELLHVDLWGPYNVPTHDGYHYFLTMVDDYSRATWTQLIRCKSNALHTIK 705
Query: 905 DFIA 916
F++
Sbjct: 706 AFVS 709
>ref|XP_004240277.1| PREDICTED: uncharacterized protein LOC101248781 [Solanum
lycopersicum]
Length = 729
Score = 127 bits (320), Expect(3) = 2e-55
Identities = 65/138 (47%), Positives = 86/138 (62%), Gaps = 1/138 (0%)
Frame = +3
Query: 1035 CGYT-QQNRVVERKHTHLLEVAKGLIFQSSLPIQYWGECILTATHLVNRLSPL*FYKESQ 1211
C YT QQN VVE KH +LLE A+ L+FQS +P++YWGE +LTAT+L+NRL P
Sbjct: 407 CPYTPQQNGVVEMKHKYLLETARALLFQSKIPVRYWGEYVLTATYLINRL-PTKLLPGKS 465
Query: 1212 PMKFFLANHPLIRT*DILGCLCYVSTLSHPRNKF*PRARECIFLGYPQTQKGFKVLELES 1391
P + P GCLC+ +TL ++KF PR IF+GYP KG+KVL L +
Sbjct: 466 PYELLYQKKPFYSHLKNFGCLCFPTTLKTHKDKFEPRTVPHIFIGYPFNTKGYKVLNLAT 525
Query: 1392 RKVFVSRDIKFYEDHYPF 1445
+++ VSRD+ FYE PF
Sbjct: 526 KRIHVSRDVSFYETILPF 543
Score = 105 bits (262), Expect(3) = 2e-55
Identities = 55/121 (45%), Positives = 73/121 (60%), Gaps = 2/121 (1%)
Frame = +2
Query: 560 AHFLANATPNVSL*HVRLGDFPFSVMKSLNFI--HFP*NSDCICHVCPKAR*SRLPFPSS 733
AHF + + N L H RLG PF MK+++ I F C +CP AR +R+PFP S
Sbjct: 247 AHF-SFSQDNEFLWHARLGHVPFVKMKNISTIPLKFSNKQPFTCTICPMARQTRMPFPES 305
Query: 734 AIKTQRIFELIHINTRGPFKVSTYSGYSYFLTAVADYNRGTWTFLLKTKCNAFSVFKDFI 913
+T IFEL+H++ GP+ V T+ GY YFLT V DY+R TWT L++ K NA K FI
Sbjct: 306 VTRTSSIFELLHVDLWGPYNVPTHDGYHYFLTMVDDYSRATWTQLIRCKSNALHTIKAFI 365
Query: 914 A 916
+
Sbjct: 366 S 366
Score = 32.7 bits (73), Expect(3) = 2e-55
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +1
Query: 916 KRQFELQVKRIRSDNTLELRRGS*EAAYLNSAGIMHERSCVAT 1044
+ QF+ ++K IRSDN LE + + GI+H++SC T
Sbjct: 369 ENQFQTRLKTIRSDNGLEF-TSTEATCFFQEKGIIHQKSCPYT 410
>ref|XP_004239452.1| PREDICTED: uncharacterized protein LOC101259633 [Solanum
lycopersicum]
Length = 1105
Score = 124 bits (312), Expect(3) = 7e-55
Identities = 64/139 (46%), Positives = 88/139 (63%), Gaps = 1/139 (0%)
Frame = +3
Query: 1035 CGYT-QQNRVVERKHTHLLEVAKGLIFQSSLPIQYWGECILTATHLVNRLSPL*FYKESQ 1211
C YT QQN +VERKH +LLE A+ L+FQS LP +YWG+CILT+T+L+NR+ P F +
Sbjct: 745 CPYTPQQNSIVERKHRYLLETARALLFQSKLPTKYWGDCILTSTYLINRI-PSTFLQNKC 803
Query: 1212 PMKFFLANHPLIRT*DILGCLCYVSTLSHPRNKF*PRARECIFLGYPQTQKGFKVLELES 1391
P + P GCLCY + R+K PR IF+GYP KG+KV+ L +
Sbjct: 804 PYEMLYKEKPKYSQLRSFGCLCYPTLPKVHRDKL-PRTTPHIFIGYPSGIKGYKVMSLAT 862
Query: 1392 RKVFVSRDIKFYEDHYPFA 1448
K+ +SRD+ F+ED +PF+
Sbjct: 863 SKIQISRDVIFHEDIFPFS 881
Score = 107 bits (267), Expect(3) = 7e-55
Identities = 79/250 (31%), Positives = 115/250 (46%), Gaps = 15/250 (6%)
Frame = +2
Query: 209 EVFLFYTLILHNVLYVLDVKYNLLSVYRF-TQLQCHILFTLTGYVLQDLSMKKAQIFGEV 385
+V + +IL+ VL+V K+NL+ V + ++C I F+ T +LQ L +K+ + G
Sbjct: 455 DVHITPKMILNKVLHVPSFKHNLILVQSLVSSMKCIISFSDTTCLLQALLVKRPKAIGSS 514
Query: 386 GDGLYL-----LKPTKIESSFFNXXXXXXXXXXXXXXXXXXRSYLQNVXXXXXXXXXXXX 550
DG+Y LK + S++ N
Sbjct: 515 KDGIYYMCGRCLKNATQSTDLVCSCITHVCRSIPFQSPVCNDSFVDN-SNKLPVRPVCSS 573
Query: 551 XXXAHFLANATPNVSL*-------HVRLGDFPFSVMKSLNFI--HFP*NSDCICHVCPKA 703
+ L+N SL H RLG PF MK++ I F C +CP A
Sbjct: 574 TENTNVLSNCASLESLKDDVDLLWHNRLGHVPFVKMKTIPTIPVKFSARQPFTCTICPMA 633
Query: 704 R*SRLPFPSSAIKTQRIFELIHINTRGPFKVSTYSGYSYFLTAVADYNRGTWTFLLKTKC 883
R +RLPF S ++ IF+L+H+N GP+ V TY+ YF+T V DY+R TWT+LL TK
Sbjct: 634 RQTRLPFTHSTTHSKSIFDLLHVNLWGPYHVPTYNNCRYFITLVDDYSRATWTYLLSTKS 693
Query: 884 NAFSVFKDFI 913
NA V + FI
Sbjct: 694 NAIQVLQTFI 703
Score = 32.3 bits (72), Expect(3) = 7e-55
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +1
Query: 916 KRQFELQVKRIRSDNTLELRRGS*EAAYLNSAGIMHERSCVAT 1044
+ QF+ VK IRSDN LE + + GI H++SC T
Sbjct: 707 ENQFQTNVKCIRSDNGLEFNNNE-ILRFFQAKGITHQKSCPYT 748
>ref|XP_004231364.1| PREDICTED: uncharacterized protein LOC101245809 [Solanum
lycopersicum]
Length = 1094
Score = 132 bits (333), Expect(3) = 4e-53
Identities = 73/158 (46%), Positives = 95/158 (60%), Gaps = 1/158 (0%)
Frame = +3
Query: 1035 CGYT-QQNRVVERKHTHLLEVAKGLIFQSSLPIQYWGECILTATHLVNRLSPL*FYKESQ 1211
C YT QQN VVERKH HLLE A+ L+FQS LP++YWGECIL AT+++NRL P +
Sbjct: 680 CPYTPQQNGVVERKHKHLLETARALLFQSKLPVKYWGECILCATYIINRL-PSTVLNQKC 738
Query: 1212 PMKFFLANHPLIRT*DILGCLCYVSTLSHPRNKF*PRARECIFLGYPQTQKGFKVLELES 1391
P + PL GCLCY + R KF PR IF+GYP KG+KVL + +
Sbjct: 739 PYEVLYFRKPLYSHMRSFGCLCYPTVPIPHRAKFEPRTTPHIFIGYPHETKGYKVLSMST 798
Query: 1392 RKVFVSRDIKFYEDHYPFATVATHNTTTHRFSF*CASH 1505
K+ V RD+ F+E+ +PF+ + NTT FS + H
Sbjct: 799 GKIHVCRDVIFHENVFPFSD-SFSNTTGSPFSLLQSPH 835
Score = 92.4 bits (228), Expect(3) = 4e-53
Identities = 46/106 (43%), Positives = 61/106 (57%), Gaps = 2/106 (1%)
Frame = +2
Query: 602 HVRLGDFPFSVMKSLNFI--HFP*NSDCICHVCPKAR*SRLPFPSSAIKTQRIFELIHIN 775
H RLG PF M++++ I F +C +CP AR RLPF T IFEL+H++
Sbjct: 533 HNRLGHVPFVKMRNISSIPVKFSAKQPFMCSICPMARQERLPFKPRTTLTSHIFELLHVD 592
Query: 776 TRGPFKVSTYSGYSYFLTAVADYNRGTWTFLLKTKCNAFSVFKDFI 913
GP+ TY+ + YF+T V D++R TWT LL TK NA K FI
Sbjct: 593 LWGPYSTPTYNHFKYFMTIVDDFSRATWTQLLSTKSNALQNLKSFI 638
Score = 33.5 bits (75), Expect(3) = 4e-53
Identities = 16/43 (37%), Positives = 26/43 (60%)
Frame = +1
Query: 916 KRQFELQVKRIRSDNTLELRRGS*EAAYLNSAGIMHERSCVAT 1044
+ QFE+ VK+IR+DN LE + + GI+H+++C T
Sbjct: 642 ENQFEVTVKKIRTDNGLEFVNTE-STNFFKTKGIVHQKTCPYT 683
>gb|ACB45089.1| putative polyprotein [Solanum habrochaites]
Length = 849
Score = 117 bits (292), Expect(3) = 1e-51
Identities = 57/138 (41%), Positives = 84/138 (60%), Gaps = 1/138 (0%)
Frame = +3
Query: 1035 CGYT-QQNRVVERKHTHLLEVAKGLIFQSSLPIQYWGECILTATHLVNRLSPL*FYKESQ 1211
C YT QQN VVER+H +LEVA+ + FQ++LPI++WG C+ A +L+NR+ P
Sbjct: 414 CVYTPQQNGVVERRHRQILEVARAIRFQANLPIRFWGLCVQNAVYLINRI-PSTALSGRS 472
Query: 1212 PMKFFLANHPLIRT*DILGCLCYVSTLSHPRNKF*PRARECIFLGYPQTQKGFKVLELES 1391
P F P + ++GCLCY +KF R+ + + +GY TQKG+K+ +L +
Sbjct: 473 PFAVFFGKEPSLHHLRVMGCLCYAVNHHTHGDKFDTRSIKSVLMGYSTTQKGYKLYDLST 532
Query: 1392 RKVFVSRDIKFYEDHYPF 1445
+ F+SRD+ F ED YPF
Sbjct: 533 QTFFISRDVTFREDQYPF 550
Score = 107 bits (266), Expect(3) = 1e-51
Identities = 74/232 (31%), Positives = 104/232 (44%), Gaps = 6/232 (2%)
Frame = +2
Query: 236 LHNVLYVLDVKYNLLSVYRFT-QLQCHILFTLTGYVLQDLSMKKAQIFGEVGDGLY---- 400
+ +VLY+ D KYNLLSV T +L C ++F +LQDL K + G + +GLY
Sbjct: 183 ISHVLYIPDFKYNLLSVSELTKELHCCMVFYPDHCILQDLHTVKVKGTGSMENGLYYWSH 242
Query: 401 LLKPTKIESSFFNXXXXXXXXXXXXXXXXXXRSYLQNVXXXXXXXXXXXXXXXAHFLANA 580
++ PT S +
Sbjct: 243 IVSPTVAYS------------------------------------------VSPSVALST 260
Query: 581 TPNVSL*HVRLGDFPFSVMKSLNFIHFP*NSDCI-CHVCPKAR*SRLPFPSSAIKTQRIF 757
+V L H RLG P V++ + H +S C +CP A+ +RLPFP S + +F
Sbjct: 261 LDDVDLWHRRLGHIPHKVLQQMQIPHISSSSKLTSCPICPLAKQTRLPFPQSPTRADNVF 320
Query: 758 ELIHINTRGPFKVSTYSGYSYFLTAVADYNRGTWTFLLKTKCNAFSVFKDFI 913
+LIH + GP+K T+ G YFLT V D +R W FLLK K + F V KDF+
Sbjct: 321 DLIHADVWGPYKFPTHDGNRYFLTLVDDCSRMIWIFLLKYKSDVFIVLKDFL 372
Score = 29.3 bits (64), Expect(3) = 1e-51
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +1
Query: 916 KRQFELQVKRIRSDNTLELRRGS*EAAYLNSAGIMHERSCVAT 1044
+RQF +K RSDN E + +AGI+H+ SCV T
Sbjct: 376 QRQFGGYIKIFRSDNGTEFFNSHCSELF-RTAGIVHQSSCVYT 417
>ref|XP_004240625.1| PREDICTED: uncharacterized protein LOC101261123 [Solanum
lycopersicum]
Length = 943
Score = 112 bits (281), Expect(3) = 6e-51
Identities = 74/232 (31%), Positives = 112/232 (48%), Gaps = 3/232 (1%)
Frame = +2
Query: 233 ILHNVLYVLDVKYNLLSVYRFTQ-LQCHILFTLTGYVLQDLSMKKAQIFGEVGDGLYLLK 409
+L VL V K+NLLSV + T+ L C + F + VLQDL K ++ G+ DGLY
Sbjct: 443 VLRRVLCVPAFKFNLLSVSQMTKDLNCCVTFYPSCCVLQDLGSGKVRMIGKEEDGLY--- 499
Query: 410 PTKIESSFFNXXXXXXXXXXXXXXXXXXRSYLQNVXXXXXXXXXXXXXXXAHFLANATPN 589
+F++ Y N + + N
Sbjct: 500 ------TFYSQPG----------------QYDHNKMLQPHHCMTT--------IQSVEAN 529
Query: 590 VSL*HVRLGDFPFSVMKSLNFIHFP*NSDCI--CHVCPKAR*SRLPFPSSAIKTQRIFEL 763
++ H RLG P V++ ++ H N + C +CP AR +RLPFP S + +F+L
Sbjct: 530 ANIWHQRLGHVPMGVIRKISSFHKFGNKFALHKCDICPLARQTRLPFPHSTSSSTCVFQL 589
Query: 764 IHINTRGPFKVSTYSGYSYFLTAVADYNRGTWTFLLKTKCNAFSVFKDFIAK 919
+H++ GP++V TY G YF T V DY+R TWTFL++ K + S+ K F+A+
Sbjct: 590 LHMDVWGPYRVETYDGMRYFFTIVDDYSRWTWTFLMRLKSDVVSLLKQFVAE 641
Score = 110 bits (275), Expect(3) = 6e-51
Identities = 53/138 (38%), Positives = 87/138 (63%), Gaps = 1/138 (0%)
Frame = +3
Query: 1035 CGYT-QQNRVVERKHTHLLEVAKGLIFQSSLPIQYWGECILTATHLVNRLSPL*FYKESQ 1211
C YT QQN V+ER+H H+LE A+ + FQ+ P ++WG CI ATH++N++ S
Sbjct: 681 CPYTPQQNGVMERRHRHILETARAIKFQAGFPDKFWGLCIHAATHVLNKIPSTTLGNVSS 740
Query: 1212 PMKFFLANHPLIRT*DILGCLCYVSTLSHPRNKF*PRARECIFLGYPQTQKGFKVLELES 1391
+ + PL+ ++GC+C+ + ++ +KF PRA + +GY TQKG+K+ +LE+
Sbjct: 741 FERLY-GRPPLLDYMRVIGCMCFATNIT-THDKFSPRAIRAVLMGYGTTQKGYKLYDLEN 798
Query: 1392 RKVFVSRDIKFYEDHYPF 1445
++ F+SRD+ F E +PF
Sbjct: 799 KRFFISRDVTFLETVFPF 816
Score = 28.1 bits (61), Expect(3) = 6e-51
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +1
Query: 922 QFELQVKRIRSDNTLELRRGS*EAAYLNSAGIMHERSCVAT 1044
QF+ ++KRIR DN E + + + GI+HE SC T
Sbjct: 645 QFDKRIKRIRYDNGTEFFNTNCDDLF-KLHGIIHESSCPYT 684
>ref|XP_004228785.1| PREDICTED: uncharacterized protein LOC101255821 [Solanum
lycopersicum]
Length = 1125
Score = 130 bits (328), Expect(2) = 1e-50
Identities = 65/141 (46%), Positives = 89/141 (63%), Gaps = 1/141 (0%)
Frame = +3
Query: 1035 CGYT-QQNRVVERKHTHLLEVAKGLIFQSSLPIQYWGECILTATHLVNRLSPL*FYKESQ 1211
C YT QQN VVERKH +LLE A+ L+FQS LP++YWGEC+LTA +++NRL P +
Sbjct: 756 CPYTPQQNGVVERKHKYLLETARALLFQSKLPLRYWGECVLTAIYIINRL-PTKLLQNKS 814
Query: 1212 PMKFFLANHPLIRT*DILGCLCYVSTLSHPRNKF*PRARECIFLGYPQTQKGFKVLELES 1391
P + P GCLC+ + L ++KF PR +F+GYP KG+KVL L +
Sbjct: 815 PYETLYLKQPTYSHLKSFGCLCFPTVLKTHKDKFEPRGIPHVFVGYPFNTKGYKVLNLAT 874
Query: 1392 RKVFVSRDIKFYEDHYPFATV 1454
+KV +SRD+ F+E +PF V
Sbjct: 875 KKVHISRDVVFHERMFPFVHV 895
Score = 98.6 bits (244), Expect(2) = 1e-50
Identities = 76/242 (31%), Positives = 110/242 (45%), Gaps = 13/242 (5%)
Frame = +2
Query: 230 LILHNVLYVLDVKYNLLSVYRFT-QLQCHILFTLTGYVLQDLSMKKAQIFGEVGDGLYLL 406
L L VL+V K+NL+SV+ QL I F +LQ S+K G+ +GLY L
Sbjct: 474 LTLSKVLFVPSFKFNLISVHCLALQLNGVISFDKFSCLLQGPSLKSPLELGKAKNGLYFL 533
Query: 407 --------KPTKIESSFFNXXXXXXXXXXXXXXXXXXRSYLQNVXXXXXXXXXXXXXXXA 562
K T+ +SS N + +
Sbjct: 534 CQKCHNCYKSTEEKSSHSNCHLVSKFHSVSSVRQSQTSTANKADCKTMSSSHSNDKCLSF 593
Query: 563 HFLANATPNVS--L*HVRLGDFPFSVMKSLNFI--HFP*NSDCICHVCPKAR*SRLPFPS 730
+++ T N L H RLG PF M+++ I + C++CP AR +R+PF
Sbjct: 594 VDVSSQTYNDDELLWHTRLGHVPFVKMRNITSIPVNVSPKQPFTCNICPMARQTRMPFQE 653
Query: 731 SAIKTQRIFELIHINTRGPFKVSTYSGYSYFLTAVADYNRGTWTFLLKTKCNAFSVFKDF 910
S T +IFEL+H++ GP+ + T+ GY YFLT V DY+R T T LL+ K NA K F
Sbjct: 654 STSITTKIFELLHVDLWGPYHIPTHDGYHYFLTMVDDYSRSTCTQLLRCKSNALQTIKAF 713
Query: 911 IA 916
++
Sbjct: 714 VS 715
>gb|AAF79879.1|AC000348_32 T7N9.5 [Arabidopsis thaliana]
Length = 1436
Score = 138 bits (347), Expect(2) = 3e-49
Identities = 68/136 (50%), Positives = 90/136 (66%), Gaps = 1/136 (0%)
Frame = +3
Query: 1047 QQNRVVERKHTHLLEVAKGLIFQSSLPIQYWGECILTATHLVNRL-SPL*FYKESQPMKF 1223
+QN VVERKH HLL VA+ L+FQS +P++YWG+C+LTA L+NRL SP+ P +
Sbjct: 711 EQNFVVERKHQHLLNVARALMFQSGIPLEYWGDCVLTAVFLINRLLSPV--INNETPYER 768
Query: 1224 FLANHPLIRT*DILGCLCYVSTLSHPRNKF*PRARECIFLGYPQTQKGFKVLELESRKVF 1403
P + GCLCY ST R KF PRA+ CIFLGYP KG+K+L++E+ V
Sbjct: 769 LTKGKPDYSSLKAFGCLCYCSTSPKSRTKFDPRAKACIFLGYPMGYKGYKLLDIETYSVS 828
Query: 1404 VSRDIKFYEDHYPFAT 1451
+SR + FYED +PFA+
Sbjct: 829 ISRHVIFYEDIFPFAS 844
Score = 86.7 bits (213), Expect(2) = 3e-49
Identities = 73/244 (29%), Positives = 107/244 (43%), Gaps = 9/244 (3%)
Frame = +2
Query: 230 LILHNVLYVLDVKYNLLSVYRFTQ-LQCHILFTLTGYVLQDLSMKKAQIFGEVGDGLYLL 406
L LHNVL++ + K+NLLSV T+ LQ + FT ++Q L+ + G LY+L
Sbjct: 471 LSLHNVLFIPEFKFNLLSVSVLTKTLQSKVSFTSDECMIQALTKELMLGKGSQVGNLYIL 530
Query: 407 KPTK--IESSFFNXXXXXXXXXXXXXXXXXXRSYLQNVXXXXXXXXXXXXXXXAHFLANA 580
K ++ S F + ++
Sbjct: 531 NLDKSLVDVSSF----------------------------------------PGKSVCSS 550
Query: 581 TPNVS-L*HVRLGDFPFSVMKSLNFIHF----P*NSDCI-CHVCPKAR*SRLPFPSSAIK 742
N S + H RLG F+ + +L+ + N D CHVC ++ LPF S
Sbjct: 551 VKNESEMWHKRLGHPSFAKIDTLSDVLMLPKQKINKDSSHCHVCHLSKQKHLPFKSVNHI 610
Query: 743 TQRIFELIHINTRGPFKVSTYSGYSYFLTAVADYNRGTWTFLLKTKCNAFSVFKDFIAKD 922
++ FEL+HI+T GPF V T Y YFLT V D++R TW +LLK K + +VF F+
Sbjct: 611 REKAFELVHIDTWGPFSVPTVDSYRYFLTIVDDFSRATWIYLLKQKSDVLTVFPSFLKMV 670
Query: 923 NLSY 934
Y
Sbjct: 671 ETQY 674
>emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]
Length = 1813
Score = 140 bits (354), Expect(2) = 8e-49
Identities = 67/138 (48%), Positives = 96/138 (69%), Gaps = 1/138 (0%)
Frame = +3
Query: 1035 CGYT-QQNRVVERKHTHLLEVAKGLIFQSSLPIQYWGECILTATHLVNRLSPL*FYKESQ 1211
C YT QQN VVERKH H+L VA+ L+FQS++P+++WGEC+LTA +L+NR+ P
Sbjct: 916 CIYTPQQNGVVERKHRHILNVARSLMFQSNVPLEFWGECVLTAVYLINRI-PTPLLSNKS 974
Query: 1212 PMKFFLANHPLIRT*DILGCLCYVSTLSHPRNKF*PRARECIFLGYPQTQKGFKVLELES 1391
P + P + + GC CYV+ + HP+ KF PRA C+FLGYP +KG+KVL+L++
Sbjct: 975 PFEVLYNRPPSLTHLRVFGCECYVTNV-HPKQKFDPRASICVFLGYPHGKKGYKVLDLQT 1033
Query: 1392 RKVFVSRDIKFYEDHYPF 1445
+K+ VSRD+ F E+ +PF
Sbjct: 1034 QKISVSRDVFFRENIFPF 1051
Score = 82.4 bits (202), Expect(2) = 8e-49
Identities = 67/231 (29%), Positives = 103/231 (44%), Gaps = 3/231 (1%)
Frame = +2
Query: 230 LILHNVLYVLDVKYNLLSVYRFTQLQ-CHILFTLTGYVLQDLSMKKAQIFGEVGDGLYLL 406
L L +VL V NL+S + + Q C+I+F +LQDL K G+ GLY +
Sbjct: 692 LTLKDVLCVPSFNLNLISASKLAKDQNCYIIFFPDYCILQDLVSGKMIGSGKQRGGLYYM 751
Query: 407 KPTKIESSFFNXXXXXXXXXXXXXXXXXXRSYLQNVXXXXXXXXXXXXXXXAHFLANATP 586
P+ +S F+ + P
Sbjct: 752 HPSTNKSVVFHV---------------------------------------------SQP 766
Query: 587 NVSL*HVRLGDFPFSVMKSLNFIHFP*NSDC--ICHVCPKAR*SRLPFPSSAIKTQRIFE 760
+ L H+RLG FS K L+ + + + C +CP+A+ +RLPFP S+I T+ F
Sbjct: 767 S-DLWHLRLGHPSFSRFKLLSRLLPDIHKEIGNHCPICPQAKQTRLPFPKSSITTKFPFS 825
Query: 761 LIHINTRGPFKVSTYSGYSYFLTAVADYNRGTWTFLLKTKCNAFSVFKDFI 913
L+H + GP K+ ++G YFLT V D++R TW FL+ K S+ +F+
Sbjct: 826 LLHCDVWGPHKIPAHTGSRYFLTIVDDFSRCTWIFLMHHKSETQSLLTNFV 876
>gb|AAD41979.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1264
Score = 127 bits (319), Expect(3) = 2e-48
Identities = 61/134 (45%), Positives = 84/134 (62%)
Frame = +3
Query: 1047 QQNRVVERKHTHLLEVAKGLIFQSSLPIQYWGECILTATHLVNRLSPL*FYKESQPMKFF 1226
+QN VVERKH H+L VA+ L+FQS +P+ WGEC+LTA L+NR +P P +
Sbjct: 569 EQNSVVERKHQHILNVARALMFQSQVPLFLWGECVLTAVFLINR-TPSQLLSNKTPYEIL 627
Query: 1227 LANHPLIRT*DILGCLCYVSTLSHPRNKF*PRARECIFLGYPQTQKGFKVLELESRKVFV 1406
P GCLCY ST R+KF PR++ CIFLGY KG+K+++LES +F+
Sbjct: 628 SGTAPQYGQLRTFGCLCYSSTSPKQRHKFQPRSKACIFLGYSSGYKGYKLMDLESNAIFI 687
Query: 1407 SRDIKFYEDHYPFA 1448
SR++ F E+ +P A
Sbjct: 688 SRNVVFLEEVFPLA 701
Score = 87.4 bits (215), Expect(3) = 2e-48
Identities = 48/125 (38%), Positives = 64/125 (51%), Gaps = 4/125 (3%)
Frame = +2
Query: 575 NATPNVSL*HVRLGDFPFS----VMKSLNFIHFP*NSDCICHVCPKAR*SRLPFPSSAIK 742
NA ++S H RL + +SL CHVC A+ +L FPS
Sbjct: 409 NAVVDISTWHNRLRHASLQRLDVISESLGTTKHKNKGSDYCHVCHLAKHRKLSFPSQNNV 468
Query: 743 TQRIFELIHINTRGPFKVSTYSGYSYFLTAVADYNRGTWTFLLKTKCNAFSVFKDFIAKD 922
IFE++HI+ GPF V T GY YFLT V D++R TW +LLKTK ++F DFI +
Sbjct: 469 CNEIFEMLHIDIWGPFSVETVDGYQYFLTIVDDHSRATWIYLLKTKSEVLTIFHDFIQQV 528
Query: 923 NLSYR 937
Y+
Sbjct: 529 ENQYK 533
Score = 27.7 bits (60), Expect(3) = 2e-48
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +1
Query: 916 KRQFELQVKRIRSDNTLELRRGS*EAAYLNSAGIMHERSCVAT 1044
+ Q++++VK +RSDN ELR S GIM SC T
Sbjct: 529 ENQYKVKVKAVRSDNAPELRFTS----LYQRKGIMAFHSCPET 567
>emb|CAN76546.1| hypothetical protein VITISV_010420 [Vitis vinifera]
Length = 1288
Score = 124 bits (310), Expect(3) = 9e-48
Identities = 61/123 (49%), Positives = 81/123 (65%)
Frame = +3
Query: 1047 QQNRVVERKHTHLLEVAKGLIFQSSLPIQYWGECILTATHLVNRLSPL*FYKESQPMKFF 1226
QQN VVERKH H+L VA+ L+F SSLP+ YW +CILTA +L+NR +P F P +
Sbjct: 566 QQNSVVERKHQHILNVARALLFXSSLPVCYWSDCILTAVYLINR-TPSPFLNNKTPFEIL 624
Query: 1227 LANHPLIRT*DILGCLCYVSTLSHPRNKF*PRARECIFLGYPQTQKGFKVLELESRKVFV 1406
P + GCLCYVSTL R KF PRA+ +FLGYP KG+K+L++E+R + +
Sbjct: 625 HDKLPDYSHLRVFGCLCYVSTLKANRTKFSPRAKAAVFLGYPFGFKGYKLLDIETRSISI 684
Query: 1407 SRD 1415
SR+
Sbjct: 685 SRN 687
Score = 79.3 bits (194), Expect(3) = 9e-48
Identities = 72/241 (29%), Positives = 100/241 (41%), Gaps = 6/241 (2%)
Frame = +2
Query: 212 VFLFYTLILHNVLYVLDVKYNLLSVYRFTQ-LQCHILFTLTGYVLQDLSMKKAQIFGEVG 388
V L + L NVL+V +YNLLSV FT L ++FT ++Q+ S K G
Sbjct: 325 VILSKDVKLLNVLFVPTFRYNLLSVSAFTDTLSLSMVFTPDACIIQEPSRGKMIGKGSRK 384
Query: 389 DGLYLLKPTKIESSFFNXXXXXXXXXXXXXXXXXXRSYLQNVXXXXXXXXXXXXXXXAHF 568
LY L + A
Sbjct: 385 GQLYQLDFDSFVAD------------------------------------------KAFV 402
Query: 569 LANATPN---VSL*HVRLGDFPFSVMKSL-NFIHFP*NSDCI-CHVCPKAR*SRLPFPSS 733
A+ P +SL H RLG FS +K L + + F + D C+VCP A+ LP+ S
Sbjct: 403 AASRIPTSNILSLWHSRLGHPSFSRLKGLQSVLDFDSSFDLTPCNVCPLAKQRCLPYISL 462
Query: 734 AIKTQRIFELIHINTRGPFKVSTYSGYSYFLTAVADYNRGTWTFLLKTKCNAFSVFKDFI 913
+ F+L+H++ GPF V + GY +FLT V DY+R TW ++LK K DF
Sbjct: 463 NKRCSSTFDLLHLDIWGPFSVGSVEGYKFFLTIVDDYSRVTWVYMLKNKSEVQKYIPDFF 522
Query: 914 A 916
A
Sbjct: 523 A 523
Score = 37.4 bits (85), Expect(3) = 9e-48
Identities = 23/52 (44%), Positives = 30/52 (57%)
Frame = +1
Query: 889 FFCFQRFHSKRQFELQVKRIRSDNTLELRRGS*EAAYLNSAGIMHERSCVAT 1044
FF F K+QF +VK IRSDN EL + + +S G++H RSCV T
Sbjct: 521 FFAFV----KKQFGKEVKAIRSDNAPELFLSN----FYHSLGVIHYRSCVET 564
>emb|CAN62906.1| hypothetical protein VITISV_043610 [Vitis vinifera]
Length = 1498
Score = 129 bits (324), Expect(3) = 1e-47
Identities = 66/147 (44%), Positives = 94/147 (63%), Gaps = 2/147 (1%)
Frame = +3
Query: 1035 CGYT-QQNRVVERKHTHLLEVAKGLIFQSSLPIQYWGECILTATHLVNRL-SPL*FYKES 1208
C YT QQN VVERKH H+L+VA+ L F + +P Q+WGEC LTA H++NRL SP+ +K
Sbjct: 665 CVYTPQQNGVVERKHRHILQVARALKFHAQVPTQFWGECALTAVHIINRLXSPILSFK-- 722
Query: 1209 QPMKFFLANHPLIRT*DILGCLCYVSTLSHPRNKF*PRARECIFLGYPQTQKGFKVLELE 1388
P + P + GCL Y + + H +KF RA IF+GYP QK +K+ +L
Sbjct: 723 TPFELLYLKSPXYSHLRVFGCLAYATNV-HTSHKFDYRAMPSIFIGYPVGQKAYKLFDLS 781
Query: 1389 SRKVFVSRDIKFYEDHYPFATVATHNT 1469
++KVF SRD+KF+ED +P+ ++ + T
Sbjct: 782 TKKVFTSRDVKFHEDIFPYVSLKPNXT 808
Score = 82.8 bits (203), Expect(3) = 1e-47
Identities = 68/228 (29%), Positives = 95/228 (41%), Gaps = 1/228 (0%)
Frame = +2
Query: 236 LHNVLYVLDVKYNLLSVYRFTQ-LQCHILFTLTGYVLQDLSMKKAQIFGEVGDGLYLLKP 412
LH+VL V K +L+SV R T+ L C + F +LQDL+ ++ G+ D LY L
Sbjct: 450 LHDVLSVPTFKVDLISVSRLTKGLNCSVTFFPYWCILQDLATRRTIGLGKQRDRLYYLVA 509
Query: 413 TKIESSFFNXXXXXXXXXXXXXXXXXXRSYLQNVXXXXXXXXXXXXXXXAHFLANATPNV 592
E S N A +
Sbjct: 510 LATEKSLTNHSSSTNQPACNL----------------------------------AISST 535
Query: 593 SL*HVRLGDFPFSVMKSLNFIHFP*NSDCICHVCPKAR*SRLPFPSSAIKTQRIFELIHI 772
L H RLG +S+ C +CP A+ SRLPF +SAI + + FE+IH
Sbjct: 536 DLWHSRLG-----------------HSNNACPICPLAKQSRLPFGTSAISSTKPFEIIHC 578
Query: 773 NTRGPFKVSTYSGYSYFLTAVADYNRGTWTFLLKTKCNAFSVFKDFIA 916
+ G ++ + G YFLT V DY R TW FL++ K A S+ K F +
Sbjct: 579 DIWGRYRHPSLFGAHYFLTIVDDYTRFTWIFLMRHKDEAQSLLKRFFS 626
Score = 28.1 bits (61), Expect(3) = 1e-47
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +1
Query: 922 QFELQVKRIRSDNTLELRRGS*EAAYLNSAGIMHERSCVAT 1044
QFE ++K RSDN E ++ G++ + SCV T
Sbjct: 631 QFEFRIKTFRSDNXXEFTS---LRSFFQDNGVIFQHSCVYT 668
>emb|CAN60374.1| hypothetical protein VITISV_001215 [Vitis vinifera]
Length = 1535
Score = 131 bits (330), Expect(2) = 4e-47
Identities = 67/141 (47%), Positives = 93/141 (65%), Gaps = 2/141 (1%)
Frame = +3
Query: 1035 CGYT-QQNRVVERKHTHLLEVAKGLIFQSSLPIQYWGECILTATHLVNRL-SPL*FYKES 1208
C YT QQN VVERKH H+L+VA+ L FQ+ LP Q+WGEC LTA H++NRL SP+ +K
Sbjct: 694 CVYTPQQNGVVERKHRHILQVARALKFQAQLPTQFWGECALTAVHIINRLPSPVLSFK-- 751
Query: 1209 QPMKFFLANHPLIRT*DILGCLCYVSTLSHPRNKF*PRARECIFLGYPQTQKGFKVLELE 1388
P + P + GCL Y + + H +KF RA CIF+GYP QK +K+ L
Sbjct: 752 TPFERLYLKPPTYSHLRVFGCLAYATNV-HVSHKFDHRAIACIFIGYPVGQKAYKLFNLS 810
Query: 1389 SRKVFVSRDIKFYEDHYPFAT 1451
+RK+F SRD++F+E+ +P+A+
Sbjct: 811 TRKIFTSRDVRFHENRFPYAS 831
Score = 85.9 bits (211), Expect(2) = 4e-47
Identities = 70/230 (30%), Positives = 99/230 (43%), Gaps = 3/230 (1%)
Frame = +2
Query: 236 LHNVLYVLDVKYNLLSVYRFTQ-LQCHILFTLTGYVLQDLSMKKAQIFGEVGDGLYLLKP 412
L +VL V K +L+SV R T+ L C + F VLQDL+ ++ G+ DGLY L
Sbjct: 459 LRDVLCVPTFKVDLMSVSRLTRGLNCSVTFFPHWCVLQDLATRRMIGLGKQRDGLYYLAA 518
Query: 413 TKIESSFFNXXXXXXXXXXXXXXXXXXRSYLQNVXXXXXXXXXXXXXXXAHFLANATPNV 592
+ N T +
Sbjct: 519 LTTNKTETNSYSSPNRPPTCNL---------------------------------TTSST 545
Query: 593 SL*HVRLGDFPFSVMKSL--NFIHFP*NSDCICHVCPKAR*SRLPFPSSAIKTQRIFELI 766
L H RLG S + + NF++F + C +C A+ RLPF +S I +++ F+LI
Sbjct: 546 DLWHSRLGHVSHSRLSFIAKNFLNFSIQFNNDCPICLLAKQHRLPFGTSEISSEKPFDLI 605
Query: 767 HINTRGPFKVSTYSGYSYFLTAVADYNRGTWTFLLKTKCNAFSVFKDFIA 916
H + G +K S+ SG YFLT V DY R TW FL+K K A + K F +
Sbjct: 606 HCDIWGRYKHSSLSGAHYFLTIVDDYTRFTWIFLMKHKDEAQPLIKHFFS 655
>gb|AAC33963.1| contains similarity to reverse transcriptases (Pfam; rvt.hmm, score:
11.19) [Arabidopsis thaliana]
Length = 1633
Score = 146 bits (369), Expect(3) = 2e-46
Identities = 73/141 (51%), Positives = 95/141 (67%), Gaps = 2/141 (1%)
Frame = +3
Query: 1035 CGYT-QQNRVVERKHTHLLEVAKGLIFQSSLPIQYWGECILTATHLVNRL-SPL*FYKES 1208
C YT QQN VVERKH HLL +A+ L+FQS++P+QYW +C+LTA +L+NRL SPL
Sbjct: 647 CAYTPQQNSVVERKHQHLLNIARSLLFQSNVPLQYWSDCVLTAAYLINRLPSPL--LDNK 704
Query: 1209 QPMKFFLANHPLIRT*DILGCLCYVSTLSHPRNKF*PRARECIFLGYPQTQKGFKVLELE 1388
P + L P + CLCY ST H RNKF PRAR C+FLGYP KG+KVL+LE
Sbjct: 705 TPFELLLKKIPDYTL--LKSCLCYASTNVHDRNKFSPRARPCVFLGYPSGYKGYKVLDLE 762
Query: 1389 SRKVFVSRDIKFYEDHYPFAT 1451
S + ++R++ F+E +PF T
Sbjct: 763 SHSISITRNVVFHETKFPFKT 783
Score = 61.2 bits (147), Expect(3) = 2e-46
Identities = 27/77 (35%), Positives = 42/77 (54%)
Frame = +2
Query: 683 CHVCPKAR*SRLPFPSSAIKTQRIFELIHINTRGPFKVSTYSGYSYFLTAVADYNRGTWT 862
C + P A+ RL + S F+LIH++ GPF + + G+ YFLT V D R TW
Sbjct: 532 CRISPLAKQKRLAYVSHNNLASSPFDLIHLDIWGPFSIESVDGFRYFLTLVDDCTRTTWV 591
Query: 863 FLLKTKCNAFSVFKDFI 913
+++K K ++F F+
Sbjct: 592 YMMKNKSEVSNIFPVFV 608
Score = 28.1 bits (61), Expect(3) = 2e-46
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 922 QFELQVKRIRSDNTLELRRGS*EAAYLNSAGIMHERSCVAT 1044
Q+ ++K IRSDN EL ++ G++H+ SC T
Sbjct: 614 QYNAKIKAIRSDNVKELA----FTKFVKEQGMIHQFSCAYT 650
>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1491
Score = 117 bits (294), Expect(3) = 3e-46
Identities = 58/138 (42%), Positives = 87/138 (63%)
Frame = +3
Query: 1038 GYTQQNRVVERKHTHLLEVAKGLIFQSSLPIQYWGECILTATHLVNRLSPL*FYKESQPM 1217
G QQN VERKH H+L V++ L+FQ+SLPI++WGE ++TA +L+NR +P + P
Sbjct: 661 GTPQQNGRVERKHRHILNVSRALLFQASLPIKFWGEAVMTAAYLINR-TPSSIHNGLSPY 719
Query: 1218 KFFLANHPLIRT*DILGCLCYVSTLSHPRNKF*PRARECIFLGYPQTQKGFKVLELESRK 1397
+ P + G CY ++ ++KF R+R CIF+GYP QKG+KV +L + +
Sbjct: 720 ELLHGCKPDYDQLRVFGSACYAHRVTRDKDKFGERSRLCIFVGYPFGQKGWKVYDLSTNE 779
Query: 1398 VFVSRDIKFYEDHYPFAT 1451
VSRD+ F E+ +P+AT
Sbjct: 780 FIVSRDVVFRENVFPYAT 797
Score = 83.6 bits (205), Expect(3) = 3e-46
Identities = 73/236 (30%), Positives = 101/236 (42%), Gaps = 6/236 (2%)
Frame = +2
Query: 227 TLILHNVLYVLDVKYNLLSVYRFT-QLQCHILFTLTGYVLQDLSMKKAQIFGEVGDGLYL 403
T+ L NVLYV + +L+SV + Q++C LFT T VLQD + GE DG+Y
Sbjct: 433 TVSLSNVLYVPALNCSLISVSKLVKQIKCLALFTDTICVLQDRFSRTLIGTGEERDGVY- 491
Query: 404 LKPTKIESSFFNXXXXXXXXXXXXXXXXXXRSYLQNVXXXXXXXXXXXXXXXAHFLANAT 583
YL + + T
Sbjct: 492 --------------------------------YLTDAATTTVHK------------VDVT 507
Query: 584 PNVSL*HVRLGDFPFSVMKSLNFIHFP*NSDCI-----CHVCPKAR*SRLPFPSSAIKTQ 748
+ +L H RLG FSV+ SL S C C VC +A+ +R FP S+ K+
Sbjct: 508 TDHALWHQRLGHPSFSVLSSLPLFS---GSSCSVSSRSCDVCFRAKQTREVFPDSSNKST 564
Query: 749 RIFELIHINTRGPFKVSTYSGYSYFLTAVADYNRGTWTFLLKTKCNAFSVFKDFIA 916
F LIH + GP++V + G YFLT V D++R WT+LL K SV +F+A
Sbjct: 565 DCFSLIHCDVWGPYRVPSSCGAVYFLTIVDDFSRSVWTYLLLAKSEVRSVLTNFLA 620
Score = 34.3 bits (77), Expect(3) = 3e-46
Identities = 19/45 (42%), Positives = 26/45 (57%)
Frame = +1
Query: 910 HSKRQFELQVKRIRSDNTLELRRGS*EAAYLNSAGIMHERSCVAT 1044
++++QF VK IRSDN E S +Y GI+H+ SCV T
Sbjct: 621 YTEKQFGKSVKIIRSDNGTEFMCLS---SYFKEQGIVHQTSCVGT 662
>gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1413
Score = 117 bits (294), Expect(3) = 3e-46
Identities = 58/138 (42%), Positives = 87/138 (63%)
Frame = +3
Query: 1038 GYTQQNRVVERKHTHLLEVAKGLIFQSSLPIQYWGECILTATHLVNRLSPL*FYKESQPM 1217
G QQN VERKH H+L V++ L+FQ+SLPI++WGE ++TA +L+NR +P + P
Sbjct: 661 GTPQQNGRVERKHRHILNVSRALLFQASLPIKFWGEAVMTAAYLINR-TPSSIHNGLSPY 719
Query: 1218 KFFLANHPLIRT*DILGCLCYVSTLSHPRNKF*PRARECIFLGYPQTQKGFKVLELESRK 1397
+ P + G CY ++ ++KF R+R CIF+GYP QKG+KV +L + +
Sbjct: 720 ELLHGCKPDYDQLRVFGSACYAHRVTRDKDKFGERSRLCIFVGYPFGQKGWKVYDLSTNE 779
Query: 1398 VFVSRDIKFYEDHYPFAT 1451
VSRD+ F E+ +P+AT
Sbjct: 780 FIVSRDVVFRENVFPYAT 797
Score = 83.2 bits (204), Expect(3) = 3e-46
Identities = 73/236 (30%), Positives = 101/236 (42%), Gaps = 6/236 (2%)
Frame = +2
Query: 227 TLILHNVLYVLDVKYNLLSVYRFT-QLQCHILFTLTGYVLQDLSMKKAQIFGEVGDGLYL 403
T+ L NVLYV + +L+SV + Q++C LFT T VLQD + GE DG+Y
Sbjct: 433 TVSLSNVLYVPALNCSLISVSKLVKQIKCLALFTDTICVLQDRFSRTLIGTGEERDGVY- 491
Query: 404 LKPTKIESSFFNXXXXXXXXXXXXXXXXXXRSYLQNVXXXXXXXXXXXXXXXAHFLANAT 583
YL + + T
Sbjct: 492 --------------------------------YLTDAATTTVHK------------VDIT 507
Query: 584 PNVSL*HVRLGDFPFSVMKSLNFIHFP*NSDCI-----CHVCPKAR*SRLPFPSSAIKTQ 748
+ +L H RLG FSV+ SL S C C VC +A+ +R FP S+ K+
Sbjct: 508 TDHALWHQRLGHPSFSVLSSLPLFS---GSSCSVSSRSCDVCFRAKQTREVFPDSSNKST 564
Query: 749 RIFELIHINTRGPFKVSTYSGYSYFLTAVADYNRGTWTFLLKTKCNAFSVFKDFIA 916
F LIH + GP++V + G YFLT V D++R WT+LL K SV +F+A
Sbjct: 565 DCFSLIHCDVWGPYRVPSSCGAVYFLTIVDDFSRSVWTYLLLAKSEVRSVLTNFLA 620
Score = 34.3 bits (77), Expect(3) = 3e-46
Identities = 19/45 (42%), Positives = 26/45 (57%)
Frame = +1
Query: 910 HSKRQFELQVKRIRSDNTLELRRGS*EAAYLNSAGIMHERSCVAT 1044
++++QF VK IRSDN E S +Y GI+H+ SCV T
Sbjct: 621 YTEKQFGKSVKIIRSDNGTEFMCLS---SYFKEQGIVHQTSCVGT 662
>gb|EOY05030.1| Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Theobroma cacao]
Length = 1141
Score = 127 bits (320), Expect(3) = 6e-46
Identities = 61/140 (43%), Positives = 89/140 (63%)
Frame = +3
Query: 1047 QQNRVVERKHTHLLEVAKGLIFQSSLPIQYWGECILTATHLVNRLSPL*FYKESQPMKFF 1226
QQN VER H HLLEVA+ L FQ+ LPI++WGEC+LTA +L+NR+ PL K P +
Sbjct: 452 QQNGRVERNHRHLLEVARVLRFQAYLPIKFWGECVLTAAYLINRM-PLSVLKNKTPYEIL 510
Query: 1227 LANHPLIRT*DILGCLCYVSTLSHPRNKF*PRARECIFLGYPQTQKGFKVLELESRKVFV 1406
P + GCLCY + R+KF P ++ IFLGYP QKG+++ ++E +K++
Sbjct: 511 FGRSPTYQHLRTFGCLCYGLITNKSRDKFTPCSKPGIFLGYPHGQKGYRIFDIEDKKIYT 570
Query: 1407 SRDIKFYEDHYPFATVATHN 1466
SRD++F+++ +P A N
Sbjct: 571 SRDVQFFKNIFPSALTKGSN 590
Score = 73.9 bits (180), Expect(3) = 6e-46
Identities = 38/104 (36%), Positives = 57/104 (54%)
Frame = +2
Query: 569 LANATPNVSL*HVRLGDFPFSVMKSLNFIHFP*NSDCICHVCPKAR*SRLPFPSSAIKTQ 748
+A+ + + H RLG P + + + + + C C +AR RLPF +S ++
Sbjct: 291 MASNMRHADMWHRRLGHLPMNRLSFIGDLSINVKENKFCDACCRARQHRLPFFASTYESS 350
Query: 749 RIFELIHINTRGPFKVSTYSGYSYFLTAVADYNRGTWTFLLKTK 880
RIFELIH + G +K + SG YFLT V DY+R W +L+K K
Sbjct: 351 RIFELIHCDIWGDYKTPSLSGAVYFLTIVNDYSRAIWVYLMKHK 394
Score = 32.7 bits (73), Expect(3) = 6e-46
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = +1
Query: 916 KRQFELQVKRIRSDNTLELRRGS*EAAYLNSAGIMHERSCVAT 1044
+ QF QVK +RSDN +E + S Y N GI + SC T
Sbjct: 409 RTQFNTQVKIVRSDNRMEFKH-SDLLTYYNENGIERQTSCTNT 450
>dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1109
Score = 128 bits (322), Expect(3) = 1e-45
Identities = 62/151 (41%), Positives = 92/151 (60%)
Frame = +3
Query: 1038 GYTQQNRVVERKHTHLLEVAKGLIFQSSLPIQYWGECILTATHLVNRLSPL*FYKESQPM 1217
G QN VERKH H+L +A+ L FQS LPIQ+WGECIL+A +L+NR +P + P
Sbjct: 441 GTPHQNGRVERKHRHILNIARALRFQSYLPIQFWGECILSAAYLINR-TPSMLLQGKSPY 499
Query: 1218 KFFLANHPLIRT*DILGCLCYVSTLSHPRNKF*PRARECIFLGYPQTQKGFKVLELESRK 1397
+ P + G LCY +H +KF R+R C+F+GYP QKG+++ +LE +K
Sbjct: 500 EMLYKTAPNYSHLRVFGSLCYAHNQNHKGDKFVARSRRCVFVGYPHGQKGWRLFDLEEQK 559
Query: 1398 VFVSRDIKFYEDHYPFATVATHNTTTHRFSF 1490
FVSRD+ F E +P++ ++ + T+ +F
Sbjct: 560 FFVSRDVIFQETEFPYSKMSCNRFTSSHKAF 590
Score = 71.6 bits (174), Expect(3) = 1e-45
Identities = 33/79 (41%), Positives = 47/79 (59%)
Frame = +2
Query: 680 ICHVCPKAR*SRLPFPSSAIKTQRIFELIHINTRGPFKVSTYSGYSYFLTAVADYNRGTW 859
+C C +A+ +R FP S ++ F+LIH + GP++ +YSG YFLT V DY+RG W
Sbjct: 322 VCDTCMRAKQTRDTFPLSDNRSMDSFQLIHCDVWGPYRTPSYSGARYFLTIVDDYSRGVW 381
Query: 860 TFLLKTKCNAFSVFKDFIA 916
+L+ K KDFIA
Sbjct: 382 VYLMTDKSETQKHLKDFIA 400
Score = 33.5 bits (75), Expect(3) = 1e-45
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = +1
Query: 916 KRQFELQVKRIRSDNTLELRRGS*EAAYLNSAGIMHERSCVAT 1044
+RQF+ ++K +RSDN E Y GI HE SCV T
Sbjct: 403 ERQFDTEIKTVRSDNGTEFLC---MREYFLHKGITHETSCVGT 442