BLASTX nr result
ID: Atropa21_contig00035173
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00035173
(843 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006341533.1| PREDICTED: pentatricopeptide repeat-containi... 233 3e-74
ref|XP_004236430.1| PREDICTED: pentatricopeptide repeat-containi... 218 1e-70
emb|CBI35789.3| unnamed protein product [Vitis vinifera] 152 5e-48
ref|XP_002271048.1| PREDICTED: pentatricopeptide repeat-containi... 152 5e-48
gb|EXB69102.1| hypothetical protein L484_017380 [Morus notabilis] 149 3e-47
ref|XP_006299483.1| hypothetical protein CARUB_v10015648mg [Caps... 140 1e-41
ref|XP_006406664.1| hypothetical protein EUTSA_v10020183mg [Eutr... 136 7e-41
emb|CAN79606.1| hypothetical protein VITISV_027500 [Vitis vinifera] 127 2e-40
gb|EMJ10134.1| hypothetical protein PRUPE_ppb014337mg, partial [... 134 8e-40
ref|NP_188429.1| pentatricopeptide repeat-containing protein [Ar... 134 2e-39
ref|XP_002883101.1| pentatricopeptide repeat-containing protein ... 132 2e-39
ref|XP_004160441.1| PREDICTED: pentatricopeptide repeat-containi... 130 9e-38
ref|XP_002529554.1| pentatricopeptide repeat-containing protein,... 132 9e-38
ref|XP_002322098.1| hypothetical protein POPTR_0015s04490g [Popu... 135 2e-37
gb|EOY21294.1| Pentatricopeptide repeat (PPR) superfamily protei... 137 2e-37
ref|XP_004137553.1| PREDICTED: pentatricopeptide repeat-containi... 127 5e-37
ref|XP_004301253.1| PREDICTED: pentatricopeptide repeat-containi... 119 6e-37
ref|XP_006478000.1| PREDICTED: pentatricopeptide repeat-containi... 121 6e-37
ref|XP_006601731.1| PREDICTED: uncharacterized protein LOC100305... 100 3e-30
ref|XP_004492508.1| PREDICTED: pentatricopeptide repeat-containi... 91 5e-29
>ref|XP_006341533.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g18020-like [Solanum tuberosum]
Length = 680
Score = 233 bits (594), Expect(2) = 3e-74
Identities = 124/179 (69%), Positives = 132/179 (73%)
Frame = -3
Query: 667 VRFCKFPFPIPLHNSAKTCNSSLSFFSTSVIQPNXXXXXXXXXQKQSSEGQEFDIGRNFI 488
+ FCKFPF IPL NSAKT SSLS FST +QS EGQEFD
Sbjct: 1 MHFCKFPFLIPLQNSAKTFTSSLSLFSTFEFH---------LTNQQSFEGQEFD------ 45
Query: 487 DRAYWTRRIHNLCAIDGNVXXXXXXXXXXXLQGYHPDSLNLSSIIHALCDAHRFSEAHQR 308
RAYWTRRIH LCAIDGNV LQGYHPDSLNLSSI+HALCD+HRFSEAHQR
Sbjct: 46 -RAYWTRRIHKLCAIDGNVDEALRLLDGLRLQGYHPDSLNLSSIVHALCDSHRFSEAHQR 104
Query: 307 LLLAVSCHSTVPDERTCNVLIARLLHAGTPQATMRVISALFFQKPQFVPSLMNYNRLIH 131
LLAVS STVPDERTCNVLIARLL+A TPQ ++RVISALF+QKPQFVPSLMNYNRLIH
Sbjct: 105 FLLAVSSQSTVPDERTCNVLIARLLYAATPQESVRVISALFYQKPQFVPSLMNYNRLIH 163
Score = 73.2 bits (178), Expect(2) = 3e-74
Identities = 34/47 (72%), Positives = 38/47 (80%)
Frame = -1
Query: 144 IV*SICGFERIVDAHKLFVDMRKRGHCPNAVSYTTLIDGYCGGGEVR 4
++ +C ER DAH+LFVDMRKRGH PNAVSYTTLI GYCG GEVR
Sbjct: 161 LIHQLCTLERNRDAHQLFVDMRKRGHSPNAVSYTTLICGYCGVGEVR 207
>ref|XP_004236430.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g18020-like [Solanum lycopersicum]
Length = 676
Score = 218 bits (555), Expect(2) = 1e-70
Identities = 118/179 (65%), Positives = 128/179 (71%)
Frame = -3
Query: 667 VRFCKFPFPIPLHNSAKTCNSSLSFFSTSVIQPNXXXXXXXXXQKQSSEGQEFDIGRNFI 488
+ FCKF F IPL NSAKT SSLS FST +QS E +EFD
Sbjct: 1 MHFCKFSFLIPLQNSAKTFTSSLSLFSTFEFH---------LTNQQSFEVEEFD------ 45
Query: 487 DRAYWTRRIHNLCAIDGNVXXXXXXXXXXXLQGYHPDSLNLSSIIHALCDAHRFSEAHQR 308
RAYWTRRIH LCAIDG+V LQGYHPDSLNLSSI+HALCD+ RFSEAH+R
Sbjct: 46 -RAYWTRRIHKLCAIDGDVDEALRLLDELRLQGYHPDSLNLSSIVHALCDSKRFSEAHRR 104
Query: 307 LLLAVSCHSTVPDERTCNVLIARLLHAGTPQATMRVISALFFQKPQFVPSLMNYNRLIH 131
LLAVS STVPDERTCNVLIARLL+A PQ T+RVISALF+QKPQFVPSLMNYNRLIH
Sbjct: 105 FLLAVSSQSTVPDERTCNVLIARLLYAANPQETVRVISALFYQKPQFVPSLMNYNRLIH 163
Score = 75.9 bits (185), Expect(2) = 1e-70
Identities = 34/46 (73%), Positives = 38/46 (82%)
Frame = -1
Query: 144 IV*SICGFERIVDAHKLFVDMRKRGHCPNAVSYTTLIDGYCGGGEV 7
++ +C ER DAH+LFVDMRKRGH PNAVSYTTLIDGYCG GEV
Sbjct: 161 LIHQLCTLERNRDAHQLFVDMRKRGHSPNAVSYTTLIDGYCGAGEV 206
>emb|CBI35789.3| unnamed protein product [Vitis vinifera]
Length = 912
Score = 152 bits (383), Expect(2) = 5e-48
Identities = 83/157 (52%), Positives = 105/157 (66%)
Frame = -3
Query: 601 LSFFSTSVIQPNXXXXXXXXXQKQSSEGQEFDIGRNFIDRAYWTRRIHNLCAIDGNVXXX 422
L+FF ++ PN +Q E +E + + I++A+W+R+IHNLC D NV
Sbjct: 266 LAFFFSAQSTPN----------QQHEEEKEEE---SIINKAFWSRKIHNLCTRDRNVDEA 312
Query: 421 XXXXXXXXLQGYHPDSLNLSSIIHALCDAHRFSEAHQRLLLAVSCHSTVPDERTCNVLIA 242
L+GY PDSLNLSSIIHALCDA+RFSEAH RLLL+ + H VPD+RTCNVLIA
Sbjct: 313 LRLLDLLRLRGYRPDSLNLSSIIHALCDANRFSEAHHRLLLSFASH-CVPDQRTCNVLIA 371
Query: 241 RLLHAGTPQATMRVISALFFQKPQFVPSLMNYNRLIH 131
RLL + TP AT+ V L +P+FVPSL+NYNRLIH
Sbjct: 372 RLLDSRTPHATLHVFRGLIAARPEFVPSLINYNRLIH 408
Score = 66.6 bits (161), Expect(2) = 5e-48
Identities = 29/45 (64%), Positives = 34/45 (75%)
Frame = -1
Query: 144 IV*SICGFERIVDAHKLFVDMRKRGHCPNAVSYTTLIDGYCGGGE 10
++ +C F + +AH LF DMR RGHCPNAVSYTTLIDGYC GE
Sbjct: 406 LIHQLCSFSQPNEAHGLFFDMRSRGHCPNAVSYTTLIDGYCKIGE 450
>ref|XP_002271048.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g18020-like [Vitis vinifera]
Length = 680
Score = 152 bits (383), Expect(2) = 5e-48
Identities = 83/157 (52%), Positives = 105/157 (66%)
Frame = -3
Query: 601 LSFFSTSVIQPNXXXXXXXXXQKQSSEGQEFDIGRNFIDRAYWTRRIHNLCAIDGNVXXX 422
L+FF ++ PN +Q E +E + + I++A+W+R+IHNLC D NV
Sbjct: 34 LAFFFSAQSTPN----------QQHEEEKEEE---SIINKAFWSRKIHNLCTRDRNVDEA 80
Query: 421 XXXXXXXXLQGYHPDSLNLSSIIHALCDAHRFSEAHQRLLLAVSCHSTVPDERTCNVLIA 242
L+GY PDSLNLSSIIHALCDA+RFSEAH RLLL+ + H VPD+RTCNVLIA
Sbjct: 81 LRLLDLLRLRGYRPDSLNLSSIIHALCDANRFSEAHHRLLLSFASH-CVPDQRTCNVLIA 139
Query: 241 RLLHAGTPQATMRVISALFFQKPQFVPSLMNYNRLIH 131
RLL + TP AT+ V L +P+FVPSL+NYNRLIH
Sbjct: 140 RLLDSRTPHATLHVFRGLIAARPEFVPSLINYNRLIH 176
Score = 66.6 bits (161), Expect(2) = 5e-48
Identities = 29/45 (64%), Positives = 34/45 (75%)
Frame = -1
Query: 144 IV*SICGFERIVDAHKLFVDMRKRGHCPNAVSYTTLIDGYCGGGE 10
++ +C F + +AH LF DMR RGHCPNAVSYTTLIDGYC GE
Sbjct: 174 LIHQLCSFSQPNEAHGLFFDMRSRGHCPNAVSYTTLIDGYCKIGE 218
>gb|EXB69102.1| hypothetical protein L484_017380 [Morus notabilis]
Length = 714
Score = 149 bits (377), Expect(2) = 3e-47
Identities = 85/167 (50%), Positives = 106/167 (63%), Gaps = 5/167 (2%)
Frame = -3
Query: 619 KTCNSSLSFFSTSVIQPNXXXXXXXXXQK-QSSEGQEFDIGR----NFIDRAYWTRRIHN 455
KT + SL+FF T+ I P+ K QS+ G + + D++YWT+ IHN
Sbjct: 16 KTISVSLAFFFTTTITPHPHPQQQHQQPKRQSNHGPDNSFSALEQVSVDDKSYWTKTIHN 75
Query: 454 LCAIDGNVXXXXXXXXXXXLQGYHPDSLNLSSIIHALCDAHRFSEAHQRLLLAVSCHSTV 275
LC NV L+GY PDSLNLSSI+HALCD++RF EAH RL+L+V + V
Sbjct: 76 LCTRHRNVDEALCLLDRLSLRGYRPDSLNLSSIVHALCDSNRFDEAHHRLILSVD-SNCV 134
Query: 274 PDERTCNVLIARLLHAGTPQATMRVISALFFQKPQFVPSLMNYNRLI 134
PDERTCNVLIARLL + P AT+RVI L KP+FVPSL+NYNRLI
Sbjct: 135 PDERTCNVLIARLLGSKCPDATLRVIRKLIEFKPEFVPSLVNYNRLI 181
Score = 66.2 bits (160), Expect(2) = 3e-47
Identities = 25/46 (54%), Positives = 37/46 (80%)
Frame = -1
Query: 144 IV*SICGFERIVDAHKLFVDMRKRGHCPNAVSYTTLIDGYCGGGEV 7
++ +C F R+ +AH+LF D++ RGHCPNAV++TTLI+GYC GE+
Sbjct: 180 LIDQLCSFSRVAEAHRLFFDLQDRGHCPNAVTFTTLINGYCKVGEL 225
>ref|XP_006299483.1| hypothetical protein CARUB_v10015648mg [Capsella rubella]
gi|482568192|gb|EOA32381.1| hypothetical protein
CARUB_v10015648mg [Capsella rubella]
Length = 687
Score = 140 bits (352), Expect(2) = 1e-41
Identities = 79/157 (50%), Positives = 99/157 (63%)
Frame = -3
Query: 601 LSFFSTSVIQPNXXXXXXXXXQKQSSEGQEFDIGRNFIDRAYWTRRIHNLCAIDGNVXXX 422
LSF STSV+ P+ + + E D R+ DRAYW RRIH++CA+ N
Sbjct: 23 LSFSSTSVVVPDHFEAQIHSEGEDDAIEAE-DRRRSVTDRAYWRRRIHSICAVHQNPDEA 81
Query: 421 XXXXXXXXLQGYHPDSLNLSSIIHALCDAHRFSEAHQRLLLAVSCHSTVPDERTCNVLIA 242
L+GY PDSLNLSS+IHALCDA RF EAH+R LL V+ +PDERTCNV++A
Sbjct: 82 LRIIDGLCLRGYRPDSLNLSSVIHALCDAGRFDEAHRRCLLFVA-SGFIPDERTCNVIVA 140
Query: 241 RLLHAGTPQATMRVISALFFQKPQFVPSLMNYNRLIH 131
RLL + +P T+ VI L K +FVPSL NYNRLI+
Sbjct: 141 RLLDSVSPVTTLGVIHRLIGIKREFVPSLTNYNRLIN 177
Score = 57.4 bits (137), Expect(2) = 1e-41
Identities = 23/41 (56%), Positives = 29/41 (70%)
Frame = -1
Query: 144 IV*SICGFERIVDAHKLFVDMRKRGHCPNAVSYTTLIDGYC 22
++ +C R++DAH L DMR RGH PN V+YTTLI GYC
Sbjct: 175 LINQLCLIHRVIDAHNLVFDMRNRGHLPNVVTYTTLIGGYC 215
>ref|XP_006406664.1| hypothetical protein EUTSA_v10020183mg [Eutrema salsugineum]
gi|557107810|gb|ESQ48117.1| hypothetical protein
EUTSA_v10020183mg [Eutrema salsugineum]
Length = 694
Score = 136 bits (343), Expect(2) = 7e-41
Identities = 74/153 (48%), Positives = 95/153 (62%)
Frame = -3
Query: 589 STSVIQPNXXXXXXXXXQKQSSEGQEFDIGRNFIDRAYWTRRIHNLCAIDGNVXXXXXXX 410
S S +Q + +K+ + D RN DRAYW RRIH+ C + N
Sbjct: 33 SVSQLQKSDVVEARIHSEKEDDAIEAEDRRRNVTDRAYWRRRIHSSCTVRRNPDEALRIL 92
Query: 409 XXXXLQGYHPDSLNLSSIIHALCDAHRFSEAHQRLLLAVSCHSTVPDERTCNVLIARLLH 230
L+GY PDSLNLSS+IH+LCDA RF EAH+R LL V+ +PDERTCNV+IARLL
Sbjct: 93 DGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFVA-SGFIPDERTCNVIIARLLD 151
Query: 229 AGTPQATMRVISALFFQKPQFVPSLMNYNRLIH 131
+G+P +T+ VI L K +FVPSL NYNR+I+
Sbjct: 152 SGSPVSTLGVIHRLIGVKKEFVPSLTNYNRMIN 184
Score = 58.2 bits (139), Expect(2) = 7e-41
Identities = 24/37 (64%), Positives = 28/37 (75%)
Frame = -1
Query: 132 ICGFERIVDAHKLFVDMRKRGHCPNAVSYTTLIDGYC 22
+C R++DAHKL DMR RGH PN V+YTTLI GYC
Sbjct: 186 LCLIYRVIDAHKLVFDMRNRGHLPNVVTYTTLIGGYC 222
>emb|CAN79606.1| hypothetical protein VITISV_027500 [Vitis vinifera]
Length = 959
Score = 127 bits (318), Expect(2) = 2e-40
Identities = 66/104 (63%), Positives = 76/104 (73%)
Frame = -3
Query: 442 DGNVXXXXXXXXXXXLQGYHPDSLNLSSIIHALCDAHRFSEAHQRLLLAVSCHSTVPDER 263
D NV L+GY PDSLNLSSIIHALCDA+RFSEAH RLLL+ + H VPD+R
Sbjct: 364 DRNVDEALRLLDLLRLRGYRPDSLNLSSIIHALCDANRFSEAHHRLLLSFASHC-VPDQR 422
Query: 262 TCNVLIARLLHAGTPQATMRVISALFFQKPQFVPSLMNYNRLIH 131
TCNVLIARLL + TP AT+ V L +P+FVPSL+NYNRLIH
Sbjct: 423 TCNVLIARLLDSRTPHATLHVFRGLIAARPEFVPSLINYNRLIH 466
Score = 66.6 bits (161), Expect(2) = 2e-40
Identities = 29/45 (64%), Positives = 34/45 (75%)
Frame = -1
Query: 144 IV*SICGFERIVDAHKLFVDMRKRGHCPNAVSYTTLIDGYCGGGE 10
++ +C F + +AH LF DMR RGHCPNAVSYTTLIDGYC GE
Sbjct: 464 LIHQLCSFSQPNEAHGLFFDMRSRGHCPNAVSYTTLIDGYCKIGE 508
>gb|EMJ10134.1| hypothetical protein PRUPE_ppb014337mg, partial [Prunus persica]
Length = 681
Score = 134 bits (337), Expect(2) = 8e-40
Identities = 73/162 (45%), Positives = 98/162 (60%)
Frame = -3
Query: 619 KTCNSSLSFFSTSVIQPNXXXXXXXXXQKQSSEGQEFDIGRNFIDRAYWTRRIHNLCAID 440
KT L F T IQP+ Q+ + Q + +R+YWT++IH+LC
Sbjct: 6 KTITIPLVFLFTHPIQPSHHHQQPQHHQQDGDQDQT-----SIDNRSYWTKKIHSLCTAH 60
Query: 439 GNVXXXXXXXXXXXLQGYHPDSLNLSSIIHALCDAHRFSEAHQRLLLAVSCHSTVPDERT 260
NV L GY PDSLNLSSI+HALCD++RF+EAH R +++ VPDERT
Sbjct: 61 RNVDQALHLLDRLRLLGYRPDSLNLSSILHALCDSNRFAEAHHRFAHSIA-SDCVPDERT 119
Query: 259 CNVLIARLLHAGTPQATMRVISALFFQKPQFVPSLMNYNRLI 134
CNV++ARLL + TP T+R++ L KP+FVPSL+NYNRL+
Sbjct: 120 CNVIVARLLDSRTPHTTLRLLHRLSHVKPEFVPSLINYNRLM 161
Score = 57.0 bits (136), Expect(2) = 8e-40
Identities = 25/42 (59%), Positives = 32/42 (76%)
Frame = -1
Query: 132 ICGFERIVDAHKLFVDMRKRGHCPNAVSYTTLIDGYCGGGEV 7
+C R +AH++F DM +GHCPNAVSYTTLI+GYC GE+
Sbjct: 164 LCLLLRPWEAHRVFFDMLSKGHCPNAVSYTTLINGYCLIGEL 205
>ref|NP_188429.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274006|sp|Q9LSK8.1|PP240_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g18020 gi|11994208|dbj|BAB01330.1| unnamed protein
product [Arabidopsis thaliana]
gi|332642514|gb|AEE76035.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 688
Score = 134 bits (338), Expect(2) = 2e-39
Identities = 75/160 (46%), Positives = 101/160 (63%)
Frame = -3
Query: 610 NSSLSFFSTSVIQPNXXXXXXXXXQKQSSEGQEFDIGRNFIDRAYWTRRIHNLCAIDGNV 431
+ SLSF S SV++ + + + D R+ DRAYW RRIH++CA+ N
Sbjct: 19 SKSLSFSSASVLKSDDVEGEDDAIEAE-------DRRRSVTDRAYWRRRIHSICAVRRNP 71
Query: 430 XXXXXXXXXXXLQGYHPDSLNLSSIIHALCDAHRFSEAHQRLLLAVSCHSTVPDERTCNV 251
L+GY PDSLNLSS+IH+LCDA RF EAH+R LL ++ +PDERTCNV
Sbjct: 72 DEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLA-SGFIPDERTCNV 130
Query: 250 LIARLLHAGTPQATMRVISALFFQKPQFVPSLMNYNRLIH 131
+IARLL++ +P +T+ VI L K +FVPSL NYNRL++
Sbjct: 131 IIARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMN 170
Score = 55.5 bits (132), Expect(2) = 2e-39
Identities = 22/37 (59%), Positives = 28/37 (75%)
Frame = -1
Query: 132 ICGFERIVDAHKLFVDMRKRGHCPNAVSYTTLIDGYC 22
+C R++DAHKL DMR RGH P+ V++TTLI GYC
Sbjct: 172 LCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYC 208
>ref|XP_002883101.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297328941|gb|EFH59360.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 689
Score = 132 bits (333), Expect(2) = 2e-39
Identities = 75/160 (46%), Positives = 98/160 (61%)
Frame = -3
Query: 610 NSSLSFFSTSVIQPNXXXXXXXXXQKQSSEGQEFDIGRNFIDRAYWTRRIHNLCAIDGNV 431
+ SLSF S S+++ + + + D R+ +RAYW RRIH++CA+ N
Sbjct: 19 SKSLSFSSASILKSDDVEG-------EDDAVEAEDRRRSVTNRAYWRRRIHSICAVRRNP 71
Query: 430 XXXXXXXXXXXLQGYHPDSLNLSSIIHALCDAHRFSEAHQRLLLAVSCHSTVPDERTCNV 251
L+GY PDSLNLSS+IH+LCDA RF EAH+R LL V+ +PDERTCNV
Sbjct: 72 DEALRVLDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFVA-SGFIPDERTCNV 130
Query: 250 LIARLLHAGTPQATMRVISALFFQKPQFVPSLMNYNRLIH 131
+IARLL +P +T VI L K +FVPSL NYNRLI+
Sbjct: 131 IIARLLDLRSPVSTFGVIQRLIGFKKEFVPSLTNYNRLIN 170
Score = 57.0 bits (136), Expect(2) = 2e-39
Identities = 23/41 (56%), Positives = 30/41 (73%)
Frame = -1
Query: 144 IV*SICGFERIVDAHKLFVDMRKRGHCPNAVSYTTLIDGYC 22
++ +C R++DAHKL DMR RGH PN V++TTLI GYC
Sbjct: 168 LINQLCLIYRVIDAHKLVFDMRNRGHLPNVVTFTTLIGGYC 208
>ref|XP_004160441.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g18020-like [Cucumis sativus]
Length = 681
Score = 130 bits (326), Expect(2) = 9e-38
Identities = 66/134 (49%), Positives = 87/134 (64%)
Frame = -3
Query: 535 KQSSEGQEFDIGRNFIDRAYWTRRIHNLCAIDGNVXXXXXXXXXXXLQGYHPDSLNLSSI 356
+ S+ +E+ + D +YWT++IH LC D NV L GY LNL+S+
Sbjct: 36 ENGSDSREWAPEESVADVSYWTKKIHGLCTKDRNVDEALQLLDALRLHGYQFHPLNLASV 95
Query: 355 IHALCDAHRFSEAHQRLLLAVSCHSTVPDERTCNVLIARLLHAGTPQATMRVISALFFQK 176
IH LCDAHRF EAH R +L+++ VPDERTCNVLIARLL +P T+R++ LF K
Sbjct: 96 IHGLCDAHRFHEAHCRFMLSIASR-CVPDERTCNVLIARLLDYRSPYCTLRLLVCLFDAK 154
Query: 175 PQFVPSLMNYNRLI 134
P+FVPS++NYNRLI
Sbjct: 155 PEFVPSIVNYNRLI 168
Score = 54.3 bits (129), Expect(2) = 9e-38
Identities = 24/48 (50%), Positives = 30/48 (62%), Gaps = 10/48 (20%)
Frame = -1
Query: 135 SICGFERIVD----------AHKLFVDMRKRGHCPNAVSYTTLIDGYC 22
SI + R++D AH++ DM+ RGHCPN VSYT LIDGYC
Sbjct: 160 SIVNYNRLIDQFCSFSLPNVAHRVLFDMKSRGHCPNVVSYTALIDGYC 207
>ref|XP_002529554.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223530966|gb|EEF32823.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 678
Score = 132 bits (333), Expect(2) = 9e-38
Identities = 78/163 (47%), Positives = 95/163 (58%)
Frame = -3
Query: 619 KTCNSSLSFFSTSVIQPNXXXXXXXXXQKQSSEGQEFDIGRNFIDRAYWTRRIHNLCAID 440
K + L+F ST +P +Q + QE I + + +YWT++IH LC
Sbjct: 15 KPSSVPLTFLSTHH-RPYHEVLLPQEQYQQLQQEQEQPI--SITNSSYWTKKIHLLCTQQ 71
Query: 439 GNVXXXXXXXXXXXLQGYHPDSLNLSSIIHALCDAHRFSEAHQRLLLAVSCHSTVPDERT 260
V L GY PDSLN SSIIHALCDA RF EAH R LL ++ VPDERT
Sbjct: 72 RKVDEALTLLDHLRLSGYRPDSLNFSSIIHALCDAKRFKEAHHRFLLCIA-SDCVPDERT 130
Query: 259 CNVLIARLLHAGTPQATMRVISALFFQKPQFVPSLMNYNRLIH 131
CNVLIARLL + P AT+ V+ LF KPQFVPSL+NYNR I+
Sbjct: 131 CNVLIARLLDSQYPHATLHVLYRLFHVKPQFVPSLINYNRFIY 173
Score = 51.6 bits (122), Expect(2) = 9e-38
Identities = 22/41 (53%), Positives = 28/41 (68%)
Frame = -1
Query: 129 CGFERIVDAHKLFVDMRKRGHCPNAVSYTTLIDGYCGGGEV 7
C F + AH+L DM RGHCPN V++T+L+ GYC GEV
Sbjct: 176 CEFSQPDVAHRLLFDMISRGHCPNVVTFTSLLTGYCRVGEV 216
>ref|XP_002322098.1| hypothetical protein POPTR_0015s04490g [Populus trichocarpa]
gi|222869094|gb|EEF06225.1| hypothetical protein
POPTR_0015s04490g [Populus trichocarpa]
Length = 668
Score = 135 bits (339), Expect(2) = 2e-37
Identities = 69/118 (58%), Positives = 86/118 (72%)
Frame = -3
Query: 487 DRAYWTRRIHNLCAIDGNVXXXXXXXXXXXLQGYHPDSLNLSSIIHALCDAHRFSEAHQR 308
+R+YWT++IH+LC NV L+GY PDSLNLSSIIH LCDA+RF+EAHQR
Sbjct: 48 NRSYWTQKIHDLCTKHRNVDEALRLLDHLRLRGYLPDSLNLSSIIHGLCDANRFNEAHQR 107
Query: 307 LLLAVSCHSTVPDERTCNVLIARLLHAGTPQATMRVISALFFQKPQFVPSLMNYNRLI 134
L++ ++ VPDERTCNVL+ARLLH+ P T+ VI L KP+FVPSL+NYNRLI
Sbjct: 108 LIIFLT-SLCVPDERTCNVLVARLLHSKDPFRTLNVIHRLIEFKPEFVPSLINYNRLI 164
Score = 48.5 bits (114), Expect(2) = 2e-37
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 10/53 (18%)
Frame = -1
Query: 135 SICGFERIVD----------AHKLFVDMRKRGHCPNAVSYTTLIDGYCGGGEV 7
S+ + R++D AH++ DM RGHCP+ VSYTTL++GY GE+
Sbjct: 156 SLINYNRLIDQFCSVSLPNVAHRMLYDMINRGHCPSIVSYTTLVNGYSKIGEI 208
>gb|EOY21294.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
[Theobroma cacao]
Length = 690
Score = 137 bits (346), Expect(2) = 2e-37
Identities = 70/118 (59%), Positives = 83/118 (70%)
Frame = -3
Query: 487 DRAYWTRRIHNLCAIDGNVXXXXXXXXXXXLQGYHPDSLNLSSIIHALCDAHRFSEAHQR 308
++ YW +IHNLC NV L GY PD LNLSSIIHALCD++RFSEAH R
Sbjct: 53 NKPYWATKIHNLCTKHRNVDEAISLLDTLCLHGYRPDYLNLSSIIHALCDSNRFSEAHHR 112
Query: 307 LLLAVSCHSTVPDERTCNVLIARLLHAGTPQATMRVISALFFQKPQFVPSLMNYNRLI 134
LL++S H +PDERTCNVLIARLLH+ TP +T+ VI +L K QFVPSL N+NRLI
Sbjct: 113 FLLSLSSH-LIPDERTCNVLIARLLHSKTPHSTLHVIRSLLNVKAQFVPSLTNFNRLI 169
Score = 45.4 bits (106), Expect(2) = 2e-37
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 10/53 (18%)
Frame = -1
Query: 135 SICGFERIVD----------AHKLFVDMRKRGHCPNAVSYTTLIDGYCGGGEV 7
S+ F R++D H+LF M+ +G PNAV+YTTLI GY G G++
Sbjct: 161 SLTNFNRLIDQFCADLRVDIGHRLFFYMKSKGQLPNAVTYTTLISGYVGIGDL 213
>ref|XP_004137553.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g18020-like [Cucumis sativus]
Length = 646
Score = 127 bits (320), Expect(2) = 5e-37
Identities = 64/118 (54%), Positives = 80/118 (67%)
Frame = -3
Query: 487 DRAYWTRRIHNLCAIDGNVXXXXXXXXXXXLQGYHPDSLNLSSIIHALCDAHRFSEAHQR 308
D +YWT++IH LC D NV L GY LNL+S+IH LCDAHRF EAH R
Sbjct: 19 DVSYWTKKIHGLCTKDRNVDEALQLLDALRLHGYQFHPLNLASVIHGLCDAHRFHEAHCR 78
Query: 307 LLLAVSCHSTVPDERTCNVLIARLLHAGTPQATMRVISALFFQKPQFVPSLMNYNRLI 134
+L+++ VPDERTCNVLIARLL +P T+R++ LF KP+FVPS++NYNRLI
Sbjct: 79 FMLSIASR-CVPDERTCNVLIARLLDYRSPYCTLRLLVCLFDAKPEFVPSIVNYNRLI 135
Score = 54.3 bits (129), Expect(2) = 5e-37
Identities = 24/48 (50%), Positives = 30/48 (62%), Gaps = 10/48 (20%)
Frame = -1
Query: 135 SICGFERIVD----------AHKLFVDMRKRGHCPNAVSYTTLIDGYC 22
SI + R++D AH++ DM+ RGHCPN VSYT LIDGYC
Sbjct: 127 SIVNYNRLIDQFCSFSLPNVAHRVLFDMKSRGHCPNVVSYTALIDGYC 174
>ref|XP_004301253.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g18020-like [Fragaria vesca subsp. vesca]
Length = 682
Score = 119 bits (298), Expect(2) = 6e-37
Identities = 63/116 (54%), Positives = 76/116 (65%), Gaps = 1/116 (0%)
Frame = -3
Query: 478 YWTRRIHNLCAIDGNVXXXXXXXXXXXLQGYHPDSLNLSSIIHALCDAHRFSEAHQRLLL 299
YWT+ IH+LC NV L+GY P LNL+SI+HALCD+HRF EAH R
Sbjct: 46 YWTKTIHHLCTRHRNVDQALHLLDHLHLRGYRPVPLNLTSIVHALCDSHRFDEAHHR--F 103
Query: 298 AVSCHS-TVPDERTCNVLIARLLHAGTPQATMRVISALFFQKPQFVPSLMNYNRLI 134
A S HS VPD+RTCNV+IARLL + TP T+ V+ L KP FV SL+NYNRL+
Sbjct: 104 ANSIHSDCVPDQRTCNVIIARLLDSQTPHTTLNVLRLLSHLKPDFVASLVNYNRLM 159
Score = 62.4 bits (150), Expect(2) = 6e-37
Identities = 26/42 (61%), Positives = 31/42 (73%)
Frame = -1
Query: 132 ICGFERIVDAHKLFVDMRKRGHCPNAVSYTTLIDGYCGGGEV 7
+C R +AH + DM RGHCPNAVSYTTLI+GYCG GE+
Sbjct: 162 LCSLRRPSEAHTVLFDMMSRGHCPNAVSYTTLINGYCGMGEL 203
>ref|XP_006478000.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g18020-like isoform X1 [Citrus sinensis]
gi|568848405|ref|XP_006478001.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g18020-like isoform X2 [Citrus sinensis]
gi|568848407|ref|XP_006478002.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g18020-like isoform X3 [Citrus sinensis]
gi|568848409|ref|XP_006478003.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g18020-like isoform X4 [Citrus sinensis]
Length = 676
Score = 121 bits (303), Expect(2) = 6e-37
Identities = 62/113 (54%), Positives = 79/113 (69%)
Frame = -3
Query: 472 TRRIHNLCAIDGNVXXXXXXXXXXXLQGYHPDSLNLSSIIHALCDAHRFSEAHQRLLLAV 293
T++IH LC D NV + GY P+SLN+SSIIHALCDA+RF+EAH R LL++
Sbjct: 54 TKKIHRLCTKDRNVDEALRFLDHLRIFGYRPNSLNISSIIHALCDANRFAEAHHRFLLSI 113
Query: 292 SCHSTVPDERTCNVLIARLLHAGTPQATMRVISALFFQKPQFVPSLMNYNRLI 134
S +PDERTCNV+IA LL + P T+RVI L+ KP+FVPSL+NYN L+
Sbjct: 114 SSR-CIPDERTCNVIIACLLGSKNPLDTLRVIGCLYNVKPEFVPSLVNYNCLM 165
Score = 60.5 bits (145), Expect(2) = 6e-37
Identities = 26/40 (65%), Positives = 30/40 (75%)
Frame = -1
Query: 126 GFERIVDAHKLFVDMRKRGHCPNAVSYTTLIDGYCGGGEV 7
G R+ +AHKLF DM+ RGH PN VSYTTLI GYC GE+
Sbjct: 170 GLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEM 209
>ref|XP_006601731.1| PREDICTED: uncharacterized protein LOC100305740 isoform X1 [Glycine
max]
Length = 852
Score = 99.8 bits (247), Expect(2) = 3e-30
Identities = 50/89 (56%), Positives = 68/89 (76%), Gaps = 2/89 (2%)
Frame = -3
Query: 394 QGYHPDSL--NLSSIIHALCDAHRFSEAHQRLLLAVSCHSTVPDERTCNVLIARLLHAGT 221
Q HP N+++IIH+LC++HRFSEAH R L+++ S +PDERTCNVL+ARLL + T
Sbjct: 241 QNAHPQHQHHNIATIIHSLCNSHRFSEAHHRFSLSLASAS-LPDERTCNVLLARLLASRT 299
Query: 220 PQATMRVISALFFQKPQFVPSLMNYNRLI 134
P+AT R++ +L KP FVPSL+NYNRL+
Sbjct: 300 PRATWRLLRSLIASKPGFVPSLVNYNRLM 328
Score = 59.7 bits (143), Expect(2) = 3e-30
Identities = 25/36 (69%), Positives = 28/36 (77%)
Frame = -1
Query: 129 CGFERIVDAHKLFVDMRKRGHCPNAVSYTTLIDGYC 22
CG DAH+LF DMR RGHCPN VS+TTLI+GYC
Sbjct: 332 CGAHLPRDAHRLFFDMRNRGHCPNVVSFTTLINGYC 367
>ref|XP_004492508.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g18020-like [Cicer arietinum]
Length = 667
Score = 90.5 bits (223), Expect(2) = 5e-29
Identities = 44/85 (51%), Positives = 60/85 (70%)
Frame = -3
Query: 388 YHPDSLNLSSIIHALCDAHRFSEAHQRLLLAVSCHSTVPDERTCNVLIARLLHAGTPQAT 209
+ P +++I+H LCD++RFSEAHQR L +S S +PD RTCN+L+ARLL + TP T
Sbjct: 38 FQPSQHTIATIVHTLCDSNRFSEAHQRFSLFLSSGS-IPDHRTCNLLLARLLRSKTPFQT 96
Query: 208 MRVISALFFQKPQFVPSLMNYNRLI 134
+ +L KP FVPSL+NYNRL+
Sbjct: 97 WSLFKSLIQIKPGFVPSLVNYNRLM 121
Score = 64.7 bits (156), Expect(2) = 5e-29
Identities = 27/42 (64%), Positives = 32/42 (76%)
Frame = -1
Query: 129 CGFERIVDAHKLFVDMRKRGHCPNAVSYTTLIDGYCGGGEVR 4
C R +DAH+LF DM+ RGHCPN VSYTTLI+GYC G +R
Sbjct: 125 CLIHRPLDAHRLFFDMKNRGHCPNVVSYTTLINGYCSVGGIR 166