BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00035135
         (550 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234571.1| homeodomain protein [Solanum lycopersicum] g...   134   1e-33

>ref|NP_001234571.1| homeodomain protein [Solanum lycopersicum]
           gi|6723679|emb|CAB67118.1| homeodomain protein [Solanum
           lycopersicum]
          Length = 287

 Score =  134 bits (338), Expect(2) = 1e-33
 Identities = 86/176 (48%), Positives = 96/176 (54%), Gaps = 17/176 (9%)
 Frame = +3

Query: 3   WKTKQLERDYSILKTNYEALQHNYTKVEEEKAGLI-XXXXXXXXXXXXXXXSPAFQRPEE 179
           WKTKQLERDY+ILK+NYEALQHNYTKVE+EK GLI                SP FQRP+E
Sbjct: 104 WKTKQLERDYNILKSNYEALQHNYTKVEQEKEGLITELKGLKEKLGEETLLSPVFQRPQE 163

Query: 180 ILELNPRNNLNXXXXXXXXXXXXXXXXGVMNEENYN--NLNYQPLMPKVSSYNAGLDHXX 353
           I  LN   N +                GVMNEE YN   LNYQ LMPKVSSY+  LDH  
Sbjct: 164 I--LNKLKN-SSDFVDSKDGSSDSDSSGVMNEETYNISTLNYQQLMPKVSSYSNSLDHLS 220

Query: 354 XXXXXXXXXXDPRASSTSSMKMRAYNN--------------QQQAHVGRMEEQNGF 479
                     DPRAS+++S  MRAYNN              QQQ  VGR+EE   F
Sbjct: 221 LSSSTYTQLMDPRASNSTSSSMRAYNNNNNNNDDNNNSNNQQQQQAVGRIEEAKWF 276



 Score = 34.3 bits (77), Expect(2) = 1e-33
 Identities = 13/15 (86%), Positives = 14/15 (93%)
 Frame = +2

Query: 467 AKWVYNRGFLQYLLC 511
           AKW YNRGFLQ+LLC
Sbjct: 273 AKWFYNRGFLQHLLC 287