BLASTX nr result
ID: Atropa21_contig00035052
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00035052
(584 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006355238.1| PREDICTED: mediator of RNA polymerase II tra... 150 2e-59
ref|XP_004246059.1| PREDICTED: mediator of RNA polymerase II tra... 137 1e-55
ref|XP_004301675.1| PREDICTED: mediator of RNA polymerase II tra... 115 5e-44
gb|EMJ10069.1| hypothetical protein PRUPE_ppa026000mg, partial [... 118 6e-44
ref|XP_006854226.1| hypothetical protein AMTR_s00048p00224070 [A... 121 3e-43
ref|XP_002519863.1| DNA helicase recq1, putative [Ricinus commun... 118 8e-43
ref|XP_004512366.1| PREDICTED: mediator of RNA polymerase II tra... 119 4e-42
ref|XP_003612577.1| ATP-dependent DNA helicase RecQ family prote... 114 1e-40
gb|ESW30123.1| hypothetical protein PHAVU_002G126800g [Phaseolus... 111 2e-40
ref|XP_002304389.1| DNA helicase family protein [Populus trichoc... 113 4e-40
ref|XP_003534325.1| PREDICTED: mediator of RNA polymerase II tra... 107 2e-39
ref|XP_006587645.1| PREDICTED: mediator of RNA polymerase II tra... 107 2e-39
gb|EOY25440.1| RECQ helicase L2 isoform 1 [Theobroma cacao] 109 6e-39
ref|XP_006471562.1| PREDICTED: mediator of RNA polymerase II tra... 108 2e-38
ref|XP_002267000.2| PREDICTED: ATP-dependent DNA helicase Q-like... 107 2e-38
ref|XP_006471563.1| PREDICTED: mediator of RNA polymerase II tra... 108 2e-38
ref|XP_004169659.1| PREDICTED: mediator of RNA polymerase II tra... 120 2e-38
emb|CBI29242.3| unnamed protein product [Vitis vinifera] 103 2e-37
ref|XP_006415334.1| hypothetical protein EUTSA_v10006954mg [Eutr... 104 2e-36
gb|EOY25441.1| RECQ helicase L2 isoform 2 [Theobroma cacao] 101 2e-36
>ref|XP_006355238.1| PREDICTED: mediator of RNA polymerase II transcription subunit
34-like [Solanum tuberosum]
Length = 706
Score = 150 bits (378), Expect(3) = 2e-59
Identities = 83/119 (69%), Positives = 86/119 (72%)
Frame = -1
Query: 359 MEQLVIKLILDHVLKEEFQHTAYATNAYVTVGPLAKQVLQGNKIIKVXXXXXXXXXXXXX 180
+EQLVIKL+LDHVLKEEFQHTAYATNAYVTVGPLAKQVLQGNKIIKV
Sbjct: 532 LEQLVIKLVLDHVLKEEFQHTAYATNAYVTVGPLAKQVLQGNKIIKVEMSTRQSRTSSSM 591
Query: 179 XXXXXXXXSGXXXXXXXXXXXLASIHGGIFPHSVLSTQQISTLSAQKPKSIEELEKIIG 3
+G LASIHGGIFPHSVLSTQQISTLS QKPKSIEELEKIIG
Sbjct: 592 KSSKRERSTGLDDKLDELRKELASIHGGIFPHSVLSTQQISTLSGQKPKSIEELEKIIG 650
Score = 102 bits (255), Expect(3) = 2e-59
Identities = 53/67 (79%), Positives = 57/67 (85%), Gaps = 1/67 (1%)
Frame = -3
Query: 576 CHNSQKSSNFA*P-SSCSGMCNNCAYSNEVEELDVSSHAKLIVSMLKDIQENDQRVTMLQ 400
C S +FA P C+GMC+NCA+SNEVEELDVSSHAKLIVSMLKDIQENDQRVTMLQ
Sbjct: 452 CRRSAFFRHFAEPLQECNGMCDNCAFSNEVEELDVSSHAKLIVSMLKDIQENDQRVTMLQ 511
Query: 399 LVEKLKV 379
LVEKLKV
Sbjct: 512 LVEKLKV 518
Score = 23.5 bits (49), Expect(3) = 2e-59
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -2
Query: 391 KTKGPDLKKDEWSNL 347
K GPDLKKDE L
Sbjct: 521 KNLGPDLKKDELEQL 535
>ref|XP_004246059.1| PREDICTED: mediator of RNA polymerase II transcription subunit
34-like [Solanum lycopersicum]
Length = 708
Score = 137 bits (346), Expect(3) = 1e-55
Identities = 81/120 (67%), Positives = 84/120 (70%), Gaps = 1/120 (0%)
Frame = -1
Query: 359 MEQLVIKLILDHVL-KEEFQHTAYATNAYVTVGPLAKQVLQGNKIIKVXXXXXXXXXXXX 183
+EQLVIKL+ VL KEEFQHTAYATNAYVTVGPLAKQVLQGNKIIKV
Sbjct: 532 LEQLVIKLLRASVLHKEEFQHTAYATNAYVTVGPLAKQVLQGNKIIKVELSTRQTRTSSS 591
Query: 182 XXXXXXXXXSGXXXXXXXXXXXLASIHGGIFPHSVLSTQQISTLSAQKPKSIEELEKIIG 3
+G LASIHGGIFPHSVLSTQQISTLSAQKPKSIEELEKIIG
Sbjct: 592 MKSSKRERSTGLNDKLDELRKELASIHGGIFPHSVLSTQQISTLSAQKPKSIEELEKIIG 651
Score = 102 bits (255), Expect(3) = 1e-55
Identities = 53/67 (79%), Positives = 57/67 (85%), Gaps = 1/67 (1%)
Frame = -3
Query: 576 CHNSQKSSNFA*P-SSCSGMCNNCAYSNEVEELDVSSHAKLIVSMLKDIQENDQRVTMLQ 400
C S +FA P C+GMC+NCA+SNEVEELDVSSHAKLIVSMLKDIQENDQRVTMLQ
Sbjct: 452 CRRSAFFRHFAEPLQECNGMCDNCAFSNEVEELDVSSHAKLIVSMLKDIQENDQRVTMLQ 511
Query: 399 LVEKLKV 379
LVEKLKV
Sbjct: 512 LVEKLKV 518
Score = 23.5 bits (49), Expect(3) = 1e-55
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -2
Query: 391 KTKGPDLKKDEWSNL 347
K GPDLKKDE L
Sbjct: 521 KNLGPDLKKDELEQL 535
>ref|XP_004301675.1| PREDICTED: mediator of RNA polymerase II transcription subunit
34-like [Fragaria vesca subsp. vesca]
Length = 708
Score = 115 bits (289), Expect(2) = 5e-44
Identities = 67/126 (53%), Positives = 79/126 (62%)
Frame = -1
Query: 380 SRSEKR*MEQLVIKLILDHVLKEEFQHTAYATNAYVTVGPLAKQVLQGNKIIKVXXXXXX 201
S ++ +EQLVI+LIL VLKEEFQHTAY+TNAYVT+GPLAKQVLQG +K+
Sbjct: 527 SELKREEIEQLVIQLILGRVLKEEFQHTAYSTNAYVTLGPLAKQVLQGRSSVKLEMSTGQ 586
Query: 200 XXXXXXXXXXXXXXXSGXXXXXXXXXXXLASIHGGIFPHSVLSTQQISTLSAQKPKSIEE 21
S L+S HGGIFPHSVLSTQQIS + QKP S+E+
Sbjct: 587 KKVAGVRSVKRSRASSCLEQKLDELRKELSSDHGGIFPHSVLSTQQISMIDDQKPNSMEQ 646
Query: 20 LEKIIG 3
LEKIIG
Sbjct: 647 LEKIIG 652
Score = 88.2 bits (217), Expect(2) = 5e-44
Identities = 40/67 (59%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 576 CHNSQKSSNFA*P-SSCSGMCNNCAYSNEVEELDVSSHAKLIVSMLKDIQENDQRVTMLQ 400
C S +FA P C+GMC+NCA+SNEV+E+DVS HAKL+V++LKD+QEN+QR+T+LQ
Sbjct: 454 CRRSSFFRHFAEPLQDCNGMCDNCAFSNEVKEVDVSRHAKLMVTLLKDVQENEQRLTVLQ 513
Query: 399 LVEKLKV 379
LV+K+K+
Sbjct: 514 LVDKIKI 520
>gb|EMJ10069.1| hypothetical protein PRUPE_ppa026000mg, partial [Prunus persica]
Length = 308
Score = 118 bits (295), Expect(2) = 6e-44
Identities = 67/126 (53%), Positives = 79/126 (62%)
Frame = -1
Query: 380 SRSEKR*MEQLVIKLILDHVLKEEFQHTAYATNAYVTVGPLAKQVLQGNKIIKVXXXXXX 201
S ++ +EQLVIKLILD LKEEFQHTAY+TNAYVT+GPLA QVL G +K+
Sbjct: 126 SELKREEIEQLVIKLILDRSLKEEFQHTAYSTNAYVTIGPLANQVLHGKCSVKLEISSGQ 185
Query: 200 XXXXXXXXXXXXXXXSGXXXXXXXXXXXLASIHGGIFPHSVLSTQQISTLSAQKPKSIEE 21
SG L+S+HGGIFPHSVLSTQQI+ +SAQKP S+E
Sbjct: 186 NKVAGIKSVKRSCASSGLELKLDELRKELSSVHGGIFPHSVLSTQQINMISAQKPNSMEL 245
Query: 20 LEKIIG 3
LE IIG
Sbjct: 246 LENIIG 251
Score = 85.9 bits (211), Expect(2) = 6e-44
Identities = 40/66 (60%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
Frame = -3
Query: 576 CHNSQKSSNFA*P-SSCSGMCNNCAYSNEVEELDVSSHAKLIVSMLKDIQENDQRVTMLQ 400
C S +FA P C+GMC+NCA+SNEV+E+D S HAKLI+S+L+D QENDQR+T+LQ
Sbjct: 53 CRRSSFFRHFAEPLQDCNGMCDNCAFSNEVKEVDASRHAKLIISLLQDTQENDQRLTVLQ 112
Query: 399 LVEKLK 382
LV+K+K
Sbjct: 113 LVDKIK 118
>ref|XP_006854226.1| hypothetical protein AMTR_s00048p00224070 [Amborella trichopoda]
gi|548857895|gb|ERN15693.1| hypothetical protein
AMTR_s00048p00224070 [Amborella trichopoda]
Length = 713
Score = 121 bits (304), Expect(2) = 3e-43
Identities = 61/119 (51%), Positives = 81/119 (68%)
Frame = -1
Query: 359 MEQLVIKLILDHVLKEEFQHTAYATNAYVTVGPLAKQVLQGNKIIKVXXXXXXXXXXXXX 180
+EQL+++L+LD VLKEEFQHTAY+TNAYVT+GPL KQ++QG K++K+
Sbjct: 536 LEQLIVQLVLDRVLKEEFQHTAYSTNAYVTIGPLWKQLVQGKKMVKLEISVNSRGSRTNI 595
Query: 179 XXXXXXXXSGXXXXXXXXXXXLASIHGGIFPHSVLSTQQISTLSAQKPKSIEELEKIIG 3
+G L+S HGGIFPH+VLSTQQISTLS ++P S+E+LEK+IG
Sbjct: 596 KAVKCKHLAGLELKLDDFRKELSSCHGGIFPHAVLSTQQISTLSTERPDSLEQLEKLIG 654
Score = 79.7 bits (195), Expect(2) = 3e-43
Identities = 38/68 (55%), Positives = 51/68 (75%), Gaps = 1/68 (1%)
Frame = -3
Query: 579 SCHNSQKSSNFA*P-SSCSGMCNNCAYSNEVEELDVSSHAKLIVSMLKDIQENDQRVTML 403
SC + +F P C+GMC+NCA+ E +E+D S+ AK+IVS+LK++QENDQR TML
Sbjct: 449 SCRRNAFFHHFGEPLQDCNGMCDNCAHPTETKEVDASTQAKIIVSLLKEMQENDQRATML 508
Query: 402 QLVEKLKV 379
QLV+KLKV
Sbjct: 509 QLVDKLKV 516
>ref|XP_002519863.1| DNA helicase recq1, putative [Ricinus communis]
gi|223540909|gb|EEF42467.1| DNA helicase recq1, putative
[Ricinus communis]
Length = 714
Score = 118 bits (295), Expect(2) = 8e-43
Identities = 67/119 (56%), Positives = 77/119 (64%)
Frame = -1
Query: 359 MEQLVIKLILDHVLKEEFQHTAYATNAYVTVGPLAKQVLQGNKIIKVXXXXXXXXXXXXX 180
+EQLVI+LILD+V KEEFQHTAYATNAYV GPLAKQVLQG KI+K+
Sbjct: 539 IEQLVIQLILDNVFKEEFQHTAYATNAYVKTGPLAKQVLQGRKIVKLEISNKQNKDGKMN 598
Query: 179 XXXXXXXXSGXXXXXXXXXXXLASIHGGIFPHSVLSTQQISTLSAQKPKSIEELEKIIG 3
SG L++ H GI PHSVLS+QQ+S +SAQKP S EELEKIIG
Sbjct: 599 KAKRSLMLSGLEFKLDKLRKELSAEHEGILPHSVLSSQQMSMISAQKPNSTEELEKIIG 657
Score = 82.0 bits (201), Expect(2) = 8e-43
Identities = 38/67 (56%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 579 SCHNSQKSSNFA*P-SSCSGMCNNCAYSNEVEELDVSSHAKLIVSMLKDIQENDQRVTML 403
+C S +F+ P C+GMC+NCA+SNEV E+DV+SHAK +VS+L+D+ +NDQR+TML
Sbjct: 458 TCRRSAFFRHFSEPLQDCNGMCDNCAFSNEVMEVDVTSHAKTMVSLLQDMHDNDQRLTML 517
Query: 402 QLVEKLK 382
QLV+K+K
Sbjct: 518 QLVDKVK 524
>ref|XP_004512366.1| PREDICTED: mediator of RNA polymerase II transcription subunit
34-like [Cicer arietinum]
Length = 704
Score = 119 bits (298), Expect(2) = 4e-42
Identities = 65/119 (54%), Positives = 78/119 (65%)
Frame = -1
Query: 359 MEQLVIKLILDHVLKEEFQHTAYATNAYVTVGPLAKQVLQGNKIIKVXXXXXXXXXXXXX 180
MEQL++ L+LD LKEEFQHTAY+TNAY+TVGPLAKQ+LQG K +K+
Sbjct: 533 MEQLILHLLLDRALKEEFQHTAYSTNAYITVGPLAKQILQGKKTVKL-EVSTEKKTKASV 591
Query: 179 XXXXXXXXSGXXXXXXXXXXXLASIHGGIFPHSVLSTQQISTLSAQKPKSIEELEKIIG 3
SG L+SIHGGI PHSVLSTQQIS L +QKP S+E+LEK+IG
Sbjct: 592 RLKRCLGSSGLELKLDELRKELSSIHGGILPHSVLSTQQISLLCSQKPNSLEQLEKVIG 650
Score = 78.6 bits (192), Expect(2) = 4e-42
Identities = 39/67 (58%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 576 CHNSQKSSNFA*P-SSCSGMCNNCAYSNEVEELDVSSHAKLIVSMLKDIQENDQRVTMLQ 400
C S +FA P C GMC+ CA+S+EV+E+DVS HAKL+VS+L++IQ +DQR TMLQ
Sbjct: 453 CRRSAFFRHFAEPLQECDGMCDICAFSSEVKEVDVSRHAKLMVSLLQEIQTSDQRSTMLQ 512
Query: 399 LVEKLKV 379
LV+K+KV
Sbjct: 513 LVDKMKV 519
>ref|XP_003612577.1| ATP-dependent DNA helicase RecQ family protein expressed [Medicago
truncatula] gi|355513912|gb|AES95535.1| ATP-dependent
DNA helicase RecQ family protein expressed [Medicago
truncatula]
Length = 685
Score = 114 bits (286), Expect(2) = 1e-40
Identities = 64/119 (53%), Positives = 76/119 (63%)
Frame = -1
Query: 359 MEQLVIKLILDHVLKEEFQHTAYATNAYVTVGPLAKQVLQGNKIIKVXXXXXXXXXXXXX 180
MEQL++ L+L+ LKEEFQHTAY+TNAY+TVGPLAKQ+LQG K +K+
Sbjct: 515 MEQLILHLLLERALKEEFQHTAYSTNAYITVGPLAKQILQGKKTVKL-EISTEEKTKASA 573
Query: 179 XXXXXXXXSGXXXXXXXXXXXLASIHGGIFPHSVLSTQQISTLSAQKPKSIEELEKIIG 3
SG L+S HGGI PHSVLSTQQIS L +QKP S+EELEK IG
Sbjct: 574 RLKRSLGSSGLELKLDELRKELSSNHGGILPHSVLSTQQISLLCSQKPNSLEELEKAIG 632
Score = 78.2 bits (191), Expect(2) = 1e-40
Identities = 40/66 (60%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Frame = -3
Query: 576 CHNSQKSSNFA*P-SSCSGMCNNCAYSNEVEELDVSSHAKLIVSMLKDIQENDQRVTMLQ 400
C S +FA P C+GMC+ CA+S EV E+DVS HAKL+VS+L+DIQ +DQR TMLQ
Sbjct: 435 CRRSAFFRHFAEPLQECNGMCDICAFSCEVNEVDVSRHAKLMVSLLQDIQASDQRSTMLQ 494
Query: 399 LVEKLK 382
LVEK+K
Sbjct: 495 LVEKMK 500
>gb|ESW30123.1| hypothetical protein PHAVU_002G126800g [Phaseolus vulgaris]
Length = 702
Score = 111 bits (277), Expect(2) = 2e-40
Identities = 60/118 (50%), Positives = 73/118 (61%)
Frame = -1
Query: 356 EQLVIKLILDHVLKEEFQHTAYATNAYVTVGPLAKQVLQGNKIIKVXXXXXXXXXXXXXX 177
EQL++ L+L LKEEFQHTAYATNAY+ VGPLAKQ+LQG K + +
Sbjct: 531 EQLILHLLLGRFLKEEFQHTAYATNAYIAVGPLAKQILQGKKSVTLEIYTEHRTKAALRS 590
Query: 176 XXXXXXXSGXXXXXXXXXXXLASIHGGIFPHSVLSTQQISTLSAQKPKSIEELEKIIG 3
S L+S HGGI PHSVLST+QIS LS+QKP S+E+LEK+IG
Sbjct: 591 VKRSLESSDLELKLDELRKELSSAHGGILPHSVLSTEQISLLSSQKPNSLEQLEKVIG 648
Score = 80.9 bits (198), Expect(2) = 2e-40
Identities = 39/67 (58%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 576 CHNSQKSSNFA*P-SSCSGMCNNCAYSNEVEELDVSSHAKLIVSMLKDIQENDQRVTMLQ 400
C S +FA P C+GMC+ CA+S EV+E+DVS HAKL+VS+L+D+Q NDQR TMLQ
Sbjct: 450 CRRSAFFRHFAEPLQECNGMCDICAFSREVKEMDVSDHAKLMVSLLQDMQVNDQRSTMLQ 509
Query: 399 LVEKLKV 379
LV+K+K+
Sbjct: 510 LVDKMKI 516
>ref|XP_002304389.1| DNA helicase family protein [Populus trichocarpa]
gi|222841821|gb|EEE79368.1| DNA helicase family protein
[Populus trichocarpa]
Length = 718
Score = 113 bits (282), Expect(2) = 4e-40
Identities = 69/129 (53%), Positives = 81/129 (62%), Gaps = 6/129 (4%)
Frame = -1
Query: 371 EKR*MEQLVIKLILDHVLKEEFQHTAYATNAYVTVGPLAKQVLQGNKIIKV-XXXXXXXX 195
+K MEQLVI+LILD V KEE+QHTAYATNAYVT+GPLA QVLQG KI+K+
Sbjct: 531 KKEEMEQLVIQLILDFVFKEEYQHTAYATNAYVTIGPLANQVLQGKKIVKLEISSKQKNK 590
Query: 194 XXXXXXXXXXXXXSGXXXXXXXXXXXLASIHGGIFPHSVLSTQQISTLSAQKPKSIEE-- 21
SG L+S HGGIFPHSVLS+QQ+S +S+QKP S +E
Sbjct: 591 GDSMKSAKHSLAFSGLELKLDELREKLSSGHGGIFPHSVLSSQQMSMISSQKPSSAQEAS 650
Query: 20 ---LEKIIG 3
LEKIIG
Sbjct: 651 PYHLEKIIG 659
Score = 77.8 bits (190), Expect(2) = 4e-40
Identities = 37/66 (56%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Frame = -3
Query: 576 CHNSQKSSNFA*P-SSCSGMCNNCAYSNEVEELDVSSHAKLIVSMLKDIQENDQRVTMLQ 400
C + +FA P C+GMC+NCA+ +EV E+DVS HAK++VS+L+D QE DQR+TMLQ
Sbjct: 456 CRRNAFFRHFAEPLQDCNGMCDNCAFLSEVMEVDVSRHAKVMVSLLQDTQEKDQRLTMLQ 515
Query: 399 LVEKLK 382
LV+K+K
Sbjct: 516 LVDKMK 521
>ref|XP_003534325.1| PREDICTED: mediator of RNA polymerase II transcription subunit
34-like isoform X1 [Glycine max]
Length = 695
Score = 107 bits (268), Expect(2) = 2e-39
Identities = 59/126 (46%), Positives = 76/126 (60%)
Frame = -1
Query: 380 SRSEKR*MEQLVIKLILDHVLKEEFQHTAYATNAYVTVGPLAKQVLQGNKIIKVXXXXXX 201
S ++ +EQL++ L+L LKEEFQHT YATNAY+ VG LAKQ+LQG K +K+
Sbjct: 523 SELKREEIEQLILHLLLARFLKEEFQHTPYATNAYIAVGSLAKQILQGKKSVKLEIYTEQ 582
Query: 200 XXXXXXXXXXXXXXXSGXXXXXXXXXXXLASIHGGIFPHSVLSTQQISTLSAQKPKSIEE 21
SG L+S HGGI PHSVLST+QI L++QKP S+E+
Sbjct: 583 RTKDGVRSAKQCLGSSGLELKLDELRKELSSAHGGILPHSVLSTEQIIQLASQKPNSLEQ 642
Query: 20 LEKIIG 3
LEK+IG
Sbjct: 643 LEKLIG 648
Score = 81.3 bits (199), Expect(2) = 2e-39
Identities = 39/67 (58%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 576 CHNSQKSSNFA*P-SSCSGMCNNCAYSNEVEELDVSSHAKLIVSMLKDIQENDQRVTMLQ 400
C S +FA P C+GMC+ CA+S+EV+E+DVS HAKL+VS+L+D+Q NDQR TMLQ
Sbjct: 450 CRRSAFFHHFAEPLQECNGMCDICAFSSEVKEVDVSGHAKLMVSLLQDMQANDQRSTMLQ 509
Query: 399 LVEKLKV 379
LV+K+K+
Sbjct: 510 LVDKMKI 516
>ref|XP_006587645.1| PREDICTED: mediator of RNA polymerase II transcription subunit
34-like isoform X2 [Glycine max]
Length = 690
Score = 107 bits (268), Expect(2) = 2e-39
Identities = 59/126 (46%), Positives = 76/126 (60%)
Frame = -1
Query: 380 SRSEKR*MEQLVIKLILDHVLKEEFQHTAYATNAYVTVGPLAKQVLQGNKIIKVXXXXXX 201
S ++ +EQL++ L+L LKEEFQHT YATNAY+ VG LAKQ+LQG K +K+
Sbjct: 518 SELKREEIEQLILHLLLARFLKEEFQHTPYATNAYIAVGSLAKQILQGKKSVKLEIYTEQ 577
Query: 200 XXXXXXXXXXXXXXXSGXXXXXXXXXXXLASIHGGIFPHSVLSTQQISTLSAQKPKSIEE 21
SG L+S HGGI PHSVLST+QI L++QKP S+E+
Sbjct: 578 RTKDGVRSAKQCLGSSGLELKLDELRKELSSAHGGILPHSVLSTEQIIQLASQKPNSLEQ 637
Query: 20 LEKIIG 3
LEK+IG
Sbjct: 638 LEKLIG 643
Score = 81.3 bits (199), Expect(2) = 2e-39
Identities = 39/67 (58%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 576 CHNSQKSSNFA*P-SSCSGMCNNCAYSNEVEELDVSSHAKLIVSMLKDIQENDQRVTMLQ 400
C S +FA P C+GMC+ CA+S+EV+E+DVS HAKL+VS+L+D+Q NDQR TMLQ
Sbjct: 445 CRRSAFFHHFAEPLQECNGMCDICAFSSEVKEVDVSGHAKLMVSLLQDMQANDQRSTMLQ 504
Query: 399 LVEKLKV 379
LV+K+K+
Sbjct: 505 LVDKMKI 511
>gb|EOY25440.1| RECQ helicase L2 isoform 1 [Theobroma cacao]
Length = 709
Score = 109 bits (273), Expect(2) = 6e-39
Identities = 64/120 (53%), Positives = 74/120 (61%), Gaps = 1/120 (0%)
Frame = -1
Query: 359 MEQLVIKLILDHVLKEEFQHTAYATNAYVTVGPLAKQVLQGNKIIKVXXXXXXXXXXXXX 180
+EQLV++LILD VLKE+FQHTAYATNAY+TVG A Q+LQG KI+K+
Sbjct: 531 LEQLVVQLILDRVLKEDFQHTAYATNAYITVGTSANQILQGKKIVKMEVAGRSKVMDSYR 590
Query: 179 XXXXXXXXSGXXXXXXXXXXXLASIHGG-IFPHSVLSTQQISTLSAQKPKSIEELEKIIG 3
SG LAS H G IFPHSVLS QQIS +S +KP S EELE IIG
Sbjct: 591 KSIKHGVTSGLEFKLDELRKELASSHNGEIFPHSVLSGQQISIISTKKPSSTEELEMIIG 650
Score = 77.4 bits (189), Expect(2) = 6e-39
Identities = 35/66 (53%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Frame = -3
Query: 576 CHNSQKSSNFA*P-SSCSGMCNNCAYSNEVEELDVSSHAKLIVSMLKDIQENDQRVTMLQ 400
CH +FA P C+GMC++CA+S+EV+E+D S AKL++S++ D+QEN+QRVTMLQ
Sbjct: 451 CHRGAFFQHFAEPLQECNGMCDSCAFSSEVKEVDASCQAKLMISLVHDMQENNQRVTMLQ 510
Query: 399 LVEKLK 382
LV+++K
Sbjct: 511 LVDRVK 516
>ref|XP_006471562.1| PREDICTED: mediator of RNA polymerase II transcription subunit
34-like isoform X1 [Citrus sinensis]
Length = 715
Score = 108 bits (269), Expect(2) = 2e-38
Identities = 64/120 (53%), Positives = 76/120 (63%), Gaps = 1/120 (0%)
Frame = -1
Query: 359 MEQLVIKLILDHVLKEEFQHTAYATNAYVTVGPLAKQVLQGNKIIKV-XXXXXXXXXXXX 183
+EQLV++LI+D VL EEFQHTAY+TNAYVT+GPLAK VLQG KIIK+
Sbjct: 534 IEQLVLQLIIDRVLSEEFQHTAYSTNAYVTIGPLAKLVLQGKKIIKLEISSVQKNTADNK 593
Query: 182 XXXXXXXXXSGXXXXXXXXXXXLASIHGGIFPHSVLSTQQISTLSAQKPKSIEELEKIIG 3
S LASI GGI PHSVLS+Q I +SA+KP ++EELEKIIG
Sbjct: 594 KSTKRSLTSSALEFELDELRKELASISGGILPHSVLSSQLIRLISARKPSTMEELEKIIG 653
Score = 77.4 bits (189), Expect(2) = 2e-38
Identities = 36/69 (52%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Frame = -3
Query: 576 CHNSQKSSNFA*P-SSCSGMCNNCAYSNEVEELDVSSHAKLIVSMLKDIQENDQRVTMLQ 400
C S +FA P C+GMC+ CA+S EV E+DV+ HA+ I+S+L+DIQ+N+QR+TMLQ
Sbjct: 454 CRRSTFFRHFAEPLQDCNGMCDICAFSYEVNEVDVTRHAQCIISLLQDIQDNNQRLTMLQ 513
Query: 399 LVEKLKVPI 373
LV+K+K+ +
Sbjct: 514 LVDKMKIKL 522
>ref|XP_002267000.2| PREDICTED: ATP-dependent DNA helicase Q-like 2-like [Vitis
vinifera]
Length = 711
Score = 107 bits (267), Expect(2) = 2e-38
Identities = 67/123 (54%), Positives = 75/123 (60%), Gaps = 1/123 (0%)
Frame = -1
Query: 368 KR*MEQLVIKLILDHVLKEEFQHTAYATNAYVTVGPLAKQVLQGNKIIKV-XXXXXXXXX 192
K +E LVI+LI D VLKEEFQHTAYATNAYVT+G L KQV G +I+K+
Sbjct: 529 KEEIEHLVIQLIRDRVLKEEFQHTAYATNAYVTLGLLWKQVSHGKRIVKLEISTKVKTKT 588
Query: 191 XXXXXXXXXXXXSGXXXXXXXXXXXLASIHGGIFPHSVLSTQQISTLSAQKPKSIEELEK 12
SG L+S HGGIFPHSVLSTQQIS LSAQKP SI ELE
Sbjct: 589 GNMKSSKRSLTSSGLELKLDELRKELSSTHGGIFPHSVLSTQQISILSAQKPTSILELET 648
Query: 11 IIG 3
+IG
Sbjct: 649 MIG 651
Score = 78.2 bits (191), Expect(2) = 2e-38
Identities = 36/67 (53%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 576 CHNSQKSSNFA*P-SSCSGMCNNCAYSNEVEELDVSSHAKLIVSMLKDIQENDQRVTMLQ 400
C + +FA P C+GMC+NCA+S EV+E+DVS AK ++S+L+D+Q+NDQR+TMLQ
Sbjct: 452 CRRNAFFRHFAEPLQDCNGMCDNCAFSTEVKEVDVSCLAKAMISLLQDMQDNDQRLTMLQ 511
Query: 399 LVEKLKV 379
+V+K+KV
Sbjct: 512 MVDKMKV 518
>ref|XP_006471563.1| PREDICTED: mediator of RNA polymerase II transcription subunit
34-like isoform X2 [Citrus sinensis]
Length = 567
Score = 108 bits (269), Expect(2) = 2e-38
Identities = 64/120 (53%), Positives = 76/120 (63%), Gaps = 1/120 (0%)
Frame = -1
Query: 359 MEQLVIKLILDHVLKEEFQHTAYATNAYVTVGPLAKQVLQGNKIIKV-XXXXXXXXXXXX 183
+EQLV++LI+D VL EEFQHTAY+TNAYVT+GPLAK VLQG KIIK+
Sbjct: 386 IEQLVLQLIIDRVLSEEFQHTAYSTNAYVTIGPLAKLVLQGKKIIKLEISSVQKNTADNK 445
Query: 182 XXXXXXXXXSGXXXXXXXXXXXLASIHGGIFPHSVLSTQQISTLSAQKPKSIEELEKIIG 3
S LASI GGI PHSVLS+Q I +SA+KP ++EELEKIIG
Sbjct: 446 KSTKRSLTSSALEFELDELRKELASISGGILPHSVLSSQLIRLISARKPSTMEELEKIIG 505
Score = 77.4 bits (189), Expect(2) = 2e-38
Identities = 36/69 (52%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Frame = -3
Query: 576 CHNSQKSSNFA*P-SSCSGMCNNCAYSNEVEELDVSSHAKLIVSMLKDIQENDQRVTMLQ 400
C S +FA P C+GMC+ CA+S EV E+DV+ HA+ I+S+L+DIQ+N+QR+TMLQ
Sbjct: 306 CRRSTFFRHFAEPLQDCNGMCDICAFSYEVNEVDVTRHAQCIISLLQDIQDNNQRLTMLQ 365
Query: 399 LVEKLKVPI 373
LV+K+K+ +
Sbjct: 366 LVDKMKIKL 374
>ref|XP_004169659.1| PREDICTED: mediator of RNA polymerase II transcription subunit
34-like [Cucumis sativus]
Length = 237
Score = 120 bits (302), Expect(2) = 2e-38
Identities = 69/122 (56%), Positives = 81/122 (66%)
Frame = -1
Query: 368 KR*MEQLVIKLILDHVLKEEFQHTAYATNAYVTVGPLAKQVLQGNKIIKVXXXXXXXXXX 189
K +EQL+I+L+LD VLKEEFQHTAYATNAYVTVGPLA+QVLQG K++K+
Sbjct: 59 KEEIEQLIIQLLLDRVLKEEFQHTAYATNAYVTVGPLARQVLQGKKVVKI-EISGKQKVT 117
Query: 188 XXXXXXXXXXXSGXXXXXXXXXXXLASIHGGIFPHSVLSTQQISTLSAQKPKSIEELEKI 9
SG LASI GGIFPHSVLSTQQI LSAQKP S+++LE +
Sbjct: 118 GVKSKRKSVAPSGLECKLDKLRKELASIDGGIFPHSVLSTQQIVVLSAQKPTSLDQLETM 177
Query: 8 IG 3
IG
Sbjct: 178 IG 179
Score = 64.3 bits (155), Expect(2) = 2e-38
Identities = 27/47 (57%), Positives = 44/47 (93%)
Frame = -3
Query: 522 MCNNCAYSNEVEELDVSSHAKLIVSMLKDIQENDQRVTMLQLVEKLK 382
MC+ CA ++EV+E+DV SHA++I+S+L+D+Q+++Q++TMLQLV+KLK
Sbjct: 1 MCDLCAVASEVKEVDVCSHARVIISILQDVQKSNQKMTMLQLVDKLK 47
>emb|CBI29242.3| unnamed protein product [Vitis vinifera]
Length = 710
Score = 103 bits (258), Expect(2) = 2e-37
Identities = 65/123 (52%), Positives = 74/123 (60%), Gaps = 1/123 (0%)
Frame = -1
Query: 368 KR*MEQLVIKLILDHVLKEEFQHTAYATNAYVTVGPLAKQVLQGNKIIKV-XXXXXXXXX 192
K +E LVI+LI D VLKEEFQHTAYATNAYVT+G L KQV G +I+K+
Sbjct: 529 KEEIEHLVIQLIRDRVLKEEFQHTAYATNAYVTLGLLWKQVSHGKRIVKLEISTKVKTKT 588
Query: 191 XXXXXXXXXXXXSGXXXXXXXXXXXLASIHGGIFPHSVLSTQQISTLSAQKPKSIEELEK 12
SG L+S HGGIFPHSVLSTQQIS LSAQKP SI E +
Sbjct: 589 GNMKSSKRSLTSSGLELKLDELRKELSSTHGGIFPHSVLSTQQISILSAQKPTSILEAKT 648
Query: 11 IIG 3
+IG
Sbjct: 649 MIG 651
Score = 78.2 bits (191), Expect(2) = 2e-37
Identities = 36/67 (53%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 576 CHNSQKSSNFA*P-SSCSGMCNNCAYSNEVEELDVSSHAKLIVSMLKDIQENDQRVTMLQ 400
C + +FA P C+GMC+NCA+S EV+E+DVS AK ++S+L+D+Q+NDQR+TMLQ
Sbjct: 452 CRRNAFFRHFAEPLQDCNGMCDNCAFSTEVKEVDVSCLAKAMISLLQDMQDNDQRLTMLQ 511
Query: 399 LVEKLKV 379
+V+K+KV
Sbjct: 512 MVDKMKV 518
>ref|XP_006415334.1| hypothetical protein EUTSA_v10006954mg [Eutrema salsugineum]
gi|557093105|gb|ESQ33687.1| hypothetical protein
EUTSA_v10006954mg [Eutrema salsugineum]
Length = 706
Score = 104 bits (260), Expect(2) = 2e-36
Identities = 59/119 (49%), Positives = 73/119 (61%)
Frame = -1
Query: 359 MEQLVIKLILDHVLKEEFQHTAYATNAYVTVGPLAKQVLQGNKIIKVXXXXXXXXXXXXX 180
+E LVIKLI+D VLKEEFQHT Y+TNAYVT GPLA Q+LQG K IK
Sbjct: 531 IEHLVIKLIVDSVLKEEFQHTPYSTNAYVTTGPLANQLLQGRKTIKT----ETSSRQINK 586
Query: 179 XXXXXXXXSGXXXXXXXXXXXLASIHGGIFPHSVLSTQQISTLSAQKPKSIEELEKIIG 3
SG +++ HG I PH+VLSTQQI ++S++KP S++ELE IIG
Sbjct: 587 KSKRSVSYSGIEFKLDELRKEISAAHGSILPHTVLSTQQIGSISSRKPDSLQELESIIG 645
Score = 73.9 bits (180), Expect(2) = 2e-36
Identities = 37/66 (56%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Frame = -3
Query: 576 CHNSQKSSNFA*PSS-CSGMCNNCAYSNEVEELDVSSHAKLIVSMLKDIQENDQRVTMLQ 400
C S +F PS C+GMC+NCA S+EV+E+DVS AKL+VSM++++Q DQRVTMLQ
Sbjct: 451 CRRSAFFRHFGEPSQDCNGMCDNCALSSEVKEVDVSDLAKLVVSMVQEMQAKDQRVTMLQ 510
Query: 399 LVEKLK 382
L +KL+
Sbjct: 511 LGDKLR 516
>gb|EOY25441.1| RECQ helicase L2 isoform 2 [Theobroma cacao]
Length = 668
Score = 101 bits (251), Expect(2) = 2e-36
Identities = 59/114 (51%), Positives = 69/114 (60%), Gaps = 1/114 (0%)
Frame = -1
Query: 359 MEQLVIKLILDHVLKEEFQHTAYATNAYVTVGPLAKQVLQGNKIIKVXXXXXXXXXXXXX 180
+EQLV++LILD VLKE+FQHTAYATNAY+TVG A Q+LQG KI+K+
Sbjct: 531 LEQLVVQLILDRVLKEDFQHTAYATNAYITVGTSANQILQGKKIVKMEVAGRSKVMDSYR 590
Query: 179 XXXXXXXXSGXXXXXXXXXXXLASIHGG-IFPHSVLSTQQISTLSAQKPKSIEE 21
SG LAS H G IFPHSVLS QQIS +S +KP S EE
Sbjct: 591 KSIKHGVTSGLEFKLDELRKELASSHNGEIFPHSVLSGQQISIISTKKPSSTEE 644
Score = 77.4 bits (189), Expect(2) = 2e-36
Identities = 35/66 (53%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Frame = -3
Query: 576 CHNSQKSSNFA*P-SSCSGMCNNCAYSNEVEELDVSSHAKLIVSMLKDIQENDQRVTMLQ 400
CH +FA P C+GMC++CA+S+EV+E+D S AKL++S++ D+QEN+QRVTMLQ
Sbjct: 451 CHRGAFFQHFAEPLQECNGMCDSCAFSSEVKEVDASCQAKLMISLVHDMQENNQRVTMLQ 510
Query: 399 LVEKLK 382
LV+++K
Sbjct: 511 LVDRVK 516