BLASTX nr result

ID: Atropa21_contig00034872 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00034872
         (536 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006354277.1| PREDICTED: uncharacterized protein LOC102592...    66   4e-09
gb|AEH25587.1| transposase [Solanum demissum]                          64   2e-08

>ref|XP_006354277.1| PREDICTED: uncharacterized protein LOC102592702 [Solanum tuberosum]
          Length = 575

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 49/145 (33%), Positives = 67/145 (46%)
 Frame = -1

Query: 458 AEFHASFSPPLEFHASSSITERGRGSGRDNTTLYKGTRVTKWVXXXXXXXXXXXXXXXXX 279
           A +H   S P ++  ++S   +GRG GR +TT YK   V                     
Sbjct: 458 ANYHVGSSTPADYQLTNS--NKGRGRGRGSTTSYKRQAV--------------------- 494

Query: 278 XXFYVHVEVKTKVLLFFCLQPGMSRNKIYSTDTSKISRSADVTGDIXXXXXXXXXXXXXX 99
               + + V      F  L PGMS  KI+ST T+K+++SADVTGDI              
Sbjct: 495 ----IGMGVFQDENGFKALNPGMSSCKIFSTGTTKVTKSADVTGDIGYKLSTAPKLKWNG 550

Query: 98  XXAITTRKPQEIKEQQRMKKGPRSS 24
             AI+TRK QE++E+QR K    SS
Sbjct: 551 KAAISTRKLQEMREEQRKKSKGSSS 575


>gb|AEH25587.1| transposase [Solanum demissum]
          Length = 1124

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 48/145 (33%), Positives = 66/145 (45%)
 Frame = -1

Query: 458  AEFHASFSPPLEFHASSSITERGRGSGRDNTTLYKGTRVTKWVXXXXXXXXXXXXXXXXX 279
            A +H   S P ++  ++S   +GRG GR +TT YK   V                     
Sbjct: 1007 ANYHVGSSTPADYQLTNS--NKGRGRGRGSTTSYKRQTV--------------------- 1043

Query: 278  XXFYVHVEVKTKVLLFFCLQPGMSRNKIYSTDTSKISRSADVTGDIXXXXXXXXXXXXXX 99
                + + V      F  L PGMS  KI+ST T+K+++SADVTGDI              
Sbjct: 1044 ----IGMGVFQDENGFKALNPGMSSCKIFSTGTTKVTKSADVTGDIGYKPSTAPKLKWNG 1099

Query: 98   XXAITTRKPQEIKEQQRMKKGPRSS 24
              AI+T K QE++E+QR K    SS
Sbjct: 1100 KAAISTSKLQEMREEQRKKSKGSSS 1124


Top