BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00034813
         (771 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006355109.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    74   1e-18
ref|XP_004238823.1| PREDICTED: E3 ubiquitin-protein ligase Praja...    72   1e-18
ref|XP_004238824.1| PREDICTED: E3 ubiquitin-protein ligase Praja...    72   1e-18
ref|XP_002311305.1| zinc finger family protein [Populus trichoca...    42   1e-06
gb|ABK96350.1| unknown [Populus trichocarpa x Populus deltoides]       42   1e-06
gb|ABK95155.1| unknown [Populus trichocarpa]                           42   1e-06
ref|XP_002522447.1| zinc finger protein, putative [Ricinus commu...    45   2e-06
ref|XP_002316133.1| zinc finger family protein [Populus trichoca...    42   2e-06

>ref|XP_006355109.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Solanum
           tuberosum]
          Length = 207

 Score = 73.6 bits (179), Expect(2) = 1e-18
 Identities = 45/90 (50%), Positives = 54/90 (60%)
 Frame = +1

Query: 307 LHKSLMNSTNKDLSLFLTFILAFTNNSISSNQVRD*TNPDQEIQ*SRIPYEFFDRLILVN 486
           L ++LMNS N DLSLFL FIL+ TNNSISS       NPD+E   S    EF DR+ILVN
Sbjct: 11  LMENLMNSRNIDLSLFLPFILSITNNSISS-------NPDEETDESTTQSEFSDRIILVN 63

Query: 487 LLTQRIVVIKXXXXXXXXXXXXELMINEGQ 576
            LTQ ++V++            ELM  EGQ
Sbjct: 64  PLTQNMIVMETRSSTTLDSFLNELMSKEGQ 93



 Score = 46.6 bits (109), Expect(2) = 1e-18
 Identities = 23/33 (69%), Positives = 28/33 (84%)
 Frame = +3

Query: 579 PASKASIDALQSVEICEEEAEKGGCAICLVEFL 677
           PASKASIDAL +VEIC EE EKG C+ICL +++
Sbjct: 95  PASKASIDALSTVEIC-EEGEKGECSICLDDWV 126


>ref|XP_004238823.1| PREDICTED: E3 ubiquitin-protein ligase Praja-1-like isoform 1
           [Solanum lycopersicum]
          Length = 206

 Score = 72.0 bits (175), Expect(2) = 1e-18
 Identities = 44/90 (48%), Positives = 54/90 (60%)
 Frame = +1

Query: 307 LHKSLMNSTNKDLSLFLTFILAFTNNSISSNQVRD*TNPDQEIQ*SRIPYEFFDRLILVN 486
           L ++LMNS N+D SLFL FIL+ TNNSISS       NPD+E   S    EF DR+ILVN
Sbjct: 11  LMENLMNSGNRDSSLFLPFILSITNNSISS-------NPDEESDESTTRSEFSDRIILVN 63

Query: 487 LLTQRIVVIKXXXXXXXXXXXXELMINEGQ 576
            LTQ ++V++            ELM  EGQ
Sbjct: 64  PLTQNMIVMETRSSTTLDSFLNELMSKEGQ 93



 Score = 47.8 bits (112), Expect(2) = 1e-18
 Identities = 24/29 (82%), Positives = 26/29 (89%)
 Frame = +3

Query: 579 PASKASIDALQSVEICEEEAEKGGCAICL 665
           PASKASIDAL+SVEIC EE EKG C+ICL
Sbjct: 95  PASKASIDALKSVEIC-EEGEKGECSICL 122


>ref|XP_004238824.1| PREDICTED: E3 ubiquitin-protein ligase Praja-1-like isoform 2
           [Solanum lycopersicum]
          Length = 156

 Score = 72.0 bits (175), Expect(2) = 1e-18
 Identities = 44/90 (48%), Positives = 54/90 (60%)
 Frame = +1

Query: 307 LHKSLMNSTNKDLSLFLTFILAFTNNSISSNQVRD*TNPDQEIQ*SRIPYEFFDRLILVN 486
           L ++LMNS N+D SLFL FIL+ TNNSISS       NPD+E   S    EF DR+ILVN
Sbjct: 11  LMENLMNSGNRDSSLFLPFILSITNNSISS-------NPDEESDESTTRSEFSDRIILVN 63

Query: 487 LLTQRIVVIKXXXXXXXXXXXXELMINEGQ 576
            LTQ ++V++            ELM  EGQ
Sbjct: 64  PLTQNMIVMETRSSTTLDSFLNELMSKEGQ 93



 Score = 47.8 bits (112), Expect(2) = 1e-18
 Identities = 24/29 (82%), Positives = 26/29 (89%)
 Frame = +3

Query: 579 PASKASIDALQSVEICEEEAEKGGCAICL 665
           PASKASIDAL+SVEIC EE EKG C+ICL
Sbjct: 95  PASKASIDALKSVEIC-EEGEKGECSICL 122


>ref|XP_002311305.1| zinc finger family protein [Populus trichocarpa]
           gi|222851125|gb|EEE88672.1| zinc finger family protein
           [Populus trichocarpa]
          Length = 225

 Score = 41.6 bits (96), Expect(2) = 1e-06
 Identities = 31/61 (50%), Positives = 40/61 (65%)
 Frame = +1

Query: 334 NKDLSLFLTFILAFTNNSISSNQVRD*TNPDQEIQ*SRIPYEFFDRLILVNLLTQRIVVI 513
           ++DLSLFL FI  FT  S +S + RD   PDQE Q +  P E   R+IL+N LTQ +VVI
Sbjct: 21  HRDLSLFLPFIFGFT--STNSTEERD---PDQEPQ-TTDPNE---RIILINPLTQGMVVI 71

Query: 514 K 516
           +
Sbjct: 72  E 72



 Score = 38.1 bits (87), Expect(2) = 1e-06
 Identities = 20/32 (62%), Positives = 25/32 (78%)
 Frame = +3

Query: 579 PASKASIDALQSVEICEEEAEKGGCAICLVEF 674
           PASKASI+A+ SVEI E+  + G CAICL E+
Sbjct: 92  PASKASIEAMPSVEIGEDNKD-GECAICLEEW 122


>gb|ABK96350.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 225

 Score = 41.6 bits (96), Expect(2) = 1e-06
 Identities = 31/61 (50%), Positives = 40/61 (65%)
 Frame = +1

Query: 334 NKDLSLFLTFILAFTNNSISSNQVRD*TNPDQEIQ*SRIPYEFFDRLILVNLLTQRIVVI 513
           ++DLSLFL FI  FT  S +S + RD   PDQE Q +  P E   R+IL+N LTQ +VVI
Sbjct: 21  HRDLSLFLPFIFGFT--STNSTEERD---PDQEPQ-TTDPNE---RIILINPLTQGMVVI 71

Query: 514 K 516
           +
Sbjct: 72  E 72



 Score = 38.1 bits (87), Expect(2) = 1e-06
 Identities = 20/32 (62%), Positives = 25/32 (78%)
 Frame = +3

Query: 579 PASKASIDALQSVEICEEEAEKGGCAICLVEF 674
           PASKASI+A+ SVEI E+  + G CAICL E+
Sbjct: 92  PASKASIEAMPSVEIGEDNKD-GECAICLEEW 122


>gb|ABK95155.1| unknown [Populus trichocarpa]
          Length = 212

 Score = 41.6 bits (96), Expect(2) = 1e-06
 Identities = 31/61 (50%), Positives = 40/61 (65%)
 Frame = +1

Query: 334 NKDLSLFLTFILAFTNNSISSNQVRD*TNPDQEIQ*SRIPYEFFDRLILVNLLTQRIVVI 513
           ++DLSLFL FI  FT  S +S + RD   PDQE Q +  P E   R+IL+N LTQ +VVI
Sbjct: 8   HRDLSLFLPFIFGFT--STNSTEERD---PDQEPQ-TTDPNE---RIILINPLTQGMVVI 58

Query: 514 K 516
           +
Sbjct: 59  E 59



 Score = 38.1 bits (87), Expect(2) = 1e-06
 Identities = 20/32 (62%), Positives = 25/32 (78%)
 Frame = +3

Query: 579 PASKASIDALQSVEICEEEAEKGGCAICLVEF 674
           PASKASI+A+ SVEI E+  + G CAICL E+
Sbjct: 79  PASKASIEAMPSVEIGEDNKD-GECAICLEEW 109


>ref|XP_002522447.1| zinc finger protein, putative [Ricinus communis]
           gi|223538332|gb|EEF39939.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 233

 Score = 45.4 bits (106), Expect(2) = 2e-06
 Identities = 28/61 (45%), Positives = 40/61 (65%)
 Frame = +1

Query: 334 NKDLSLFLTFILAFTNNSISSNQVRD*TNPDQEIQ*SRIPYEFFDRLILVNLLTQRIVVI 513
           ++DLSLFL FIL FT+ + ++N      NPDQE Q +   +E   R+IL+N  TQ +VVI
Sbjct: 20  HRDLSLFLPFILGFTSTTTNTNT----ENPDQENQETTSRHE---RIILINPFTQGMVVI 72

Query: 514 K 516
           +
Sbjct: 73  E 73



 Score = 33.1 bits (74), Expect(2) = 2e-06
 Identities = 16/32 (50%), Positives = 22/32 (68%)
 Frame = +3

Query: 579 PASKASIDALQSVEICEEEAEKGGCAICLVEF 674
           PAS+ASI++L SV++ E       CAICL E+
Sbjct: 93  PASRASIESLPSVDVQEIGDRDSECAICLEEW 124


>ref|XP_002316133.1| zinc finger family protein [Populus trichocarpa]
           gi|118483434|gb|ABK93617.1| unknown [Populus
           trichocarpa] gi|222865173|gb|EEF02304.1| zinc finger
           family protein [Populus trichocarpa]
          Length = 218

 Score = 42.0 bits (97), Expect(2) = 2e-06
 Identities = 29/61 (47%), Positives = 39/61 (63%)
 Frame = +1

Query: 334 NKDLSLFLTFILAFTNNSISSNQVRD*TNPDQEIQ*SRIPYEFFDRLILVNLLTQRIVVI 513
           ++DLSLFL FIL FT  S ++ + RD   PDQE   +  P E   R+IL+N  TQ +VVI
Sbjct: 21  HRDLSLFLPFILGFT--STNTTEQRD---PDQEAPQTTDPNE---RIILINPFTQGMVVI 72

Query: 514 K 516
           +
Sbjct: 73  E 73



 Score = 36.6 bits (83), Expect(2) = 2e-06
 Identities = 19/32 (59%), Positives = 24/32 (75%)
 Frame = +3

Query: 579 PASKASIDALQSVEICEEEAEKGGCAICLVEF 674
           PASKASI+A+  VEI E+  + G CAICL E+
Sbjct: 93  PASKASIEAMPKVEIGEDNKD-GECAICLEEW 123