BLASTX nr result
ID: Atropa21_contig00034657
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00034657
(768 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004235138.1| PREDICTED: uncharacterized protein LOC101243... 126 3e-35
ref|XP_004228785.1| PREDICTED: uncharacterized protein LOC101255... 125 1e-34
dbj|BAD99220.1| polypeptide with an integrase domain [Petunia x ... 118 2e-33
ref|XP_004252107.1| PREDICTED: uncharacterized protein LOC101259... 115 2e-32
ref|XP_004231364.1| PREDICTED: uncharacterized protein LOC101245... 120 6e-32
ref|XP_004239452.1| PREDICTED: uncharacterized protein LOC101259... 119 8e-31
ref|XP_004252168.1| PREDICTED: uncharacterized protein LOC101260... 112 8e-31
ref|XP_004240277.1| PREDICTED: uncharacterized protein LOC101248... 109 5e-30
emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera] 116 2e-27
gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi... 108 7e-26
gb|EOY25713.1| Uncharacterized protein TCM_027093 [Theobroma cacao] 104 1e-25
gb|ABH07899.1| putative polyprotein [Solanum lycopersicum] 99 4e-25
gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hop... 110 4e-25
gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsi... 106 9e-25
emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera] 99 1e-24
emb|CAB10526.1| retrotransposon like protein [Arabidopsis thalia... 118 2e-24
gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsi... 106 6e-24
gb|ACB45081.1| putative polyprotein [Solanum habrochaites] 94 1e-23
emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera] 105 1e-23
emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis th... 100 2e-23
>ref|XP_004235138.1| PREDICTED: uncharacterized protein LOC101243773 [Solanum
lycopersicum]
Length = 957
Score = 126 bits (316), Expect(2) = 3e-35
Identities = 67/131 (51%), Positives = 88/131 (67%), Gaps = 3/131 (2%)
Frame = -2
Query: 620 QNGV--RKTKTPPKISRALLFQSKLPVKY*GECVLTVTYLINKFPS-ILQNVTPYKKLHG 450
QNGV RK K + +R+LLFQSKLP++Y GECVLT TY+IN+ P+ +LQN +PY+ L+
Sbjct: 755 QNGVVERKHKYLLETARSLLFQSKLPLRYWGECVLTATYIINRLPTKLLQNKSPYEILYL 814
Query: 449 SPPPYFHLRIFRCLCFTTLPKFERDKFKHRASLVFFLVILLEKKGYKLLNLYNHSVLYSR 270
P Y HL+ F CLCF T+ K +DKF+ R F+ KGYK+LNL V SR
Sbjct: 815 KQPTYSHLKSFGCLCFPTVLKTHKDKFEPRTIPHIFVGYPFNTKGYKVLNLATKKVHISR 874
Query: 269 DVIFHEHIFPY 237
DV+FHE +FP+
Sbjct: 875 DVVFHERMFPF 885
Score = 49.3 bits (116), Expect(2) = 3e-35
Identities = 24/55 (43%), Positives = 36/55 (65%)
Frame = -1
Query: 765 IKSFTQVVKNQFYSFVKTLRSDNAFEFGSSSQASKFFANSGILHQTTISKWGKEN 601
IK+F +++NQF + +K +RSDN EF +SS+A FF GI+HQ T ++N
Sbjct: 703 IKAFVSLIENQFQTKLKAIRSDNGLEF-TSSEAVHFFQTKGIIHQKTCPYTPQQN 756
>ref|XP_004228785.1| PREDICTED: uncharacterized protein LOC101255821 [Solanum
lycopersicum]
Length = 1125
Score = 125 bits (314), Expect(2) = 1e-34
Identities = 67/131 (51%), Positives = 87/131 (66%), Gaps = 3/131 (2%)
Frame = -2
Query: 620 QNGV--RKTKTPPKISRALLFQSKLPVKY*GECVLTVTYLINKFPS-ILQNVTPYKKLHG 450
QNGV RK K + +RALLFQSKLP++Y GECVLT Y+IN+ P+ +LQN +PY+ L+
Sbjct: 762 QNGVVERKHKYLLETARALLFQSKLPLRYWGECVLTAIYIINRLPTKLLQNKSPYETLYL 821
Query: 449 SPPPYFHLRIFRCLCFTTLPKFERDKFKHRASLVFFLVILLEKKGYKLLNLYNHSVLYSR 270
P Y HL+ F CLCF T+ K +DKF+ R F+ KGYK+LNL V SR
Sbjct: 822 KQPTYSHLKSFGCLCFPTVLKTHKDKFEPRGIPHVFVGYPFNTKGYKVLNLATKKVHISR 881
Query: 269 DVIFHEHIFPY 237
DV+FHE +FP+
Sbjct: 882 DVVFHERMFPF 892
Score = 48.1 bits (113), Expect(2) = 1e-34
Identities = 23/55 (41%), Positives = 36/55 (65%)
Frame = -1
Query: 765 IKSFTQVVKNQFYSFVKTLRSDNAFEFGSSSQASKFFANSGILHQTTISKWGKEN 601
IK+F +++N+F + +K +RSDN EF +SS+A FF GI+HQ T ++N
Sbjct: 710 IKAFVSLIENEFQTKLKAIRSDNGLEF-TSSEAVHFFQTKGIIHQKTCPYTPQQN 763
>dbj|BAD99220.1| polypeptide with an integrase domain [Petunia x hybrida]
Length = 492
Score = 118 bits (295), Expect(2) = 2e-33
Identities = 74/155 (47%), Positives = 91/155 (58%), Gaps = 9/155 (5%)
Frame = -2
Query: 620 QNGV--RKTKTPPKISRALLFQSKLPVKY*GECVLTVTYLINKFPS-ILQNVTPYKKLHG 450
QNGV RK + + RALL+QS LP K+ G+C+LT TYLIN+FPS +L PY+ L G
Sbjct: 171 QNGVVERKHRHLLETCRALLYQSHLPKKFWGDCLLTATYLINRFPSKVLNGKCPYQVLFG 230
Query: 449 SPPPYFHLRIFRCLCFTTLPKFERDKFKHRASLVFFLVILLEKKGYKLLNLYNHSVLYSR 270
S P Y HL+ F LCF + RDK RA FL +KGYK+LNL V+ SR
Sbjct: 231 SLPDYSHLKSFGSLCFVSTLTRHRDKLMPRAIPGVFLGYPFAQKGYKVLNLQTSQVIVSR 290
Query: 269 DVIFHEHIFPYHSFSLPI------IFPIFSEHFED 183
DV F E IFP+ S+SLP+ FP EH D
Sbjct: 291 DVKFFESIFPF-SYSLPMSKLFPASFPTTEEHSPD 324
Score = 51.2 bits (121), Expect(2) = 2e-33
Identities = 24/47 (51%), Positives = 33/47 (70%)
Frame = -1
Query: 765 IKSFTQVVKNQFYSFVKTLRSDNAFEFGSSSQASKFFANSGILHQTT 625
+KS +++ QF S VK +RSDNA+E GS S+F A+ GI+HQTT
Sbjct: 118 LKSLLSLIERQFSSKVKIIRSDNAYELGSGVIPSEFLASLGIIHQTT 164
>ref|XP_004252107.1| PREDICTED: uncharacterized protein LOC101259219 [Solanum
lycopersicum]
Length = 986
Score = 115 bits (287), Expect(2) = 2e-32
Identities = 64/131 (48%), Positives = 83/131 (63%), Gaps = 3/131 (2%)
Frame = -2
Query: 620 QNGV--RKTKTPPKISRALLFQSKLPVKY*GECVLTVTYLINKFPS-ILQNVTPYKKLHG 450
QNGV RK K + +RALLFQSKLP++Y GECVLT TYLIN+ P+ +LQ +PY+ L+
Sbjct: 756 QNGVVERKHKYLLETARALLFQSKLPMRYWGECVLTATYLINRLPTKLLQGKSPYELLYQ 815
Query: 449 SPPPYFHLRIFRCLCFTTLPKFERDKFKHRASLVFFLVILLEKKGYKLLNLYNHSVLYSR 270
P Y HL+ F CLCF T K ++KF+ R F+ KGYK+LNL + R
Sbjct: 816 KKPFYSHLKNFGCLCFPTTLKTHKEKFEPRTVPHIFIGYPFNTKGYKVLNLATKRIHVFR 875
Query: 269 DVIFHEHIFPY 237
DV F+E I P+
Sbjct: 876 DVFFYETILPF 886
Score = 51.2 bits (121), Expect(2) = 2e-32
Identities = 23/55 (41%), Positives = 39/55 (70%)
Frame = -1
Query: 765 IKSFTQVVKNQFYSFVKTLRSDNAFEFGSSSQASKFFANSGILHQTTISKWGKEN 601
IK+F +++NQF++ +KT+RSDN EF S+++A+ FF GI+HQ + ++N
Sbjct: 704 IKAFVSLIENQFHTRLKTIRSDNGLEF-SNNEATSFFQEKGIIHQKSCPYTPQQN 757
>ref|XP_004231364.1| PREDICTED: uncharacterized protein LOC101245809 [Solanum
lycopersicum]
Length = 1094
Score = 120 bits (302), Expect(2) = 6e-32
Identities = 72/154 (46%), Positives = 95/154 (61%), Gaps = 7/154 (4%)
Frame = -2
Query: 620 QNGV--RKTKTPPKISRALLFQSKLPVKY*GECVLTVTYLINKFPS-ILQNVTPYKKLHG 450
QNGV RK K + +RALLFQSKLPVKY GEC+L TY+IN+ PS +L PY+ L+
Sbjct: 686 QNGVVERKHKHLLETARALLFQSKLPVKYWGECILCATYIINRLPSTVLNQKCPYEVLYF 745
Query: 449 SPPPYFHLRIFRCLCFTTLPKFERDKFKHRASLVFFLVILLEKKGYKLLNLYNHSVLYSR 270
P Y H+R F CLC+ T+P R KF+ R + F+ E KGYK+L++ + R
Sbjct: 746 RKPLYSHMRSFGCLCYPTVPIPHRAKFEPRTTPHIFIGYPHETKGYKVLSMSTGKIHVCR 805
Query: 269 DVIFHEHIFPY-HSFSLPIIFP---IFSEHFEDV 180
DVIFHE++FP+ SFS P + S HF D+
Sbjct: 806 DVIFHENVFPFSDSFSNTTGSPFSLLQSPHFIDI 839
Score = 43.9 bits (102), Expect(2) = 6e-32
Identities = 21/55 (38%), Positives = 35/55 (63%)
Frame = -1
Query: 765 IKSFTQVVKNQFYSFVKTLRSDNAFEFGSSSQASKFFANSGILHQTTISKWGKEN 601
+KSF +++NQF VK +R+DN EF +++++ FF GI+HQ T ++N
Sbjct: 634 LKSFITMIENQFEVTVKKIRTDNGLEF-VNTESTNFFKTKGIVHQKTCPYTPQQN 687
>ref|XP_004239452.1| PREDICTED: uncharacterized protein LOC101259633 [Solanum
lycopersicum]
Length = 1105
Score = 119 bits (297), Expect(2) = 8e-31
Identities = 69/135 (51%), Positives = 86/135 (63%), Gaps = 3/135 (2%)
Frame = -2
Query: 620 QNGV--RKTKTPPKISRALLFQSKLPVKY*GECVLTVTYLINKFPS-ILQNVTPYKKLHG 450
QN + RK + + +RALLFQSKLP KY G+C+LT TYLIN+ PS LQN PY+ L+
Sbjct: 751 QNSIVERKHRYLLETARALLFQSKLPTKYWGDCILTSTYLINRIPSTFLQNKCPYEMLYK 810
Query: 449 SPPPYFHLRIFRCLCFTTLPKFERDKFKHRASLVFFLVILLEKKGYKLLNLYNHSVLYSR 270
P Y LR F CLC+ TLPK RDK R + F+ KGYK+++L + SR
Sbjct: 811 EKPKYSQLRSFGCLCYPTLPKVHRDKLP-RTTPHIFIGYPSGIKGYKVMSLATSKIQISR 869
Query: 269 DVIFHEHIFPYHSFS 225
DVIFHE IFP+ SFS
Sbjct: 870 DVIFHEDIFPF-SFS 883
Score = 42.0 bits (97), Expect(2) = 8e-31
Identities = 19/56 (33%), Positives = 36/56 (64%)
Frame = -1
Query: 768 IIKSFTQVVKNQFYSFVKTLRSDNAFEFGSSSQASKFFANSGILHQTTISKWGKEN 601
++++F +++NQF + VK +RSDN EF ++++ +FF GI HQ + ++N
Sbjct: 698 VLQTFINMIENQFQTNVKCIRSDNGLEF-NNNEILRFFQAKGITHQKSCPYTPQQN 752
>ref|XP_004252168.1| PREDICTED: uncharacterized protein LOC101260907 [Solanum
lycopersicum]
Length = 924
Score = 112 bits (281), Expect(2) = 8e-31
Identities = 62/131 (47%), Positives = 83/131 (63%), Gaps = 3/131 (2%)
Frame = -2
Query: 620 QNGV--RKTKTPPKISRALLFQSKLPVKY*GECVLTVTYLINKFPS-ILQNVTPYKKLHG 450
QNG+ RK K + +RALLFQSK+P++Y ECVLT TYLIN+ P+ +LQ +PY+ L+
Sbjct: 591 QNGLVERKHKYLLETARALLFQSKMPMRYWVECVLTATYLINRLPTKLLQGKSPYELLYQ 650
Query: 449 SPPPYFHLRIFRCLCFTTLPKFERDKFKHRASLVFFLVILLEKKGYKLLNLYNHSVLYSR 270
P Y HLR F CLCF T K +DKF+ R F+ KGYK+LN + SR
Sbjct: 651 KKPFYSHLRNFGCLCFPTTLKTHKDKFEPRTMPHIFIGYPFNTKGYKVLNWDTKRIHVSR 710
Query: 269 DVIFHEHIFPY 237
DV+F+E + P+
Sbjct: 711 DVLFYETVLPF 721
Score = 48.1 bits (113), Expect(2) = 8e-31
Identities = 22/45 (48%), Positives = 34/45 (75%)
Frame = -1
Query: 765 IKSFTQVVKNQFYSFVKTLRSDNAFEFGSSSQASKFFANSGILHQ 631
IK+F +++NQF++ +KT+RSDN EF SS++A+ FF I+HQ
Sbjct: 539 IKAFISLIENQFHTRLKTIRSDNGLEF-SSTEATCFFQEKSIIHQ 582
>ref|XP_004240277.1| PREDICTED: uncharacterized protein LOC101248781 [Solanum
lycopersicum]
Length = 729
Score = 109 bits (273), Expect(2) = 5e-30
Identities = 63/131 (48%), Positives = 81/131 (61%), Gaps = 3/131 (2%)
Frame = -2
Query: 620 QNGV--RKTKTPPKISRALLFQSKLPVKY*GECVLTVTYLINKFPS-ILQNVTPYKKLHG 450
QNGV K K + +RALLFQSK+PV+Y GE VLT TYLIN+ P+ +L +PY+ L+
Sbjct: 413 QNGVVEMKHKYLLETARALLFQSKIPVRYWGEYVLTATYLINRLPTKLLPGKSPYELLYQ 472
Query: 449 SPPPYFHLRIFRCLCFTTLPKFERDKFKHRASLVFFLVILLEKKGYKLLNLYNHSVLYSR 270
P Y HL+ F CLCF T K +DKF+ R F+ KGYK+LNL + SR
Sbjct: 473 KKPFYSHLKNFGCLCFPTTLKTHKDKFEPRTVPHIFIGYPFNTKGYKVLNLATKRIHVSR 532
Query: 269 DVIFHEHIFPY 237
DV F+E I P+
Sbjct: 533 DVSFYETILPF 543
Score = 48.5 bits (114), Expect(2) = 5e-30
Identities = 23/55 (41%), Positives = 38/55 (69%)
Frame = -1
Query: 765 IKSFTQVVKNQFYSFVKTLRSDNAFEFGSSSQASKFFANSGILHQTTISKWGKEN 601
IK+F +++NQF + +KT+RSDN EF +S++A+ FF GI+HQ + ++N
Sbjct: 361 IKAFISLIENQFQTRLKTIRSDNGLEF-TSTEATCFFQEKGIIHQKSCPYTPQQN 414
>emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]
Length = 1813
Score = 116 bits (290), Expect(2) = 2e-27
Identities = 66/151 (43%), Positives = 92/151 (60%), Gaps = 12/151 (7%)
Frame = -2
Query: 620 QNGV--RKTKTPPKISRALLFQSKLPVKY*GECVLTVTYLINKFPS-ILQNVTPYKKLHG 450
QNGV RK + ++R+L+FQS +P+++ GECVLT YLIN+ P+ +L N +P++ L+
Sbjct: 922 QNGVVERKHRHILNVARSLMFQSNVPLEFWGECVLTAVYLINRIPTPLLSNKSPFEVLYN 981
Query: 449 SPPPYFHLRIFRCLCFTTLPKFERDKFKHRASLVFFLVILLEKKGYKLLNLYNHSVLYSR 270
PP HLR+F C C+ T + KF RAS+ FL KKGYK+L+L + SR
Sbjct: 982 RPPSLTHLRVFGCECYVT-NVHPKQKFDPRASICVFLGYPHGKKGYKVLDLQTQKISVSR 1040
Query: 269 DVIFHEHIFPYHSF---------SLPIIFPI 204
DV F E+IFP+HS SLP+ PI
Sbjct: 1041 DVFFRENIFPFHSSSSQSQQHSPSLPLPLPI 1071
Score = 33.1 bits (74), Expect(2) = 2e-27
Identities = 19/48 (39%), Positives = 27/48 (56%)
Frame = -1
Query: 768 IIKSFTQVVKNQFYSFVKTLRSDNAFEFGSSSQASKFFANSGILHQTT 625
++ +F Q VK QF++ V+T+R DN EF F N GI QT+
Sbjct: 871 LLTNFVQFVKTQFHTDVQTVRMDNGTEF---IPLRIFLQNKGIELQTS 915
>gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1501
Score = 108 bits (270), Expect(2) = 7e-26
Identities = 59/131 (45%), Positives = 80/131 (61%), Gaps = 3/131 (2%)
Frame = -2
Query: 620 QNG--VRKTKTPPKISRALLFQSKLPVKY*GECVLTVTYLINKFPS-ILQNVTPYKKLHG 450
QNG RK + ++RALLFQ+ LP+K+ GE +LT YLIN+ PS IL TPY+ LHG
Sbjct: 682 QNGRVERKHRHILNVARALLFQASLPIKFWGESILTAAYLINRTPSSILSGRTPYEVLHG 741
Query: 449 SPPPYFHLRIFRCLCFTTLPKFERDKFKHRASLVFFLVILLEKKGYKLLNLYNHSVLYSR 270
S P Y LR+F C+ ++DKF R+ F+ KKG+K+ ++ + L SR
Sbjct: 742 SKPVYSQLRVFGSACYVHRVTRDKDKFGQRSRSCIFVGYPFGKKGWKVYDIERNEFLVSR 801
Query: 269 DVIFHEHIFPY 237
DVIF E +FPY
Sbjct: 802 DVIFREEVFPY 812
Score = 35.8 bits (81), Expect(2) = 7e-26
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = -1
Query: 768 IIKSFTQVVKNQFYSFVKTLRSDNAFEFGSSSQASKFFANSGILHQTT 625
++ +F + + QF VK +RSDN EF S +F +GI+HQT+
Sbjct: 631 VLTNFLKYAEKQFGKTVKMVRSDNGTEFMC---LSSYFRENGIIHQTS 675
>gb|EOY25713.1| Uncharacterized protein TCM_027093 [Theobroma cacao]
Length = 994
Score = 104 bits (259), Expect(2) = 1e-25
Identities = 58/131 (44%), Positives = 79/131 (60%), Gaps = 3/131 (2%)
Frame = -2
Query: 620 QNGV--RKTKTPPKISRALLFQSKLPVKY*GECVLTVTYLINKFPS-ILQNVTPYKKLHG 450
QNG+ RK + ++R LL QS +P+ + G+ VLT ++IN+ PS +L N TPY+ LH
Sbjct: 472 QNGIVERKHQHILVVARGLLHQSNVPIYFWGDAVLTAVHIINRLPSKVLHNKTPYELLHH 531
Query: 449 SPPPYFHLRIFRCLCFTTLPKFERDKFKHRASLVFFLVILLEKKGYKLLNLYNHSVLYSR 270
P Y HLR+F CLCF R K RA+ FL KGYK+ +L ++VL SR
Sbjct: 532 KLPSYDHLRVFGCLCFMFTLTQNRKKLDKRATKCIFLGYPNNMKGYKVYDLSANNVLKSR 591
Query: 269 DVIFHEHIFPY 237
+VIFHE FP+
Sbjct: 592 NVIFHEQTFPF 602
Score = 38.9 bits (89), Expect(2) = 1e-25
Identities = 22/56 (39%), Positives = 33/56 (58%)
Frame = -1
Query: 768 IIKSFTQVVKNQFYSFVKTLRSDNAFEFGSSSQASKFFANSGILHQTTISKWGKEN 601
II SF V+ QF S +K++ +DNA E G FF N+GI+HQ + + ++N
Sbjct: 422 IIPSFNAFVQKQFNSAIKSIGTDNAKELG----LLYFFENTGIVHQLSCVEAHQQN 473
>gb|ABH07899.1| putative polyprotein [Solanum lycopersicum]
Length = 1428
Score = 99.0 bits (245), Expect(2) = 4e-25
Identities = 56/132 (42%), Positives = 81/132 (61%), Gaps = 4/132 (3%)
Frame = -2
Query: 620 QNGV--RKTKTPPKISRALLFQSKLPVKY*GECVLTVTYLINKFPSILQ-NVTPYKKLHG 450
QNGV RK + I+RA+ FQ+ LP+++ G C+ YL+N+ PS N + Y+ L+
Sbjct: 658 QNGVVERKHRHILNIARAIRFQAHLPIRFWGYCIRAAVYLMNRLPSSANSNKSAYELLYC 717
Query: 449 SPPPYFHLRIFRCLCF-TTLPKFERDKFKHRASLVFFLVILLEKKGYKLLNLYNHSVLYS 273
P FHL++ CLC+ TT+PK DKF RAS L +KGY LL++++ V +
Sbjct: 718 KQPSLFHLKVIGCLCYATTVPK--GDKFSARASAAILLGYSELQKGYVLLDIHSTKVHVN 775
Query: 272 RDVIFHEHIFPY 237
RDV+FHE IFP+
Sbjct: 776 RDVVFHEEIFPF 787
Score = 42.7 bits (99), Expect(2) = 4e-25
Identities = 23/55 (41%), Positives = 33/55 (60%)
Frame = -1
Query: 765 IKSFTQVVKNQFYSFVKTLRSDNAFEFGSSSQASKFFANSGILHQTTISKWGKEN 601
IK+F ++ QF S VK +RSDN EF +SQ F + GILHQ++ ++N
Sbjct: 606 IKNFFSMINTQFNSHVKVVRSDNGTEF-LNSQCKDLFNHLGILHQSSCPHTPQQN 659
>gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hopscotch polyprotein
(gb|U12626) [Arabidopsis thaliana]
Length = 1315
Score = 110 bits (275), Expect(2) = 4e-25
Identities = 55/131 (41%), Positives = 83/131 (63%), Gaps = 3/131 (2%)
Frame = -2
Query: 620 QNGV--RKTKTPPKISRALLFQSKLPVKY*GECVLTVTYLINKFPS-ILQNVTPYKKLHG 450
QN V RK + ++R+L FQS +P+ Y G+C+LT YLIN+ P+ IL++ P++ L
Sbjct: 560 QNSVVERKHQHILNVARSLFFQSHIPISYWGDCILTAVYLINRLPAPILEDKCPFEVLTK 619
Query: 449 SPPPYFHLRIFRCLCFTTLPKFERDKFKHRASLVFFLVILLEKKGYKLLNLYNHSVLYSR 270
+ P Y H+++F CLC+ + +R KF RA F+ KGYKLL+L HS++ SR
Sbjct: 620 TVPTYDHIKVFGCLCYASTSPKDRHKFSPRAKACAFIGYPSGFKGYKLLDLETHSIIVSR 679
Query: 269 DVIFHEHIFPY 237
V+FHE +FP+
Sbjct: 680 HVVFHEELFPF 690
Score = 31.2 bits (69), Expect(2) = 4e-25
Identities = 16/44 (36%), Positives = 28/44 (63%)
Frame = -1
Query: 768 IIKSFTQVVKNQFYSFVKTLRSDNAFEFGSSSQASKFFANSGIL 637
+I +F +V+NQF + +K +RSDNA E ++F+ + GI+
Sbjct: 510 VIPTFVTMVENQFETTIKGVRSDNAPEL----NFTQFYHSKGIV 549
>gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1156
Score = 106 bits (265), Expect(2) = 9e-25
Identities = 55/131 (41%), Positives = 81/131 (61%), Gaps = 3/131 (2%)
Frame = -2
Query: 620 QNG--VRKTKTPPKISRALLFQSKLPVKY*GECVLTVTYLINKFPSILQN-VTPYKKLHG 450
QNG RK + ++RA+LFQ+ LP+++ GE VLT YLIN+ P+ L N ++PY+ LH
Sbjct: 243 QNGRVERKHRHILNVARAILFQASLPIQFWGEAVLTAAYLINRTPTSLHNGLSPYEILHN 302
Query: 449 SPPPYFHLRIFRCLCFTTLPKFERDKFKHRASLVFFLVILLEKKGYKLLNLYNHSVLYSR 270
S P Y HLR+F C+ ++DKF R+ L F+ +KG+K+ ++ L SR
Sbjct: 303 SKPNYEHLRVFGSACYVHRASRDKDKFGERSRLCVFIGYPFAQKGWKVFDMEKKEFLVSR 362
Query: 269 DVIFHEHIFPY 237
DV+F E +FPY
Sbjct: 363 DVVFREDVFPY 373
Score = 33.9 bits (76), Expect(2) = 9e-25
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = -1
Query: 768 IIKSFTQVVKNQFYSFVKTLRSDNAFEFGSSSQASKFFANSGILHQTT 625
++ +F + QF VK LRSDN EF + +F GI+HQT+
Sbjct: 192 VLTNFLVYTEKQFGKSVKVLRSDNGTEF---MCLASYFREHGIVHQTS 236
>emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]
Length = 1523
Score = 99.4 bits (246), Expect(2) = 1e-24
Identities = 62/147 (42%), Positives = 81/147 (55%), Gaps = 9/147 (6%)
Frame = -2
Query: 620 QNGV--RKTKTPPKISRALLFQSKLPVKY*GECVLTVTYLINKFPS-ILQNVTPYKKLHG 450
QNGV RK + ++RALLFQS LP + G+ +LT YLIN+ P+ +LQ TP++KL
Sbjct: 682 QNGVVERKHRHLLNVARALLFQSHLPKPFWGDAILTAAYLINRTPTPLLQGKTPFEKLFH 741
Query: 449 SPPPYFHLRIFRCLCFTTLPKFERDKFKHRASLVFFLVILLEKKGYKLLNLYNHSVLYSR 270
P Y HLR+F C CF + KF R+ F+ +KGYK+ +L + L SR
Sbjct: 742 KSPNYSHLRVFGCRCFVSTHPLRPSKFDPRSIESVFIGYPHGQKGYKVYSLKDKKXLISR 801
Query: 269 DVIFHEHIFPYH------SFSLPIIFP 207
DV F E FPY S SL FP
Sbjct: 802 DVTFFETEFPYQNXLSTTSPSLDTFFP 828
Score = 40.8 bits (94), Expect(2) = 1e-24
Identities = 22/56 (39%), Positives = 35/56 (62%)
Frame = -1
Query: 768 IIKSFTQVVKNQFYSFVKTLRSDNAFEFGSSSQASKFFANSGILHQTTISKWGKEN 601
++ F +V NQF S VK +RSDN EF + ++F+++ GILHQT+ ++N
Sbjct: 632 LLVHFVNLVANQFGSQVKIVRSDNGPEF----KHTQFYSSRGILHQTSCINTPQQN 683
>emb|CAB10526.1| retrotransposon like protein [Arabidopsis thaliana]
gi|7268497|emb|CAB78748.1| retrotransposon like protein
[Arabidopsis thaliana]
Length = 1433
Score = 118 bits (295), Expect = 2e-24
Identities = 63/136 (46%), Positives = 89/136 (65%), Gaps = 3/136 (2%)
Frame = -2
Query: 620 QNGV--RKTKTPPKISRALLFQSKLPVKY*GECVLTVTYLINKFPS-ILQNVTPYKKLHG 450
QN V RK + ++RALLFQS +P+++ G+CVLT +LIN+ P+ +L N +PY+KL
Sbjct: 697 QNSVVERKHQHILNVARALLFQSNIPLEFWGDCVLTAVFLINRLPTPVLNNKSPYEKLKN 756
Query: 449 SPPPYFHLRIFRCLCFTTLPKFERDKFKHRASLVFFLVILLEKKGYKLLNLYNHSVLYSR 270
PP Y L+ F CLC+++ +R KF+ RA FL L KGYKLL++ H+V SR
Sbjct: 757 IPPAYESLKTFGCLCYSSTSPKQRHKFEPRARACVFLGYPLGYKGYKLLDIETHAVSISR 816
Query: 269 DVIFHEHIFPYHSFSL 222
VIFHE IFP+ S ++
Sbjct: 817 HVIFHEDIFPFISSTI 832
>gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1454
Score = 106 bits (265), Expect(2) = 6e-24
Identities = 58/130 (44%), Positives = 84/130 (64%), Gaps = 3/130 (2%)
Frame = -2
Query: 620 QNGV--RKTKTPPKISRALLFQSKLPVKY*GECVLTVTYLINKFPS-ILQNVTPYKKLHG 450
QN V RK + ++RAL+FQS++P+ G+CVLT +LIN+ PS +L N TPY+ L G
Sbjct: 711 QNSVVERKHQHILNVARALMFQSQVPLSLWGDCVLTAVFLINRTPSQLLMNKTPYEILTG 770
Query: 449 SPPPYFHLRIFRCLCFTTLPKFERDKFKHRASLVFFLVILLEKKGYKLLNLYNHSVLYSR 270
+ P Y LR F CLC+++ +R KF+ R+ FL KGYKL++L +++V SR
Sbjct: 771 TAPVYEQLRTFGCLCYSSTSPKQRHKFQPRSRACLFLGYPSGYKGYKLMDLESNTVFISR 830
Query: 269 DVIFHEHIFP 240
+V FHE +FP
Sbjct: 831 NVQFHEEVFP 840
Score = 31.2 bits (69), Expect(2) = 6e-24
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = -1
Query: 768 IIKSFTQVVKNQFYSFVKTLRSDNAFEFGSSSQASKFFANSGIL 637
+ +F Q V+NQ+ VK +RSDNA E +S F+A GI+
Sbjct: 661 VFPAFIQQVENQYKVKVKAVRSDNAPELKFTS----FYAEKGIV 700
>gb|ACB45081.1| putative polyprotein [Solanum habrochaites]
Length = 559
Score = 94.4 bits (233), Expect(2) = 1e-23
Identities = 51/133 (38%), Positives = 77/133 (57%), Gaps = 3/133 (2%)
Frame = -2
Query: 620 QNGV--RKTKTPPKISRALLFQSKLPVKY*GECVLTVTYLINKFPS-ILQNVTPYKKLHG 450
QNGV RK + + +RA+ FQ +P+K+ GEC L ++IN+ PS +L N +P++ + G
Sbjct: 73 QNGVVERKHRHIMETARAIRFQGNIPIKFWGECALAAVHIINRIPSTVLLNKSPFEIMFG 132
Query: 449 SPPPYFHLRIFRCLCFTTLPKFERDKFKHRASLVFFLVILLEKKGYKLLNLYNHSVLYSR 270
PP +++I CLC+ T DKF RA + +KGYKL +L N SR
Sbjct: 133 KPPDLSYMKIIGCLCYAT-TLLRSDKFGPRAIKSVLMSYGTTQKGYKLYDLQNKVFFVSR 191
Query: 269 DVIFHEHIFPYHS 231
DV+F+E FP+ +
Sbjct: 192 DVVFNEFTFPFQT 204
Score = 42.7 bits (99), Expect(2) = 1e-23
Identities = 23/56 (41%), Positives = 34/56 (60%)
Frame = -1
Query: 768 IIKSFTQVVKNQFYSFVKTLRSDNAFEFGSSSQASKFFANSGILHQTTISKWGKEN 601
I+K F +VK QF VK RSDN EF ++Q S+ F + GI+HQ++ ++N
Sbjct: 20 ILKQFLAMVKTQFNVQVKVFRSDNGGEF-FNAQVSELFQSQGIIHQSSCPYTPQQN 74
>emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera]
Length = 1461
Score = 105 bits (261), Expect(2) = 1e-23
Identities = 59/135 (43%), Positives = 81/135 (60%), Gaps = 5/135 (3%)
Frame = -2
Query: 620 QNGV--RKTKTPPKISRALLFQSKLPVKY*GECVLTVTYLINKFPS-ILQNVTPYKKLHG 450
QNGV RK + + RAL FQ+ LP+K+ GE + T YLIN+ P+ +L + +PY+ L
Sbjct: 691 QNGVVERKHRHLLNVGRALRFQANLPLKFWGESIQTACYLINRLPTPLLSHKSPYQLLXN 750
Query: 449 SPPPYFHLRIFRCLCFTT--LPKFERDKFKHRASLVFFLVILLEKKGYKLLNLYNHSVLY 276
P Y HLR F CLC+ T LP KF RA F+ L +KGY++ +L +
Sbjct: 751 KLPSYHHLRTFGCLCYATNLLPTH---KFDQRARRCIFVGYPLGQKGYRVYDLXTNKFFS 807
Query: 275 SRDVIFHEHIFPYHS 231
S DV+FHEHIFP+H+
Sbjct: 808 SXDVVFHEHIFPFHT 822
Score = 31.6 bits (70), Expect(2) = 1e-23
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -1
Query: 768 IIKSFTQVVKNQFYSFVKTLRSDNAFEFGSSSQ 670
I++SF V+ QF +KTLR+DN E S Q
Sbjct: 640 ILQSFISWVETQFNRCIKTLRTDNGTEISSMKQ 672
>emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis thaliana]
gi|7269049|emb|CAB79159.1| LTR retrotransposon like
protein [Arabidopsis thaliana]
Length = 1109
Score = 100 bits (248), Expect(2) = 2e-23
Identities = 57/135 (42%), Positives = 79/135 (58%), Gaps = 3/135 (2%)
Frame = -2
Query: 620 QNG--VRKTKTPPKISRALLFQSKLPVKY*GECVLTVTYLINKFPS-ILQNVTPYKKLHG 450
QNG RK + I+RAL FQS LP+++ GEC+L+ YLIN+ PS +LQ +PY+ L+
Sbjct: 445 QNGRVERKHRHILNIARALRFQSYLPIQFWGECILSAAYLINRTPSMLLQGKSPYEMLYK 504
Query: 449 SPPPYFHLRIFRCLCFTTLPKFERDKFKHRASLVFFLVILLEKKGYKLLNLYNHSVLYSR 270
+ P Y HLR+F LC+ + DKF R+ F+ +KG++L +L SR
Sbjct: 505 TAPKYSHLRVFGSLCYAHNQNHKGDKFAARSRRCVFVGYPHGQKGWRLFDLEEQKFFVSR 564
Query: 269 DVIFHEHIFPYHSFS 225
DVIF E FPY S
Sbjct: 565 DVIFQETEFPYSKMS 579
Score = 36.2 bits (82), Expect(2) = 2e-23
Identities = 18/47 (38%), Positives = 29/47 (61%)
Frame = -1
Query: 765 IKSFTQVVKNQFYSFVKTLRSDNAFEFGSSSQASKFFANSGILHQTT 625
+K F +V+ QF + +KT+RSDN EF + +F + GI H+T+
Sbjct: 395 LKDFMALVERQFDTEIKTVRSDNGTEFLCMRE---YFLHKGIAHETS 438