BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00034650
         (499 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006343535.1| PREDICTED: uncharacterized protein LOC102578...   151   8e-35
ref|XP_004966848.1| PREDICTED: uncharacterized protein LOC101777...   121   1e-25
gb|AAM74347.1|AC115686_14 Putative retroelement [Oryza sativa Ja...   117   1e-24
gb|AAT93988.1| putative polyprotein [Oryza sativa Japonica Group]     117   2e-24
gb|EMS54188.1| Putative late blight resistance protein-like prot...   111   9e-23
ref|XP_004986808.1| PREDICTED: uncharacterized protein LOC101773...   110   1e-22
gb|AEJ07955.1| putative polyprotein [Sorghum propinquum]              107   1e-21
gb|AAM08751.1|AC025098_18 Putative copia-type polyprotein [Oryza...   107   2e-21
gb|ABB47941.2| retrotransposon protein, putative, unclassified [...   107   2e-21
gb|AAG13591.2|AC051633_7 putative gag/pol polyprotein [Oryza sat...   107   2e-21
gb|AAU10819.1| putative polyprotein [Oryza sativa Japonica Group...   106   4e-21
gb|ABA93844.2| retrotransposon protein, putative, unclassified [...   104   1e-20
gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp...   103   2e-20
gb|AAK43485.1|AC084807_10 polyprotein, putative [Arabidopsis tha...   102   5e-20
gb|EEC82022.1| hypothetical protein OsI_25984 [Oryza sativa Indi...   100   3e-19
dbj|BAA78423.1| polyprotein [Arabidopsis thaliana]                     99   8e-19
gb|AAK62788.1|AC027036_9 polyprotein, putative [Arabidopsis thal...    99   8e-19
dbj|BAA87949.1| retrotransposon homolog, partial [Arabidopsis th...    99   8e-19
dbj|BAK41512.1| C-end truncated polyprotein [Arabidopsis thaliana]     99   8e-19
dbj|BAK41511.1| polyprotein [Arabidopsis thaliana]                     99   8e-19

>ref|XP_006343535.1| PREDICTED: uncharacterized protein LOC102578284 [Solanum tuberosum]
          Length = 614

 Score =  151 bits (382), Expect = 8e-35
 Identities = 78/142 (54%), Positives = 95/142 (66%)
 Frame = +3

Query: 3   TGMVLMRYESRGELYPITTIVNNNPASPSMFTALTPSLWHARLGHSGASIFSL*KLIRLF 182
           TG  +MR ESRG+LYPIT    N  A PS F AL PSLWH RLGH GA + +  +  +L 
Sbjct: 477 TGRPVMRCESRGKLYPIT----NPRAFPSTFAALAPSLWHDRLGHPGAPVLNSLRKNKLI 532

Query: 183 KCNSTHSTNICHSCLLKKYIKLPFIAFSFSTLSPFDIIHSDLWTSPVLSSLSHRYYVLFL 362
           +CN    + ICHSC L K++KL F A + ST+ PFDIIHSDLWTS VLSS  HRYYVLF+
Sbjct: 533 ECNQIKDSRICHSCPLGKHVKLSFYASNSSTIMPFDIIHSDLWTSLVLSSSGHRYYVLFV 592

Query: 363 DDYSKFL*IFSIDNKFQVYPIF 428
           DD+SKF   F      +++P F
Sbjct: 593 DDHSKFCGHFLYRKNHKLFPHF 614


>ref|XP_004966848.1| PREDICTED: uncharacterized protein LOC101777861 [Setaria italica]
          Length = 2179

 Score =  121 bits (303), Expect = 1e-25
 Identities = 62/166 (37%), Positives = 100/166 (60%), Gaps = 1/166 (0%)
 Frame = +3

Query: 3    TGMVLMRYESRGELYPITTIVNNNPASPSMFTALTPSLWHARLGHSG-ASIFSL*KLIRL 179
            T  V+ R  S G+LYP     ++  A+ +  T+ T SLWH RLGH G A++F L     +
Sbjct: 535  TRSVIARCNSTGDLYPFFPAPSSTTAALTTATSST-SLWHRRLGHLGHAALFQLISS-NV 592

Query: 180  FKCNSTHSTNICHSCLLKKYIKLPFIAFSFSTLSPFDIIHSDLWTSPVLSSLSHRYYVLF 359
              CN  ++ ++CH+C L ++++LPF   +   + PFD+IH DLWTSPV+S   ++YY++ 
Sbjct: 593  ISCNKHNTDHVCHACQLGRHVRLPFSVSNSRAIHPFDLIHCDLWTSPVVSVSGYKYYLVI 652

Query: 360  LDDYSKFL*IFSIDNKFQVYPIFFSFSAFVKI*F*KSIKYFQCDNG 497
            LDD + +   F +  K + + +  +F ++V+  F  +IK  QCDNG
Sbjct: 653  LDDCTHYTWTFPLRLKSETFGVISNFFSYVRTQFDSTIKAVQCDNG 698


>gb|AAM74347.1|AC115686_14 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1250

 Score =  117 bits (294), Expect = 1e-24
 Identities = 71/166 (42%), Positives = 97/166 (58%), Gaps = 2/166 (1%)
 Frame = +3

Query: 3   TGMVLMRYESRGELYPITTIVNNNPA-SPSMFTALTPSLWHARLGH-SGASIFSL*KLIR 176
           T  V++R  SRG+LY +       PA +   F A + +LWH RLGH S A+I +L KL  
Sbjct: 455 TRRVILRCNSRGDLYTLPIAA---PAIAAHSFLAQSSTLWHRRLGHPSSAAIQTLHKLAI 511

Query: 177 LFKCNSTHSTNICHSCLLKKYIKLPFIAFSFSTLSPFDIIHSDLWTSPVLSSLSHRYYVL 356
           L      HS  +CH+C L K+ +LPF     ST SPF+++H D+WTSPVLS+   +YY++
Sbjct: 512 LPCTKIDHS--LCHACKLGKHTRLPFSRSQSSTSSPFELVHCDVWTSPVLSTSGFKYYLV 569

Query: 357 FLDDYSKFL*IFSIDNKFQVYPIFFSFSAFVKI*F*KSIKYFQCDN 494
            LDD+S F   F + +K  V+     F A+V   F  SIK FQ DN
Sbjct: 570 VLDDFSHFCWTFPLRHKSDVHQHIVEFVAYVTTQFGSSIKCFQADN 615


>gb|AAT93988.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1480

 Score =  117 bits (293), Expect = 2e-24
 Identities = 72/168 (42%), Positives = 101/168 (60%), Gaps = 3/168 (1%)
 Frame = +3

Query: 3   TGMVLMRYESRGELYPITTIVNNNPA-SPSMFTALTPSLWHARLGH-SGASIFSL*KLIR 176
           T  V++R  SRG+LY + T V   PA +   F A + +LWH RLGH S A++ +L KL  
Sbjct: 454 TRRVILRCNSRGDLYTLPTTV---PAITAHSFLAKSSTLWHHRLGHPSPAAVQTLHKLAI 510

Query: 177 LFKCNSTHSTN-ICHSCLLKKYIKLPFIAFSFSTLSPFDIIHSDLWTSPVLSSLSHRYYV 353
           L   + T S N +CH+C L K+ +L F   S ST SPF+++H D+WTSPVLS    +YY+
Sbjct: 511 L---SCTRSNNKLCHACHLGKHTRLSFSKSSSSTSSPFELVHCDVWTSPVLSLSGFKYYL 567

Query: 354 LFLDDYSKFL*IFSIDNKFQVYPIFFSFSAFVKI*F*KSIKYFQCDNG 497
           + LDD++ F   F + +K  V+     F A+VK  F   I+ FQ DNG
Sbjct: 568 VVLDDFTHFCWTFPLRHKSDVHQHLLEFVAYVKTQFSLPIRCFQADNG 615


>gb|EMS54188.1| Putative late blight resistance protein-like protein R1B-14 [Triticum
            urartu]
          Length = 770

 Score =  111 bits (278), Expect = 9e-23
 Identities = 61/168 (36%), Positives = 93/168 (55%), Gaps = 3/168 (1%)
 Frame = +3

Query: 3    TGMVLMRYESRGELYPITTIVNNNPASPSMFTALTPSLWHARLGHSGASIFSL*KLIRLF 182
            T M + R+ S G+LY     V+N  +S S     +  LWH RLGH  +   +   L+R F
Sbjct: 524  TKMEIARFNSSGDLYT----VDNASSSSSHAMLASVGLWHRRLGHPHSGTTTT--LLREF 577

Query: 183  KC---NSTHSTNICHSCLLKKYIKLPFIAFSFSTLSPFDIIHSDLWTSPVLSSLSHRYYV 353
            +      +H  ++CH+C + K++ LPF   S  +  PF+++H DLWTSP  S    +YY+
Sbjct: 578  QLPYDRDSHDPSLCHACQMGKHVHLPFGTSSTRSSFPFELLHCDLWTSPTPSVFGFKYYL 637

Query: 354  LFLDDYSKFL*IFSIDNKFQVYPIFFSFSAFVKI*F*KSIKYFQCDNG 497
            + L+DYS F+  F I  K  V+ +F +F  +V   F   I++ QCDNG
Sbjct: 638  VLLNDYSHFICTFPIRAKSDVHALFVNFQRYVFTHFSLPIRFLQCDNG 685


>ref|XP_004986808.1| PREDICTED: uncharacterized protein LOC101773259 [Setaria italica]
          Length = 1950

 Score =  110 bits (276), Expect = 1e-22
 Identities = 60/165 (36%), Positives = 89/165 (53%), Gaps = 1/165 (0%)
 Frame = +3

Query: 3    TGMVLMRYESRGELYPITTIVNNNPASPS-MFTALTPSLWHARLGHSGASIFSL*KLIRL 179
            TG V++R  S G+LY   T+    P +PS  F A + +LWH RLGH   +       I +
Sbjct: 1092 TGRVILRCNSDGDLY---TMPAGTPVAPSHAFLAASSTLWHQRLGHPAPAALERLNKIHV 1148

Query: 180  FKCNSTHSTNICHSCLLKKYIKLPFIAFSFSTLSPFDIIHSDLWTSPVLSSLSHRYYVLF 359
              CN     ++CHSC L K+ +LPF +    T +PF+++H D+WTSP+ S     YY++ 
Sbjct: 1149 VSCNKV-DRSLCHSCQLGKHTRLPFSSSHSITHAPFELVHCDVWTSPINSLSGFSYYLVC 1207

Query: 360  LDDYSKFL*IFSIDNKFQVYPIFFSFSAFVKI*F*KSIKYFQCDN 494
            LDDYS +  +F +  K +V+      +A  K  F   +K  Q DN
Sbjct: 1208 LDDYSHYCWVFPLGKKSEVHQHIVELAALAKTQFSLPLKCVQADN 1252


>gb|AEJ07955.1| putative polyprotein [Sorghum propinquum]
          Length = 826

 Score =  107 bits (268), Expect = 1e-21
 Identities = 60/166 (36%), Positives = 85/166 (51%), Gaps = 1/166 (0%)
 Frame = +3

Query: 3    TGMVLMRYESRGELYPITTIVNNNPA-SPSMFTALTPSLWHARLGHSGASIFSL*KLIRL 179
            T  V+ R  S G+LYP        PA S +   A   SLWH RLGH G    S       
Sbjct: 561  TRNVIARCNSSGDLYPFFP-----PATSATALLAAPASLWHRRLGHLGREALSQLVSSSA 615

Query: 180  FKCNSTHSTNICHSCLLKKYIKLPFIAFSFSTLSPFDIIHSDLWTSPVLSSLSHRYYVLF 359
              CN     ++CH+C L ++ +LPF   +    + FD+IH DLW SP++S   ++YY++ 
Sbjct: 616  ISCNKDDDYHLCHACQLGRHTRLPFSTSTSRATNNFDLIHCDLWASPIVSVSGYKYYLII 675

Query: 360  LDDYSKFL*IFSIDNKFQVYPIFFSFSAFVKI*F*KSIKYFQCDNG 497
            LDD S ++  F +  K   +    +F A V+  F  +IK  QCDNG
Sbjct: 676  LDDRSHYIWTFPLRLKSDTFSTVANFFAHVRTQFGTTIKSVQCDNG 721


>gb|AAM08751.1|AC025098_18 Putative copia-type polyprotein [Oryza sativa Japonica Group]
          Length = 1803

 Score =  107 bits (266), Expect = 2e-21
 Identities = 60/169 (35%), Positives = 101/169 (59%), Gaps = 4/169 (2%)
 Frame = +3

Query: 3   TGMVLMRYESRGELYPITTIVNNNPASPSMFTALTPSL--WHARLGHSGASIFSL*KLIR 176
           T +V +R +S G+LYP+       P+  ++    +PS+  WH RLGH G++  SL K++ 
Sbjct: 465 TQVVKLRCDSPGDLYPLRL-----PSPHALSATSSPSVEHWHLRLGHPGSA--SLSKVLG 517

Query: 177 LF--KCNSTHSTNICHSCLLKKYIKLPFIAFSFSTLSPFDIIHSDLWTSPVLSSLSHRYY 350
            F  +CN + + + C +C +   ++LPF + S  TL PF ++H+D+WTSP+ S+  ++YY
Sbjct: 518 SFDFQCNKS-APHHCSACHVGTNVRLPFHSSSSQTLFPFQLVHTDVWTSPIYSNSGYKYY 576

Query: 351 VLFLDDYSKFL*IFSIDNKFQVYPIFFSFSAFVKI*F*KSIKYFQCDNG 497
           V+FLDD++ ++  F + NK +V+    SF A+    F   +   Q DNG
Sbjct: 577 VVFLDDFTHYIWTFPVRNKSEVFHTVRSFFAYAHTQFGLPVLALQTDNG 625


>gb|ABB47941.2| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1414

 Score =  107 bits (266), Expect = 2e-21
 Identities = 60/169 (35%), Positives = 101/169 (59%), Gaps = 4/169 (2%)
 Frame = +3

Query: 3   TGMVLMRYESRGELYPITTIVNNNPASPSMFTALTPSL--WHARLGHSGASIFSL*KLIR 176
           T +V +R +S G+LYP+       P+  ++    +PS+  WH RLGH G++  SL K++ 
Sbjct: 465 TQVVKLRCDSPGDLYPLRL-----PSPHALSATSSPSVEHWHLRLGHPGSA--SLSKVLG 517

Query: 177 LF--KCNSTHSTNICHSCLLKKYIKLPFIAFSFSTLSPFDIIHSDLWTSPVLSSLSHRYY 350
            F  +CN + + + C +C +   ++LPF + S  TL PF ++H+D+WTSP+ S+  ++YY
Sbjct: 518 SFDFQCNKS-APHHCSACHVGTNVRLPFHSSSSQTLFPFQLVHTDVWTSPIYSNSGYKYY 576

Query: 351 VLFLDDYSKFL*IFSIDNKFQVYPIFFSFSAFVKI*F*KSIKYFQCDNG 497
           V+FLDD++ ++  F + NK +V+    SF A+    F   +   Q DNG
Sbjct: 577 VVFLDDFTHYIWTFPVRNKSEVFHTVRSFFAYAHTQFGLPVLALQTDNG 625


>gb|AAG13591.2|AC051633_7 putative gag/pol polyprotein [Oryza sativa Japonica Group]
          Length = 1417

 Score =  107 bits (266), Expect = 2e-21
 Identities = 60/169 (35%), Positives = 101/169 (59%), Gaps = 4/169 (2%)
 Frame = +3

Query: 3   TGMVLMRYESRGELYPITTIVNNNPASPSMFTALTPSL--WHARLGHSGASIFSL*KLIR 176
           T +V +R +S G+LYP+       P+  ++    +PS+  WH RLGH G++  SL K++ 
Sbjct: 465 TQVVKLRCDSPGDLYPLRL-----PSPHALSATSSPSVEHWHLRLGHPGSA--SLSKVLG 517

Query: 177 LF--KCNSTHSTNICHSCLLKKYIKLPFIAFSFSTLSPFDIIHSDLWTSPVLSSLSHRYY 350
            F  +CN + + + C +C +   ++LPF + S  TL PF ++H+D+WTSP+ S+  ++YY
Sbjct: 518 SFDFQCNKS-APHHCSACHVGTNVRLPFHSSSSQTLFPFQLVHTDVWTSPIYSNSGYKYY 576

Query: 351 VLFLDDYSKFL*IFSIDNKFQVYPIFFSFSAFVKI*F*KSIKYFQCDNG 497
           V+FLDD++ ++  F + NK +V+    SF A+    F   +   Q DNG
Sbjct: 577 VVFLDDFTHYIWTFPVRNKSEVFHTVRSFFAYAHTQFGLPVLALQTDNG 625


>gb|AAU10819.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|53981353|gb|AAV24907.1| hypothetical protein [Oryza
            sativa Japonica Group]
          Length = 1679

 Score =  106 bits (264), Expect = 4e-21
 Identities = 57/166 (34%), Positives = 91/166 (54%), Gaps = 1/166 (0%)
 Frame = +3

Query: 3    TGMVLMRYESRGELYPITTIVNNNPASPSMFT-ALTPSLWHARLGHSGASIFSL*KLIRL 179
            T  V+ R+ S G LY +   +   PA+ ++   + T  LWH RLGH G    +L +L  +
Sbjct: 659  TRTVIARFNSSGPLYSLHHALPPPPAATALLANSSTDLLWHRRLGHLGHD--ALNRLAAV 716

Query: 180  FKCNSTHSTNICHSCLLKKYIKLPFIAFSFSTLSPFDIIHSDLWTSPVLSSLSHRYYVLF 359
                    T +CH+C L ++++LPF + +    + F++ H DLWTSPV+S+   +YY++ 
Sbjct: 717  VPMTRGDLTGVCHACQLGRHVRLPFASSTSRASTNFELFHCDLWTSPVVSASGFKYYLVI 776

Query: 360  LDDYSKFL*IFSIDNKFQVYPIFFSFSAFVKI*F*KSIKYFQCDNG 497
            LDD S ++  F +  K   +     F A+VK  F  +I+  QCDNG
Sbjct: 777  LDDCSHYVWTFPLRFKSDTFTTLSHFFAYVKTQFATNIRSIQCDNG 822


>gb|ABA93844.2| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1099

 Score =  104 bits (259), Expect = 1e-20
 Identities = 60/167 (35%), Positives = 89/167 (53%), Gaps = 6/167 (3%)
 Frame = +3

Query: 15  LMRYESRGELYPITTIVNNNPASPSMFTAL--TPSLWHARLGHSGASIFSL*KLIRLFKC 188
           ++R  S G+LYP      ++ AS   FTA   T  LWH RLGH G        L RL + 
Sbjct: 462 IVRCNSSGDLYPFPADAFSSAASARTFTATESTTDLWHRRLGHIGHDA-----LTRLSQA 516

Query: 189 N----STHSTNICHSCLLKKYIKLPFIAFSFSTLSPFDIIHSDLWTSPVLSSLSHRYYVL 356
           +       +  +CH+  L ++++LPF +      + F+++H DLWTSPV S    +YY++
Sbjct: 517 SVIPLPRGAAPVCHAYQLGRHVRLPFTSSFTRASAKFELVHCDLWTSPVPSVYGFKYYLV 576

Query: 357 FLDDYSKFL*IFSIDNKFQVYPIFFSFSAFVKI*F*KSIKYFQCDNG 497
            LDDYS ++  F +  K + +     F AFVK  F  +I+  QCDNG
Sbjct: 577 ILDDYSHYVWTFPLRLKSETFDTISHFFAFVKTQFSTTIRNIQCDNG 623


>gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1296

 Score =  103 bits (258), Expect = 2e-20
 Identities = 57/162 (35%), Positives = 87/162 (53%), Gaps = 2/162 (1%)
 Frame = +3

Query: 15  LMRYESRGELYPITTIVNNNPASPSMFTALTPS--LWHARLGHSGASIFSL*KLIRLFKC 188
           L+R +S G LY +T   ++ P+S     A T    +WH RLGH  +++ S          
Sbjct: 463 LLRCDSSGPLYSVTP--SSYPSSHHALAATTSDSFIWHRRLGHPSSTLLSHLLSSLSISV 520

Query: 189 NSTHSTNICHSCLLKKYIKLPFIAFSFSTLSPFDIIHSDLWTSPVLSSLSHRYYVLFLDD 368
             T  T++C +C L K+ +LPF   +    S F+I+HSD+WTSPV S    +YY++FLD 
Sbjct: 521 PKTDLTSLCQACQLGKHTRLPFFNSNTIASSLFEIVHSDIWTSPVPSISGLKYYLIFLDQ 580

Query: 369 YSKFL*IFSIDNKFQVYPIFFSFSAFVKI*F*KSIKYFQCDN 494
           YS F+  + +  K      + +FS +V+  F +  K  QCDN
Sbjct: 581 YSHFVWAYPLHRKSDTLVKYINFSTYVQTQFNRQFKSLQCDN 622


>gb|AAK43485.1|AC084807_10 polyprotein, putative [Arabidopsis thaliana]
           gi|225898008|dbj|BAH30336.1| hypothetical protein
           [Arabidopsis thaliana]
          Length = 1459

 Score =  102 bits (254), Expect = 5e-20
 Identities = 60/173 (34%), Positives = 99/173 (57%), Gaps = 8/173 (4%)
 Frame = +3

Query: 3   TGMVLMRYESRGELY--PITTIVNNNPASPSMFTALTP----SLWHARLGHSGASIFS-- 158
           TG +L++  ++ +LY  P+T     NP + ++FT+ +P    S WH+RLGH  ASI +  
Sbjct: 434 TGTLLLQGRTKDDLYEWPVT-----NPPATALFTSPSPKTTLSSWHSRLGHPSASILNTL 488

Query: 159 L*KLIRLFKCNSTHSTNICHSCLLKKYIKLPFIAFSFSTLSPFDIIHSDLWTSPVLSSLS 338
           L K        S++ T+ C  CL+ K  KLPF   S  + SP + I +D+WTSP++S  +
Sbjct: 489 LSKFSLPVSVASSNKTS-CSDCLINKSHKLPFATSSIHSSSPLEYIFTDVWTSPIISHDN 547

Query: 339 HRYYVLFLDDYSKFL*IFSIDNKFQVYPIFFSFSAFVKI*F*KSIKYFQCDNG 497
           ++YY++ +D Y+++  ++ +  K QV   F +F A V+  F   I+    DNG
Sbjct: 548 YKYYLVLVDHYTRYTWLYPLQQKSQVKATFIAFKALVENRFQAKIRTLYSDNG 600


>gb|EEC82022.1| hypothetical protein OsI_25984 [Oryza sativa Indica Group]
          Length = 964

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 53/128 (41%), Positives = 73/128 (57%)
 Frame = +3

Query: 114  LWHARLGHSGASIFSL*KLIRLFKCNSTHSTNICHSCLLKKYIKLPFIAFSFSTLSPFDI 293
            LWH RLGH G+   +L +L R          ++CH+C L ++ +LPF        S FD+
Sbjct: 697  LWHHRLGHLGSE--ALTRLARSSVIPPYRELSVCHACQLGRHCRLPFNTSFTRATSNFDL 754

Query: 294  IHSDLWTSPVLSSLSHRYYVLFLDDYSKFL*IFSIDNKFQVYPIFFSFSAFVKI*F*KSI 473
            IH DLWTSPV S   ++YY++ LDD S F+  F +  K   +    +F A+VK  F K+I
Sbjct: 755  IHCDLWTSPVSSVSGYKYYLVILDDCSHFVWTFPLRLKSDTFRTLTNFFAYVKTQFSKTI 814

Query: 474  KYFQCDNG 497
            K  QCDNG
Sbjct: 815  KSIQCDNG 822


>dbj|BAA78423.1| polyprotein [Arabidopsis thaliana]
          Length = 1431

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 60/170 (35%), Positives = 95/170 (55%), Gaps = 5/170 (2%)
 Frame = +3

Query: 3   TGMVLMRYESRGELYPITTIVNNNP----ASPSMFTALTPSLWHARLGHSGASIF-SL*K 167
           TG+ L++ +++ ELY    I ++ P    ASPS  +  T S WHARLGH   SI  S+  
Sbjct: 393 TGVPLLQGKTKDELYE-WPIASSQPVSLFASPS--SKATHSSWHARLGHPAPSILNSVIS 449

Query: 168 LIRLFKCNSTHSTNICHSCLLKKYIKLPFIAFSFSTLSPFDIIHSDLWTSPVLSSLSHRY 347
              L   N +H    C  CL+ K  K+PF   + ++  P + I+SD+W+SP+LS  ++RY
Sbjct: 450 NYSLSVLNPSHKFLSCSDCLINKSNKVPFSQSTINSTRPLEYIYSDVWSSPILSHDNYRY 509

Query: 348 YVLFLDDYSKFL*IFSIDNKFQVYPIFFSFSAFVKI*F*KSIKYFQCDNG 497
           YV+F+D ++++  ++ +  K QV   F +F   ++  F   I  F  DNG
Sbjct: 510 YVIFVDHFTRYTWLYPLKQKSQVKETFITFKNLLENRFQTRIGTFYSDNG 559


>gb|AAK62788.1|AC027036_9 polyprotein, putative [Arabidopsis thaliana]
           gi|18265373|dbj|BAB84015.1| polyprotein [Arabidopsis
           thaliana]
          Length = 1466

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 60/170 (35%), Positives = 95/170 (55%), Gaps = 5/170 (2%)
 Frame = +3

Query: 3   TGMVLMRYESRGELYPITTIVNNNP----ASPSMFTALTPSLWHARLGHSGASIF-SL*K 167
           TG+ L++ +++ ELY    I ++ P    ASPS  +  T S WHARLGH   SI  S+  
Sbjct: 428 TGVPLLQGKTKDELYE-WPIASSQPVSLFASPS--SKATHSSWHARLGHPAPSILNSVIS 484

Query: 168 LIRLFKCNSTHSTNICHSCLLKKYIKLPFIAFSFSTLSPFDIIHSDLWTSPVLSSLSHRY 347
              L   N +H    C  CL+ K  K+PF   + ++  P + I+SD+W+SP+LS  ++RY
Sbjct: 485 NYSLSVLNPSHKFLSCSDCLINKSNKVPFSQSTINSTRPLEYIYSDVWSSPILSHDNYRY 544

Query: 348 YVLFLDDYSKFL*IFSIDNKFQVYPIFFSFSAFVKI*F*KSIKYFQCDNG 497
           YV+F+D ++++  ++ +  K QV   F +F   ++  F   I  F  DNG
Sbjct: 545 YVIFVDHFTRYTWLYPLKQKSQVKETFITFKNLLENRFQTRIGTFYSDNG 594


>dbj|BAA87949.1| retrotransposon homolog, partial [Arabidopsis thaliana]
          Length = 847

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 60/170 (35%), Positives = 95/170 (55%), Gaps = 5/170 (2%)
 Frame = +3

Query: 3   TGMVLMRYESRGELYPITTIVNNNP----ASPSMFTALTPSLWHARLGHSGASIF-SL*K 167
           TG+ L++ +++ ELY    I ++ P    ASPS  +  T S WHARLGH   SI  S+  
Sbjct: 393 TGVPLLQGKTKDELYE-WPIASSQPVSLFASPS--SKATHSSWHARLGHPAPSILNSVIS 449

Query: 168 LIRLFKCNSTHSTNICHSCLLKKYIKLPFIAFSFSTLSPFDIIHSDLWTSPVLSSLSHRY 347
              L   N +H    C  CL+ K  K+PF   + ++  P + I+SD+W+SP+LS  ++RY
Sbjct: 450 NYSLSVLNPSHKFLSCSDCLINKSNKVPFSQSTINSTRPLEYIYSDVWSSPILSHDNYRY 509

Query: 348 YVLFLDDYSKFL*IFSIDNKFQVYPIFFSFSAFVKI*F*KSIKYFQCDNG 497
           YV+F+D ++++  ++ +  K QV   F +F   ++  F   I  F  DNG
Sbjct: 510 YVIFVDHFTRYTWLYPLKQKSQVKETFITFKNLLENRFQTRIGTFYSDNG 559


>dbj|BAK41512.1| C-end truncated polyprotein [Arabidopsis thaliana]
          Length = 1048

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 60/170 (35%), Positives = 95/170 (55%), Gaps = 5/170 (2%)
 Frame = +3

Query: 3   TGMVLMRYESRGELYPITTIVNNNP----ASPSMFTALTPSLWHARLGHSGASIF-SL*K 167
           TG+ L++ +++ ELY    I ++ P    ASPS  +  T S WHARLGH   SI  S+  
Sbjct: 423 TGVPLLQGKTKDELYE-WPIASSQPVSLFASPS--SKATHSSWHARLGHPAPSILNSVIS 479

Query: 168 LIRLFKCNSTHSTNICHSCLLKKYIKLPFIAFSFSTLSPFDIIHSDLWTSPVLSSLSHRY 347
              L   N +H    C  CL+ K  K+PF   + ++  P + I+SD+W+SP+LS  ++RY
Sbjct: 480 NYSLSVLNPSHKFLSCSDCLINKSNKVPFSQSTINSTRPLEYIYSDVWSSPILSHDNYRY 539

Query: 348 YVLFLDDYSKFL*IFSIDNKFQVYPIFFSFSAFVKI*F*KSIKYFQCDNG 497
           YV+F+D ++++  ++ +  K QV   F +F   ++  F   I  F  DNG
Sbjct: 540 YVIFVDHFTRYTWLYPLKQKSQVKETFITFKNLLENRFQTRIGTFYSDNG 589


>dbj|BAK41511.1| polyprotein [Arabidopsis thaliana]
          Length = 1466

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 60/170 (35%), Positives = 95/170 (55%), Gaps = 5/170 (2%)
 Frame = +3

Query: 3   TGMVLMRYESRGELYPITTIVNNNP----ASPSMFTALTPSLWHARLGHSGASIF-SL*K 167
           TG+ L++ +++ ELY    I ++ P    ASPS  +  T S WHARLGH   SI  S+  
Sbjct: 428 TGVPLLQGKTKDELYE-WPIASSQPVSLFASPS--SKATHSSWHARLGHPAPSILNSVIS 484

Query: 168 LIRLFKCNSTHSTNICHSCLLKKYIKLPFIAFSFSTLSPFDIIHSDLWTSPVLSSLSHRY 347
              L   N +H    C  CL+ K  K+PF   + ++  P + I+SD+W+SP+LS  ++RY
Sbjct: 485 NYSLSVLNPSHKFLSCSDCLINKSNKVPFSQSTINSTRPLEYIYSDVWSSPILSHDNYRY 544

Query: 348 YVLFLDDYSKFL*IFSIDNKFQVYPIFFSFSAFVKI*F*KSIKYFQCDNG 497
           YV+F+D ++++  ++ +  K QV   F +F   ++  F   I  F  DNG
Sbjct: 545 YVIFVDHFTRYTWLYPLKQKSQVKETFITFKNLLENRFQTRIGTFYSDNG 594