BLASTX nr result

ID: Atropa21_contig00034592 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00034592
         (680 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006346013.1| PREDICTED: dof zinc finger protein DOF3.6-li...   145   9e-33
emb|CAN79495.1| hypothetical protein VITISV_020749 [Vitis vinifera]    57   4e-06
ref|XP_002278642.1| PREDICTED: dof zinc finger protein DOF3.6 [V...    56   9e-06

>ref|XP_006346013.1| PREDICTED: dof zinc finger protein DOF3.6-like [Solanum tuberosum]
          Length = 302

 Score =  145 bits (367), Expect = 9e-33
 Identities = 90/148 (60%), Positives = 98/148 (66%), Gaps = 3/148 (2%)
 Frame = +3

Query: 42  TTTTIPSHLPQ-TTHLSFLSTPSHNFNNDFISTQNSLNFGEIQPHEGDESNNQMNFSARF 218
           TTTT PSH P  +THLSFL+TP HNFN+ F STQN LNFGEIQPHEGD         A F
Sbjct: 170 TTTTFPSHFPPPSTHLSFLNTPFHNFNH-FNSTQNGLNFGEIQPHEGD---------ATF 219

Query: 219 VDQFRLQQMQQFSFFSPLEQQPSNLYPIYSESGIT--DVENVKVEEXXXXXXXXXXXXXX 392
           VDQFR QQMQQFSFFSPLE QPSNLYPIYSE GI+  D+ENVKVEE              
Sbjct: 220 VDQFRHQQMQQFSFFSPLE-QPSNLYPIYSEFGISHHDLENVKVEENKSSTSTQGMNLQR 278

Query: 393 XXXXXTSNQLWTDISGYNTTTTSTSQPL 476
                  NQ WT+   YN ++TSTSQ L
Sbjct: 279 NNNLGV-NQFWTN---YNISSTSTSQLL 302


>emb|CAN79495.1| hypothetical protein VITISV_020749 [Vitis vinifera]
          Length = 338

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 56/193 (29%), Positives = 77/193 (39%), Gaps = 40/193 (20%)
 Frame = +3

Query: 3   NSTTTTIPSYLPQTTTTIPSHLPQTT---HLSFLSTPSHNFNNDFISTQNSLNFGEIQP- 170
           +S+ + +PS     T+ +  HLP       LSFL  P  +   D+ +    LNFG IQP 
Sbjct: 148 SSSASAVPSN--SCTSDMIGHLPPPPPPPQLSFL--PXLHHLADYGAGDIGLNFGGIQPP 203

Query: 171 ---HEGDESNNQMNF-------------SARFVDQFRLQQMQQFSFFSPLEQQPSNLYPI 302
                G  S   + F             S    +Q+RLQQ+QQF F + LE  PS LY  
Sbjct: 204 VAVSGGGNSGTDIEFPIGSCSGGGGPILSGGLAEQWRLQQVQQFPFLAGLE-PPSGLYSF 262

Query: 303 YSE--------------------SGITDVENVKVEEXXXXXXXXXXXXXXXXXXXTSNQL 422
             E                    SG+T +  VK+EE                    S   
Sbjct: 263 EGEGTEPPSYLGGSGHLRAKALDSGVTQMTAVKIEENQGLNLSRNFLGLPGNDQYWSGNT 322

Query: 423 WTDISGYNTTTTS 461
           W D+SG+N++TTS
Sbjct: 323 WNDLSGFNSSTTS 335


>ref|XP_002278642.1| PREDICTED: dof zinc finger protein DOF3.6 [Vitis vinifera]
          Length = 338

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 56/193 (29%), Positives = 77/193 (39%), Gaps = 40/193 (20%)
 Frame = +3

Query: 3   NSTTTTIPSYLPQTTTTIPSHLPQTT---HLSFLSTPSHNFNNDFISTQNSLNFGEIQP- 170
           +S+ + +PS     T+ +  HLP       LSFL  P H+   D+ +    LNFG IQP 
Sbjct: 148 SSSASAVPSN--SCTSDMIGHLPPPPPPPQLSFLP-PLHHLA-DYGAGDIGLNFGGIQPP 203

Query: 171 ---HEGDESNNQMNF-------------SARFVDQFRLQQMQQFSFFSPLEQQPSNLYPI 302
                G  S   + F             S    + +RLQQ+QQF F + LE  PS LY  
Sbjct: 204 VAVSGGGNSGTDIEFPIGSCSGGGGPILSGGLAEHWRLQQVQQFPFLAGLEP-PSGLYSF 262

Query: 303 YSE--------------------SGITDVENVKVEEXXXXXXXXXXXXXXXXXXXTSNQL 422
             E                    SG+T +  VK+EE                    S   
Sbjct: 263 EGEGTEPPSYLGGSGHLRAKALDSGVTQMTAVKIEENQGLNLSRNFLGLPGNDQYWSGNT 322

Query: 423 WTDISGYNTTTTS 461
           W D+SG+N++TTS
Sbjct: 323 WNDLSGFNSSTTS 335


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