BLASTX nr result
ID: Atropa21_contig00034579
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00034579
(508 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein A... 82 2e-19
ref|XP_006354689.1| PREDICTED: uncharacterized protein LOC102605... 67 1e-15
ref|XP_006338209.1| PREDICTED: putative ribonuclease H protein A... 66 1e-15
ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein A... 56 8e-15
ref|XP_006343440.1| PREDICTED: uncharacterized protein LOC102595... 57 3e-13
ref|XP_006355175.1| PREDICTED: putative ribonuclease H protein A... 49 1e-10
ref|XP_006338863.1| PREDICTED: uncharacterized protein LOC102579... 53 9e-08
ref|XP_006358721.1| PREDICTED: uncharacterized protein LOC102596... 40 2e-06
ref|XP_004233852.1| PREDICTED: uncharacterized protein LOC101253... 40 9e-06
>ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 885
Score = 81.6 bits (200), Expect(3) = 2e-19
Identities = 46/127 (36%), Positives = 77/127 (60%), Gaps = 1/127 (0%)
Frame = +1
Query: 112 SRGNGACYNTEAEAYAIVKAMRYCSTRNLDQILVQTDSQFIQKIFGEGCKPP*NITYWVD 291
++G G N EAE AI+ A+R CS R + +++++TDS ++KI + + P I V+
Sbjct: 741 AKGIGIATNMEAETVAILTALRECSNRKMQKVIIETDSLSLKKIIQQTWRVPWKIAEKVE 800
Query: 292 ENRDLVRDKQIVFTHTLREGNKLAGALANHVIDNGNVFCHP-FRDLSKECRKIVDSDKSQ 468
E R+++ + TH REGN LA +LAN I++ + F++L + R+I++ DK+Q
Sbjct: 801 EIREIMEKIKAKITHIFREGNSLADSLANIAIESQAEHQYSCFQELPLKERRILNIDKAQ 860
Query: 469 VPYLIIR 489
+P L IR
Sbjct: 861 IPTLRIR 867
Score = 37.0 bits (84), Expect(3) = 2e-19
Identities = 14/32 (43%), Positives = 24/32 (75%)
Frame = +2
Query: 41 KG*SWVGAYGFCTRDESGDIVYAQAEEMGHAT 136
+G + ++GFC RD+ GD++YA+A+ +G AT
Sbjct: 717 RGNPGLSSFGFCIRDDKGDLIYAKAKGIGIAT 748
Score = 22.7 bits (47), Expect(3) = 2e-19
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3
Query: 24 NTDGASRVNPG 56
NTDGA R NPG
Sbjct: 711 NTDGACRGNPG 721
>ref|XP_006354689.1| PREDICTED: uncharacterized protein LOC102605437 [Solanum tuberosum]
Length = 333
Score = 67.0 bits (162), Expect(3) = 1e-15
Identities = 40/119 (33%), Positives = 65/119 (54%), Gaps = 1/119 (0%)
Frame = +1
Query: 136 NTEAEAYAIVKAMRYCSTRNLDQILVQTDSQFIQKIFGEGCKPP*NITYWVDENRDLVRD 315
N E EA AI + + +C T+ + + ++TDSQ + KI + P +I +++ L ++
Sbjct: 208 NLEVEAVAIREDLAHCVTKGVMKACLETDSQVLIKILTRIWEVPWSIVVIIEDIWGLFQE 267
Query: 316 KQIVFTHTLREGNKLAGALANHVIDNGNVFCH-PFRDLSKECRKIVDSDKSQVPYLIIR 489
+ H REGN LA LAN N N+ + F +L + +KIV+ DK Q+P + IR
Sbjct: 268 CHVQIQHVYREGNTLADYLANLAFFNPNIIVYNSFAELPSQAKKIVNLDKQQLPNIKIR 326
Score = 33.5 bits (75), Expect(3) = 1e-15
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +2
Query: 56 VGAYGFCTRDESGDIVYAQAEEMGHAT 136
+ +YGFC R+ GD+VY Q +E+ T
Sbjct: 181 ISSYGFCLRNSVGDLVYVQGKEIQEGT 207
Score = 27.7 bits (60), Expect(3) = 1e-15
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +3
Query: 3 PTGWLICNTDGASRVNP 53
P G L CNTD ASR NP
Sbjct: 163 PEGILTCNTDVASRCNP 179
>ref|XP_006338209.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 198
Score = 66.2 bits (160), Expect(3) = 1e-15
Identities = 43/126 (34%), Positives = 67/126 (53%), Gaps = 1/126 (0%)
Frame = +1
Query: 124 GACYNTEAEAYAIVKAMRYCSTRNLDQILVQTDSQFIQKIFGEGCKPP*NITYWVDENRD 303
G N EAE AI++A+RYC + + +I++++DS + KI E K I DE +
Sbjct: 64 GITTNVEAEMRAILEAIRYCVNKKMRKIILESDSLLMVKIINEAWKVLWVIAEEFDELKQ 123
Query: 304 LVRDKQIVFTHTLREGNKLAGALANHVIDN-GNVFCHPFRDLSKECRKIVDSDKSQVPYL 480
+ ++ H REGNKLA LAN I++ F+ L RKI++ +K+Q+P L
Sbjct: 124 EMTKIEVKTQHIYREGNKLADYLANLAINSTEKKTFSSFQQLPSLGRKIINMEKAQIPSL 183
Query: 481 IIRVHK 498
R +
Sbjct: 184 RCRTKR 189
Score = 34.7 bits (78), Expect(3) = 1e-15
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +2
Query: 41 KG*SWVGAYGFCTRDESGDIVYAQAEEMGHAT 136
KG + AYG+C R+ +GD+++ AE +G T
Sbjct: 36 KGNPGISAYGYCLRNSNGDLIHVTAENIGITT 67
Score = 26.9 bits (58), Expect(3) = 1e-15
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +3
Query: 21 CNTDGASRVNPG 56
CNTDGAS+ NPG
Sbjct: 29 CNTDGASKGNPG 40
>ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 1035
Score = 56.2 bits (134), Expect(3) = 8e-15
Identities = 35/117 (29%), Positives = 61/117 (52%), Gaps = 2/117 (1%)
Frame = +1
Query: 124 GACYNTEAEAYAIVKAMRYCSTRNLDQILVQTDSQFIQKIFGEGCKPP*NITYWVDENRD 303
G N EAEA + KA+++C L ++ ++TDS +Q + K P + ++E +
Sbjct: 716 GETTNMEAEATTVWKALQFCYENGLRKVRLETDSLALQNMITRSWKIPWELVEKLEEIHE 775
Query: 304 LVRDKQIVFTHTLREGNKLAGALANHVI--DNGNVFCHPFRDLSKECRKIVDSDKSQ 468
+++ + H RE N+LA +AN I ++ VF H F L +K+++ DK Q
Sbjct: 776 IMQQIDVQVCHVYREVNQLADFIANTTINTEHKKVF-HHFHQLPSLGKKLLNIDKHQ 831
Score = 37.7 bits (86), Expect(3) = 8e-15
Identities = 14/32 (43%), Positives = 23/32 (71%)
Frame = +2
Query: 41 KG*SWVGAYGFCTRDESGDIVYAQAEEMGHAT 136
KG + +YG+C RD++GD++YA+A +G T
Sbjct: 688 KGNPRMSSYGYCIRDKNGDLLYAEAHNIGETT 719
Score = 31.2 bits (69), Expect(3) = 8e-15
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +3
Query: 9 GWLICNTDGASRVNP 53
GW+ CNTDGAS+ NP
Sbjct: 677 GWVTCNTDGASKGNP 691
>ref|XP_006343440.1| PREDICTED: uncharacterized protein LOC102595406 [Solanum tuberosum]
Length = 866
Score = 57.4 bits (137), Expect(3) = 3e-13
Identities = 30/82 (36%), Positives = 47/82 (57%)
Frame = +1
Query: 136 NTEAEAYAIVKAMRYCSTRNLDQILVQTDSQFIQKIFGEGCKPP*NITYWVDENRDLVRD 315
N EAEA AI +A+ +C+TR ++ ++TDS ++ I + P NI V++ L++
Sbjct: 783 NVEAEAVAIKEAIYHCTTRGFSRVTIETDSLLLKNILQGNWEIPWNIRIIVEDTLTLMQY 842
Query: 316 KQIVFTHTLREGNKLAGALANH 381
+ H REGN LA LAN+
Sbjct: 843 STVNIEHIYREGNTLADYLANY 864
Score = 35.4 bits (80), Expect(3) = 3e-13
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +2
Query: 41 KG*SWVGAYGFCTRDESGDIVYAQAEEMGHAT 136
KG +Y +C RD+ G+++YAQAEE+ T
Sbjct: 751 KGNPGKSSYAYCLRDQEGNLIYAQAEEIPETT 782
Score = 26.9 bits (58), Expect(3) = 3e-13
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +3
Query: 21 CNTDGASRVNPG 56
CNTDGAS+ NPG
Sbjct: 744 CNTDGASKGNPG 755
>ref|XP_006355175.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 143
Score = 48.5 bits (114), Expect(3) = 1e-10
Identities = 24/80 (30%), Positives = 43/80 (53%)
Frame = +1
Query: 124 GACYNTEAEAYAIVKAMRYCSTRNLDQILVQTDSQFIQKIFGEGCKPP*NITYWVDENRD 303
G N +AE+ AI KA++YC ++ Q+ ++TDS ++ I K P + V++ +
Sbjct: 64 GVTTNMDAESMAIWKALQYCLSQGFQQVSLETDSLTLKNILVRNWKTPWELVERVEDILE 123
Query: 304 LVRDKQIVFTHTLREGNKLA 363
++ + H RE N+LA
Sbjct: 124 IMSHMDVTIKHIFREVNQLA 143
Score = 31.6 bits (70), Expect(3) = 1e-10
Identities = 10/25 (40%), Positives = 19/25 (76%)
Frame = +2
Query: 62 AYGFCTRDESGDIVYAQAEEMGHAT 136
+YGFC R+ +G+++YA+ + +G T
Sbjct: 43 SYGFCIRNHTGELLYAEVQSIGVTT 67
Score = 30.8 bits (68), Expect(3) = 1e-10
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +3
Query: 9 GWLICNTDGASRVNP 53
GW+ CNTDGAS+ NP
Sbjct: 25 GWIKCNTDGASKGNP 39
>ref|XP_006338863.1| PREDICTED: uncharacterized protein LOC102579795 [Solanum tuberosum]
Length = 778
Score = 53.1 bits (126), Expect(2) = 9e-08
Identities = 26/81 (32%), Positives = 46/81 (56%)
Frame = +1
Query: 142 EAEAYAIVKAMRYCSTRNLDQILVQTDSQFIQKIFGEGCKPP*NITYWVDENRDLVRDKQ 321
EAE A + +++C + NL ++++TDS + KI + P +I+ + + + L RD Q
Sbjct: 182 EAEVIAFERGLQFCMSHNLLPVILETDSLIVSKILDGIWETPWSISLLIKKIQWLRRDGQ 241
Query: 322 IVFTHTLREGNKLAGALANHV 384
+ +H REGNK+ AN +
Sbjct: 242 VEVSHVFREGNKVVNYFANFI 262
Score = 28.5 bits (62), Expect(2) = 9e-08
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 41 KG*SWVGAYGFCTRDESGDIVYAQAEEMGHAT 136
KG A GFC R+ +G+ +Y ++E+G T
Sbjct: 148 KGNPRPSAGGFCIRNWNGEFIYTTSQELGFKT 179
>ref|XP_006358721.1| PREDICTED: uncharacterized protein LOC102596481 [Solanum tuberosum]
Length = 1135
Score = 40.0 bits (92), Expect(3) = 2e-06
Identities = 18/52 (34%), Positives = 33/52 (63%)
Frame = +1
Query: 112 SRGNGACYNTEAEAYAIVKAMRYCSTRNLDQILVQTDSQFIQKIFGEGCKPP 267
++G G N EAEA A+++A+ YC ++L + +++TDS ++K+ K P
Sbjct: 1077 AKGIGIATNMEAEALALLEAVWYCQEKDLKEPIIETDSLVLKKMVDNQWKIP 1128
Score = 32.0 bits (71), Expect(3) = 2e-06
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +2
Query: 41 KG*SWVGAYGFCTRDESGDIVYAQAEEMGHAT 136
+G S + F RDE GD++YA+A+ +G AT
Sbjct: 1053 RGNSGASSTSFVVRDEEGDLIYARAKGIGIAT 1084
Score = 23.9 bits (50), Expect(3) = 2e-06
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +3
Query: 21 CNTDGASRVNPG 56
CNTDGA+R N G
Sbjct: 1046 CNTDGAARGNSG 1057
>ref|XP_004233852.1| PREDICTED: uncharacterized protein LOC101253557 [Solanum
lycopersicum]
Length = 13995
Score = 40.0 bits (92), Expect(2) = 9e-06
Identities = 17/48 (35%), Positives = 30/48 (62%)
Frame = +1
Query: 118 GNGACYNTEAEAYAIVKAMRYCSTRNLDQILVQTDSQFIQKIFGEGCK 261
G AC NT+AEA AI++A+++ +D+++++TDS I + K
Sbjct: 3212 GELACTNTQAEAMAILQALKFIEATQMDRVVIKTDSLLTNNIVDKSWK 3259
Score = 34.7 bits (78), Expect(2) = 9e-06
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = +2
Query: 50 SWVGAYGFCTRDESGDIVYAQAEEMG 127
SWV FC RDE GDI+ AQA+E+G
Sbjct: 3191 SWV----FCVRDEQGDILQAQAQEIG 3212