BLASTX nr result

ID: Atropa21_contig00034578 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00034578
         (586 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004243965.1| PREDICTED: putative cyclin-B3-1-like [Solanu...   280   3e-73
ref|XP_006346021.1| PREDICTED: cyclin-A2-4-like isoform X2 [Sola...   261   7e-68
ref|XP_006346020.1| PREDICTED: cyclin-A2-4-like isoform X1 [Sola...   261   7e-68

>ref|XP_004243965.1| PREDICTED: putative cyclin-B3-1-like [Solanum lycopersicum]
          Length = 730

 Score =  280 bits (715), Expect = 3e-73
 Identities = 148/194 (76%), Positives = 157/194 (80%)
 Frame = -3

Query: 584 TKASFDGPKTKIQGRKSVTIGIRPTGRNALPPSRRSLPILHQVNVEGTNNKEKGNLRPNL 405
           TKASF+GPKTKIQGRKSVTIGIR T RNALPPSRRSL  L QVNV+ TN KEKGNLR NL
Sbjct: 153 TKASFEGPKTKIQGRKSVTIGIRSTRRNALPPSRRSLLTLQQVNVDDTNYKEKGNLRRNL 212

Query: 404 NGATDDKQILTHAPFKDTKAPFDGPKTKTQGRKSVTIGIRTIGRSALLPSRRSLPVLEQV 225
           +GAT D+QILT APFK  KAPFDGPKTKTQG KS TIGIRT GR+AL PSRRSLPVLEQV
Sbjct: 213 SGATGDRQILTQAPFKAVKAPFDGPKTKTQGSKSATIGIRTTGRNALPPSRRSLPVLEQV 272

Query: 224 NVKGTHXXXXXXXXXXXXXXGISGVPVSAMPKAAGDILPQLSNHHNIRRNRVSDASARMA 45
           N KGTH              GI+GVPV A  KAAGD+LPQLSNH+NIRRNRVSDASARMA
Sbjct: 273 NTKGTHNKAKENPKELEKGKGINGVPVLAKLKAAGDVLPQLSNHNNIRRNRVSDASARMA 332

Query: 44  PKGQAKVEIGALRR 3
           PKG  K EIGALR+
Sbjct: 333 PKGHTKAEIGALRK 346



 Score =  106 bits (264), Expect = 5e-21
 Identities = 55/83 (66%), Positives = 65/83 (78%), Gaps = 4/83 (4%)
 Frame = -3

Query: 443 TNNKEK----GNLRPNLNGATDDKQILTHAPFKDTKAPFDGPKTKTQGRKSVTIGIRTIG 276
           TNN  +    GN+R N+NGAT D++ILT APFKDTKA F+GPKTK QGRKSVTIGIR+  
Sbjct: 119 TNNSSRNFIMGNVRTNMNGATGDEEILTRAPFKDTKASFEGPKTKIQGRKSVTIGIRSTR 178

Query: 275 RSALLPSRRSLPVLEQVNVKGTH 207
           R+AL PSRRSL  L+QVNV  T+
Sbjct: 179 RNALPPSRRSLLTLQQVNVDDTN 201


>ref|XP_006346021.1| PREDICTED: cyclin-A2-4-like isoform X2 [Solanum tuberosum]
          Length = 679

 Score =  261 bits (668), Expect = 7e-68
 Identities = 142/194 (73%), Positives = 152/194 (78%)
 Frame = -3

Query: 584 TKASFDGPKTKIQGRKSVTIGIRPTGRNALPPSRRSLPILHQVNVEGTNNKEKGNLRPNL 405
           TK SF+GPKTKIQGRKSVTIGIR           RSLPIL QVNV+ TNNKEKGNLR +L
Sbjct: 153 TKTSFEGPKTKIQGRKSVTIGIR-----------RSLPILQQVNVDDTNNKEKGNLRRHL 201

Query: 404 NGATDDKQILTHAPFKDTKAPFDGPKTKTQGRKSVTIGIRTIGRSALLPSRRSLPVLEQV 225
           +G T DKQILT APFK  KAP DGPKTKTQGRKSVTIGIRT GR+AL PSRRSLPVLEQV
Sbjct: 202 SGVTGDKQILTQAPFKAMKAPCDGPKTKTQGRKSVTIGIRTTGRNALPPSRRSLPVLEQV 261

Query: 224 NVKGTHXXXXXXXXXXXXXXGISGVPVSAMPKAAGDILPQLSNHHNIRRNRVSDASARMA 45
           N KGTH              GI+GVPVSA  KAAG++LPQLSNH+NIRRNRVSDASARMA
Sbjct: 262 NTKGTHNKAKENSKELEKGKGINGVPVSAKLKAAGNVLPQLSNHNNIRRNRVSDASARMA 321

Query: 44  PKGQAKVEIGALRR 3
           PKG AK EIGALR+
Sbjct: 322 PKGHAKAEIGALRK 335



 Score = 89.4 bits (220), Expect = 6e-16
 Identities = 47/73 (64%), Positives = 53/73 (72%)
 Frame = -3

Query: 425 GNLRPNLNGATDDKQILTHAPFKDTKAPFDGPKTKTQGRKSVTIGIRTIGRSALLPSRRS 246
           GN+R NLNGAT D+ ILT APFKDTK  F+GPKTK QGRKSVTIGI           RRS
Sbjct: 129 GNVRTNLNGATGDEGILTRAPFKDTKTSFEGPKTKIQGRKSVTIGI-----------RRS 177

Query: 245 LPVLEQVNVKGTH 207
           LP+L+QVNV  T+
Sbjct: 178 LPILQQVNVDDTN 190


>ref|XP_006346020.1| PREDICTED: cyclin-A2-4-like isoform X1 [Solanum tuberosum]
          Length = 719

 Score =  261 bits (668), Expect = 7e-68
 Identities = 142/194 (73%), Positives = 152/194 (78%)
 Frame = -3

Query: 584 TKASFDGPKTKIQGRKSVTIGIRPTGRNALPPSRRSLPILHQVNVEGTNNKEKGNLRPNL 405
           TK SF+GPKTKIQGRKSVTIGIR           RSLPIL QVNV+ TNNKEKGNLR +L
Sbjct: 153 TKTSFEGPKTKIQGRKSVTIGIR-----------RSLPILQQVNVDDTNNKEKGNLRRHL 201

Query: 404 NGATDDKQILTHAPFKDTKAPFDGPKTKTQGRKSVTIGIRTIGRSALLPSRRSLPVLEQV 225
           +G T DKQILT APFK  KAP DGPKTKTQGRKSVTIGIRT GR+AL PSRRSLPVLEQV
Sbjct: 202 SGVTGDKQILTQAPFKAMKAPCDGPKTKTQGRKSVTIGIRTTGRNALPPSRRSLPVLEQV 261

Query: 224 NVKGTHXXXXXXXXXXXXXXGISGVPVSAMPKAAGDILPQLSNHHNIRRNRVSDASARMA 45
           N KGTH              GI+GVPVSA  KAAG++LPQLSNH+NIRRNRVSDASARMA
Sbjct: 262 NTKGTHNKAKENSKELEKGKGINGVPVSAKLKAAGNVLPQLSNHNNIRRNRVSDASARMA 321

Query: 44  PKGQAKVEIGALRR 3
           PKG AK EIGALR+
Sbjct: 322 PKGHAKAEIGALRK 335



 Score = 89.4 bits (220), Expect = 6e-16
 Identities = 47/73 (64%), Positives = 53/73 (72%)
 Frame = -3

Query: 425 GNLRPNLNGATDDKQILTHAPFKDTKAPFDGPKTKTQGRKSVTIGIRTIGRSALLPSRRS 246
           GN+R NLNGAT D+ ILT APFKDTK  F+GPKTK QGRKSVTIGI           RRS
Sbjct: 129 GNVRTNLNGATGDEGILTRAPFKDTKTSFEGPKTKIQGRKSVTIGI-----------RRS 177

Query: 245 LPVLEQVNVKGTH 207
           LP+L+QVNV  T+
Sbjct: 178 LPILQQVNVDDTN 190


Top