BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00034464
         (758 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006343727.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   110   7e-22
ref|XP_004242994.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   110   7e-22
sp|P69242.1|RPOT3_NICSY RecName: Full=DNA-directed RNA polymeras...   106   7e-21
sp|Q8L6J1.2|RPO3B_TOBAC RecName: Full=DNA-directed RNA polymeras...   105   2e-20
emb|CAC95026.1| plastid RNA polymerase [Nicotiana tabacum]            105   2e-20
ref|XP_002528405.1| DNA-directed RNA polymerase 3B, chloroplast ...   101   3e-19
emb|CBI36559.3| unnamed protein product [Vitis vinifera]               99   2e-18
ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, ch...    99   2e-18
ref|XP_004287148.1| PREDICTED: DNA-directed RNA polymerase 3, ch...    97   8e-18
ref|XP_002325119.1| DNA-directed RNA polymerase family protein [...    96   1e-17
gb|EOY31497.1| DNA/RNA polymerases superfamily protein isoform 2...    96   2e-17
gb|EOY31496.1| DNA/RNA polymerases superfamily protein isoform 1...    96   2e-17
gb|EMJ04424.1| hypothetical protein PRUPE_ppa000868mg [Prunus pe...    96   2e-17
gb|EXB42921.1| DNA-directed RNA polymerase 3 [Morus notabilis]         95   3e-17
ref|XP_002308414.1| hypothetical protein POPTR_0006s19490g [Popu...    95   3e-17
gb|EPS64933.1| hypothetical protein M569_09836 [Genlisea aurea]        93   1e-16
ref|XP_006296121.1| hypothetical protein CARUB_v10025273mg [Caps...    93   1e-16
ref|NP_973525.2| DNA-directed RNA polymerase 3 [Arabidopsis thal...    93   1e-16
ref|NP_179989.1| DNA-directed RNA polymerase 3 [Arabidopsis thal...    93   1e-16
ref|XP_002880548.1| PDE319/SCA3 [Arabidopsis lyrata subsp. lyrat...    93   1e-16

>ref|XP_006343727.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
           [Solanum tuberosum]
          Length = 1015

 Score =  110 bits (274), Expect = 7e-22
 Identities = 59/77 (76%), Positives = 64/77 (83%)
 Frame = -3

Query: 756 GEQPADDVYTEMARRVHHIIRGDSTKDPATDPNDLLAKLLTGQVDRKLVK*TVIISVYGV 577
           GE+PAD VYTE+A RV HIIRGDSTKDPATDPN LLAKLL  QVDRKLVK TV+ SVYGV
Sbjct: 743 GEKPAD-VYTEIALRVDHIIRGDSTKDPATDPNALLAKLLIDQVDRKLVKQTVMTSVYGV 801

Query: 576 NYVWPPEQIQKRLENKG 526
            YV   EQI++RLE KG
Sbjct: 802 TYVGAREQIKRRLEEKG 818


>ref|XP_004242994.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
           [Solanum lycopersicum]
          Length = 1007

 Score =  110 bits (274), Expect = 7e-22
 Identities = 59/77 (76%), Positives = 64/77 (83%)
 Frame = -3

Query: 756 GEQPADDVYTEMARRVHHIIRGDSTKDPATDPNDLLAKLLTGQVDRKLVK*TVIISVYGV 577
           GE+PAD VYTE+A RV HIIRGDSTKDPATDPN LLAKLL  QVDRKLVK TV+ SVYGV
Sbjct: 735 GEKPAD-VYTEIALRVDHIIRGDSTKDPATDPNALLAKLLIDQVDRKLVKQTVMTSVYGV 793

Query: 576 NYVWPPEQIQKRLENKG 526
            YV   EQI++RLE KG
Sbjct: 794 TYVGAREQIKRRLEEKG 810


>sp|P69242.1|RPOT3_NICSY RecName: Full=DNA-directed RNA polymerase 3, chloroplastic;
           AltName: Full=NsRpoT-C; AltName: Full=T7
           bacteriophage-type single subunit RNA polymerase 3;
           Flags: Precursor gi|59800203|sp|P69243.1|RPO3A_TOBAC
           RecName: Full=DNA-directed RNA polymerase 3A,
           chloroplastic; AltName: Full=NictaRpoT3-syl; AltName:
           Full=T7 bacteriophage-type single subunit RNA polymerase
           3A; Flags: Precursor gi|21425641|emb|CAC82576.3|
           phage-type RNA polymerase [Nicotiana sylvestris]
           gi|21425679|emb|CAC95027.2| plastid RNA polymerase
           [Nicotiana tabacum] gi|24475541|dbj|BAC22693.1| T7
           bacteriophage-type single subunit RNA polymerase
           [Nicotiana sylvestris] gi|24475543|dbj|BAC22694.1| T7
           bacteriophage-type single subunit RNA polymerase
           [Nicotiana sylvestris]
          Length = 977

 Score =  106 bits (265), Expect = 7e-21
 Identities = 57/77 (74%), Positives = 63/77 (81%)
 Frame = -3

Query: 756 GEQPADDVYTEMARRVHHIIRGDSTKDPATDPNDLLAKLLTGQVDRKLVK*TVIISVYGV 577
           G++PAD VYTE+A RV HIIRGDS KDPATDPN LLAKLL  QVDRKLVK TV+ SVYGV
Sbjct: 705 GDKPAD-VYTEIALRVDHIIRGDSIKDPATDPNALLAKLLIDQVDRKLVKQTVMTSVYGV 763

Query: 576 NYVWPPEQIQKRLENKG 526
            YV   EQI++RLE KG
Sbjct: 764 TYVGAREQIKRRLEEKG 780


>sp|Q8L6J1.2|RPO3B_TOBAC RecName: Full=DNA-directed RNA polymerase 3B, chloroplastic;
           AltName: Full=NictaRpoT3-tom; AltName: Full=T7
           bacteriophage-type single subunit RNA polymerase 3B;
           Flags: Precursor gi|21425667|emb|CAC95021.2| chloroplast
           RNA polymerase [Nicotiana tabacum]
          Length = 977

 Score =  105 bits (262), Expect = 2e-20
 Identities = 57/77 (74%), Positives = 62/77 (80%)
 Frame = -3

Query: 756 GEQPADDVYTEMARRVHHIIRGDSTKDPATDPNDLLAKLLTGQVDRKLVK*TVIISVYGV 577
           GE+PAD VYTE+A RV HIIRGDS KDPA DPN LLAKLL  QVDRKLVK TV+ SVYGV
Sbjct: 705 GEKPAD-VYTEIALRVDHIIRGDSIKDPAIDPNALLAKLLIDQVDRKLVKQTVMTSVYGV 763

Query: 576 NYVWPPEQIQKRLENKG 526
            YV   EQI++RLE KG
Sbjct: 764 TYVGAREQIKRRLEEKG 780


>emb|CAC95026.1| plastid RNA polymerase [Nicotiana tabacum]
          Length = 557

 Score =  105 bits (262), Expect = 2e-20
 Identities = 57/77 (74%), Positives = 62/77 (80%)
 Frame = -3

Query: 756 GEQPADDVYTEMARRVHHIIRGDSTKDPATDPNDLLAKLLTGQVDRKLVK*TVIISVYGV 577
           GE+PAD VYTE+A RV HIIRGDS KDPA DPN LLAKLL  QVDRKLVK TV+ SVYGV
Sbjct: 288 GEKPAD-VYTEIALRVDHIIRGDSIKDPAIDPNALLAKLLIDQVDRKLVKQTVMTSVYGV 346

Query: 576 NYVWPPEQIQKRLENKG 526
            YV   EQI++RLE KG
Sbjct: 347 TYVGAREQIKRRLEEKG 363


>ref|XP_002528405.1| DNA-directed RNA polymerase 3B, chloroplast precursor, putative
           [Ricinus communis] gi|223532193|gb|EEF33998.1|
           DNA-directed RNA polymerase 3B, chloroplast precursor,
           putative [Ricinus communis]
          Length = 1000

 Score =  101 bits (251), Expect = 3e-19
 Identities = 54/77 (70%), Positives = 61/77 (79%)
 Frame = -3

Query: 756 GEQPADDVYTEMARRVHHIIRGDSTKDPATDPNDLLAKLLTGQVDRKLVK*TVIISVYGV 577
           GE+PAD VYTE+A RVH +I  DS KDPAT+PN LLAKLL  QVDRKLVK TV+ SVYGV
Sbjct: 696 GEKPAD-VYTEIAARVHELIERDSNKDPATNPNALLAKLLIDQVDRKLVKQTVMTSVYGV 754

Query: 576 NYVWPPEQIQKRLENKG 526
            YV   EQI++RLE KG
Sbjct: 755 TYVGAREQIKRRLEEKG 771


>emb|CBI36559.3| unnamed protein product [Vitis vinifera]
          Length = 808

 Score = 98.6 bits (244), Expect = 2e-18
 Identities = 51/77 (66%), Positives = 61/77 (79%)
 Frame = -3

Query: 756 GEQPADDVYTEMARRVHHIIRGDSTKDPATDPNDLLAKLLTGQVDRKLVK*TVIISVYGV 577
           GE+PAD VY+E+A RVH I++ DS KDPATDP  LLAK+L GQVDRKLVK TV+ SVYGV
Sbjct: 536 GEKPAD-VYSEIAARVHEIMKRDSNKDPATDPKALLAKVLIGQVDRKLVKQTVMTSVYGV 594

Query: 576 NYVWPPEQIQKRLENKG 526
            Y+   EQI++RL  KG
Sbjct: 595 TYIGAREQIKRRLAEKG 611


>ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Vitis
           vinifera]
          Length = 979

 Score = 98.6 bits (244), Expect = 2e-18
 Identities = 51/77 (66%), Positives = 61/77 (79%)
 Frame = -3

Query: 756 GEQPADDVYTEMARRVHHIIRGDSTKDPATDPNDLLAKLLTGQVDRKLVK*TVIISVYGV 577
           GE+PAD VY+E+A RVH I++ DS KDPATDP  LLAK+L GQVDRKLVK TV+ SVYGV
Sbjct: 707 GEKPAD-VYSEIAARVHEIMKRDSNKDPATDPKALLAKVLIGQVDRKLVKQTVMTSVYGV 765

Query: 576 NYVWPPEQIQKRLENKG 526
            Y+   EQI++RL  KG
Sbjct: 766 TYIGAREQIKRRLAEKG 782


>ref|XP_004287148.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
           [Fragaria vesca subsp. vesca]
          Length = 973

 Score = 96.7 bits (239), Expect = 8e-18
 Identities = 50/77 (64%), Positives = 61/77 (79%)
 Frame = -3

Query: 756 GEQPADDVYTEMARRVHHIIRGDSTKDPATDPNDLLAKLLTGQVDRKLVK*TVIISVYGV 577
           GE+PAD VY+E+A RVH I++ DS KDP T+PN LLAK+L  Q+DRKLVK TV+ SVYGV
Sbjct: 701 GEKPAD-VYSEIAVRVHDIMKRDSNKDPTTNPNALLAKVLVNQIDRKLVKQTVMTSVYGV 759

Query: 576 NYVWPPEQIQKRLENKG 526
            YV   EQI++RLE KG
Sbjct: 760 TYVGAREQIKRRLEEKG 776


>ref|XP_002325119.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
           gi|222866553|gb|EEF03684.1| DNA-directed RNA polymerase
           family protein [Populus trichocarpa]
          Length = 882

 Score = 95.9 bits (237), Expect = 1e-17
 Identities = 51/76 (67%), Positives = 61/76 (80%)
 Frame = -3

Query: 753 EQPADDVYTEMARRVHHIIRGDSTKDPATDPNDLLAKLLTGQVDRKLVK*TVIISVYGVN 574
           E+P+D VY+E+A RVH IIR DS KDPAT+P+ LLAK+L  QVDRKLVK TV+ SVYGV 
Sbjct: 611 EKPSD-VYSEIAVRVHEIIRRDSNKDPATNPHALLAKILVDQVDRKLVKQTVMTSVYGVT 669

Query: 573 YVWPPEQIQKRLENKG 526
           YV   EQI++RLE KG
Sbjct: 670 YVGAREQIKRRLEEKG 685


>gb|EOY31497.1| DNA/RNA polymerases superfamily protein isoform 2 [Theobroma cacao]
          Length = 857

 Score = 95.5 bits (236), Expect = 2e-17
 Identities = 51/77 (66%), Positives = 62/77 (80%)
 Frame = -3

Query: 756 GEQPADDVYTEMARRVHHIIRGDSTKDPATDPNDLLAKLLTGQVDRKLVK*TVIISVYGV 577
           GE+PAD VY+E+A RVH+I++ DS KDPAT+PN  LAKLL  QVDRKLVK TV+ SVYGV
Sbjct: 584 GEKPAD-VYSEIAVRVHNIMKRDSDKDPATNPNASLAKLLIDQVDRKLVKQTVMTSVYGV 642

Query: 576 NYVWPPEQIQKRLENKG 526
            +V   EQI++RLE KG
Sbjct: 643 TFVGAREQIKRRLEEKG 659


>gb|EOY31496.1| DNA/RNA polymerases superfamily protein isoform 1 [Theobroma cacao]
          Length = 978

 Score = 95.5 bits (236), Expect = 2e-17
 Identities = 51/77 (66%), Positives = 62/77 (80%)
 Frame = -3

Query: 756 GEQPADDVYTEMARRVHHIIRGDSTKDPATDPNDLLAKLLTGQVDRKLVK*TVIISVYGV 577
           GE+PAD VY+E+A RVH+I++ DS KDPAT+PN  LAKLL  QVDRKLVK TV+ SVYGV
Sbjct: 706 GEKPAD-VYSEIAVRVHNIMKRDSDKDPATNPNASLAKLLIDQVDRKLVKQTVMTSVYGV 764

Query: 576 NYVWPPEQIQKRLENKG 526
            +V   EQI++RLE KG
Sbjct: 765 TFVGAREQIKRRLEEKG 781


>gb|EMJ04424.1| hypothetical protein PRUPE_ppa000868mg [Prunus persica]
          Length = 976

 Score = 95.5 bits (236), Expect = 2e-17
 Identities = 48/77 (62%), Positives = 60/77 (77%)
 Frame = -3

Query: 756 GEQPADDVYTEMARRVHHIIRGDSTKDPATDPNDLLAKLLTGQVDRKLVK*TVIISVYGV 577
           G++PAD VY+E+A RVH I++ DS KDP T PN LLA++L  Q+DRKLVK TV+ SVYGV
Sbjct: 704 GDKPAD-VYSEIAARVHEIMKRDSNKDPTTSPNALLARILVNQIDRKLVKQTVMTSVYGV 762

Query: 576 NYVWPPEQIQKRLENKG 526
            YV   EQI++RLE KG
Sbjct: 763 TYVGAREQIKRRLEEKG 779


>gb|EXB42921.1| DNA-directed RNA polymerase 3 [Morus notabilis]
          Length = 429

 Score = 94.7 bits (234), Expect = 3e-17
 Identities = 50/77 (64%), Positives = 60/77 (77%)
 Frame = -3

Query: 756 GEQPADDVYTEMARRVHHIIRGDSTKDPATDPNDLLAKLLTGQVDRKLVK*TVIISVYGV 577
           GE+PAD VY+E+ARRVH ++  DS KDPA++PN LLAK+L  QVDRKLVK TV+ SVYGV
Sbjct: 125 GEKPAD-VYSEIARRVHDMMLRDSNKDPASNPNALLAKILIDQVDRKLVKQTVMTSVYGV 183

Query: 576 NYVWPPEQIQKRLENKG 526
            YV   EQI +RL  KG
Sbjct: 184 TYVGAREQIMRRLHEKG 200


>ref|XP_002308414.1| hypothetical protein POPTR_0006s19490g [Populus trichocarpa]
           gi|222854390|gb|EEE91937.1| hypothetical protein
           POPTR_0006s19490g [Populus trichocarpa]
          Length = 982

 Score = 94.7 bits (234), Expect = 3e-17
 Identities = 50/76 (65%), Positives = 61/76 (80%)
 Frame = -3

Query: 753 EQPADDVYTEMARRVHHIIRGDSTKDPATDPNDLLAKLLTGQVDRKLVK*TVIISVYGVN 574
           E+P+D VY+E+A RVH IIR DS KDPAT+P+ LLAK+L  +VDRKLVK TV+ SVYGV 
Sbjct: 711 EKPSD-VYSEIATRVHEIIRRDSNKDPATNPHALLAKVLIDEVDRKLVKQTVMTSVYGVT 769

Query: 573 YVWPPEQIQKRLENKG 526
           YV   EQI++RLE KG
Sbjct: 770 YVGAREQIKRRLEEKG 785


>gb|EPS64933.1| hypothetical protein M569_09836 [Genlisea aurea]
          Length = 952

 Score = 92.8 bits (229), Expect = 1e-16
 Identities = 50/77 (64%), Positives = 58/77 (75%)
 Frame = -3

Query: 756 GEQPADDVYTEMARRVHHIIRGDSTKDPATDPNDLLAKLLTGQVDRKLVK*TVIISVYGV 577
           G +P D VY+E+A RV  I++ DS KDPA DPN +LAKLL GQVDRKLVK TV+ SVYGV
Sbjct: 680 GHKPTD-VYSEIAERVLDIMKSDSEKDPADDPNAVLAKLLIGQVDRKLVKQTVMTSVYGV 738

Query: 576 NYVWPPEQIQKRLENKG 526
            YV   EQI+KRL  KG
Sbjct: 739 TYVGAREQIRKRLAEKG 755


>ref|XP_006296121.1| hypothetical protein CARUB_v10025273mg [Capsella rubella]
           gi|482564829|gb|EOA29019.1| hypothetical protein
           CARUB_v10025273mg [Capsella rubella]
          Length = 991

 Score = 92.8 bits (229), Expect = 1e-16
 Identities = 48/77 (62%), Positives = 61/77 (79%)
 Frame = -3

Query: 756 GEQPADDVYTEMARRVHHIIRGDSTKDPATDPNDLLAKLLTGQVDRKLVK*TVIISVYGV 577
           GE+PAD VY+E++RRVH I++ DS+KDP ++P   LAK+L  QVDRKLVK TV+ SVYGV
Sbjct: 719 GEKPAD-VYSEISRRVHEIMKKDSSKDPESNPTAALAKILITQVDRKLVKQTVMTSVYGV 777

Query: 576 NYVWPPEQIQKRLENKG 526
            YV   EQI++RLE KG
Sbjct: 778 TYVGAREQIKRRLEEKG 794


>ref|NP_973525.2| DNA-directed RNA polymerase 3 [Arabidopsis thaliana]
           gi|330252436|gb|AEC07530.1| DNA-directed RNA polymerase
           3 [Arabidopsis thaliana]
          Length = 895

 Score = 92.8 bits (229), Expect = 1e-16
 Identities = 48/77 (62%), Positives = 61/77 (79%)
 Frame = -3

Query: 756 GEQPADDVYTEMARRVHHIIRGDSTKDPATDPNDLLAKLLTGQVDRKLVK*TVIISVYGV 577
           GE+PAD VY+E++RRVH I++ DS+KDP ++P   LAK+L  QVDRKLVK TV+ SVYGV
Sbjct: 721 GEKPAD-VYSEISRRVHEIMKKDSSKDPESNPTAALAKILITQVDRKLVKQTVMTSVYGV 779

Query: 576 NYVWPPEQIQKRLENKG 526
            YV   EQI++RLE KG
Sbjct: 780 TYVGAREQIKRRLEEKG 796


>ref|NP_179989.1| DNA-directed RNA polymerase 3 [Arabidopsis thaliana]
           gi|3914826|sp|O24600.1|RPOT3_ARATH RecName:
           Full=DNA-directed RNA polymerase 3, chloroplastic;
           Flags: Precursor gi|2330560|emb|CAA69972.1| chloroplast
           single-subunit DNA-dependent RNA polymerase [Arabidopsis
           thaliana] gi|2330564|emb|CAA69717.1| chloroplast
           single-subunit DNA-dependent RNA polymerase [Arabidopsis
           thaliana] gi|4115372|gb|AAD03373.1| chloroplast single
           subunit DNA-dependent RNA polymerase [Arabidopsis
           thaliana] gi|110739160|dbj|BAF01496.1| chloroplast
           single subunit DNA-dependent RNA polymerase [Arabidopsis
           thaliana] gi|330252437|gb|AEC07531.1| DNA-directed RNA
           polymerase 3 [Arabidopsis thaliana]
          Length = 993

 Score = 92.8 bits (229), Expect = 1e-16
 Identities = 48/77 (62%), Positives = 61/77 (79%)
 Frame = -3

Query: 756 GEQPADDVYTEMARRVHHIIRGDSTKDPATDPNDLLAKLLTGQVDRKLVK*TVIISVYGV 577
           GE+PAD VY+E++RRVH I++ DS+KDP ++P   LAK+L  QVDRKLVK TV+ SVYGV
Sbjct: 721 GEKPAD-VYSEISRRVHEIMKKDSSKDPESNPTAALAKILITQVDRKLVKQTVMTSVYGV 779

Query: 576 NYVWPPEQIQKRLENKG 526
            YV   EQI++RLE KG
Sbjct: 780 TYVGAREQIKRRLEEKG 796


>ref|XP_002880548.1| PDE319/SCA3 [Arabidopsis lyrata subsp. lyrata]
           gi|297326387|gb|EFH56807.1| PDE319/SCA3 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 990

 Score = 92.8 bits (229), Expect = 1e-16
 Identities = 48/77 (62%), Positives = 61/77 (79%)
 Frame = -3

Query: 756 GEQPADDVYTEMARRVHHIIRGDSTKDPATDPNDLLAKLLTGQVDRKLVK*TVIISVYGV 577
           GE+PAD VY+E++RRVH I++ DS+KDP ++P   LAK+L  QVDRKLVK TV+ SVYGV
Sbjct: 718 GEKPAD-VYSEISRRVHEIMKKDSSKDPESNPTAALAKILITQVDRKLVKQTVMTSVYGV 776

Query: 576 NYVWPPEQIQKRLENKG 526
            YV   EQI++RLE KG
Sbjct: 777 TYVGAREQIKRRLEEKG 793