BLASTX nr result
ID: Atropa21_contig00033973
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00033973
(743 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006586558.1| PREDICTED: uncharacterized protein LOC102661... 99 6e-39
ref|XP_006480040.1| PREDICTED: uncharacterized protein LOC102624... 105 2e-31
gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis tha... 81 2e-28
emb|CAN82073.1| hypothetical protein VITISV_036538 [Vitis vinifera] 65 2e-26
gb|EPS58738.1| hypothetical protein M569_16075, partial [Genlise... 78 1e-24
emb|CAN65229.1| hypothetical protein VITISV_011708 [Vitis vinifera] 61 3e-23
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t... 73 3e-23
gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arab... 70 6e-23
gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsi... 68 1e-21
dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis t... 66 1e-21
ref|XP_006299226.1| hypothetical protein CARUB_v10015375mg, part... 64 1e-21
gb|AAT71979.1| At5g39185 [Arabidopsis thaliana] 66 1e-21
gb|EPS60009.1| hypothetical protein M569_14795, partial [Genlise... 68 1e-21
ref|XP_006299524.1| hypothetical protein CARUB_v10015696mg, part... 54 1e-20
emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis th... 81 2e-20
dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis t... 79 5e-20
dbj|BAA97099.1| retroelement pol polyprotein-like [Arabidopsis t... 69 8e-20
dbj|BAB08885.1| retroelement pol polyprotein-like [Arabidopsis t... 78 2e-19
ref|XP_006397294.1| hypothetical protein EUTSA_v10029485mg [Eutr... 74 3e-19
ref|XP_006418883.1| hypothetical protein EUTSA_v10003063mg [Eutr... 75 7e-18
>ref|XP_006586558.1| PREDICTED: uncharacterized protein LOC102661920 [Glycine max]
Length = 516
Score = 99.4 bits (246), Expect(3) = 6e-39
Identities = 44/72 (61%), Positives = 60/72 (83%)
Frame = +1
Query: 355 LENWWTINSLLVSWIRNTIEPTLRSTISHKEEAKEL*TSIRERFAIINGPRMQQLKAELA 534
+++WWT+NS++VSWI NTIEP LRSTI+++E A+EL I++RF+I NGPR+QQLK+ELA
Sbjct: 87 IDDWWTVNSMIVSWIFNTIEPKLRSTITYRENAQELWDDIKQRFSISNGPRIQQLKSELA 146
Query: 535 ECKQKERTIVDY 570
CKQ +IV Y
Sbjct: 147 NCKQNGDSIVTY 158
Score = 56.2 bits (134), Expect(3) = 6e-39
Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Frame = +2
Query: 146 NRAEENKIQIKTITP*DIASNDNPKTMVTQV*LKRE-YKECARSIRTALRARKKFGFVDG 322
N+ E K I+P D+ S+DNP ++TQV LK E Y E AR++R +LRAR+KF FVDG
Sbjct: 16 NKDESGSHLKKQISPYDLYSSDNPGNIITQVQLKGENYDEWARAVRGSLRARRKFRFVDG 75
Score = 53.1 bits (126), Expect(3) = 6e-39
Identities = 21/46 (45%), Positives = 30/46 (65%)
Frame = +3
Query: 606 NYEHIPTCTCGKCTCNLGTVLEAKREEEKVHRFLMRLEEGTYGIVR 743
+++ IP CTC C C + L KREEEK+H+FLM L++ + VR
Sbjct: 171 DFDQIPMCTCNGCKCGISAALNKKREEEKLHQFLMGLDDTQFRTVR 216
>ref|XP_006480040.1| PREDICTED: uncharacterized protein LOC102624694 isoform X1 [Citrus
sinensis] gi|568852764|ref|XP_006480041.1| PREDICTED:
uncharacterized protein LOC102624694 isoform X2 [Citrus
sinensis] gi|568852766|ref|XP_006480042.1| PREDICTED:
uncharacterized protein LOC102624694 isoform X3 [Citrus
sinensis]
Length = 320
Score = 105 bits (261), Expect(2) = 2e-31
Identities = 47/72 (65%), Positives = 61/72 (84%)
Frame = +1
Query: 355 LENWWTINSLLVSWIRNTIEPTLRSTISHKEEAKEL*TSIRERFAIINGPRMQQLKAELA 534
L++WWT+NS++VSWI NTIEPTLRSTI+H E AK+L I+ERF++ NGPR+ QLK+ELA
Sbjct: 10 LDDWWTVNSMIVSWILNTIEPTLRSTITHMEVAKKLWDDIKERFSVGNGPRVHQLKSELA 69
Query: 535 ECKQKERTIVDY 570
ECKQ+ TI+ Y
Sbjct: 70 ECKQRGMTILSY 81
Score = 58.2 bits (139), Expect(2) = 2e-31
Identities = 25/46 (54%), Positives = 31/46 (67%)
Frame = +3
Query: 606 NYEHIPTCTCGKCTCNLGTVLEAKREEEKVHRFLMRLEEGTYGIVR 743
NYE P C+CG CTC L L K EEE++H+FLM L++ YG VR
Sbjct: 94 NYEQYPICSCGGCTCELEAKLNKKCEEERLHQFLMGLDDTIYGSVR 139
>gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis thaliana]
Length = 1468
Score = 80.9 bits (198), Expect(3) = 2e-28
Identities = 36/73 (49%), Positives = 56/73 (76%)
Frame = +1
Query: 352 NLENWWTINSLLVSWIRNTIEPTLRSTISHKEEAKEL*TSIRERFAIINGPRMQQLKAEL 531
+LE+W TIN+LLVSW++ TI+ L + ISH++ A++L IR+RF++ NGP+ Q++KA+L
Sbjct: 76 DLEDWLTINALLVSWMKMTIDSELLTNISHRDVARDLWEQIRKRFSVSNGPKNQKMKADL 135
Query: 532 AECKQKERTIVDY 570
A CKQ+ T+ Y
Sbjct: 136 ATCKQEGMTVEGY 148
Score = 46.6 bits (109), Expect(3) = 2e-28
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = +3
Query: 606 NYEHIPTCTCGKCTCNLGTVLEAKREEEKVHRFLMRLEEGTYGIVR 743
+Y + C CG+C CNLGT E RE++ VH++L L E + +R
Sbjct: 161 SYRPLRICKCGRCICNLGTDQEKYREDDMVHQYLYGLNETKFHTIR 206
Score = 45.4 bits (106), Expect(3) = 2e-28
Identities = 23/50 (46%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Frame = +2
Query: 176 KTITP*DIASNDNPKTMVTQV*LK-REYKECARSIRTALRARKKFGFVDG 322
+TI+P D+ + DN +++ LK Y+E A +TALR+RKKFGF+DG
Sbjct: 16 RTISPYDLTAADNSGAVISHPILKTNNYEEWACGFKTALRSRKKFGFLDG 65
>emb|CAN82073.1| hypothetical protein VITISV_036538 [Vitis vinifera]
Length = 1157
Score = 65.5 bits (158), Expect(3) = 2e-26
Identities = 28/46 (60%), Positives = 34/46 (73%)
Frame = +3
Query: 606 NYEHIPTCTCGKCTCNLGTVLEAKREEEKVHRFLMRLEEGTYGIVR 743
NY+ IP CTC +C C + T LE KREEE+VH+FLM L+E YG VR
Sbjct: 112 NYDSIPVCTCTRCKCKITTQLEKKREEERVHQFLMGLDEDGYGTVR 157
Score = 58.5 bits (140), Expect(3) = 2e-26
Identities = 31/72 (43%), Positives = 42/72 (58%)
Frame = +1
Query: 355 LENWWTINSLLVSWIRNTIEPTLRSTISHKEEAKEL*TSIRERFAIINGPRMQQLKAELA 534
LE+WWTINS+LVSW EL I+++F+I NGPR+QQLK+ L
Sbjct: 48 LEDWWTINSMLVSW--------------------ELWEEIKQQFSIGNGPRVQQLKSYLV 87
Query: 535 ECKQKERTIVDY 570
CKQ+ + I+ Y
Sbjct: 88 NCKQEGQGIIVY 99
Score = 42.0 bits (97), Expect(3) = 2e-26
Identities = 23/47 (48%), Positives = 29/47 (61%)
Frame = +2
Query: 182 ITP*DIASNDNPKTMVTQV*LKREYKECARSIRTALRARKKFGFVDG 322
+TP + SNDNP ++TQV LK ALRA+KK+GFVDG
Sbjct: 2 LTPYALTSNDNPGNIITQVQLK------------ALRAKKKYGFVDG 36
>gb|EPS58738.1| hypothetical protein M569_16075, partial [Genlisea aurea]
Length = 156
Score = 77.8 bits (190), Expect(3) = 1e-24
Identities = 37/73 (50%), Positives = 52/73 (71%)
Frame = +1
Query: 352 NLENWWTINSLLVSWIRNTIEPTLRSTISHKEEAKEL*TSIRERFAIINGPRMQQLKAEL 531
++++W +NSLLV+WI NTIEP LRSTI + K L +R+RF I +GPR+Q LK EL
Sbjct: 35 SVDDWEQLNSLLVAWIFNTIEPNLRSTIMISDLVKPLWDDLRDRFGISHGPRLQYLKQEL 94
Query: 532 AECKQKERTIVDY 570
A+C+Q ++V Y
Sbjct: 95 AKCRQGGDSVVQY 107
Score = 47.8 bits (112), Expect(3) = 1e-24
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +3
Query: 612 EHIPTCTCGKCTCNLGTVLEAKREEEKVHRFLMRL 716
+ +PTC CG C CNL L KRE +K+H+FL+ L
Sbjct: 122 DSLPTCDCGGCKCNLNLALNRKRETDKIHQFLLGL 156
Score = 35.0 bits (79), Expect(3) = 1e-24
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +2
Query: 254 YKECARSIRTALRARKKFGFVDG 322
Y+E AR IR LRA++K+GF+DG
Sbjct: 3 YEEWARGIRAGLRAKRKYGFLDG 25
>emb|CAN65229.1| hypothetical protein VITISV_011708 [Vitis vinifera]
Length = 1149
Score = 61.2 bits (147), Expect(3) = 3e-23
Identities = 27/45 (60%), Positives = 32/45 (71%)
Frame = +3
Query: 606 NYEHIPTCTCGKCTCNLGTVLEAKREEEKVHRFLMRLEEGTYGIV 740
NY+ +P C C C CNL VLE KREEE+VH+FLM L+E YG V
Sbjct: 124 NYDKMPVCNCVGCKCNLTIVLEKKREEERVHQFLMGLDEEGYGTV 168
Score = 48.1 bits (113), Expect(3) = 3e-23
Identities = 27/72 (37%), Positives = 34/72 (47%)
Frame = +1
Query: 355 LENWWTINSLLVSWIRNTIEPTLRSTISHKEEAKEL*TSIRERFAIINGPRMQQLKAELA 534
+ENWWTINS+ ERF+I NGPR+QQL+ +LA
Sbjct: 71 IENWWTINSM-------------------------------ERFSIGNGPRVQQLRLDLA 99
Query: 535 ECKQKERTIVDY 570
CKQ + IV Y
Sbjct: 100 NCKQNGQVIVTY 111
Score = 46.2 bits (108), Expect(3) = 3e-23
Identities = 24/49 (48%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Frame = +2
Query: 203 SNDNPKTMVTQV*LKRE-YKECARSIRTALRARKKFGFVDGKKRSRIKS 346
SNDN ++TQV L+ E Y E AR++ TALRA+KK+GF DG + +++
Sbjct: 19 SNDNSGNIITQVQLRGENYDEWARAMWTALRAKKKYGFXDGXIKQPVEN 67
>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1491
Score = 72.8 bits (177), Expect(3) = 3e-23
Identities = 29/71 (40%), Positives = 52/71 (73%)
Frame = +1
Query: 358 ENWWTINSLLVSWIRNTIEPTLRSTISHKEEAKEL*TSIRERFAIINGPRMQQLKAELAE 537
ENW +NS++V WIR +IEP ++ST++ +A +L + +++RF++ N R+ Q+KA+LA
Sbjct: 84 ENWQAVNSMIVGWIRASIEPKVKSTVTFISDAHQLWSELKQRFSVGNKVRVHQIKAQLAA 143
Query: 538 CKQKERTIVDY 570
C+Q + ++DY
Sbjct: 144 CRQDGQPVIDY 154
Score = 44.7 bits (104), Expect(3) = 3e-23
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = +3
Query: 609 YEHIPTCTCGKCTCNLGTVLEAKREEEKVHRFLMRLEEGTYG 734
Y+ I C CG CTC +REEEK+H+F++ L++ +G
Sbjct: 168 YKPITVCKCGLCTCGATLEPSKEREEEKIHQFVLGLDDSRFG 209
Score = 37.7 bits (86), Expect(3) = 3e-23
Identities = 18/51 (35%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Frame = +2
Query: 173 IKTITP*DIASNDNPKTMVTQV*LKRE-YKECARSIRTALRARKKFGFVDG 322
+ ++P +AS+DNP M++ V L + Y E + + AL+A++K GF++G
Sbjct: 21 VTKVSPYTLASSDNPGAMISSVMLTGDNYNEWSTEMLNALQAKRKTGFING 71
>gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arabidopsis thaliana]
Length = 1486
Score = 70.1 bits (170), Expect(3) = 6e-23
Identities = 32/73 (43%), Positives = 52/73 (71%)
Frame = +1
Query: 352 NLENWWTINSLLVSWIRNTIEPTLRSTISHKEEAKEL*TSIRERFAIINGPRMQQLKAEL 531
+ E+W N+L+VSW++ TI+ T+ +++SH +++ EL T I++RF + NG R+Q+LK EL
Sbjct: 80 DFEDWTANNALVVSWMKLTIDETVSTSMSHLDDSHELWTHIQKRFGVKNGQRVQRLKTEL 139
Query: 532 AECKQKERTIVDY 570
A C+QK I Y
Sbjct: 140 ATCRQKGVAIETY 152
Score = 50.8 bits (120), Expect(3) = 6e-23
Identities = 25/50 (50%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Frame = +2
Query: 176 KTITP*DIASNDNPKTMVTQV*LKR-EYKECARSIRTALRARKKFGFVDG 322
+TI+P D+ S DNP T++++ L+ Y E A ++R AL+ARKKFGF DG
Sbjct: 20 RTISPYDLTSGDNPGTLISKPLLRGPNYDEWATNLRLALKARKKFGFADG 69
Score = 33.5 bits (75), Expect(3) = 6e-23
Identities = 13/23 (56%), Positives = 19/23 (82%)
Frame = +3
Query: 675 KREEEKVHRFLMRLEEGTYGIVR 743
+REE+K+H+FLM L+E YG V+
Sbjct: 178 EREEDKLHQFLMGLDESVYGAVK 200
>gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1413
Score = 67.8 bits (164), Expect(3) = 1e-21
Identities = 27/71 (38%), Positives = 50/71 (70%)
Frame = +1
Query: 358 ENWWTINSLLVSWIRNTIEPTLRSTISHKEEAKEL*TSIRERFAIINGPRMQQLKAELAE 537
ENW +NS++V WIR +IEP ++ST++ +A +L + +++RF++ N + Q+K +LA
Sbjct: 84 ENWQAVNSMIVGWIRASIEPKVKSTVTFICDAHQLWSELKQRFSVGNKVHVHQIKTQLAA 143
Query: 538 CKQKERTIVDY 570
C+Q + ++DY
Sbjct: 144 CRQDGQPVIDY 154
Score = 44.7 bits (104), Expect(3) = 1e-21
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = +3
Query: 609 YEHIPTCTCGKCTCNLGTVLEAKREEEKVHRFLMRLEEGTYG 734
Y+ I C CG CTC +REEEK+H+F++ L++ +G
Sbjct: 168 YKPITVCKCGLCTCGATLEPSKEREEEKIHQFVLGLDDSRFG 209
Score = 37.7 bits (86), Expect(3) = 1e-21
Identities = 18/51 (35%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Frame = +2
Query: 173 IKTITP*DIASNDNPKTMVTQV*LKRE-YKECARSIRTALRARKKFGFVDG 322
+ ++P +AS+DNP M++ V L + Y E + + AL+A++K GF++G
Sbjct: 21 VTKVSPYTLASSDNPGAMISSVMLTGDNYNEWSTKMLNALQAKRKTGFING 71
>dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1462
Score = 65.9 bits (159), Expect(3) = 1e-21
Identities = 29/73 (39%), Positives = 51/73 (69%)
Frame = +1
Query: 352 NLENWWTINSLLVSWIRNTIEPTLRSTISHKEEAKEL*TSIRERFAIINGPRMQQLKAEL 531
+ ++W N+L+VSW++ TI +L +++SH +++ ++ T I++RF + NG R+Q+LK EL
Sbjct: 79 DFDDWIANNALVVSWMKLTIHESLATSMSHLDDSHDMWTHIQKRFGVKNGQRIQRLKTEL 138
Query: 532 AECKQKERTIVDY 570
A C+QK I Y
Sbjct: 139 ATCRQKGTPIETY 151
Score = 50.8 bits (120), Expect(3) = 1e-21
Identities = 25/50 (50%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Frame = +2
Query: 176 KTITP*DIASNDNPKTMVTQV*LKR-EYKECARSIRTALRARKKFGFVDG 322
+TI+P D+ S DNP T++++ L+ Y E A ++R AL+ARKKFGF DG
Sbjct: 19 RTISPYDLTSGDNPGTLISKPLLRGPNYDEWATNLRLALKARKKFGFADG 68
Score = 33.1 bits (74), Expect(3) = 1e-21
Identities = 13/23 (56%), Positives = 19/23 (82%)
Frame = +3
Query: 675 KREEEKVHRFLMRLEEGTYGIVR 743
+REE+K+H+FLM L+E YG V+
Sbjct: 177 EREEDKLHQFLMGLDESMYGAVK 199
>ref|XP_006299226.1| hypothetical protein CARUB_v10015375mg, partial [Capsella rubella]
gi|482567935|gb|EOA32124.1| hypothetical protein
CARUB_v10015375mg, partial [Capsella rubella]
Length = 361
Score = 63.5 bits (153), Expect(3) = 1e-21
Identities = 28/71 (39%), Positives = 47/71 (66%)
Frame = +1
Query: 358 ENWWTINSLLVSWIRNTIEPTLRSTISHKEEAKEL*TSIRERFAIINGPRMQQLKAELAE 537
E+W + S++ WI NT++P +R T++ KE+ EL I++ F+ NGPR+Q++KAEL
Sbjct: 71 EDWISAKSMVTLWILNTVDPKVRRTLAIKEDPMELWKEIKDCFSEGNGPRIQEIKAELML 130
Query: 538 CKQKERTIVDY 570
C Q +++Y
Sbjct: 131 CCQGTMAVIEY 141
Score = 49.7 bits (117), Expect(3) = 1e-21
Identities = 22/46 (47%), Positives = 30/46 (65%)
Frame = +3
Query: 606 NYEHIPTCTCGKCTCNLGTVLEAKREEEKVHRFLMRLEEGTYGIVR 743
N E TCTC C+CNL LE KRE++++H FL+ L+ YG +R
Sbjct: 154 NNETPLTCTCDGCSCNLKVKLEKKREDDRIHHFLLGLDVTIYGGLR 199
Score = 36.6 bits (83), Expect(3) = 1e-21
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = +2
Query: 197 IASNDNPKTMVTQV*LKREYKECARSIRTALRARKKFGFVDGKKRSRIK 343
+A+ DNP ++ QV ++RT LR +KKFGFVDG + K
Sbjct: 26 LATTDNPCVVIAQVQF---------NVRTVLRVKKKFGFVDGSVKEPAK 65
>gb|AAT71979.1| At5g39185 [Arabidopsis thaliana]
Length = 348
Score = 65.9 bits (159), Expect(3) = 1e-21
Identities = 29/73 (39%), Positives = 51/73 (69%)
Frame = +1
Query: 352 NLENWWTINSLLVSWIRNTIEPTLRSTISHKEEAKEL*TSIRERFAIINGPRMQQLKAEL 531
+ ++W N+L+VSW++ TI +L +++SH +++ ++ T I++RF + NG R+Q+LK EL
Sbjct: 79 DFDDWIANNALVVSWMKLTIHESLATSMSHLDDSHDMWTHIQKRFGVKNGQRIQRLKTEL 138
Query: 532 AECKQKERTIVDY 570
A C+QK I Y
Sbjct: 139 ATCRQKGTPIETY 151
Score = 50.8 bits (120), Expect(3) = 1e-21
Identities = 25/50 (50%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Frame = +2
Query: 176 KTITP*DIASNDNPKTMVTQV*LKR-EYKECARSIRTALRARKKFGFVDG 322
+TI+P D+ S DNP T++++ L+ Y E A ++R AL+ARKKFGF DG
Sbjct: 19 RTISPYDLTSGDNPGTLISKPLLRGPNYDEWATNLRLALKARKKFGFADG 68
Score = 33.1 bits (74), Expect(3) = 1e-21
Identities = 13/23 (56%), Positives = 19/23 (82%)
Frame = +3
Query: 675 KREEEKVHRFLMRLEEGTYGIVR 743
+REE+K+H+FLM L+E YG V+
Sbjct: 177 EREEDKLHQFLMGLDESMYGAVK 199
>gb|EPS60009.1| hypothetical protein M569_14795, partial [Genlisea aurea]
Length = 156
Score = 68.2 bits (165), Expect(3) = 1e-21
Identities = 30/73 (41%), Positives = 50/73 (68%)
Frame = +1
Query: 352 NLENWWTINSLLVSWIRNTIEPTLRSTISHKEEAKEL*TSIRERFAIINGPRMQQLKAEL 531
+++ W +NS+LV+WI NT+EP LR+T++ + L ++ERF + +GPR+ QLK +L
Sbjct: 35 SVDLWEQVNSMLVAWIINTVEPGLRTTVTITDLVFPLWNDLQERFCVSHGPRLTQLKIDL 94
Query: 532 AECKQKERTIVDY 570
A C+Q ++V Y
Sbjct: 95 ARCQQGGDSVVQY 107
Score = 47.0 bits (110), Expect(3) = 1e-21
Identities = 18/33 (54%), Positives = 23/33 (69%)
Frame = +3
Query: 618 IPTCTCGKCTCNLGTVLEAKREEEKVHRFLMRL 716
+P+C CG C CNL L KRE +K+H+FLM L
Sbjct: 124 LPSCNCGGCRCNLNLQLNRKRESDKIHQFLMGL 156
Score = 34.7 bits (78), Expect(3) = 1e-21
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +2
Query: 254 YKECARSIRTALRARKKFGFVDG 322
Y E A+++R LRA+KK+GFVDG
Sbjct: 3 YDEWAKAMRAGLRAKKKYGFVDG 25
>ref|XP_006299524.1| hypothetical protein CARUB_v10015696mg, partial [Capsella rubella]
gi|482568233|gb|EOA32422.1| hypothetical protein
CARUB_v10015696mg, partial [Capsella rubella]
Length = 322
Score = 53.9 bits (128), Expect(3) = 1e-20
Identities = 21/46 (45%), Positives = 30/46 (65%)
Frame = +3
Query: 606 NYEHIPTCTCGKCTCNLGTVLEAKREEEKVHRFLMRLEEGTYGIVR 743
NYE C CG CTC + LE K+EE+++H FL+ L+E +G +R
Sbjct: 144 NYETPVVCNCGGCTCEINAKLEKKKEEDRIHHFLLGLDEAVFGGMR 189
Score = 49.3 bits (116), Expect(3) = 1e-20
Identities = 22/47 (46%), Positives = 33/47 (70%)
Frame = +1
Query: 430 TISHKEEAKEL*TSIRERFAIINGPRMQQLKAELAECKQKERTIVDY 570
T+ +KE+ EL I++RF NGPR+Q++KAELA C+Q ++DY
Sbjct: 85 TLGNKEDPAELWKEIKDRFCEGNGPRIQEIKAELALCRQGYMRVIDY 131
Score = 43.5 bits (101), Expect(3) = 1e-20
Identities = 20/43 (46%), Positives = 31/43 (72%), Gaps = 1/43 (2%)
Frame = +2
Query: 197 IASNDNPKTMVTQV*LKRE-YKECARSIRTALRARKKFGFVDG 322
+A+N+NP ++ V + + E A+++RTALR +KKFGFVDG
Sbjct: 21 LAANENPGAIIAHVHFNGDNFDEWAQTVRTALRVKKKFGFVDG 63
>emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis thaliana]
gi|7269049|emb|CAB79159.1| LTR retrotransposon like
protein [Arabidopsis thaliana]
Length = 1109
Score = 80.9 bits (198), Expect(2) = 2e-20
Identities = 36/73 (49%), Positives = 56/73 (76%)
Frame = +1
Query: 352 NLENWWTINSLLVSWIRNTIEPTLRSTISHKEEAKEL*TSIRERFAIINGPRMQQLKAEL 531
+LE+W TIN+LLVSW++ TI+ L + ISH++ A++L IR+RF++ NGP+ Q++KA+L
Sbjct: 76 DLEDWLTINALLVSWMKMTIDSELLTNISHRDVARDLWEQIRKRFSVSNGPKNQKMKADL 135
Query: 532 AECKQKERTIVDY 570
A CKQ+ T+ Y
Sbjct: 136 ATCKQEGMTVEGY 148
Score = 44.7 bits (104), Expect(2) = 2e-20
Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Frame = +2
Query: 176 KTITP*DIASNDNPKTMVTQV*LK-REYKECARSIRTALRARKKFGFVDG 322
+TI P D+ + DN +++ LK Y+E A +TALR+RKKFGF+DG
Sbjct: 16 RTILPYDLTAADNSGAVISHPILKTNNYEEWACGFKTALRSRKKFGFLDG 65
>dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1109
Score = 79.0 bits (193), Expect(2) = 5e-20
Identities = 36/73 (49%), Positives = 55/73 (75%)
Frame = +1
Query: 352 NLENWWTINSLLVSWIRNTIEPTLRSTISHKEEAKEL*TSIRERFAIINGPRMQQLKAEL 531
+LE+W TIN+LLVSW++ TI+ L + ISH++ A++L IR+RF + NGP+ Q++KA+L
Sbjct: 76 DLEDWLTINALLVSWMKMTIDSELLTNISHRDVARDLWEQIRKRFFVSNGPKNQKMKADL 135
Query: 532 AECKQKERTIVDY 570
A CKQ+ T+ Y
Sbjct: 136 ATCKQEGMTMEGY 148
Score = 45.4 bits (106), Expect(2) = 5e-20
Identities = 23/50 (46%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Frame = +2
Query: 176 KTITP*DIASNDNPKTMVTQV*LK-REYKECARSIRTALRARKKFGFVDG 322
+TI+P D+ + DN +++ LK Y+E A +TALR+RKKFGF+DG
Sbjct: 16 RTISPYDLTAADNSGAVISHPILKTNNYEEWACGFKTALRSRKKFGFLDG 65
>dbj|BAA97099.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1098
Score = 68.9 bits (167), Expect(3) = 8e-20
Identities = 30/72 (41%), Positives = 50/72 (69%)
Frame = +1
Query: 355 LENWWTINSLLVSWIRNTIEPTLRSTISHKEEAKEL*TSIRERFAIINGPRMQQLKAELA 534
L +W NS+++ WIR +I+PT+RST++ +AK+L S+++RF+ NG R Q LK E+
Sbjct: 69 LSSWKAANSMIIGWIRTSIDPTIRSTVAFVSDAKDLWDSLKQRFSNGNGVRKQLLKDEIL 128
Query: 535 ECKQKERTIVDY 570
CKQ ++++ Y
Sbjct: 129 ACKQDGQSVLVY 140
Score = 41.2 bits (95), Expect(3) = 8e-20
Identities = 19/53 (35%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Frame = +2
Query: 167 IQIKTITP*DIASNDNPKTMVTQV*LKRE-YKECARSIRTALRARKKFGFVDG 322
+ + T +P I ++DNP +++ V LK + Y E A + +L+A++K GF+DG
Sbjct: 6 VPVTTPSPYGITASDNPGALISSVILKEDNYSEWAEELMNSLQAKQKLGFLDG 58
Score = 33.5 bits (75), Expect(3) = 8e-20
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 630 TCGKCTCNLGTVLEAKREEEKVHRFLMRLEE 722
T CTC + +RE++KVH+FL+ L+E
Sbjct: 156 TSRTCTCEAAPDIAKEREDDKVHQFLLNLDE 186
>dbj|BAB08885.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 370
Score = 78.2 bits (191), Expect(3) = 2e-19
Identities = 32/73 (43%), Positives = 54/73 (73%)
Frame = +1
Query: 352 NLENWWTINSLLVSWIRNTIEPTLRSTISHKEEAKEL*TSIRERFAIINGPRMQQLKAEL 531
+ ENW T+NS++V WIR +IEP ++ST++ +A L +R+RF++ N R+ Q+KA+L
Sbjct: 85 DFENWKTVNSMIVGWIRVSIEPKVKSTVTFISDAHLLWDELRQRFSVTNNVRVHQIKAQL 144
Query: 532 AECKQKERTIVDY 570
A C+Q+ +T++DY
Sbjct: 145 ASCRQEGQTVIDY 157
Score = 38.9 bits (89), Expect(3) = 2e-19
Identities = 18/47 (38%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Frame = +2
Query: 185 TP*DIASNDNPKTMVTQV*LKRE-YKECARSIRTALRARKKFGFVDG 322
+P ++++DNP T++T V L + Y E + + AL+A++K GF+DG
Sbjct: 28 SPYTLSNSDNPGTLITSVVLNGDNYNEWSEEMLNALQAKRKTGFIDG 74
Score = 25.0 bits (53), Expect(3) = 2e-19
Identities = 11/31 (35%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Frame = +3
Query: 648 CNLGTVLEA---KREEEKVHRFLMRLEEGTY 731
C G+VL A +R++EK+H+F++ L+ +
Sbjct: 177 CPHGSVLTAIVKERDDEKLHQFVLGLDSARF 207
>ref|XP_006397294.1| hypothetical protein EUTSA_v10029485mg [Eutrema salsugineum]
gi|557098311|gb|ESQ38747.1| hypothetical protein
EUTSA_v10029485mg [Eutrema salsugineum]
Length = 196
Score = 73.6 bits (179), Expect(3) = 3e-19
Identities = 33/72 (45%), Positives = 52/72 (72%)
Frame = +1
Query: 355 LENWWTINSLLVSWIRNTIEPTLRSTISHKEEAKEL*TSIRERFAIINGPRMQQLKAELA 534
LE W +NS+LV+WI NTIE L++TIS +EAKEL ++ +F + NGP++ +L+A++A
Sbjct: 56 LEQWEVVNSMLVAWIMNTIESNLKTTISMVDEAKELWDDLKLQFLVGNGPQISELRADIA 115
Query: 535 ECKQKERTIVDY 570
C+Q +I+ Y
Sbjct: 116 NCRQNGDSIMVY 127
Score = 35.8 bits (81), Expect(3) = 3e-19
Identities = 16/43 (37%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Frame = +2
Query: 197 IASNDNPKTMVTQV*LKRE-YKECARSIRTALRARKKFGFVDG 322
I +D P ++T + L+ E Y++ A+ +R ALR ++K GF++G
Sbjct: 3 IHPSDRPGDLITTMQLRGENYEDWAKHVRNALRTKRKLGFIEG 45
Score = 32.3 bits (72), Expect(3) = 3e-19
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = +3
Query: 609 YEHIPTCTCGKCTCNLGTVLEAKREEEKVHRFLMRLEEGTYGIVR 743
Y+ I TC+CG+ L LE EEE+ + FL L+ +G VR
Sbjct: 140 YKPIRTCSCGE----LRAQLEEDLEEERTNTFLTGLDAERFGTVR 180
>ref|XP_006418883.1| hypothetical protein EUTSA_v10003063mg [Eutrema salsugineum]
gi|557096811|gb|ESQ37319.1| hypothetical protein
EUTSA_v10003063mg [Eutrema salsugineum]
Length = 197
Score = 75.1 bits (183), Expect(3) = 7e-18
Identities = 35/72 (48%), Positives = 51/72 (70%)
Frame = +1
Query: 355 LENWWTINSLLVSWIRNTIEPTLRSTISHKEEAKEL*TSIRERFAIINGPRMQQLKAELA 534
L+ W +NS+LV+WI NTIEP LR ++S E A +L T IRERF++ N PR+ +L+A
Sbjct: 40 LKKWGIVNSMLVAWILNTIEPELRGSVSCAETAHQLWTDIRERFSVDNEPRIYELQAAFN 99
Query: 535 ECKQKERTIVDY 570
KQ+++T+ DY
Sbjct: 100 SYKQEKQTVQDY 111
Score = 34.7 bits (78), Expect(3) = 7e-18
Identities = 15/45 (33%), Positives = 27/45 (60%)
Frame = +3
Query: 609 YEHIPTCTCGKCTCNLGTVLEAKREEEKVHRFLMRLEEGTYGIVR 743
+E + C CG +C + L +R++++ +FLM L+ G +G VR
Sbjct: 125 FEPLMECCCGGKSCKVIKALIEQRDKQRRRQFLMGLDAGRFGNVR 169
Score = 27.3 bits (59), Expect(3) = 7e-18
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = +2
Query: 245 KREYKECARSIRTALRARKKFGFVDG 322
+ Y+ ++ +R +L+A+ K GF+DG
Sbjct: 4 ENNYERWSKLMRNSLKAKNKLGFIDG 29