BLASTX nr result
ID: Atropa21_contig00033952
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00033952
(516 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAX19931.1| viral replicase [Nandina mosaic virus] 340 9e-92
dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica ... 339 2e-91
dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica ... 339 2e-91
dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica ... 339 2e-91
dbj|BAG12138.1| RNA-dependent RNA polymerase [Plantago asiatica ... 339 2e-91
dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica ... 339 2e-91
dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica ... 339 2e-91
dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica ... 339 2e-91
gb|AGW45389.1| RNA-dependent RNA polymerase, partial [Plantago a... 330 1e-88
ref|NP_620836.1| replicase [Plantago asiatica mosaic virus] gi|1... 313 2e-83
ref|NP_702988.1| RNA-dependent RNA polymerase [Tulip virus X] gi... 293 2e-77
ref|NP_042695.1| RNA-dependent RNA polymerase [Cassava common mo... 238 5e-61
gb|AAC54780.1| ORF [Cassava common mosaic virus] 238 5e-61
gb|AAW30634.1| replicase [Tulip virus X] 223 2e-56
gb|ADE10202.1| viral replicase [Hydrangea ringspot virus] 210 2e-52
ref|YP_224084.1| viral replicase [Hydrangea ringspot virus] gi|5... 210 2e-52
ref|YP_004849314.1| replicase [Tamus red mosaic virus] gi|345548... 209 4e-52
gb|ACS28228.1| replicase [Alternanthera mosaic virus] 207 1e-51
gb|ACS28233.1| replicase [Alternanthera mosaic virus] 206 2e-51
gb|ACO35593.1| RNA-dependent RNA polymerase [Alternanthera mosai... 206 2e-51
>gb|AAX19931.1| viral replicase [Nandina mosaic virus]
Length = 1368
Score = 340 bits (873), Expect = 9e-92
Identities = 164/171 (95%), Positives = 170/171 (99%)
Frame = -3
Query: 514 YRTLKRELAQTRHSNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDLYEVVSH 335
YRTLKRELAQTRH+NPFAQ+P+AADALEALGINSHPYAITPHTHAAAKAIESDLYEVVSH
Sbjct: 25 YRTLKRELAQTRHTNPFAQSPDAADALEALGINSHPYAITPHTHAAAKAIESDLYEVVSH 84
Query: 334 YLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRYPQDTVISRLENIPTSI 155
YLPKENPVSFLFMKPAKLR+FHRGPTHGDFFLNAHVEPKDVPRYPQDTV++RLENI TSI
Sbjct: 85 YLPKENPVSFLFMKPAKLRYFHRGPTHGDFFLNAHVEPKDVPRYPQDTVLNRLENISTSI 144
Query: 154 AFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYT 2
AFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYT
Sbjct: 145 AFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYT 195
>dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 339 bits (870), Expect = 2e-91
Identities = 165/171 (96%), Positives = 167/171 (97%)
Frame = -3
Query: 514 YRTLKRELAQTRHSNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDLYEVVSH 335
YR LKRELAQTRH+NPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDLYEVVSH
Sbjct: 25 YRHLKRELAQTRHNNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDLYEVVSH 84
Query: 334 YLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRYPQDTVISRLENIPTSI 155
YLPKENPVSFLFMKPAKLR FHRGPTHGD FLNAHVEPKDVPRYPQDT+I RLENIPTSI
Sbjct: 85 YLPKENPVSFLFMKPAKLRHFHRGPTHGDHFLNAHVEPKDVPRYPQDTIIKRLENIPTSI 144
Query: 154 AFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYT 2
AFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYT
Sbjct: 145 AFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYT 195
>dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 339 bits (870), Expect = 2e-91
Identities = 165/171 (96%), Positives = 167/171 (97%)
Frame = -3
Query: 514 YRTLKRELAQTRHSNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDLYEVVSH 335
YR LKRELAQTRH+NPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDLYEVVSH
Sbjct: 25 YRHLKRELAQTRHNNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDLYEVVSH 84
Query: 334 YLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRYPQDTVISRLENIPTSI 155
YLPKENPVSFLFMKPAKLR FHRGPTHGD FLNAHVEPKDVPRYPQDT+I RLENIPTSI
Sbjct: 85 YLPKENPVSFLFMKPAKLRHFHRGPTHGDHFLNAHVEPKDVPRYPQDTIIKRLENIPTSI 144
Query: 154 AFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYT 2
AFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYT
Sbjct: 145 AFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYT 195
>dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 339 bits (870), Expect = 2e-91
Identities = 165/171 (96%), Positives = 167/171 (97%)
Frame = -3
Query: 514 YRTLKRELAQTRHSNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDLYEVVSH 335
YR LKRELAQTRH+NPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDLYEVVSH
Sbjct: 25 YRHLKRELAQTRHNNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDLYEVVSH 84
Query: 334 YLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRYPQDTVISRLENIPTSI 155
YLPKENPVSFLFMKPAKLR FHRGPTHGD FLNAHVEPKDVPRYPQDT+I RLENIPTSI
Sbjct: 85 YLPKENPVSFLFMKPAKLRHFHRGPTHGDHFLNAHVEPKDVPRYPQDTIIKRLENIPTSI 144
Query: 154 AFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYT 2
AFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYT
Sbjct: 145 AFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYT 195
>dbj|BAG12138.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 339 bits (870), Expect = 2e-91
Identities = 165/171 (96%), Positives = 167/171 (97%)
Frame = -3
Query: 514 YRTLKRELAQTRHSNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDLYEVVSH 335
YR LKRELAQTRH+NPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDLYEVVSH
Sbjct: 25 YRHLKRELAQTRHNNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDLYEVVSH 84
Query: 334 YLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRYPQDTVISRLENIPTSI 155
YLPKENPVSFLFMKPAKLR FHRGPTHGD FLNAHVEPKDVPRYPQDT+I RLENIPTSI
Sbjct: 85 YLPKENPVSFLFMKPAKLRHFHRGPTHGDHFLNAHVEPKDVPRYPQDTIIKRLENIPTSI 144
Query: 154 AFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYT 2
AFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYT
Sbjct: 145 AFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYT 195
>dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 339 bits (870), Expect = 2e-91
Identities = 165/171 (96%), Positives = 167/171 (97%)
Frame = -3
Query: 514 YRTLKRELAQTRHSNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDLYEVVSH 335
YR LKRELAQTRH+NPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDLYEVVSH
Sbjct: 25 YRHLKRELAQTRHNNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDLYEVVSH 84
Query: 334 YLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRYPQDTVISRLENIPTSI 155
YLPKENPVSFLFMKPAKLR FHRGPTHGD FLNAHVEPKDVPRYPQDT+I RLENIPTSI
Sbjct: 85 YLPKENPVSFLFMKPAKLRHFHRGPTHGDHFLNAHVEPKDVPRYPQDTIIKRLENIPTSI 144
Query: 154 AFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYT 2
AFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYT
Sbjct: 145 AFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYT 195
>dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 339 bits (870), Expect = 2e-91
Identities = 165/171 (96%), Positives = 167/171 (97%)
Frame = -3
Query: 514 YRTLKRELAQTRHSNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDLYEVVSH 335
YR LKRELAQTRH+NPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDLYEVVSH
Sbjct: 25 YRHLKRELAQTRHNNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDLYEVVSH 84
Query: 334 YLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRYPQDTVISRLENIPTSI 155
YLPKENPVSFLFMKPAKLR FHRGPTHGD FLNAHVEPKDVPRYPQDT+I RLENIPTSI
Sbjct: 85 YLPKENPVSFLFMKPAKLRHFHRGPTHGDHFLNAHVEPKDVPRYPQDTIIKRLENIPTSI 144
Query: 154 AFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYT 2
AFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYT
Sbjct: 145 AFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYT 195
>dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 339 bits (870), Expect = 2e-91
Identities = 165/171 (96%), Positives = 167/171 (97%)
Frame = -3
Query: 514 YRTLKRELAQTRHSNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDLYEVVSH 335
YR LKRELAQTRH+NPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDLYEVVSH
Sbjct: 25 YRHLKRELAQTRHNNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDLYEVVSH 84
Query: 334 YLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRYPQDTVISRLENIPTSI 155
YLPKENPVSFLFMKPAKLR FHRGPTHGD FLNAHVEPKDVPRYPQDT+I RLENIPTSI
Sbjct: 85 YLPKENPVSFLFMKPAKLRHFHRGPTHGDHFLNAHVEPKDVPRYPQDTIIKRLENIPTSI 144
Query: 154 AFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYT 2
AFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYT
Sbjct: 145 AFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYT 195
>gb|AGW45389.1| RNA-dependent RNA polymerase, partial [Plantago asiatica mosaic
virus]
Length = 669
Score = 330 bits (846), Expect = 1e-88
Identities = 159/171 (92%), Positives = 166/171 (97%)
Frame = -3
Query: 514 YRTLKRELAQTRHSNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDLYEVVSH 335
YR LKRELAQTRH+NPFAQ+PEAADALE LGINSHPYAITPHTHAAAKAIESDLYEVVSH
Sbjct: 25 YRHLKRELAQTRHNNPFAQSPEAADALEVLGINSHPYAITPHTHAAAKAIESDLYEVVSH 84
Query: 334 YLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRYPQDTVISRLENIPTSI 155
YLPKENPVSFLFMKPAKLR FHRGPTHGD FLNAHVEPKDVPRYPQ+T+I RLENIPT+I
Sbjct: 85 YLPKENPVSFLFMKPAKLRHFHRGPTHGDHFLNAHVEPKDVPRYPQETIIKRLENIPTNI 144
Query: 154 AFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYT 2
AF+GDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSL+PQIYT
Sbjct: 145 AFIGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLHPQIYT 195
>ref|NP_620836.1| replicase [Plantago asiatica mosaic virus]
gi|1173174|sp|Q07518.1|RDRP_P1AMV RecName: Full=RNA
replication protein; AltName: Full=156 kDa protein;
AltName: Full=ORF1 protein; Includes: RecName:
Full=RNA-directed RNA polymerase; Includes: RecName:
Full=Helicase gi|311645|emb|CAA79761.1| 156K-protein
[Plantago asiatica mosaic virus]
Length = 1385
Score = 313 bits (801), Expect = 2e-83
Identities = 153/171 (89%), Positives = 161/171 (94%)
Frame = -3
Query: 514 YRTLKRELAQTRHSNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDLYEVVSH 335
YR LKRELAQTRH+NPFAQ+PEAADALEALGINSHPYAIT HTHAAAKAIESDLYEVVSH
Sbjct: 25 YRVLKRELAQTRHTNPFAQSPEAADALEALGINSHPYAITSHTHAAAKAIESDLYEVVSH 84
Query: 334 YLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRYPQDTVISRLENIPTSI 155
YLPKENPVSFLFMKPAKLRFFHRGPTHGD FLNAHVEPKDVPRYPQ+T+I+RL +IPT I
Sbjct: 85 YLPKENPVSFLFMKPAKLRFFHRGPTHGDHFLNAHVEPKDVPRYPQETIINRLADIPTQI 144
Query: 154 AFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYT 2
AFMGDTLHFLSPSF+TALFAHSP+LQTLYATLVLPPE RSLYPQIYT
Sbjct: 145 AFMGDTLHFLSPSFLTALFAHSPRLQTLYATLVLPPEP-STSRSLYPQIYT 194
>ref|NP_702988.1| RNA-dependent RNA polymerase [Tulip virus X]
gi|23491554|dbj|BAC16785.1| RNA-dependent RNA polymerase
[Tulip virus X]
Length = 1361
Score = 293 bits (749), Expect = 2e-77
Identities = 136/171 (79%), Positives = 151/171 (88%)
Frame = -3
Query: 514 YRTLKRELAQTRHSNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDLYEVVSH 335
YR +K+EL TRHSNPFAQ+P AAD LE LGINSHP AITPHTHAAAKAIESDLYEV SH
Sbjct: 25 YRVMKKELTATRHSNPFAQSPAAADTLELLGINSHPLAITPHTHAAAKAIESDLYEVTSH 84
Query: 334 YLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRYPQDTVISRLENIPTSI 155
YLPKENPV+FLFMKP+KLR+FHRGP H D FLNA++EPKDVPRYP DTVI + I T +
Sbjct: 85 YLPKENPVTFLFMKPSKLRYFHRGPQHSDIFLNAYIEPKDVPRYPTDTVIENISEITTPL 144
Query: 154 AFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYT 2
AFMGDTLHFL PSF+T+LFA SPKLQTLYAT+VLPPEALYRLRSLYP++YT
Sbjct: 145 AFMGDTLHFLEPSFITSLFARSPKLQTLYATMVLPPEALYRLRSLYPEVYT 195
>ref|NP_042695.1| RNA-dependent RNA polymerase [Cassava common mosaic virus]
gi|773405|gb|AAC54775.1| ORF 1; putative RNA dependent
RNA polymerase [Cassava common mosaic virus]
gi|1587823|prf||2207297A ORF 1
Length = 1449
Score = 238 bits (608), Expect = 5e-61
Identities = 112/171 (65%), Positives = 137/171 (80%)
Frame = -3
Query: 514 YRTLKRELAQTRHSNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDLYEVVSH 335
YRT+K EL Q + NP+AQT EAAD LE LG+ +HPYAI HTHAA KA+E DLY VSH
Sbjct: 25 YRTIKAELNQAKIINPYAQTGEAADLLETLGVITHPYAIATHTHAAGKALELDLYHSVSH 84
Query: 334 YLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRYPQDTVISRLENIPTSI 155
YLP+++PV+F+FMKPAKL++ RGP H D F+N+ VEPKD+ RYP+ TV+ + I TSI
Sbjct: 85 YLPRKSPVTFMFMKPAKLQYLRRGPQHRDHFVNSWVEPKDLARYPEQTVVDGIPPIQTSI 144
Query: 154 AFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYT 2
AFMGDTLHFL+P FV LFA SPKL+T YAT+VLPPEAL+++ SLYPQIYT
Sbjct: 145 AFMGDTLHFLTPKFVGTLFARSPKLKTFYATMVLPPEALHKMNSLYPQIYT 195
>gb|AAC54780.1| ORF [Cassava common mosaic virus]
Length = 300
Score = 238 bits (608), Expect = 5e-61
Identities = 112/171 (65%), Positives = 137/171 (80%)
Frame = -3
Query: 514 YRTLKRELAQTRHSNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDLYEVVSH 335
YRT+K EL Q + NP+AQT EAAD LE LG+ +HPYAI HTHAA KA+E DLY VSH
Sbjct: 25 YRTIKAELNQAKIINPYAQTGEAADLLETLGVITHPYAIATHTHAAGKALELDLYHSVSH 84
Query: 334 YLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRYPQDTVISRLENIPTSI 155
YLP+++PV+F+FMKPAKL++ RGP H D F+N+ VEPKD+ RYP+ TV+ + I TSI
Sbjct: 85 YLPRKSPVTFMFMKPAKLQYLRRGPQHRDHFVNSWVEPKDLARYPEQTVVDGIPPIQTSI 144
Query: 154 AFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYT 2
AFMGDTLHFL+P FV LFA SPKL+T YAT+VLPPEAL+++ SLYPQIYT
Sbjct: 145 AFMGDTLHFLTPKFVGTLFARSPKLKTFYATMVLPPEALHKMNSLYPQIYT 195
>gb|AAW30634.1| replicase [Tulip virus X]
Length = 144
Score = 223 bits (568), Expect = 2e-56
Identities = 103/132 (78%), Positives = 114/132 (86%)
Frame = -3
Query: 514 YRTLKRELAQTRHSNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDLYEVVSH 335
YR +K+EL TRHSNPFAQ+P AAD LE LGINSHP AITPHTHAAAKAIESDLYEV SH
Sbjct: 13 YRVMKKELTATRHSNPFAQSPAAADTLELLGINSHPLAITPHTHAAAKAIESDLYEVTSH 72
Query: 334 YLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRYPQDTVISRLENIPTSI 155
YLPKENP++FLFMKP+KLR+FHRGP H D FLNAH+EPKDVPRYP DTV+S L I T +
Sbjct: 73 YLPKENPITFLFMKPSKLRYFHRGPQHHDIFLNAHIEPKDVPRYPIDTVVSSLPAITTPL 132
Query: 154 AFMGDTLHFLSP 119
+FMGDTLHFL P
Sbjct: 133 SFMGDTLHFLDP 144
>gb|ADE10202.1| viral replicase [Hydrangea ringspot virus]
Length = 1386
Score = 210 bits (534), Expect = 2e-52
Identities = 100/171 (58%), Positives = 124/171 (72%)
Frame = -3
Query: 514 YRTLKRELAQTRHSNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDLYEVVSH 335
Y++++ L +H NP+A E A+ LE GI S PYA+ HTHAAAK +E DLY VSH
Sbjct: 25 YKSIRTTLQAAKHLNPYAHPSETAEFLERQGIISDPYAVAAHTHAAAKCLELDLYASVSH 84
Query: 334 YLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRYPQDTVISRLENIPTSI 155
Y+PKENPV+FLFMK AKL++F RG GD F+N EPKD RYP DT+ S + I T +
Sbjct: 85 YMPKENPVTFLFMKRAKLQYFRRGTQQGDVFVNTLFEPKDAARYPLDTICSAIPPIQTQM 144
Query: 154 AFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYT 2
AFMGDTLHFL P+F+T LF SP L TLYAT+VLPPEA ++LRSL+P +YT
Sbjct: 145 AFMGDTLHFLEPAFLTDLFDRSPHLNTLYATMVLPPEAKHKLRSLHPLVYT 195
>ref|YP_224084.1| viral replicase [Hydrangea ringspot virus]
gi|56792005|gb|AAW30448.1| viral replicase [Hydrangea
ringspot virus]
Length = 1386
Score = 210 bits (534), Expect = 2e-52
Identities = 100/171 (58%), Positives = 124/171 (72%)
Frame = -3
Query: 514 YRTLKRELAQTRHSNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDLYEVVSH 335
Y++++ L +H NP+A E A+ LE GI S PYA+ HTHAAAK +E DLY VSH
Sbjct: 25 YKSIRTTLQAAKHLNPYAHPSETAEFLERQGIISDPYAVAAHTHAAAKCLELDLYASVSH 84
Query: 334 YLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRYPQDTVISRLENIPTSI 155
Y+PKENPV+FLFMK AKL++F RG GD F+N EPKD RYP DT+ S + I T +
Sbjct: 85 YMPKENPVTFLFMKRAKLQYFRRGTQQGDVFVNTLFEPKDAARYPLDTICSAIPPIQTQM 144
Query: 154 AFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYT 2
AFMGDTLHFL P+F+T LF SP L TLYAT+VLPPEA ++LRSL+P +YT
Sbjct: 145 AFMGDTLHFLEPAFLTDLFDRSPHLNTLYATMVLPPEAKHKLRSLHPLVYT 195
>ref|YP_004849314.1| replicase [Tamus red mosaic virus] gi|345548097|gb|AEO12140.1|
replicase [Tamus red mosaic virus]
Length = 1501
Score = 209 bits (531), Expect = 4e-52
Identities = 104/171 (60%), Positives = 128/171 (74%)
Frame = -3
Query: 514 YRTLKRELAQTRHSNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDLYEVVSH 335
Y+ L++ L+ T +NP+A AA+ LE LGINS+P+A T HTH+AAKAIE+DLY S
Sbjct: 25 YQHLRKTLSHTATTNPYAIAESAANVLEDLGINSNPFATTAHTHSAAKAIENDLYFSASS 84
Query: 334 YLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRYPQDTVISRLENIPTSI 155
LPKENPVSFLFMKPAKLRFFHRGP H D F+N VEPKDV RY DT++S L + TS
Sbjct: 85 LLPKENPVSFLFMKPAKLRFFHRGPQHNDHFINKVVEPKDVARYDPDTLVSSLPTLSTSH 144
Query: 154 AFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYT 2
AFMGD+LHFL SF+ LF+ + +L+TL AT+VLP EA + L S+YP IYT
Sbjct: 145 AFMGDSLHFLPFSFLVRLFSDNVQLKTLVATMVLPAEAKFNLASIYPNIYT 195
>gb|ACS28228.1| replicase [Alternanthera mosaic virus]
Length = 1541
Score = 207 bits (527), Expect = 1e-51
Identities = 96/172 (55%), Positives = 130/172 (75%), Gaps = 2/172 (1%)
Frame = -3
Query: 514 YRTLKRELAQTRHSNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDLYEVVSH 335
YR +K+ +A+T+ NP+AQ P AAD+LE LGI S+P+++ HTHAAAK+IE D+Y++ +
Sbjct: 25 YREIKKTIAETKQYNPYAQDPAAADSLEKLGIESNPFSVRAHTHAAAKSIELDMYKITGY 84
Query: 334 YLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRYPQDTVI--SRLENIPT 161
LPKENP++FLFMK +KL++FHRGP HGD FLNA +EPKDV RY + + S I T
Sbjct: 85 SLPKENPITFLFMKRSKLQYFHRGPQHGDLFLNACIEPKDVTRYALEDLFKPSTTPEIQT 144
Query: 160 SIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIY 5
+AF+GDTLHFL + +F S KLQTLYAT+VLPPEA++R+ S++P IY
Sbjct: 145 RVAFIGDTLHFLPLGAIREIFTSSQKLQTLYATMVLPPEAMHRMHSIHPSIY 196
>gb|ACS28233.1| replicase [Alternanthera mosaic virus]
Length = 1541
Score = 206 bits (525), Expect = 2e-51
Identities = 96/172 (55%), Positives = 130/172 (75%), Gaps = 2/172 (1%)
Frame = -3
Query: 514 YRTLKRELAQTRHSNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDLYEVVSH 335
YR +K+ +A+T+ NP+AQ P AAD+LE LGI S+P+++ HTHAAAK+IE D+Y++ +
Sbjct: 25 YREIKKTIAETKQYNPYAQDPAAADSLEKLGIESNPFSVRAHTHAAAKSIELDMYKITGY 84
Query: 334 YLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRYPQDTVI--SRLENIPT 161
LPKENP++FLFMK +KL++FHRGP HGD FLNA +EPKDV RY + + S I T
Sbjct: 85 SLPKENPITFLFMKRSKLQYFHRGPQHGDLFLNAWIEPKDVTRYNLEDLFKPSITPEIQT 144
Query: 160 SIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIY 5
+AF+GDTLHFL + +F S KLQTLYAT+VLPPEA++R+ S++P IY
Sbjct: 145 RVAFIGDTLHFLPLGAIREIFTSSQKLQTLYATMVLPPEAMHRMHSIHPSIY 196
>gb|ACO35593.1| RNA-dependent RNA polymerase [Alternanthera mosaic virus]
Length = 1541
Score = 206 bits (525), Expect = 2e-51
Identities = 96/172 (55%), Positives = 130/172 (75%), Gaps = 2/172 (1%)
Frame = -3
Query: 514 YRTLKRELAQTRHSNPFAQTPEAADALEALGINSHPYAITPHTHAAAKAIESDLYEVVSH 335
YR +K+ +A+T+ NP+AQ P AAD+LE LGI S+P+++ HTHAAAK+IE D+Y++ +
Sbjct: 25 YREIKKTIAETKQYNPYAQDPAAADSLEKLGIESNPFSVRAHTHAAAKSIELDMYKITGY 84
Query: 334 YLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRYPQDTVI--SRLENIPT 161
LPKENP++FLFMK +KL++FHRGP HGD FLNA +EPKDV RY + + S I T
Sbjct: 85 SLPKENPITFLFMKRSKLQYFHRGPQHGDLFLNACIEPKDVTRYALEDLFKPSITPEIQT 144
Query: 160 SIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIY 5
+AF+GDTLHFL + +F S KLQTLYAT+VLPPEA++R+ S++P IY
Sbjct: 145 RVAFIGDTLHFLPLGAIREIFTSSQKLQTLYATMVLPPEAMHRMHSIHPSIY 196