BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00033873
         (802 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006360858.1| PREDICTED: pre-mRNA-processing protein 40C-l...   260   4e-67
ref|XP_004236882.1| PREDICTED: pre-mRNA-processing protein 40C-l...   254   3e-65
ref|XP_006360860.1| PREDICTED: pre-mRNA-processing protein 40C-l...   251   2e-64
ref|XP_006360861.1| PREDICTED: pre-mRNA-processing protein 40C-l...   234   3e-59
ref|XP_002272014.2| PREDICTED: transcription elongation regulato...    74   6e-11

>ref|XP_006360858.1| PREDICTED: pre-mRNA-processing protein 40C-like isoform X1 [Solanum
           tuberosum] gi|565390252|ref|XP_006360859.1| PREDICTED:
           pre-mRNA-processing protein 40C-like isoform X2 [Solanum
           tuberosum]
          Length = 1038

 Score =  260 bits (664), Expect = 4e-67
 Identities = 150/233 (64%), Positives = 154/233 (66%), Gaps = 3/233 (1%)
 Frame = -3

Query: 692 MASPAWLPQEXXXXXXXXXXXXSATGEPTTSSSTPNADSTQEAAQGKFIPPPGYSVGRAS 513
           MASPAWLPQE            SATGEPTTSSSTPNADSTQEAAQGKFI PPGYSV RAS
Sbjct: 1   MASPAWLPQETQSSSSQTSVMSSATGEPTTSSSTPNADSTQEAAQGKFISPPGYSVCRAS 60

Query: 512 FSYMNXXXXXXXXXXXXXXXXXXXXXXXXSAALQPPIPGQSANVGSSFSYNISQTDNNFS 333
           FSYMN                        SA LQPPIPGQSANVGSSFSYNISQTDNNFS
Sbjct: 61  FSYMNANVPSGSSQQPSSSPVIPSTSAGSSALLQPPIPGQSANVGSSFSYNISQTDNNFS 120

Query: 332 SGPQFSSSTLRPVAPDHAVDVKNXXXXXXXXXXXXXXSTRLSSFIPG---TAAPXXXXXX 162
           SG QFSSSTLRP APDH+VDVKN              STRLSSF+PG    A P      
Sbjct: 121 SGLQFSSSTLRPAAPDHSVDVKNASPAASLQPPLPLVSTRLSSFMPGITAAAGPLISGSN 180

Query: 161 XXXXXSPQMVQTDQTMKQLQNRRGDVAQEMGAITSATFVMQSVSQAGHMSSSS 3
                 PQM+QTDQTMK LQNRR DVAQE G +TSATFVM SVSQA HMSS S
Sbjct: 181 LSFNGGPQMMQTDQTMKPLQNRRVDVAQETGGMTSATFVMHSVSQAVHMSSGS 233


>ref|XP_004236882.1| PREDICTED: pre-mRNA-processing protein 40C-like [Solanum
           lycopersicum]
          Length = 1042

 Score =  254 bits (648), Expect = 3e-65
 Identities = 148/233 (63%), Positives = 155/233 (66%), Gaps = 3/233 (1%)
 Frame = -3

Query: 692 MASPAWLPQEXXXXXXXXXXXXSATGEPTTSSSTPNADSTQEAAQGKFIPPPGYSVGRAS 513
           MASPAWLPQE            SATGEPTTSSSTPNADSTQEAAQGKFI PPGYSV RAS
Sbjct: 1   MASPAWLPQETQSSSSQTSVMSSATGEPTTSSSTPNADSTQEAAQGKFISPPGYSVCRAS 60

Query: 512 FSYMNXXXXXXXXXXXXXXXXXXXXXXXXSAALQPPIPGQSANVGSSFSYNISQTDNNFS 333
           FSYMN                        SA+LQPPIPGQSANVGSSFSYNISQTDNNFS
Sbjct: 61  FSYMNANVPSGSSQQSSSSPVIPSTSAGSSASLQPPIPGQSANVGSSFSYNISQTDNNFS 120

Query: 332 SGPQFSSSTLRPVAPDHAVDVKNXXXXXXXXXXXXXXSTRLSSFIPGTAA---PXXXXXX 162
           SG QFSSSTLRP APDH+VD+ N              STRLSSF+PGTAA   P      
Sbjct: 121 SGLQFSSSTLRPAAPDHSVDI-NASPAASLQPPLPLVSTRLSSFMPGTAASAGPLISGSN 179

Query: 161 XXXXXSPQMVQTDQTMKQLQNRRGDVAQEMGAITSATFVMQSVSQAGHMSSSS 3
                 PQM+QTDQTMK LQNRR D+AQE G +TSAT VM SVSQA HMSS S
Sbjct: 180 LSFNGGPQMMQTDQTMKPLQNRRVDLAQETGGMTSATLVMHSVSQAVHMSSGS 232


>ref|XP_006360860.1| PREDICTED: pre-mRNA-processing protein 40C-like isoform X3 [Solanum
           tuberosum]
          Length = 1036

 Score =  251 bits (642), Expect = 2e-64
 Identities = 148/233 (63%), Positives = 152/233 (65%), Gaps = 3/233 (1%)
 Frame = -3

Query: 692 MASPAWLPQEXXXXXXXXXXXXSATGEPTTSSSTPNADSTQEAAQGKFIPPPGYSVGRAS 513
           MASPAWLPQE            SATGEPTTSSSTPNADSTQEAAQGKFI PPGYSV RAS
Sbjct: 1   MASPAWLPQETQSSSSQTSVMSSATGEPTTSSSTPNADSTQEAAQGKFISPPGYSVCRAS 60

Query: 512 FSYMNXXXXXXXXXXXXXXXXXXXXXXXXSAALQPPIPGQSANVGSSFSYNISQTDNNFS 333
           FSYMN                        SA LQPPIPGQSANVGSSFSYNISQTDNNFS
Sbjct: 61  FSYMNANVPSGSSQQPSSSPVIPSTSAGSSALLQPPIPGQSANVGSSFSYNISQTDNNFS 120

Query: 332 SGPQFSSSTLRPVAPDHAVDVKNXXXXXXXXXXXXXXSTRLSSFIPG---TAAPXXXXXX 162
           SG QFSSSTLRP APDH+VDVKN              STRLSSF+PG    A P      
Sbjct: 121 SGLQFSSSTLRPAAPDHSVDVKNASPAASLQPPLPLVSTRLSSFMPGITAAAGPLISGSN 180

Query: 161 XXXXXSPQMVQTDQTMKQLQNRRGDVAQEMGAITSATFVMQSVSQAGHMSSSS 3
                 PQM+QTDQTMK   NRR DVAQE G +TSATFVM SVSQA HMSS S
Sbjct: 181 LSFNGGPQMMQTDQTMK--PNRRVDVAQETGGMTSATFVMHSVSQAVHMSSGS 231


>ref|XP_006360861.1| PREDICTED: pre-mRNA-processing protein 40C-like isoform X4 [Solanum
           tuberosum]
          Length = 1027

 Score =  234 bits (596), Expect = 3e-59
 Identities = 141/233 (60%), Positives = 147/233 (63%), Gaps = 3/233 (1%)
 Frame = -3

Query: 692 MASPAWLPQEXXXXXXXXXXXXSATGEPTTSSSTPNADSTQEAAQGKFIPPPGYSVGRAS 513
           MASPAWLPQE            SATGEPTTSSSTPNADSTQEAAQGKFI PPGYSV RAS
Sbjct: 1   MASPAWLPQETQSSSSQTSVMSSATGEPTTSSSTPNADSTQEAAQGKFISPPGYSVCRAS 60

Query: 512 FSYMNXXXXXXXXXXXXXXXXXXXXXXXXSAALQPPIPGQSANVGSSFSYNISQTDNNFS 333
           FSYMN                        SA LQPPIPGQSANVGSSFSYNISQTDNNFS
Sbjct: 61  FSYMNANVPSGSSQQPSSSPVIPSTSAGSSALLQPPIPGQSANVGSSFSYNISQTDNNFS 120

Query: 332 SGPQFSSSTLRPVAPDHAVDVKNXXXXXXXXXXXXXXSTRLSSFIPG---TAAPXXXXXX 162
           SG QFSSSTLR  +P  ++                  STRLSSF+PG    A P      
Sbjct: 121 SGLQFSSSTLRNASPAASLQ-----------PPLPLVSTRLSSFMPGITAAAGPLISGSN 169

Query: 161 XXXXXSPQMVQTDQTMKQLQNRRGDVAQEMGAITSATFVMQSVSQAGHMSSSS 3
                 PQM+QTDQTMK LQNRR DVAQE G +TSATFVM SVSQA HMSS S
Sbjct: 170 LSFNGGPQMMQTDQTMKPLQNRRVDVAQETGGMTSATFVMHSVSQAVHMSSGS 222


>ref|XP_002272014.2| PREDICTED: transcription elongation regulator 1-like [Vitis
           vinifera] gi|297738259|emb|CBI27460.3| unnamed protein
           product [Vitis vinifera]
          Length = 1046

 Score = 73.9 bits (180), Expect = 6e-11
 Identities = 67/244 (27%), Positives = 87/244 (35%), Gaps = 24/244 (9%)
 Frame = -3

Query: 692 MASPAWLPQEXXXXXXXXXXXXSATGEPTTSSSTPN---------------------ADS 576
           MASPAWLP E               G P+    TP                      ++S
Sbjct: 1   MASPAWLPVEVQSSASQNPVTGLPAGGPSGGPPTPTGAIAPASVATIRTSEGASGTASNS 60

Query: 575 TQEAAQGKFIPPPGYSVGRASFSYMNXXXXXXXXXXXXXXXXXXXXXXXXSAA---LQPP 405
            QE+AQGKF+  P + +   SFSY                           A+    Q P
Sbjct: 61  IQESAQGKFVNAPPHVLPGPSFSYSGIPHVTTASGTSQQLPSGSVISSNPLASTVVFQTP 120

Query: 404 IPGQSANVGSSFSYNISQTDNNFSSGPQFSSSTLRPVAPDHAVDVKNXXXXXXXXXXXXX 225
           +PG S++ G SFSYNI+     F     F SST                           
Sbjct: 121 VPGPSSSSGPSFSYNIAHKGAGFPGSQPFQSST--------------------------- 153

Query: 224 XSTRLSSFIPGTAAPXXXXXXXXXXXSPQMVQTDQTMKQLQNRRGDVAQEMGAITSATFV 45
                 S   G   P           +PQ+VQ DQT+K   +  G VAQE G+++SA+ V
Sbjct: 154 ------SIASGPRGPTPNAASFSFNGNPQLVQKDQTLK--SDNSGAVAQEAGSMSSASHV 205

Query: 44  MQSV 33
            QSV
Sbjct: 206 SQSV 209