BLASTX nr result

ID: Atropa21_contig00033842 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00033842
         (850 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006358721.1| PREDICTED: uncharacterized protein LOC102596...    85   3e-14
ref|XP_006343440.1| PREDICTED: uncharacterized protein LOC102595...    80   9e-13
ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein A...    60   8e-07
ref|XP_006338203.1| PREDICTED: transmembrane 9 superfamily membe...    44   7e-06

>ref|XP_006358721.1| PREDICTED: uncharacterized protein LOC102596481 [Solanum tuberosum]
          Length = 1135

 Score = 85.1 bits (209), Expect = 3e-14
 Identities = 47/127 (37%), Positives = 71/127 (55%)
 Frame = -3

Query: 848 DLNIYLHFEEKF*K*KVGTQRFQDGDRNTKFFHAYV*G*KENITVEQNPK*EWQLGEIKR 669
           D+  Y H EE++ K K G Q F+DG RNTKFFHAYV G +  + +      E  +    +
Sbjct: 278 DIKRYKHIEEEYWKQKAGMQWFKDGYRNTKFFHAYVKGRRRKMQINAIQTREEDMITTTQ 337

Query: 668 GDF*RGY*ILQGTVYKGRGSK*F*NMDHVPPMITKEQNAHIVDYPSKEEVKRVIFSLNGQ 489
                   + +    + +    +  + H+PP+IT+EQN  +V  P+ EEVK+V+F+ NG 
Sbjct: 338 NIGEEAVNVYKKQFMEDQEVSDYSMLTHIPPIITEEQNEIMVRIPTNEEVKKVVFAHNGD 397

Query: 488 SVSGPDE 468
           S SGPD+
Sbjct: 398 SASGPDD 404


>ref|XP_006343440.1| PREDICTED: uncharacterized protein LOC102595406 [Solanum tuberosum]
          Length = 866

 Score = 80.1 bits (196), Expect = 9e-13
 Identities = 47/132 (35%), Positives = 76/132 (57%), Gaps = 2/132 (1%)
 Frame = -3

Query: 845 LNIYLHFEEKF*K*KVGTQRFQDGDRNTKFFHAYV*G*KENITVE--QNPK*EWQLGEIK 672
           L+ YLH EE++ + K G + FQ+G++NTKFFH+YV G ++ + +   QN + +W   E  
Sbjct: 269 LSRYLHLEEEYWRQKSGLKCFQEGEKNTKFFHSYVTGKRKKLKLNRIQNTQGDWLTEE-- 326

Query: 671 RGDF*RGY*ILQGTVYKGRGSK*F*NMDHVPPMITKEQNAHIVDYPSKEEVKRVIFSLNG 492
           R          Q    + +  K F  ++H+P ++T+EQN  + + P+ EEVK  +F LN 
Sbjct: 327 RDIAAEAIRYFQEQFTEDQSQKEFSLLNHIPRLVTEEQNQKLEELPT-EEVKAAVFGLNK 385

Query: 491 QSVSGPDESTKY 456
           +S  GPD  T +
Sbjct: 386 ESACGPDGFTSF 397


>ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           tuberosum]
          Length = 1035

 Score = 60.5 bits (145), Expect = 8e-07
 Identities = 40/115 (34%), Positives = 59/115 (51%), Gaps = 7/115 (6%)
 Frame = -3

Query: 785 FQDGDRNTKFFHAYV*G*KEN-----ITVEQNP--K*EWQLGEIKRGDF*RGY*ILQGTV 627
           F++GD NTKFFH+YV G ++      I +EQ    K   ++G      F       +   
Sbjct: 4   FKEGDMNTKFFHSYVKGRRKKFHINEIIIEQGVGLKSNSEIGNAAVEYF-------RDQF 56

Query: 626 YKGRGSK*F*NMDHVPPMITKEQNAHIVDYPSKEEVKRVIFSLNGQSVSGPDEST 462
            +   ++ +  +DH+P  IT E+N  +   P  EEVKRV+F+LNG    GPD  T
Sbjct: 57  AEETEAEDYSMIDHIPECITAEENEQMTKLPELEEVKRVVFNLNGNIACGPDGFT 111


>ref|XP_006338203.1| PREDICTED: transmembrane 9 superfamily member 4-like [Solanum
           tuberosum]
          Length = 1068

 Score = 44.3 bits (103), Expect(2) = 7e-06
 Identities = 22/59 (37%), Positives = 34/59 (57%)
 Frame = -3

Query: 587 HVPPMITKEQNAHIVDYPSKEEVKRVIFSLNGQSVSGPDESTKYNVLKKMHYSMASKCW 411
           H+P +I +E+N  +   P +EEVK+V+F LNG S+ G       N+     + + SKCW
Sbjct: 296 HIPCIIIEEENDDMTKLPRQEEVKKVVFELNGFSIEG------LNI-----HQLISKCW 343



 Score = 32.7 bits (73), Expect(2) = 7e-06
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = -1

Query: 700 NKNGNWVKSKEEISEEAIRFYREQFIKEEDPNDFEI 593
           N+ G  V + ++I EEA+ F+  QF +EE   DF +
Sbjct: 258 NEQGEIVCTSQQIGEEAVSFFSRQFKEEEHNQDFSM 293


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