BLASTX nr result
ID: Atropa21_contig00033663
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atropa21_contig00033663 (727 letters) Database: nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAA84682.1| unknown protein (chloroplast) [Nicotiana tabacum]... 96 1e-32 gb|AAA84681.1| unknown protein (chloroplast) [Nicotiana tabacum]... 120 6e-25 ref|XP_002335728.1| predicted protein [Populus trichocarpa] 57 2e-12 >gb|AAA84682.1| unknown protein (chloroplast) [Nicotiana tabacum] gi|224352|prf||1102209F ORF 6 Length = 79 Score = 96.3 bits (238), Expect(2) = 1e-32 Identities = 46/47 (97%), Positives = 46/47 (97%) Frame = -2 Query: 603 LLKVNSHIFFYECNEPIFSSLFIFQKDIETNVRPKYSEDSSDKIKNM 463 LLKVNSHIFFYECNEPIFSSLFIFQKDIETNV PKYSEDSSDKIKNM Sbjct: 33 LLKVNSHIFFYECNEPIFSSLFIFQKDIETNVIPKYSEDSSDKIKNM 79 Score = 70.5 bits (171), Expect(2) = 1e-32 Identities = 33/34 (97%), Positives = 33/34 (97%) Frame = -3 Query: 707 MKVDYFFIPFQNSIIPSRTKHESFDSFGSHAQLL 606 MKVDYF IPFQNSIIPSRTKHESFDSFGSHAQLL Sbjct: 1 MKVDYFSIPFQNSIIPSRTKHESFDSFGSHAQLL 34 >gb|AAA84681.1| unknown protein (chloroplast) [Nicotiana tabacum] gi|224350|prf||1102209D ORF 4 Length = 64 Score = 120 bits (300), Expect = 6e-25 Identities = 60/64 (93%), Positives = 62/64 (96%), Gaps = 1/64 (1%) Frame = +2 Query: 383 MLNRRPILNNKSFLDLKKK-RNNFADNYIFFILSEESSEYFGLTLVSISFWNMNKEEKIG 559 MLNRRPIL+ KSFLDLKKK RNNFADNYIFFILSEESSEYFG+TLVSISFWNMNKEEKIG Sbjct: 1 MLNRRPILSKKSFLDLKKKKRNNFADNYIFFILSEESSEYFGITLVSISFWNMNKEEKIG 60 Query: 560 SLHS 571 SLHS Sbjct: 61 SLHS 64 >ref|XP_002335728.1| predicted protein [Populus trichocarpa] Length = 79 Score = 56.6 bits (135), Expect(2) = 2e-12 Identities = 27/37 (72%), Positives = 30/37 (81%) Frame = -3 Query: 707 MKVDYFFIPFQNSIIPSRTKHESFDSFGSHAQLLNYL 597 MKVDY I + S+IPSRTKHESFDSFGSHAQL+ L Sbjct: 1 MKVDYLSIHCKTSMIPSRTKHESFDSFGSHAQLVQLL 37 Score = 42.4 bits (98), Expect(2) = 2e-12 Identities = 25/45 (55%), Positives = 30/45 (66%), Gaps = 3/45 (6%) Frame = -2 Query: 603 LLKVNSHIFFYECNEPIFSSLFIFQ---KDIETNVRPKYSEDSSD 478 LL NSH+FF + NEPI S FI + + TN RP+YSEDSSD Sbjct: 36 LLMGNSHLFF-DWNEPILFSRFIIRIPKPKLITNPRPEYSEDSSD 79