BLASTX nr result

ID: Atropa21_contig00033049 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00033049
         (492 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006364899.1| PREDICTED: zinc finger CCCH domain-containin...   179   3e-43
ref|XP_004252051.1| PREDICTED: zinc finger CCCH domain-containin...   137   1e-30

>ref|XP_006364899.1| PREDICTED: zinc finger CCCH domain-containing protein 32-like
           [Solanum tuberosum]
          Length = 538

 Score =  179 bits (454), Expect = 3e-43
 Identities = 103/180 (57%), Positives = 116/180 (64%), Gaps = 18/180 (10%)
 Frame = -2

Query: 488 YELHHDMEDRELDERFAGYDFENHLEYDTAYPDMRLVSD------------DEINEYVGE 345
           Y +HHDMEDRELDERFAGYDFENHLEYD AYP++ +VSD             E+NE VGE
Sbjct: 264 YLMHHDMEDRELDERFAGYDFENHLEYDPAYPNIGIVSDVEQNASYYNFENHEMNERVGE 323

Query: 344 ILTPAYERQSVLPKRESPRGLAFRGRGNVXXXXXXXXXXRVNESDPPNHLSRRFDLSRSN 165
            L PA+ R+ V  KRE P  LAFRGR NV          R +E+D P+HLSRRFDLSRSN
Sbjct: 324 FLIPAHGRERVSRKRELPSELAFRGRDNV-DLRDLLKKRRASENDSPDHLSRRFDLSRSN 382

Query: 164 AREQ-RRDRHRPQGSRWMPQRVA-----XXXXXXXXXXXXXVDGTNHLKRLRQSQGSSYR 3
             EQ  RDRHRPQGS+WMPQR A                  ++G N LKRLRQSQGSSYR
Sbjct: 383 VHEQGSRDRHRPQGSQWMPQRRASKVESNVSFSPAFLNRTRLEGANRLKRLRQSQGSSYR 442


>ref|XP_004252051.1| PREDICTED: zinc finger CCCH domain-containing protein 19-like
           [Solanum lycopersicum]
          Length = 511

 Score =  137 bits (346), Expect = 1e-30
 Identities = 85/174 (48%), Positives = 97/174 (55%), Gaps = 12/174 (6%)
 Frame = -2

Query: 488 YELHHDMEDRELDERFAGYDFENHLEYDTAYPDMRLVSD------------DEINEYVGE 345
           Y +HHDMEDRELDERF GYDFENHLEYD AYPD+ +VSD             E+NE VGE
Sbjct: 264 YLMHHDMEDRELDERFTGYDFENHLEYDPAYPDIGIVSDVEQKTSYYNFENHEMNERVGE 323

Query: 344 ILTPAYERQSVLPKRESPRGLAFRGRGNVXXXXXXXXXXRVNESDPPNHLSRRFDLSRSN 165
            L PA+ R+ V  KRE PR LAFRGR NV          R +ESD P+HLSRR     SN
Sbjct: 324 FLIPAHGRERVSRKRELPRELAFRGRDNV-DLRDLLKKRRAHESDSPDHLSRRASKVESN 382

Query: 164 AREQRRDRHRPQGSRWMPQRVAXXXXXXXXXXXXXVDGTNHLKRLRQSQGSSYR 3
                R  +R +                       ++G N LKRLRQSQGSSYR
Sbjct: 383 VSFSPRFSNRTR-----------------------LEGANRLKRLRQSQGSSYR 413


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