BLASTX nr result
ID: Atropa21_contig00033011
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00033011
(839 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ADU56211.1| gag-pol polyprotein [Solanum lycopersicum] 135 6e-63
ref|XP_004228792.1| PREDICTED: uncharacterized protein LOC101263... 130 6e-59
gb|ABI34389.1| Polyprotein, putative [Solanum tuberosum] 143 5e-56
gb|AAT66771.2| Putative polyprotein, identical [Solanum demissum] 137 2e-55
gb|AAT39954.1| Putative integrase, identical [Solanum demissum] 134 2e-53
gb|AAT38724.1| Putative retrotransposon protein, identical [Sola... 124 1e-51
ref|XP_006364939.1| PREDICTED: uncharacterized protein LOC102581... 125 5e-51
gb|AAT38744.1| Putative gag-pol polyprotein, identical [Solanum ... 124 9e-51
gb|AAT39297.2| Gag-pol protein, putative [Solanum demissum] 119 6e-49
ref|XP_004506381.1| PREDICTED: enzymatic polyprotein-like [Cicer... 116 5e-48
gb|EOY08659.1| DNA/RNA polymerases superfamily protein [Theobrom... 117 7e-48
gb|EOY21678.1| DNA/RNA polymerases superfamily protein [Theobrom... 118 2e-47
gb|ABI34354.1| Retrotransposon gag protein [Solanum demissum] 114 3e-47
gb|EOX99963.1| Uncharacterized protein TCM_009073 [Theobroma cacao] 116 3e-47
ref|XP_006356454.1| PREDICTED: uncharacterized protein LOC102599... 128 6e-47
gb|EOY08667.1| Retrotransposon protein, Ty3-gypsy subclass, puta... 118 8e-47
gb|EOY03326.1| DNA/RNA polymerases superfamily protein [Theobrom... 115 1e-46
gb|EOY26451.1| DNA/RNA polymerases superfamily protein [Theobrom... 118 1e-46
gb|EOY20280.1| Uncharacterized protein TCM_045699 [Theobroma cacao] 115 2e-46
gb|EOY20275.1| DNA/RNA polymerases superfamily protein [Theobrom... 115 3e-46
>gb|ADU56211.1| gag-pol polyprotein [Solanum lycopersicum]
Length = 367
Score = 135 bits (341), Expect(2) = 6e-63
Identities = 63/92 (68%), Positives = 75/92 (81%)
Frame = +1
Query: 253 DWGTQFASHF*RCMQKELDTQVVLSIAFHPQMDGQSEETIQVLKDILWTCVIDFGGYWD* 432
D GTQF S F + + EL T++ LS AFHPQ DGQSE TIQVL+D++ CVI+FGG+WD
Sbjct: 63 DRGTQFTSKFWKILHAELGTRLDLSTAFHPQTDGQSERTIQVLEDMICACVIEFGGHWDS 122
Query: 433 FLPLVEFAYNNNYHSSIEMAPFEALYGRRCHS 528
FLPL EF+YNN+YHSSI+MAPFEALYGRRC S
Sbjct: 123 FLPLAEFSYNNSYHSSIDMAPFEALYGRRCRS 154
Score = 132 bits (333), Expect(2) = 6e-63
Identities = 71/104 (68%), Positives = 81/104 (77%), Gaps = 3/104 (2%)
Frame = +3
Query: 537 FDAFKVRP*GTDFLCDSLDKVKLIQERLLRTQSQQKSYVDRKVRALEFIVGEWVLLKVSP 716
FDAF+VRP GTD L DS++KVK IQE+LL QS+QK Y DRKVR LEF+ GE VLLKVSP
Sbjct: 159 FDAFEVRPWGTDLLRDSIEKVKSIQEKLLAAQSRQKEYADRKVRDLEFMEGEQVLLKVSP 218
Query: 717 ---VMRFEKRGKLNLRYISPFEIMQHIGEVAYELDLPP*LLDVH 839
VMRF KRGKL RYI PFE+++ +GEVAYEL LPP L VH
Sbjct: 219 MKAVMRFGKRGKLIPRYIGPFEVLKRVGEVAYELALPPGLSGVH 262
>ref|XP_004228792.1| PREDICTED: uncharacterized protein LOC101263838, partial [Solanum
lycopersicum]
Length = 609
Score = 130 bits (326), Expect(2) = 6e-59
Identities = 61/90 (67%), Positives = 73/90 (81%)
Frame = +1
Query: 259 GTQFASHF*RCMQKELDTQVVLSIAFHPQMDGQSEETIQVLKDILWTCVIDFGGYWD*FL 438
GTQF S F R + +L T++ LS AFHPQ DGQSE TIQVL+D+L CVI+FGG+WD FL
Sbjct: 404 GTQFTSMFWRTLHAKLGTRLDLSTAFHPQTDGQSERTIQVLEDMLCACVIEFGGHWDNFL 463
Query: 439 PLVEFAYNNNYHSSIEMAPFEALYGRRCHS 528
PL+EF+YNN+YHS I+MAPF ALYGRRC S
Sbjct: 464 PLLEFSYNNSYHSGIDMAPFVALYGRRCGS 493
Score = 125 bits (313), Expect(2) = 6e-59
Identities = 67/104 (64%), Positives = 80/104 (76%), Gaps = 3/104 (2%)
Frame = +3
Query: 537 FDAFKVRP*GTDFLCDSLDKVKLIQERLLRTQSQQKSYVDRKVRALEFIVGEWVLLKVSP 716
FDA++V P GTD L DSL+KVK IQE+LL QS+QK Y DRKVR LEF+ G+ VLLKVSP
Sbjct: 498 FDAYEVTPWGTDILRDSLEKVKSIQEKLLVAQSRQKEYADRKVRDLEFMEGDQVLLKVSP 557
Query: 717 ---VMRFEKRGKLNLRYISPFEIMQHIGEVAYELDLPP*LLDVH 839
VMRF KR KL+ RYI PF++++ +GEVAYEL LPP L VH
Sbjct: 558 MKGVMRFGKRCKLSPRYIGPFDVLKRVGEVAYELALPPALSGVH 601
>gb|ABI34389.1| Polyprotein, putative [Solanum tuberosum]
Length = 545
Score = 143 bits (360), Expect(2) = 5e-56
Identities = 69/94 (73%), Positives = 77/94 (81%)
Frame = +1
Query: 253 DWGTQFASHF*RCMQKELDTQVVLSIAFHPQMDGQSEETIQVLKDILWTCVIDFGGYWD* 432
D G+QF S F R Q+EL T+V LS AFHPQ DGQSE TIQVL+D+L CV+DFGG WD
Sbjct: 89 DRGSQFTSSFLRAFQEELGTRVHLSTAFHPQTDGQSERTIQVLEDMLRACVMDFGGQWDQ 148
Query: 433 FLPLVEFAYNNNYHSSIEMAPFEALYGRRCHSLV 534
FLPL EFAYNN+YHSSI+MAPFEALYGRRCHS V
Sbjct: 149 FLPLAEFAYNNSYHSSIQMAPFEALYGRRCHSPV 182
Score = 102 bits (254), Expect(2) = 5e-56
Identities = 54/104 (51%), Positives = 75/104 (72%), Gaps = 3/104 (2%)
Frame = +3
Query: 537 FDAFKVRP*GTDFLCDSLDKVKLIQERLLRTQSQQKSYVDRKVRALEFIVGEWVLLKVSP 716
F++ + R GTD L ++LD+V++IQ+RL QS+ +SY D++ R L F VG+ V L+VSP
Sbjct: 185 FESTEPRLRGTDLLQEALDQVRVIQDRLRTAQSRHQSYADQRRRPLRFSVGDRVFLRVSP 244
Query: 717 ---VMRFEKRGKLNLRYISPFEIMQHIGEVAYELDLPP*LLDVH 839
VMRF +RGKL+ RYI PFEI++ +GEVAYEL LPP +H
Sbjct: 245 MKGVMRFGRRGKLSPRYIGPFEILRTVGEVAYELALPPVFSAIH 288
>gb|AAT66771.2| Putative polyprotein, identical [Solanum demissum]
Length = 1771
Score = 137 bits (345), Expect(2) = 2e-55
Identities = 66/94 (70%), Positives = 76/94 (80%)
Frame = +1
Query: 253 DWGTQFASHF*RCMQKELDTQVVLSIAFHPQMDGQSEETIQVLKDILWTCVIDFGGYWD* 432
D G+QF S F R Q+EL T+V LS +FHPQ DGQSE TIQVL+D+L CV+DFGG W+
Sbjct: 1483 DRGSQFTSSFWRAFQEELGTRVHLSTSFHPQTDGQSERTIQVLEDMLRACVMDFGGQWEQ 1542
Query: 433 FLPLVEFAYNNNYHSSIEMAPFEALYGRRCHSLV 534
FLPL EFAYNN+YHSSI+MAPFEALYGRRC S V
Sbjct: 1543 FLPLAEFAYNNSYHSSIQMAPFEALYGRRCRSPV 1576
Score = 106 bits (264), Expect(2) = 2e-55
Identities = 55/104 (52%), Positives = 76/104 (73%), Gaps = 3/104 (2%)
Frame = +3
Query: 537 FDAFKVRP*GTDFLCDSLDKVKLIQERLLRTQSQQKSYVDRKVRALEFIVGEWVLLKVSP 716
F++ + RP GTD L ++LD+V++IQ+RL QS+ +SY D++ R L F VG+ V L+VSP
Sbjct: 1579 FESTEPRPRGTDLLQEALDQVRVIQDRLRTAQSRHQSYADQRRRPLRFSVGDRVFLRVSP 1638
Query: 717 ---VMRFEKRGKLNLRYISPFEIMQHIGEVAYELDLPP*LLDVH 839
VMRF +RGKL+ RYI PFEI++ +GEVAYEL LPP +H
Sbjct: 1639 MKGVMRFGRRGKLSPRYIGPFEILRTVGEVAYELALPPVFSAIH 1682
>gb|AAT39954.1| Putative integrase, identical [Solanum demissum]
Length = 1609
Score = 134 bits (336), Expect(2) = 2e-53
Identities = 65/94 (69%), Positives = 73/94 (77%)
Frame = +1
Query: 253 DWGTQFASHF*RCMQKELDTQVVLSIAFHPQMDGQSEETIQVLKDILWTCVIDFGGYWD* 432
D G+ F S F R Q +L T+V LS FHPQ DGQSE TIQVL+D+L CV+DFGG WD
Sbjct: 1180 DRGSPFTSSFWRTFQDDLGTRVDLSTTFHPQTDGQSERTIQVLEDMLQACVMDFGGQWDQ 1239
Query: 433 FLPLVEFAYNNNYHSSIEMAPFEALYGRRCHSLV 534
FLPL EFAYNNNY+SSI+MAPFEALYGRRC S V
Sbjct: 1240 FLPLAEFAYNNNYYSSIQMAPFEALYGRRCRSPV 1273
Score = 103 bits (256), Expect(2) = 2e-53
Identities = 53/104 (50%), Positives = 74/104 (71%), Gaps = 3/104 (2%)
Frame = +3
Query: 537 FDAFKVRP*GTDFLCDSLDKVKLIQERLLRTQSQQKSYVDRKVRALEFIVGEWVLLKVSP 716
F++ + RP GTD L ++LD+V++IQ+RL QS+ ++Y DR+ R L F VG+ V +VSP
Sbjct: 1276 FESTEARPRGTDLLQEALDQVRVIQDRLRMAQSRHQNYADRRRRPLRFSVGDRVFFRVSP 1335
Query: 717 ---VMRFEKRGKLNLRYISPFEIMQHIGEVAYELDLPP*LLDVH 839
VMRF +R KL+ RYI PFEI++ +GEVAYEL LPP +H
Sbjct: 1336 MKGVMRFGRRDKLSPRYIGPFEILRTVGEVAYELALPPAFSAIH 1379
>gb|AAT38724.1| Putative retrotransposon protein, identical [Solanum demissum]
Length = 1602
Score = 124 bits (312), Expect(2) = 1e-51
Identities = 59/92 (64%), Positives = 70/92 (76%)
Frame = +1
Query: 253 DWGTQFASHF*RCMQKELDTQVVLSIAFHPQMDGQSEETIQVLKDILWTCVIDFGGYWD* 432
D G QF + F + QK L ++V LS AFHPQ DGQ+E TIQ L+D+L CVIDF WD
Sbjct: 1313 DRGAQFTAQFWKSFQKGLGSKVSLSTAFHPQTDGQAERTIQTLEDMLRACVIDFKSNWDD 1372
Query: 433 FLPLVEFAYNNNYHSSIEMAPFEALYGRRCHS 528
LPL+EFAYNN+YHSSI+MAP+EALYGRRC S
Sbjct: 1373 HLPLIEFAYNNSYHSSIQMAPYEALYGRRCRS 1404
Score = 106 bits (264), Expect(2) = 1e-51
Identities = 57/104 (54%), Positives = 73/104 (70%), Gaps = 3/104 (2%)
Frame = +3
Query: 537 FDAFKVRP*GTDFLCDSLDKVKLIQERLLRTQSQQKSYVDRKVRALEFIVGEWVLLKVSP 716
F+ + R G D + +++KVK+IQERL QS+QKSY D + RALEF V +WV LKVSP
Sbjct: 1409 FEVGEARLIGPDLVHQAMEKVKVIQERLKTAQSRQKSYTDVRRRALEFEVDDWVYLKVSP 1468
Query: 717 ---VMRFEKRGKLNLRYISPFEIMQHIGEVAYELDLPP*LLDVH 839
VMRF K+GKL+ RYI P+ I+Q +G VAYEL+LP L VH
Sbjct: 1469 MKGVMRFGKKGKLSPRYIGPYRIVQRVGSVAYELELPQELAAVH 1512
>ref|XP_006364939.1| PREDICTED: uncharacterized protein LOC102581051 [Solanum tuberosum]
Length = 1946
Score = 125 bits (315), Expect(2) = 5e-51
Identities = 60/96 (62%), Positives = 73/96 (76%)
Frame = +1
Query: 253 DWGTQFASHF*RCMQKELDTQVVLSIAFHPQMDGQSEETIQVLKDILWTCVIDFGGYWD* 432
D GTQF SHF + Q+ L T+V L+ AFHPQ DGQ+E TIQ L+D+L CV++ G W+
Sbjct: 1658 DRGTQFTSHFWKSFQRGLGTRVKLTTAFHPQTDGQAERTIQTLEDMLRACVLELKGSWED 1717
Query: 433 FLPLVEFAYNNNYHSSIEMAPFEALYGRRCHSLVCL 540
LPL+EF+YNN+YHSSI MAPFEALYGRRC S V L
Sbjct: 1718 HLPLIEFSYNNSYHSSIGMAPFEALYGRRCRSSVGL 1753
Score = 102 bits (255), Expect(2) = 5e-51
Identities = 53/105 (50%), Positives = 78/105 (74%), Gaps = 3/105 (2%)
Frame = +3
Query: 534 LFDAFKVRP*GTDFLCDSLDKVKLIQERLLRTQSQQKSYVDRKVRALEFIVGEWVLLKVS 713
LF+ +V G D + ++L++V++I+ERL QS++KSY D + RALEF VG+WV LKVS
Sbjct: 1753 LFEVGEVALLGPDLVMEALEEVRMIRERLKMAQSRRKSYADVRRRALEFRVGDWVYLKVS 1812
Query: 714 P---VMRFEKRGKLNLRYISPFEIMQHIGEVAYELDLPP*LLDVH 839
P V+RF K+GKL+ RY+ P+++M+ IG+VAYEL+LP + VH
Sbjct: 1813 PMKGVVRFGKKGKLSPRYVGPYKVMRRIGKVAYELELPSEMDLVH 1857
>gb|AAT38744.1| Putative gag-pol polyprotein, identical [Solanum demissum]
Length = 1515
Score = 124 bits (312), Expect(2) = 9e-51
Identities = 59/92 (64%), Positives = 70/92 (76%)
Frame = +1
Query: 253 DWGTQFASHF*RCMQKELDTQVVLSIAFHPQMDGQSEETIQVLKDILWTCVIDFGGYWD* 432
D G QF + F + QK L ++V LS AFHPQ DGQ+E TIQ L+D+L CVIDF WD
Sbjct: 1307 DRGAQFTAQFWKSFQKGLGSKVSLSTAFHPQTDGQAERTIQTLEDMLRACVIDFKSNWDD 1366
Query: 433 FLPLVEFAYNNNYHSSIEMAPFEALYGRRCHS 528
LPL+EFAYNN+YHSSI+MAP+EALYGRRC S
Sbjct: 1367 HLPLIEFAYNNSYHSSIQMAPYEALYGRRCRS 1398
Score = 103 bits (256), Expect(2) = 9e-51
Identities = 54/97 (55%), Positives = 70/97 (72%), Gaps = 3/97 (3%)
Frame = +3
Query: 537 FDAFKVRP*GTDFLCDSLDKVKLIQERLLRTQSQQKSYVDRKVRALEFIVGEWVLLKVSP 716
F+ + R G D + +++KVK+IQERL QS+QKSY D + RALEF V +WV LKVSP
Sbjct: 1403 FEVGEARLIGPDLVHQAMEKVKVIQERLKTAQSRQKSYTDVRRRALEFEVDDWVYLKVSP 1462
Query: 717 ---VMRFEKRGKLNLRYISPFEIMQHIGEVAYELDLP 818
VMRF K+GKL+ RYI P+ I+Q +G VAYEL+LP
Sbjct: 1463 MKGVMRFGKKGKLSPRYIGPYRIVQRVGSVAYELELP 1499
>gb|AAT39297.2| Gag-pol protein, putative [Solanum demissum]
Length = 1554
Score = 119 bits (297), Expect(2) = 6e-49
Identities = 57/92 (61%), Positives = 69/92 (75%)
Frame = +1
Query: 253 DWGTQFASHF*RCMQKELDTQVVLSIAFHPQMDGQSEETIQVLKDILWTCVIDFGGYWD* 432
D G QF + F + +K L ++V LS AF+PQ DGQ+E TI L+D+L CVIDF G WD
Sbjct: 1313 DRGAQFTAQFWKSFKKGLGSKVNLSTAFYPQTDGQAERTIHTLEDMLRACVIDFKGNWDD 1372
Query: 433 FLPLVEFAYNNNYHSSIEMAPFEALYGRRCHS 528
LPL+EFAYNN+YHSSI MAP+EALYGRRC S
Sbjct: 1373 HLPLIEFAYNNSYHSSIHMAPYEALYGRRCIS 1404
Score = 102 bits (255), Expect(2) = 6e-49
Identities = 54/95 (56%), Positives = 69/95 (72%), Gaps = 3/95 (3%)
Frame = +3
Query: 564 GTDFLCDSLDKVKLIQERLLRTQSQQKSYVDRKVRALEFIVGEWVLLKVSP---VMRFEK 734
G D + +++KVK+IQERL QS+QKSY+D + RALEF V +WV LKVSP VMRF K
Sbjct: 1418 GPDLVHQAMEKVKVIQERLKTAQSRQKSYIDVRTRALEFEVDDWVYLKVSPMKGVMRFGK 1477
Query: 735 RGKLNLRYISPFEIMQHIGEVAYELDLPP*LLDVH 839
+GKL+ +YI P+ I + IG VAYEL+LP L VH
Sbjct: 1478 KGKLSPQYIGPYRIAKRIGNVAYELELPQELEAVH 1512
>ref|XP_004506381.1| PREDICTED: enzymatic polyprotein-like [Cicer arietinum]
Length = 690
Score = 116 bits (291), Expect(2) = 5e-48
Identities = 54/78 (69%), Positives = 63/78 (80%)
Frame = +1
Query: 295 QKELDTQVVLSIAFHPQMDGQSEETIQVLKDILWTCVIDFGGYWD*FLPLVEFAYNNNYH 474
Q L T++ LS AFHPQ+DGQSE TIQ+L+D+L CV+D GG WD LPL+EFAYNN Y
Sbjct: 422 QTSLGTRLKLSTAFHPQIDGQSERTIQILEDMLRACVLDLGGSWDQHLPLMEFAYNNTYQ 481
Query: 475 SSIEMAPFEALYGRRCHS 528
SSI+MAPFEALYGRRC S
Sbjct: 482 SSIQMAPFEALYGRRCRS 499
Score = 102 bits (253), Expect(2) = 5e-48
Identities = 52/104 (50%), Positives = 75/104 (72%), Gaps = 3/104 (2%)
Frame = +3
Query: 537 FDAFKVRP*GTDFLCDSLDKVKLIQERLLRTQSQQKSYVDRKVRALEFIVGEWVLLKVSP 716
F+ + + G + + D+++KVKLI++RL+ QS+QKSY D++ R LEF VGE V L+VSP
Sbjct: 504 FEVREAKLVGPELIQDAIEKVKLIRDRLVTAQSRQKSYSDKRRRPLEFSVGEHVFLRVSP 563
Query: 717 ---VMRFEKRGKLNLRYISPFEIMQHIGEVAYELDLPP*LLDVH 839
V+RF K+GKL+ R+I PFE+++ +G VAY L LPP L VH
Sbjct: 564 MKGVLRFGKKGKLSPRFIGPFEVLERVGPVAYRLALPPDLSGVH 607
>gb|EOY08659.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 937
Score = 117 bits (292), Expect(2) = 7e-48
Identities = 57/92 (61%), Positives = 69/92 (75%)
Frame = +1
Query: 253 DWGTQFASHF*RCMQKELDTQVVLSIAFHPQMDGQSEETIQVLKDILWTCVIDFGGYWD* 432
D G QF S F +Q+ L T++ S AFHPQ DGQSE TIQ L+D+L CVID G W+
Sbjct: 625 DRGAQFTSRFWGKLQEALGTKLDFSTAFHPQTDGQSEWTIQTLEDMLRACVIDLGVRWEQ 684
Query: 433 FLPLVEFAYNNNYHSSIEMAPFEALYGRRCHS 528
+LPLVEFAYNN++ +SI+MAPFEALYGRRC S
Sbjct: 685 YLPLVEFAYNNSFQTSIQMAPFEALYGRRCRS 716
Score = 101 bits (251), Expect(2) = 7e-48
Identities = 51/95 (53%), Positives = 70/95 (73%), Gaps = 3/95 (3%)
Frame = +3
Query: 564 GTDFLCDSLDKVKLIQERLLRTQSQQKSYVDRKVRALEFIVGEWVLLKVSP---VMRFEK 734
G +F+ D+ +K+ +I++R+L QS+QKSY D + R LEF VG+ V LKVSP VMRF K
Sbjct: 730 GPEFVQDATEKIHMIRQRMLTAQSRQKSYADNRRRDLEFQVGDHVFLKVSPTKGVMRFGK 789
Query: 735 RGKLNLRYISPFEIMQHIGEVAYELDLPP*LLDVH 839
+GKL+ RYI PFEI++ +G VAY L LPP L ++H
Sbjct: 790 KGKLSPRYIGPFEILEKVGVVAYRLALPPDLSNIH 824
>gb|EOY21678.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 448
Score = 118 bits (295), Expect(2) = 2e-47
Identities = 57/92 (61%), Positives = 69/92 (75%)
Frame = +1
Query: 253 DWGTQFASHF*RCMQKELDTQVVLSIAFHPQMDGQSEETIQVLKDILWTCVIDFGGYWD* 432
D G QF S F +Q+ L T++ S AFHPQ DGQSE TIQ L+D+L CVID G W+
Sbjct: 164 DRGAQFTSRFWGKLQEALGTKLDFSTAFHPQTDGQSERTIQTLEDMLRACVIDLGVRWEQ 223
Query: 433 FLPLVEFAYNNNYHSSIEMAPFEALYGRRCHS 528
+LPLVEFAYNN++ +SI+MAPFEALYGRRC S
Sbjct: 224 YLPLVEFAYNNSFQTSIQMAPFEALYGRRCRS 255
Score = 99.0 bits (245), Expect(2) = 2e-47
Identities = 49/95 (51%), Positives = 69/95 (72%), Gaps = 3/95 (3%)
Frame = +3
Query: 564 GTDFLCDSLDKVKLIQERLLRTQSQQKSYVDRKVRALEFIVGEWVLLKVSP---VMRFEK 734
G + + D+ +K+ +I++R+L QS+QKSY D + R LEF VG+ V LKVSP +MRF K
Sbjct: 269 GPELVQDATEKIHMIRQRMLTAQSRQKSYADNRRRYLEFQVGDHVFLKVSPTKGIMRFGK 328
Query: 735 RGKLNLRYISPFEIMQHIGEVAYELDLPP*LLDVH 839
+GKL+ RYI PFEI++ +G VAY L LPP L ++H
Sbjct: 329 KGKLSPRYIGPFEILEKVGAVAYRLALPPDLSNIH 363
>gb|ABI34354.1| Retrotransposon gag protein [Solanum demissum]
Length = 4543
Score = 114 bits (286), Expect(2) = 3e-47
Identities = 53/77 (68%), Positives = 63/77 (81%)
Frame = +1
Query: 298 KELDTQVVLSIAFHPQMDGQSEETIQVLKDILWTCVIDFGGYWD*FLPLVEFAYNNNYHS 477
K L ++V LS AFHPQ DGQ+E TIQ+L+D+L CVIDF G WD LPL+EFAYNN+YH
Sbjct: 1077 KGLGSKVNLSTAFHPQTDGQAEHTIQILEDMLRACVIDFKGNWDDHLPLIEFAYNNSYHP 1136
Query: 478 SIEMAPFEALYGRRCHS 528
SI+MAP+EALYGRRC S
Sbjct: 1137 SIQMAPYEALYGRRCRS 1153
Score = 114 bits (286), Expect(2) = 3e-47
Identities = 53/77 (68%), Positives = 63/77 (81%)
Frame = +1
Query: 298 KELDTQVVLSIAFHPQMDGQSEETIQVLKDILWTCVIDFGGYWD*FLPLVEFAYNNNYHS 477
K L ++V LS AFHPQ DGQ+E TIQ+L+D+L CVIDF G WD LPL+EFAYNN+YH
Sbjct: 2587 KGLGSKVNLSTAFHPQTDGQAEHTIQILEDMLRACVIDFKGNWDDHLPLIEFAYNNSYHP 2646
Query: 478 SIEMAPFEALYGRRCHS 528
SI+MAP+EALYGRRC S
Sbjct: 2647 SIQMAPYEALYGRRCRS 2663
Score = 114 bits (286), Expect(2) = 3e-47
Identities = 53/77 (68%), Positives = 63/77 (81%)
Frame = +1
Query: 298 KELDTQVVLSIAFHPQMDGQSEETIQVLKDILWTCVIDFGGYWD*FLPLVEFAYNNNYHS 477
K L ++V LS AFHPQ DGQ+E TIQ+L+D+L CVIDF G WD LPL+EFAYNN+YH
Sbjct: 4097 KGLGSKVNLSTAFHPQTDGQAEHTIQILEDMLRACVIDFKGNWDDHLPLIEFAYNNSYHP 4156
Query: 478 SIEMAPFEALYGRRCHS 528
SI+MAP+EALYGRRC S
Sbjct: 4157 SIQMAPYEALYGRRCRS 4173
Score = 101 bits (251), Expect(2) = 3e-47
Identities = 54/95 (56%), Positives = 68/95 (71%), Gaps = 3/95 (3%)
Frame = +3
Query: 564 GTDFLCDSLDKVKLIQERLLRTQSQQKSYVDRKVRALEFIVGEWVLLKVSP---VMRFEK 734
G D + +++KVK+I+ERL QS+QKSY D + RALEF V +WV LKVSP VMRF K
Sbjct: 1167 GPDLVHQAMEKVKVIKERLKTAQSRQKSYTDVRRRALEFEVDDWVYLKVSPMKGVMRFGK 1226
Query: 735 RGKLNLRYISPFEIMQHIGEVAYELDLPP*LLDVH 839
+GKL+ RYI P+ I + IG VAYEL+LP L VH
Sbjct: 1227 KGKLSPRYIGPYRIAKRIGNVAYELELPQELAAVH 1261
Score = 101 bits (251), Expect(2) = 3e-47
Identities = 54/95 (56%), Positives = 68/95 (71%), Gaps = 3/95 (3%)
Frame = +3
Query: 564 GTDFLCDSLDKVKLIQERLLRTQSQQKSYVDRKVRALEFIVGEWVLLKVSP---VMRFEK 734
G D + +++KVK+I+ERL QS+QKSY D + RALEF V +WV LKVSP VMRF K
Sbjct: 2677 GPDLVHQAMEKVKVIKERLKTAQSRQKSYTDVRRRALEFEVDDWVYLKVSPMKGVMRFGK 2736
Query: 735 RGKLNLRYISPFEIMQHIGEVAYELDLPP*LLDVH 839
+GKL+ RYI P+ I + IG VAYEL+LP L VH
Sbjct: 2737 KGKLSPRYIGPYRIAKRIGNVAYELELPQELAAVH 2771
Score = 101 bits (251), Expect(2) = 3e-47
Identities = 54/95 (56%), Positives = 68/95 (71%), Gaps = 3/95 (3%)
Frame = +3
Query: 564 GTDFLCDSLDKVKLIQERLLRTQSQQKSYVDRKVRALEFIVGEWVLLKVSP---VMRFEK 734
G D + +++KVK+I+ERL QS+QKSY D + RALEF V +WV LKVSP VMRF K
Sbjct: 4187 GPDLVHQAMEKVKVIKERLKTAQSRQKSYTDVRRRALEFEVDDWVYLKVSPMKGVMRFGK 4246
Query: 735 RGKLNLRYISPFEIMQHIGEVAYELDLPP*LLDVH 839
+GKL+ RYI P+ I + IG VAYEL+LP L VH
Sbjct: 4247 KGKLSPRYIGPYRIAKRIGNVAYELELPQELAAVH 4281
>gb|EOX99963.1| Uncharacterized protein TCM_009073 [Theobroma cacao]
Length = 421
Score = 116 bits (291), Expect(2) = 3e-47
Identities = 56/92 (60%), Positives = 69/92 (75%)
Frame = +1
Query: 253 DWGTQFASHF*RCMQKELDTQVVLSIAFHPQMDGQSEETIQVLKDILWTCVIDFGGYWD* 432
D G QF S F +Q+ L T++ S AFHPQ DGQSE TIQ L+D+L CVID G W+
Sbjct: 123 DRGAQFTSRFWGKLQEALGTKLDFSTAFHPQTDGQSERTIQTLEDMLRACVIDLGVRWEQ 182
Query: 433 FLPLVEFAYNNNYHSSIEMAPFEALYGRRCHS 528
+LPLVEFAYNN++ +SI+MAPF+ALYGRRC S
Sbjct: 183 YLPLVEFAYNNSFQTSIQMAPFKALYGRRCRS 214
Score = 99.4 bits (246), Expect(2) = 3e-47
Identities = 50/95 (52%), Positives = 69/95 (72%), Gaps = 3/95 (3%)
Frame = +3
Query: 564 GTDFLCDSLDKVKLIQERLLRTQSQQKSYVDRKVRALEFIVGEWVLLKVSP---VMRFEK 734
G + + D+ +K+ +I++R+L QS+QKSY D + R LEF VG+ V LKVSP VMRF K
Sbjct: 228 GPELVQDATEKIHIIRQRMLTAQSRQKSYADNRRRDLEFQVGDHVFLKVSPTKGVMRFGK 287
Query: 735 RGKLNLRYISPFEIMQHIGEVAYELDLPP*LLDVH 839
+GKL+ RYI PFEI++ +G VAY L LPP L ++H
Sbjct: 288 KGKLSPRYIGPFEILEKVGAVAYRLALPPDLSNIH 322
>ref|XP_006356454.1| PREDICTED: uncharacterized protein LOC102599406 [Solanum tuberosum]
Length = 859
Score = 128 bits (322), Expect(2) = 6e-47
Identities = 63/94 (67%), Positives = 70/94 (74%)
Frame = +1
Query: 253 DWGTQFASHF*RCMQKELDTQVVLSIAFHPQMDGQSEETIQVLKDILWTCVIDFGGYWD* 432
D G F S F R Q EL T+V L FHPQ DGQSE TI+VL+D+L CV+DFGG WD
Sbjct: 539 DRGPHFTSSFWRTFQDELGTRVDLCTTFHPQTDGQSERTIKVLEDMLRACVMDFGGQWDQ 598
Query: 433 FLPLVEFAYNNNYHSSIEMAPFEALYGRRCHSLV 534
LPL EFAYNN+YHSSI+MAPFEALYGRRC S V
Sbjct: 599 HLPLAEFAYNNSYHSSIQMAPFEALYGRRCRSPV 632
Score = 86.7 bits (213), Expect(2) = 6e-47
Identities = 45/90 (50%), Positives = 65/90 (72%), Gaps = 3/90 (3%)
Frame = +3
Query: 537 FDAFKVRP*GTDFLCDSLDKVKLIQERLLRTQSQQKSYVDRKVRALEFIVGEWVLLKVSP 716
F++ K RP GTD + ++LD V++IQ+RL QS+ +SY +R+ R L+F VG V L+VSP
Sbjct: 635 FESTKRRPRGTDLMREALDHVRVIQDRLRTAQSRHQSYANRRRRPLKFAVGNRVFLRVSP 694
Query: 717 ---VMRFEKRGKLNLRYISPFEIMQHIGEV 797
V+RF +RGKL+ RYI PFEI++ + EV
Sbjct: 695 MKGVIRFGRRGKLSARYIGPFEILRTVREV 724
>gb|EOY08667.1| Retrotransposon protein, Ty3-gypsy subclass, putative [Theobroma
cacao]
Length = 521
Score = 118 bits (295), Expect(2) = 8e-47
Identities = 57/92 (61%), Positives = 69/92 (75%)
Frame = +1
Query: 253 DWGTQFASHF*RCMQKELDTQVVLSIAFHPQMDGQSEETIQVLKDILWTCVIDFGGYWD* 432
D G QF S F +Q+ L T++ S AFHPQ DGQSE TIQ L+D+L CVID G W+
Sbjct: 237 DRGAQFTSRFWGKLQEALGTKLDFSTAFHPQTDGQSERTIQTLEDMLRACVIDLGVRWEQ 296
Query: 433 FLPLVEFAYNNNYHSSIEMAPFEALYGRRCHS 528
+LPLVEFAYNN++ +SI+MAPFEALYGRRC S
Sbjct: 297 YLPLVEFAYNNSFQTSIQMAPFEALYGRRCRS 328
Score = 96.7 bits (239), Expect(2) = 8e-47
Identities = 49/95 (51%), Positives = 67/95 (70%), Gaps = 3/95 (3%)
Frame = +3
Query: 564 GTDFLCDSLDKVKLIQERLLRTQSQQKSYVDRKVRALEFIVGEWVLLKVSP---VMRFEK 734
G + + D+ +K+ +I++R+L QS+ KSY D + R LEF VG+ V LKVSP VMRF K
Sbjct: 342 GPELVQDATEKIHMIRQRMLTAQSRHKSYADNRRRDLEFQVGDHVFLKVSPTKGVMRFGK 401
Query: 735 RGKLNLRYISPFEIMQHIGEVAYELDLPP*LLDVH 839
+GKL+ RYI PFEI+ +G VAY L LPP L ++H
Sbjct: 402 KGKLSPRYIGPFEILDKVGTVAYRLALPPDLSNIH 436
>gb|EOY03326.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 1447
Score = 115 bits (287), Expect(2) = 1e-46
Identities = 56/92 (60%), Positives = 68/92 (73%)
Frame = +1
Query: 253 DWGTQFASHF*RCMQKELDTQVVLSIAFHPQMDGQSEETIQVLKDILWTCVIDFGGYWD* 432
D G QF S F +Q+ L T++ S AFHPQ DGQSE TIQ L+ +L CVID G W+
Sbjct: 1163 DRGAQFTSRFWGKLQEALGTKLDFSTAFHPQTDGQSERTIQTLEAMLRACVIDLGVRWEQ 1222
Query: 433 FLPLVEFAYNNNYHSSIEMAPFEALYGRRCHS 528
+LPLVEFAYNN++ +SI+MAPFEALYGRRC S
Sbjct: 1223 YLPLVEFAYNNSFQTSIQMAPFEALYGRRCRS 1254
Score = 99.4 bits (246), Expect(2) = 1e-46
Identities = 50/95 (52%), Positives = 69/95 (72%), Gaps = 3/95 (3%)
Frame = +3
Query: 564 GTDFLCDSLDKVKLIQERLLRTQSQQKSYVDRKVRALEFIVGEWVLLKVSP---VMRFEK 734
G + + D+ +K+ +I++R+L QS+QKSY D + R LEF VG+ V LKVSP VMRF K
Sbjct: 1268 GPELVQDATEKIHMIRQRMLTAQSRQKSYADNRRRDLEFQVGDHVFLKVSPTKGVMRFGK 1327
Query: 735 RGKLNLRYISPFEIMQHIGEVAYELDLPP*LLDVH 839
+GKL+ RYI PFEI++ +G VAY L LPP L ++H
Sbjct: 1328 KGKLSPRYIGPFEILEKVGAVAYRLALPPDLSNIH 1362
>gb|EOY26451.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 679
Score = 118 bits (295), Expect(2) = 1e-46
Identities = 57/92 (61%), Positives = 69/92 (75%)
Frame = +1
Query: 253 DWGTQFASHF*RCMQKELDTQVVLSIAFHPQMDGQSEETIQVLKDILWTCVIDFGGYWD* 432
D G QF S F +Q+ L T++ S AFHPQ DGQSE TIQ L+D+L CVID G W+
Sbjct: 395 DRGAQFTSRFWGKLQEALGTKLDFSTAFHPQTDGQSERTIQTLEDMLRACVIDLGVRWEQ 454
Query: 433 FLPLVEFAYNNNYHSSIEMAPFEALYGRRCHS 528
+LPLVEFAYNN++ +SI+MAPFEALYGRRC S
Sbjct: 455 YLPLVEFAYNNSFQTSIQMAPFEALYGRRCRS 486
Score = 95.9 bits (237), Expect(2) = 1e-46
Identities = 48/95 (50%), Positives = 68/95 (71%), Gaps = 3/95 (3%)
Frame = +3
Query: 564 GTDFLCDSLDKVKLIQERLLRTQSQQKSYVDRKVRALEFIVGEWVLLKVSP---VMRFEK 734
G + + D+ +K+ +I++R+L QS+QKSY D + R LEF VG+ V LK SP VMRF K
Sbjct: 500 GPELVQDATEKIHMIRQRMLTAQSRQKSYADNRRRDLEFQVGDHVFLKFSPTKGVMRFGK 559
Query: 735 RGKLNLRYISPFEIMQHIGEVAYELDLPP*LLDVH 839
+GKL+ RYI PF+I++ +G VAY L LPP L ++H
Sbjct: 560 KGKLSPRYIGPFKILEKVGAVAYRLALPPDLSNIH 594
>gb|EOY20280.1| Uncharacterized protein TCM_045699 [Theobroma cacao]
Length = 415
Score = 115 bits (287), Expect(2) = 2e-46
Identities = 56/92 (60%), Positives = 68/92 (73%)
Frame = +1
Query: 253 DWGTQFASHF*RCMQKELDTQVVLSIAFHPQMDGQSEETIQVLKDILWTCVIDFGGYWD* 432
D QF S F +Q+ L T++ S AFHPQ DGQSE TIQ L+D+L CVID G W+
Sbjct: 131 DREAQFTSRFWGKLQEALGTKLDFSTAFHPQTDGQSERTIQTLEDMLRACVIDLGVKWEQ 190
Query: 433 FLPLVEFAYNNNYHSSIEMAPFEALYGRRCHS 528
+LPLVEFAYNN++ +SI+MAPFEALYGRRC S
Sbjct: 191 YLPLVEFAYNNSFQTSIQMAPFEALYGRRCRS 222
Score = 98.6 bits (244), Expect(2) = 2e-46
Identities = 49/95 (51%), Positives = 70/95 (73%), Gaps = 3/95 (3%)
Frame = +3
Query: 564 GTDFLCDSLDKVKLIQERLLRTQSQQKSYVDRKVRALEFIVGEWVLLKVSP---VMRFEK 734
G + + D+ +K+ +I++++L TQS+QKSY D + R LEF VG+ V LKVSP VMRF K
Sbjct: 236 GPELVQDATEKIHMIRQKMLTTQSRQKSYADNRRRDLEFQVGDHVFLKVSPTKGVMRFGK 295
Query: 735 RGKLNLRYISPFEIMQHIGEVAYELDLPP*LLDVH 839
+GKL+ RYI PF+I++ +G VAY L LPP L ++H
Sbjct: 296 KGKLSPRYIRPFDILEKVGAVAYRLALPPDLSNIH 330
>gb|EOY20275.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 562
Score = 115 bits (287), Expect(2) = 3e-46
Identities = 56/92 (60%), Positives = 68/92 (73%)
Frame = +1
Query: 253 DWGTQFASHF*RCMQKELDTQVVLSIAFHPQMDGQSEETIQVLKDILWTCVIDFGGYWD* 432
D QF S F +Q+ L T++ S AFHPQ DGQSE TIQ L+D+L CVID G W+
Sbjct: 344 DREAQFTSRFWGKLQEALGTKLDFSTAFHPQTDGQSERTIQTLEDMLRACVIDLGVRWEQ 403
Query: 433 FLPLVEFAYNNNYHSSIEMAPFEALYGRRCHS 528
+LPLVEFAYNN++ +SI+MAPFEALYGRRC S
Sbjct: 404 YLPLVEFAYNNSFQTSIQMAPFEALYGRRCRS 435
Score = 97.8 bits (242), Expect(2) = 3e-46
Identities = 49/95 (51%), Positives = 68/95 (71%), Gaps = 3/95 (3%)
Frame = +3
Query: 564 GTDFLCDSLDKVKLIQERLLRTQSQQKSYVDRKVRALEFIVGEWVLLKVSP---VMRFEK 734
G + + D+ +K+ +I +++L QS+QKSY D + R LEF VG+ V LKVSP VMRF K
Sbjct: 449 GPELVQDATEKIHMISQKMLTAQSRQKSYADNRRRDLEFQVGDHVFLKVSPTKGVMRFGK 508
Query: 735 RGKLNLRYISPFEIMQHIGEVAYELDLPP*LLDVH 839
+GKL+ RYI PFEI++ +G VAY L LPP L ++H
Sbjct: 509 KGKLSPRYIGPFEILEKVGAVAYRLALPPDLSNIH 543