BLASTX nr result
ID: Atropa21_contig00032960
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00032960
(532 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006363692.1| PREDICTED: threonine dehydratase biosyntheti... 124 1e-26
ref|XP_006339100.1| PREDICTED: threonine dehydratase biosyntheti... 99 8e-19
ref|NP_001234234.1| chloroplast threonine deaminase 1 precursor ... 96 4e-18
gb|EPS59945.1| chloroplast threonine deaminase 1, partial [Genli... 78 1e-12
ref|XP_006339313.1| PREDICTED: threonine dehydratase biosyntheti... 72 6e-11
ref|XP_004249785.1| PREDICTED: threonine dehydratase biosyntheti... 69 9e-10
ref|XP_004143291.1| PREDICTED: threonine dehydratase biosyntheti... 68 1e-09
ref|XP_004156263.1| PREDICTED: threonine dehydratase biosyntheti... 67 2e-09
gb|AAG59585.1|AF229927_1 threonine deaminase [Nicotiana attenuat... 66 4e-09
gb|ESW17270.1| hypothetical protein PHAVU_007G225400g [Phaseolus... 62 8e-08
ref|XP_004981992.1| PREDICTED: threonine dehydratase biosyntheti... 62 8e-08
ref|XP_002528625.1| threonine dehydratase/deaminase, putative [R... 62 1e-07
ref|XP_006366786.1| PREDICTED: threonine dehydratase biosyntheti... 61 2e-07
ref|XP_004497558.1| PREDICTED: threonine dehydratase biosyntheti... 61 2e-07
ref|XP_002466574.1| hypothetical protein SORBIDRAFT_01g010250 [S... 61 2e-07
ref|XP_004246590.1| PREDICTED: threonine dehydratase biosyntheti... 60 2e-07
ref|XP_006650494.1| PREDICTED: threonine dehydratase biosyntheti... 60 2e-07
gb|AAA34171.1| threonine deaminase, partial [Solanum lycopersicum] 60 2e-07
gb|AFW67825.1| hypothetical protein ZEAMMB73_108837 [Zea mays] 60 2e-07
pdb|3IAU|A Chain A, The Structure Of The Processed Form Of Threo... 60 2e-07
>ref|XP_006363692.1| PREDICTED: threonine dehydratase biosynthetic, chloroplastic-like
[Solanum tuberosum]
Length = 572
Score = 124 bits (311), Expect = 1e-26
Identities = 70/123 (56%), Positives = 77/123 (62%), Gaps = 7/123 (5%)
Frame = +3
Query: 129 MAGLITFVHSTATSLFSRPNFSGEPDPLLPAATPI---DPLKXXXXXXXXXXXXXXXRCE 299
MA TFV T TS FSRPNF + + + + K RC+
Sbjct: 1 MASPFTFVPLTITSRFSRPNFPARTTAINTCSDTVKIANNSKTFLISPLPVASLNSLRCD 60
Query: 300 PGYLIPNHPVEGNGGDSGFQYLIDILGTRVYDVAQESPLQ----LSQKLGVNVWLKGEDL 467
PGYLIPN+PV GNGGDSGFQYLI+ILG RVYDVA ESPLQ LSQKLGVNVWLK EDL
Sbjct: 61 PGYLIPNYPVGGNGGDSGFQYLINILGARVYDVAHESPLQLAPKLSQKLGVNVWLKREDL 120
Query: 468 QPV 476
QPV
Sbjct: 121 QPV 123
>ref|XP_006339100.1| PREDICTED: threonine dehydratase biosynthetic, chloroplastic-like
[Solanum tuberosum]
Length = 609
Score = 98.6 bits (244), Expect = 8e-19
Identities = 55/114 (48%), Positives = 68/114 (59%), Gaps = 4/114 (3%)
Frame = +3
Query: 147 FVHSTATSLFSRPNFSGEPDPLLPAATPIDPLKXXXXXXXXXXXXXXXRCEPGYLIPNHP 326
F+ + AT + S P EP P P P+ +CEPGYLIPN P
Sbjct: 46 FIRAKATEILSSPATVTEPLKAEPVEAPEAPVPLLRVSPSSL------QCEPGYLIPNTP 99
Query: 327 VEGNGGDSGFQYLIDILGTRVYDVAQESPLQ----LSQKLGVNVWLKGEDLQPV 476
V G GG SG++YL +IL ++VYDVA E+PLQ LS++LGVNVWLK EDLQPV
Sbjct: 100 VLGTGGVSGYEYLTNILSSKVYDVAYETPLQKAPKLSERLGVNVWLKREDLQPV 153
>ref|NP_001234234.1| chloroplast threonine deaminase 1 precursor [Solanum lycopersicum]
gi|116733975|gb|ABK20067.1| chloroplast threonine
deaminase 1 precursor [Solanum lycopersicum]
Length = 606
Score = 96.3 bits (238), Expect = 4e-18
Identities = 53/109 (48%), Positives = 67/109 (61%), Gaps = 4/109 (3%)
Frame = +3
Query: 162 ATSLFSRPNFSGEPDPLLPAATPIDPLKXXXXXXXXXXXXXXXRCEPGYLIPNHPVEGNG 341
AT + S P EP PA P+ L+ +CEPGYL+PN PV G G
Sbjct: 51 ATEILSSPATVTEPLKAEPAEAPVPLLRVSPSSL---------QCEPGYLLPNSPVLGTG 101
Query: 342 GDSGFQYLIDILGTRVYDVAQESPLQ----LSQKLGVNVWLKGEDLQPV 476
G +G++YL +IL ++VYDVA E+PLQ LS++LGVNVWLK EDLQPV
Sbjct: 102 GVTGYEYLTNILSSKVYDVAYETPLQKAPKLSERLGVNVWLKREDLQPV 150
>gb|EPS59945.1| chloroplast threonine deaminase 1, partial [Genlisea aurea]
Length = 432
Score = 78.2 bits (191), Expect = 1e-12
Identities = 41/70 (58%), Positives = 51/70 (72%), Gaps = 8/70 (11%)
Frame = +3
Query: 291 RCEPGYLIPN----HPVEGNGGDSGFQYLIDILGTRVYDVAQESPLQLSQKL----GVNV 446
+CE GYL+PN + + G+G S QYL +ILG++VYD+A ESPLQL+ KL GVNV
Sbjct: 55 QCESGYLVPNKNMGYGISGDGTLSPMQYLTNILGSKVYDLAYESPLQLASKLSGSWGVNV 114
Query: 447 WLKGEDLQPV 476
WLK EDLQPV
Sbjct: 115 WLKREDLQPV 124
>ref|XP_006339313.1| PREDICTED: threonine dehydratase biosynthetic, chloroplastic-like
[Solanum tuberosum]
Length = 591
Score = 72.4 bits (176), Expect = 6e-11
Identities = 35/66 (53%), Positives = 50/66 (75%), Gaps = 4/66 (6%)
Frame = +3
Query: 291 RCEPGYLIPNHPVEGNGGDSGFQYLIDILGTRVYDVAQESPLQ----LSQKLGVNVWLKG 458
+CE GYL+PN+P G+ G+ Y+ +IL ++VY++A+E+PLQ LS++LGVNVWLK
Sbjct: 74 QCEEGYLLPNYP----RGEIGYNYVKEILTSKVYELAEETPLQRAHKLSERLGVNVWLKR 129
Query: 459 EDLQPV 476
EDL PV
Sbjct: 130 EDLHPV 135
>ref|XP_004249785.1| PREDICTED: threonine dehydratase biosynthetic, chloroplastic-like
[Solanum lycopersicum]
Length = 592
Score = 68.6 bits (166), Expect = 9e-10
Identities = 33/66 (50%), Positives = 49/66 (74%), Gaps = 4/66 (6%)
Frame = +3
Query: 291 RCEPGYLIPNHPVEGNGGDSGFQYLIDILGTRVYDVAQESPLQ----LSQKLGVNVWLKG 458
+CE G+L+PN+P G+ G+ Y+ +IL ++VY++A+E+PLQ LS++LGV VWLK
Sbjct: 75 QCEEGFLLPNYP----RGEIGYNYVKEILTSKVYELAEETPLQRAHKLSERLGVTVWLKR 130
Query: 459 EDLQPV 476
EDL PV
Sbjct: 131 EDLHPV 136
>ref|XP_004143291.1| PREDICTED: threonine dehydratase biosynthetic, chloroplastic-like
[Cucumis sativus]
Length = 630
Score = 68.2 bits (165), Expect = 1e-09
Identities = 42/92 (45%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Frame = +3
Query: 225 TPIDPLKXXXXXXXXXXXXXXXRCEPGYL--IPNHPVEGNGGDS--GFQYLIDILGTRVY 392
TP D L + PGYL +P+ NG DS +YL ILG++VY
Sbjct: 72 TPADALAPTPLPPRKRVSADSLQFPPGYLGAVPDRSGSDNGEDSVDAMEYLTRILGSKVY 131
Query: 393 DVAQESPLQ----LSQKLGVNVWLKGEDLQPV 476
DVA ESPLQ LS++ GVN+WLK EDLQPV
Sbjct: 132 DVAIESPLQLAPTLSERFGVNIWLKREDLQPV 163
>ref|XP_004156263.1| PREDICTED: threonine dehydratase biosynthetic, chloroplastic-like
[Cucumis sativus]
Length = 630
Score = 67.4 bits (163), Expect = 2e-09
Identities = 38/67 (56%), Positives = 46/67 (68%), Gaps = 8/67 (11%)
Frame = +3
Query: 300 PGYL--IPNHPVEGNGGDS--GFQYLIDILGTRVYDVAQESPLQ----LSQKLGVNVWLK 455
PGYL +P+ NG DS +YL ILG++VYDVA ESPLQ LS++ GVN+WLK
Sbjct: 97 PGYLGAVPDRSGSDNGEDSVDAMEYLTRILGSKVYDVAIESPLQLAPTLSERFGVNIWLK 156
Query: 456 GEDLQPV 476
EDLQPV
Sbjct: 157 REDLQPV 163
>gb|AAG59585.1|AF229927_1 threonine deaminase [Nicotiana attenuata]
gi|60502212|gb|AAX22214.1| threonine deaminase
[Nicotiana attenuata]
Length = 601
Score = 66.2 bits (160), Expect = 4e-09
Identities = 38/66 (57%), Positives = 48/66 (72%), Gaps = 6/66 (9%)
Frame = +3
Query: 297 EPGYLIPNHPVEGNGGDSG--FQYLIDILGTRVYDVAQESPLQ----LSQKLGVNVWLKG 458
E G LI N+P +GGD+ FQYL++IL +RVYDVA +SPLQ LS+KLGVN W+K
Sbjct: 84 EAGKLIENNP---SGGDTEELFQYLVEILASRVYDVAIDSPLQNAAKLSKKLGVNFWIKR 140
Query: 459 EDLQPV 476
ED+Q V
Sbjct: 141 EDMQSV 146
>gb|ESW17270.1| hypothetical protein PHAVU_007G225400g [Phaseolus vulgaris]
Length = 601
Score = 62.0 bits (149), Expect = 8e-08
Identities = 36/68 (52%), Positives = 45/68 (66%), Gaps = 9/68 (13%)
Frame = +3
Query: 300 PGYL--IPNHPVEGNGGD---SGFQYLIDILGTRVYDVAQESPLQ----LSQKLGVNVWL 452
PGY+ +PN +GGD + YL +IL ++VYDVA E+PLQ LS +LGV VWL
Sbjct: 79 PGYVGAVPNRSRPDSGGDGVMNAMNYLTNILTSKVYDVAIETPLQLAPKLSTRLGVKVWL 138
Query: 453 KGEDLQPV 476
K EDLQPV
Sbjct: 139 KREDLQPV 146
>ref|XP_004981992.1| PREDICTED: threonine dehydratase biosynthetic, chloroplastic-like
[Setaria italica]
Length = 600
Score = 62.0 bits (149), Expect = 8e-08
Identities = 30/52 (57%), Positives = 37/52 (71%), Gaps = 4/52 (7%)
Frame = +3
Query: 333 GNGGDSGFQYLIDILGTRVYDVAQESPLQ----LSQKLGVNVWLKGEDLQPV 476
G GG +YL +L ++VYDVA ESPLQ LS +LGVN+W+K EDLQPV
Sbjct: 89 GGGGPGAMEYLTSVLSSKVYDVAIESPLQLATKLSDRLGVNLWIKREDLQPV 140
>ref|XP_002528625.1| threonine dehydratase/deaminase, putative [Ricinus communis]
gi|223531914|gb|EEF33728.1| threonine
dehydratase/deaminase, putative [Ricinus communis]
Length = 618
Score = 61.6 bits (148), Expect = 1e-07
Identities = 36/68 (52%), Positives = 45/68 (66%), Gaps = 9/68 (13%)
Frame = +3
Query: 300 PGYL--IPNHPVEGNGGD---SGFQYLIDILGTRVYDVAQESPLQ----LSQKLGVNVWL 452
PGYL +P+ V NG + + YL +IL ++VYDVA ESPLQ LS++L V VWL
Sbjct: 96 PGYLGAVPDRAVNNNGANDIINAMGYLTNILSSKVYDVAIESPLQFAPKLSERLKVKVWL 155
Query: 453 KGEDLQPV 476
K EDLQPV
Sbjct: 156 KREDLQPV 163
>ref|XP_006366786.1| PREDICTED: threonine dehydratase biosynthetic, chloroplastic-like
[Solanum tuberosum]
Length = 596
Score = 60.8 bits (146), Expect = 2e-07
Identities = 34/66 (51%), Positives = 45/66 (68%), Gaps = 4/66 (6%)
Frame = +3
Query: 291 RCEPGYLIPNHPVEGNGGDSGFQYLIDILGTRVYDVAQESPLQLSQK----LGVNVWLKG 458
+ +PG L+ N+P GN D QYL+DIL + VYDVA ESPL+L++K LGVN ++K
Sbjct: 76 KVDPGELVVNNPTGGNP-DELIQYLVDILASPVYDVAIESPLELAKKLSTRLGVNFYIKR 134
Query: 459 EDLQPV 476
ED Q V
Sbjct: 135 EDKQSV 140
>ref|XP_004497558.1| PREDICTED: threonine dehydratase biosynthetic, chloroplastic-like
isoform X1 [Cicer arietinum]
gi|502122059|ref|XP_004497559.1| PREDICTED: threonine
dehydratase biosynthetic, chloroplastic-like isoform X2
[Cicer arietinum]
Length = 601
Score = 60.8 bits (146), Expect = 2e-07
Identities = 33/67 (49%), Positives = 44/67 (65%), Gaps = 8/67 (11%)
Frame = +3
Query: 300 PGYL--IPNHPVEGNGGD--SGFQYLIDILGTRVYDVAQESPLQ----LSQKLGVNVWLK 455
PGY+ +P+ GN D YL IL +RVYDVA++SPL+ LS++LGVN+WLK
Sbjct: 80 PGYVGAVPDRSHSGNDDDINGAMDYLTKILSSRVYDVAEDSPLELAPKLSERLGVNIWLK 139
Query: 456 GEDLQPV 476
ED+Q V
Sbjct: 140 REDMQTV 146
>ref|XP_002466574.1| hypothetical protein SORBIDRAFT_01g010250 [Sorghum bicolor]
gi|241920428|gb|EER93572.1| hypothetical protein
SORBIDRAFT_01g010250 [Sorghum bicolor]
Length = 605
Score = 60.8 bits (146), Expect = 2e-07
Identities = 32/54 (59%), Positives = 39/54 (72%), Gaps = 4/54 (7%)
Frame = +3
Query: 327 VEGNGGDSGFQYLIDILGTRVYDVAQESPLQ----LSQKLGVNVWLKGEDLQPV 476
VEG GG +YL +L ++VYDVA ESPLQ LS +LGVN+W+K EDLQPV
Sbjct: 93 VEG-GGPGAMEYLTSVLSSKVYDVAIESPLQLATKLSDRLGVNLWIKREDLQPV 145
>ref|XP_004246590.1| PREDICTED: threonine dehydratase biosynthetic, chloroplastic
[Solanum lycopersicum] gi|135721|sp|P25306.1|THD1_SOLLC
RecName: Full=Threonine dehydratase biosynthetic,
chloroplastic; AltName: Full=Threonine deaminase;
Short=TD; Flags: Precursor gi|170460|gb|AAA68097.1|
threonine deaminase [Solanum lycopersicum]
Length = 595
Score = 60.5 bits (145), Expect = 2e-07
Identities = 35/63 (55%), Positives = 43/63 (68%), Gaps = 4/63 (6%)
Frame = +3
Query: 300 PGYLIPNHPVEGNGGDSGFQYLIDILGTRVYDVAQESPLQLSQK----LGVNVWLKGEDL 467
PG LI N P G+ D FQYL+DIL + VYDVA ESPL+L++K LGVN ++K ED
Sbjct: 78 PGELIVNKPTGGDS-DELFQYLVDILASPVYDVAIESPLELAEKLSDRLGVNFYIKREDK 136
Query: 468 QPV 476
Q V
Sbjct: 137 QRV 139
>ref|XP_006650494.1| PREDICTED: threonine dehydratase biosynthetic, chloroplastic-like
[Oryza brachyantha]
Length = 515
Score = 60.5 bits (145), Expect = 2e-07
Identities = 29/50 (58%), Positives = 37/50 (74%), Gaps = 4/50 (8%)
Frame = +3
Query: 339 GGDSGFQYLIDILGTRVYDVAQESPLQ----LSQKLGVNVWLKGEDLQPV 476
GG +YL +L ++VYDVA ESPLQ LS++LGVN+W+K EDLQPV
Sbjct: 6 GGPGAMEYLTSVLSSKVYDVAIESPLQLATKLSERLGVNMWIKREDLQPV 55
>gb|AAA34171.1| threonine deaminase, partial [Solanum lycopersicum]
Length = 594
Score = 60.5 bits (145), Expect = 2e-07
Identities = 35/63 (55%), Positives = 43/63 (68%), Gaps = 4/63 (6%)
Frame = +3
Query: 300 PGYLIPNHPVEGNGGDSGFQYLIDILGTRVYDVAQESPLQLSQK----LGVNVWLKGEDL 467
PG LI N P G+ D FQYL+DIL + VYDVA ESPL+L++K LGVN ++K ED
Sbjct: 77 PGELIVNKPTGGDS-DELFQYLVDILASPVYDVAIESPLELAEKLSDRLGVNFYIKREDK 135
Query: 468 QPV 476
Q V
Sbjct: 136 QRV 138
>gb|AFW67825.1| hypothetical protein ZEAMMB73_108837 [Zea mays]
Length = 150
Score = 60.5 bits (145), Expect = 2e-07
Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 4/50 (8%)
Frame = +3
Query: 339 GGDSGFQYLIDILGTRVYDVAQESPLQ----LSQKLGVNVWLKGEDLQPV 476
GG +YL +L ++VYDVA ESPLQ LS +LGVN+W+K EDLQPV
Sbjct: 94 GGPGAMEYLTSVLSSKVYDVAIESPLQLASKLSHRLGVNIWIKREDLQPV 143
>pdb|3IAU|A Chain A, The Structure Of The Processed Form Of Threonine Deaminase
Isoform 2 From Solanum Lycopersicum
gi|254839680|pdb|3IAU|B Chain B, The Structure Of The
Processed Form Of Threonine Deaminase Isoform 2 From
Solanum Lycopersicum
Length = 366
Score = 60.5 bits (145), Expect = 2e-07
Identities = 35/63 (55%), Positives = 43/63 (68%), Gaps = 4/63 (6%)
Frame = +3
Query: 300 PGYLIPNHPVEGNGGDSGFQYLIDILGTRVYDVAQESPLQLSQK----LGVNVWLKGEDL 467
PG LI N P G+ D FQYL+DIL + VYDVA ESPL+L++K LGVN ++K ED
Sbjct: 26 PGELIVNKPTGGDS-DELFQYLVDILASPVYDVAIESPLELAEKLSDRLGVNFYIKREDK 84
Query: 468 QPV 476
Q V
Sbjct: 85 QRV 87