BLASTX nr result

ID: Atropa21_contig00032801 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00032801
         (531 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76151.1| hypothetical protein VITISV_012673 [Vitis vinifera]    37   4e-07
emb|CAN61376.1| hypothetical protein VITISV_011846 [Vitis vinifera]    44   4e-06

>emb|CAN76151.1| hypothetical protein VITISV_012673 [Vitis vinifera]
          Length = 979

 Score = 37.4 bits (85), Expect(3) = 4e-07
 Identities = 15/29 (51%), Positives = 20/29 (68%)
 Frame = -3

Query: 523 HRGYLCYDMSTLKILVSRHVTFDENVFPF 437
           H+G+L  DM++ +I  S HV FDE  FPF
Sbjct: 454 HKGFLYLDMASSQIYASHHVVFDETQFPF 482



 Score = 36.2 bits (82), Expect(3) = 4e-07
 Identities = 21/53 (39%), Positives = 30/53 (56%)
 Frame = -1

Query: 336 STPATSSKNVPPHQLATFSVPMTLPDNYILPHPTDLPSPVTLPSCLSHSTT*D 178
           S P  SS+N P H    FS P+T+P +++  HP   PS  TLP   + ++T D
Sbjct: 508 SIPPPSSRN-PNHPQPIFSSPITIPTDFVPSHP---PSSPTLPQSSTPASTID 556



 Score = 25.0 bits (53), Expect(3) = 4e-07
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = -2

Query: 137 IPTHRMETRAQYEIFKSKVHFNLSTQIISPIPKTL*LAKLDANW 6
           +P   + T +Q  IFK K  F+L  Q I   P +   A L  +W
Sbjct: 560 LPNRTIVTCSQNGIFKPKKIFSLVVQTIVVEPSSFKEAMLHXDW 603


>emb|CAN61376.1| hypothetical protein VITISV_011846 [Vitis vinifera]
          Length = 675

 Score = 43.9 bits (102), Expect(2) = 4e-06
 Identities = 17/31 (54%), Positives = 23/31 (74%)
 Frame = -3

Query: 529 SNHRGYLCYDMSTLKILVSRHVTFDENVFPF 437
           + H+G+LC DM++ +I  SRHV FDE  FPF
Sbjct: 299 AKHKGFLCLDMASSRIYASRHVVFDETRFPF 329



 Score = 32.3 bits (72), Expect(2) = 4e-06
 Identities = 18/46 (39%), Positives = 24/46 (52%)
 Frame = -1

Query: 336 STPATSSKNVPPHQLATFSVPMTLPDNYILPHPTDLPSPVTLPSCL 199
           S P  SS+N P H    FS P+ +P +++  HP   P   TLP  L
Sbjct: 355 SIPPPSSRN-PHHSPPNFSSPIIVPTDFVPSHPPSFP---TLPQSL 396


Top