BLASTX nr result

ID: Atropa21_contig00032792 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00032792
         (607 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006359442.1| PREDICTED: translocase of chloroplast 159, c...    80   1e-24
ref|XP_004247537.1| PREDICTED: translocase of chloroplast 159, c...    82   1e-22

>ref|XP_006359442.1| PREDICTED: translocase of chloroplast 159, chloroplastic-like
           [Solanum tuberosum]
          Length = 1567

 Score = 80.5 bits (197), Expect(2) = 1e-24
 Identities = 45/62 (72%), Positives = 48/62 (77%), Gaps = 2/62 (3%)
 Frame = -2

Query: 180 GGEKE*RGCVE*XIGNSLPDSTD--ATESPGTGIEGSEGNTEEFDSVDKSNSIEQVKESG 7
           GG+ E  G     IGNSLPDSTD  AT+S GTGIEGSEGNTEEFD VDK NSIEQVK+ G
Sbjct: 222 GGKGEDVGGSVPAIGNSLPDSTDSDATKSLGTGIEGSEGNTEEFDPVDKLNSIEQVKDGG 281

Query: 6   GE 1
           GE
Sbjct: 282 GE 283



 Score = 58.9 bits (141), Expect(2) = 1e-24
 Identities = 58/162 (35%), Positives = 73/162 (45%), Gaps = 30/162 (18%)
 Frame = -3

Query: 551 QLRSGVVV--DAMDSEEATXXXXXXXXXXXXXXXXXSHD-TQIENVSKINLEXXXXXXXX 381
           +L SGVVV   AMDSEEAT                 S + T+ ENVSKIN+E        
Sbjct: 82  KLSSGVVVVVGAMDSEEATFSPPAVSSPGSSPINSSSSNHTETENVSKINVEITDSDINS 141

Query: 380 XXXXXXXXXXXXNTVNDGTTVSGQQ-EKTVTGPEN--PVPAEPDEETL------------ 246
                          ++G +VSG   + T+ G +   P+PA+PDE TL            
Sbjct: 142 NSN------------SEGKSVSGVSGDVTIVGSQQELPIPADPDEGTLEKTIGEEQLNDS 189

Query: 245 ------------EKPVSEVSVNEGVEKVDKVEVLGGKKSEGV 156
                       EKPVSEVS++EGVE    VE+LGG K E V
Sbjct: 190 VVGSADVSMLKSEKPVSEVSMSEGVE---NVEILGGGKGEDV 228


>ref|XP_004247537.1| PREDICTED: translocase of chloroplast 159, chloroplastic-like
           [Solanum lycopersicum]
          Length = 1276

 Score = 81.6 bits (200), Expect(2) = 1e-22
 Identities = 42/49 (85%), Positives = 45/49 (91%), Gaps = 2/49 (4%)
 Frame = -2

Query: 141 IGNSLPDSTD--ATESPGTGIEGSEGNTEEFDSVDKSNSIEQVKESGGE 1
           IGNSLPDSTD  AT+S GTGIEGSEGNTEEFDSVDK NSIEQVK++GGE
Sbjct: 130 IGNSLPDSTDSDATKSLGTGIEGSEGNTEEFDSVDKLNSIEQVKDNGGE 178



 Score = 50.8 bits (120), Expect(2) = 1e-22
 Identities = 49/137 (35%), Positives = 58/137 (42%), Gaps = 21/137 (15%)
 Frame = -3

Query: 521 MDSEEATXXXXXXXXXXXXXXXXXS--HDTQIENVSKINLEXXXXXXXXXXXXXXXXXXX 348
           MDSEEAT                 S  + T+ ENVSKIN+E                   
Sbjct: 1   MDSEEATFSPPAVSSSPGSSPINNSSSNHTETENVSKINVEINDSDINSNSNSEGK---- 56

Query: 347 XNTVNDGTTVSGQQEKTVTGPENPVPAEPDEETL-------------------EKPVSEV 225
             + +D T V GQQE        P+PA+PDE TL                   EKPVSEV
Sbjct: 57  --SASDVTIVGGQQEL-------PIPADPDEGTLEKTIGEEKLDDSVVGSAEIEKPVSEV 107

Query: 224 SVNEGVEKVDKVEVLGG 174
           S++EGVE    VE LGG
Sbjct: 108 SMSEGVE---NVEALGG 121


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