BLASTX nr result
ID: Atropa21_contig00032767
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00032767
(622 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006359788.1| PREDICTED: polyadenylate-binding protein 2-l... 92 1e-16
ref|XP_004248796.1| PREDICTED: polyadenylate-binding protein 2-l... 86 6e-15
gb|EXB55273.1| Polyadenylate-binding protein 2 [Morus notabilis] 74 3e-11
ref|XP_002279148.1| PREDICTED: polyadenylate-binding protein 2-l... 69 1e-09
emb|CAN77560.1| hypothetical protein VITISV_031100 [Vitis vinifera] 69 1e-09
gb|EOY22721.1| RNA-binding family protein [Theobroma cacao] 65 2e-08
ref|XP_004307764.1| PREDICTED: polyadenylate-binding protein 2-l... 64 3e-08
ref|XP_006466250.1| PREDICTED: polyadenylate-binding protein 2-l... 64 3e-08
ref|XP_006426355.1| hypothetical protein CICLE_v100264481mg, par... 64 3e-08
gb|AFK37484.1| unknown [Lotus japonicus] 63 6e-08
gb|ESW31114.1| hypothetical protein PHAVU_002G210300g [Phaseolus... 63 8e-08
ref|XP_006374587.1| hypothetical protein POPTR_0015s12230g [Popu... 63 8e-08
ref|XP_006374586.1| hypothetical protein POPTR_0015s12230g [Popu... 63 8e-08
ref|XP_006376950.1| hypothetical protein POPTR_0012s11480g [Popu... 62 1e-07
gb|EMJ20016.1| hypothetical protein PRUPE_ppa010052mg [Prunus pe... 62 1e-07
ref|XP_006828070.1| hypothetical protein AMTR_s00008p00267630 [A... 62 2e-07
ref|XP_004166616.1| PREDICTED: polyadenylate-binding protein 2-l... 62 2e-07
ref|XP_004146890.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylat... 62 2e-07
ref|XP_004168611.1| PREDICTED: polyadenylate-binding protein 2-l... 61 2e-07
ref|XP_004137160.1| PREDICTED: polyadenylate-binding protein 2-l... 61 2e-07
>ref|XP_006359788.1| PREDICTED: polyadenylate-binding protein 2-like [Solanum tuberosum]
Length = 196
Score = 92.0 bits (227), Expect = 1e-16
Identities = 38/45 (84%), Positives = 42/45 (93%)
Frame = -3
Query: 620 RARRPNPYKGFRGQTPFMSAPYFFPSYGYGKVPKARAPMRYSPYF 486
RARRPNPY GFRG+TPFM APYFFP +GYGK+P+ARAPMRYSPYF
Sbjct: 152 RARRPNPYMGFRGRTPFMPAPYFFPPFGYGKIPRARAPMRYSPYF 196
>ref|XP_004248796.1| PREDICTED: polyadenylate-binding protein 2-like [Solanum
lycopersicum]
Length = 196
Score = 86.3 bits (212), Expect = 6e-15
Identities = 36/45 (80%), Positives = 40/45 (88%)
Frame = -3
Query: 620 RARRPNPYKGFRGQTPFMSAPYFFPSYGYGKVPKARAPMRYSPYF 486
RARRPN Y GFRG+ PFM APYFFP +GYGK+P+ARAPMRYSPYF
Sbjct: 152 RARRPNLYMGFRGRAPFMPAPYFFPPFGYGKIPRARAPMRYSPYF 196
>gb|EXB55273.1| Polyadenylate-binding protein 2 [Morus notabilis]
Length = 197
Score = 73.9 bits (180), Expect = 3e-11
Identities = 29/45 (64%), Positives = 36/45 (80%)
Frame = -3
Query: 620 RARRPNPYKGFRGQTPFMSAPYFFPSYGYGKVPKARAPMRYSPYF 486
R RRPNPY GFRG++P++ P+ + YGYGKVP+ R PMRYSPYF
Sbjct: 153 RPRRPNPYMGFRGRSPYVPPPFMYSPYGYGKVPRMRMPMRYSPYF 197
>ref|XP_002279148.1| PREDICTED: polyadenylate-binding protein 2-like [Vitis vinifera]
Length = 226
Score = 68.6 bits (166), Expect = 1e-09
Identities = 29/44 (65%), Positives = 34/44 (77%)
Frame = -3
Query: 620 RARRPNPYKGFRGQTPFMSAPYFFPSYGYGKVPKARAPMRYSPY 489
R RRPNP+ GFRG+ PFM P F+P YGYG+VP+ R PMRY PY
Sbjct: 184 RGRRPNPF-GFRGRRPFMPGPSFYPPYGYGRVPRFRRPMRYRPY 226
>emb|CAN77560.1| hypothetical protein VITISV_031100 [Vitis vinifera]
Length = 175
Score = 68.6 bits (166), Expect = 1e-09
Identities = 29/44 (65%), Positives = 34/44 (77%)
Frame = -3
Query: 620 RARRPNPYKGFRGQTPFMSAPYFFPSYGYGKVPKARAPMRYSPY 489
R RRPNP+ GFRG+ PFM P F+P YGYG+VP+ R PMRY PY
Sbjct: 133 RGRRPNPF-GFRGRRPFMPGPSFYPPYGYGRVPRFRRPMRYRPY 175
>gb|EOY22721.1| RNA-binding family protein [Theobroma cacao]
Length = 230
Score = 65.1 bits (157), Expect = 2e-08
Identities = 28/44 (63%), Positives = 32/44 (72%)
Frame = -3
Query: 620 RARRPNPYKGFRGQTPFMSAPYFFPSYGYGKVPKARAPMRYSPY 489
R RRPNPY FR + PFM P F+P YGYG+VP+ R PMRY PY
Sbjct: 189 RGRRPNPY--FRSRRPFMPGPAFYPPYGYGRVPRFRRPMRYRPY 230
>ref|XP_004307764.1| PREDICTED: polyadenylate-binding protein 2-like [Fragaria vesca
subsp. vesca]
Length = 219
Score = 64.3 bits (155), Expect = 3e-08
Identities = 28/44 (63%), Positives = 34/44 (77%)
Frame = -3
Query: 620 RARRPNPYKGFRGQTPFMSAPYFFPSYGYGKVPKARAPMRYSPY 489
R RRPNP+ FR + PFM+A F+PSYGYG+VP+ R PMRY PY
Sbjct: 178 RGRRPNPF--FRSRRPFMAAAPFYPSYGYGRVPRFRRPMRYRPY 219
>ref|XP_006466250.1| PREDICTED: polyadenylate-binding protein 2-like [Citrus sinensis]
Length = 218
Score = 63.9 bits (154), Expect = 3e-08
Identities = 27/45 (60%), Positives = 34/45 (75%)
Frame = -3
Query: 620 RARRPNPYKGFRGQTPFMSAPYFFPSYGYGKVPKARAPMRYSPYF 486
R RR NPY G+RG+ P++ PYF+ YGYGKVP+ R PMRY PY+
Sbjct: 175 RPRRFNPYMGYRGRRPYVP-PYFYSPYGYGKVPRFRRPMRYMPYY 218
>ref|XP_006426355.1| hypothetical protein CICLE_v100264481mg, partial [Citrus
clementina] gi|557528345|gb|ESR39595.1| hypothetical
protein CICLE_v100264481mg, partial [Citrus clementina]
Length = 122
Score = 63.9 bits (154), Expect = 3e-08
Identities = 27/45 (60%), Positives = 34/45 (75%)
Frame = -3
Query: 620 RARRPNPYKGFRGQTPFMSAPYFFPSYGYGKVPKARAPMRYSPYF 486
R RR NPY G+RG+ P++ PYF+ YGYGKVP+ R PMRY PY+
Sbjct: 79 RPRRFNPYMGYRGRRPYVP-PYFYSPYGYGKVPRFRRPMRYMPYY 122
>gb|AFK37484.1| unknown [Lotus japonicus]
Length = 200
Score = 63.2 bits (152), Expect = 6e-08
Identities = 27/45 (60%), Positives = 31/45 (68%)
Frame = -3
Query: 620 RARRPNPYKGFRGQTPFMSAPYFFPSYGYGKVPKARAPMRYSPYF 486
R R PNPY GFRG+ F P+ F YGYGKVP+ R MRYSPY+
Sbjct: 156 RPRAPNPYMGFRGRALFAPPPFAFAPYGYGKVPRFRMGMRYSPYY 200
>gb|ESW31114.1| hypothetical protein PHAVU_002G210300g [Phaseolus vulgaris]
Length = 198
Score = 62.8 bits (151), Expect = 8e-08
Identities = 26/45 (57%), Positives = 35/45 (77%)
Frame = -3
Query: 620 RARRPNPYKGFRGQTPFMSAPYFFPSYGYGKVPKARAPMRYSPYF 486
R RRPNPY+GFRG+ P+ + P+ + +GYGKVP+ R MRYSPY+
Sbjct: 155 RPRRPNPYQGFRGRAPY-APPFAYAPFGYGKVPRFRMGMRYSPYY 198
>ref|XP_006374587.1| hypothetical protein POPTR_0015s12230g [Populus trichocarpa]
gi|550322555|gb|ERP52384.1| hypothetical protein
POPTR_0015s12230g [Populus trichocarpa]
Length = 226
Score = 62.8 bits (151), Expect = 8e-08
Identities = 29/44 (65%), Positives = 34/44 (77%)
Frame = -3
Query: 620 RARRPNPYKGFRGQTPFMSAPYFFPSYGYGKVPKARAPMRYSPY 489
R RRP+PY GFR Q FM AP F+P+YGYG+VP+ R PMRY PY
Sbjct: 185 RGRRPSPY-GFRSQRAFMPAP-FYPAYGYGRVPRFRRPMRYRPY 226
>ref|XP_006374586.1| hypothetical protein POPTR_0015s12230g [Populus trichocarpa]
gi|550322554|gb|ERP52383.1| hypothetical protein
POPTR_0015s12230g [Populus trichocarpa]
Length = 223
Score = 62.8 bits (151), Expect = 8e-08
Identities = 29/44 (65%), Positives = 34/44 (77%)
Frame = -3
Query: 620 RARRPNPYKGFRGQTPFMSAPYFFPSYGYGKVPKARAPMRYSPY 489
R RRP+PY GFR Q FM AP F+P+YGYG+VP+ R PMRY PY
Sbjct: 182 RGRRPSPY-GFRSQRAFMPAP-FYPAYGYGRVPRFRRPMRYRPY 223
>ref|XP_006376950.1| hypothetical protein POPTR_0012s11480g [Populus trichocarpa]
gi|550326885|gb|ERP54747.1| hypothetical protein
POPTR_0012s11480g [Populus trichocarpa]
Length = 226
Score = 62.0 bits (149), Expect = 1e-07
Identities = 28/44 (63%), Positives = 34/44 (77%)
Frame = -3
Query: 620 RARRPNPYKGFRGQTPFMSAPYFFPSYGYGKVPKARAPMRYSPY 489
R RRP+PY G R + PFM AP F+P+YGYG+VP+ R PMRY PY
Sbjct: 185 RGRRPSPY-GLRSRRPFMPAP-FYPAYGYGRVPRFRRPMRYRPY 226
>gb|EMJ20016.1| hypothetical protein PRUPE_ppa010052mg [Prunus persica]
Length = 266
Score = 62.0 bits (149), Expect = 1e-07
Identities = 27/44 (61%), Positives = 33/44 (75%)
Frame = -3
Query: 620 RARRPNPYKGFRGQTPFMSAPYFFPSYGYGKVPKARAPMRYSPY 489
R RRPNP+ FR + PF+ A FFP+YGYG+VP+ R PMRY PY
Sbjct: 225 RGRRPNPF--FRSRRPFIPAAPFFPAYGYGRVPRFRRPMRYRPY 266
>ref|XP_006828070.1| hypothetical protein AMTR_s00008p00267630 [Amborella trichopoda]
gi|548832705|gb|ERM95486.1| hypothetical protein
AMTR_s00008p00267630 [Amborella trichopoda]
Length = 220
Score = 61.6 bits (148), Expect = 2e-07
Identities = 27/45 (60%), Positives = 32/45 (71%)
Frame = -3
Query: 620 RARRPNPYKGFRGQTPFMSAPYFFPSYGYGKVPKARAPMRYSPYF 486
R RR NPY +R + P+M PYF+ YGYGKVP+ R PMRY PYF
Sbjct: 177 RPRRFNPYLAYRSRRPYMP-PYFYSPYGYGKVPRFRRPMRYRPYF 220
>ref|XP_004166616.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 229
Score = 61.6 bits (148), Expect = 2e-07
Identities = 30/45 (66%), Positives = 36/45 (80%), Gaps = 1/45 (2%)
Frame = -3
Query: 620 RARRPNPYKGFRGQTPFM-SAPYFFPSYGYGKVPKARAPMRYSPY 489
R RRPNP+ GFRG+ PF+ +APY PSYGYG+VP+ R PMRY PY
Sbjct: 188 RGRRPNPF-GFRGRRPFIPTAPY--PSYGYGRVPRFRRPMRYRPY 229
>ref|XP_004146890.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
2-like [Cucumis sativus]
Length = 237
Score = 61.6 bits (148), Expect = 2e-07
Identities = 30/45 (66%), Positives = 36/45 (80%), Gaps = 1/45 (2%)
Frame = -3
Query: 620 RARRPNPYKGFRGQTPFM-SAPYFFPSYGYGKVPKARAPMRYSPY 489
R RRPNP+ GFRG+ PF+ +APY PSYGYG+VP+ R PMRY PY
Sbjct: 196 RGRRPNPF-GFRGRRPFIPTAPY--PSYGYGRVPRFRRPMRYRPY 237
>ref|XP_004168611.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 196
Score = 61.2 bits (147), Expect = 2e-07
Identities = 26/45 (57%), Positives = 33/45 (73%)
Frame = -3
Query: 620 RARRPNPYKGFRGQTPFMSAPYFFPSYGYGKVPKARAPMRYSPYF 486
R RR NP+ G R ++P++ APYFF YGYGKVP+ R P RY PY+
Sbjct: 153 RPRRSNPFMGARSRSPYV-APYFFSPYGYGKVPRFRMPTRYGPYY 196
>ref|XP_004137160.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 196
Score = 61.2 bits (147), Expect = 2e-07
Identities = 26/45 (57%), Positives = 33/45 (73%)
Frame = -3
Query: 620 RARRPNPYKGFRGQTPFMSAPYFFPSYGYGKVPKARAPMRYSPYF 486
R RR NP+ G R ++P++ APYFF YGYGKVP+ R P RY PY+
Sbjct: 153 RPRRSNPFMGARSRSPYV-APYFFSPYGYGKVPRFRMPTRYGPYY 196