BLASTX nr result
ID: Atropa21_contig00032688
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atropa21_contig00032688 (723 letters) Database: nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004238595.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho... 77 6e-12 ref|XP_006367294.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho... 75 2e-11 >ref|XP_004238595.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Solanum lycopersicum] Length = 860 Score = 77.0 bits (188), Expect = 6e-12 Identities = 50/128 (39%), Positives = 60/128 (46%), Gaps = 12/128 (9%) Frame = -1 Query: 348 IKNEPEVDEGXXXXXXXXRYEGEVDDMKDNKKERSRRNEGESXXXXXXXXXXXXXXXXXX 169 + ++ + DE R+EGE D+KD+KKE+SRRNEGES Sbjct: 137 VDDDGDDDERDDRRKKRRRHEGEGGDLKDDKKEKSRRNEGESNGRKERRRREDDDEKVHK 196 Query: 168 RMKDEHGYRDRV------------XXXXXXXXXXXXXXXXXXXETRERVGDDKHGKEKNR 25 R KDEHG RDRV + R+R GDDKHGKE NR Sbjct: 197 RRKDEHGLRDRVDRYNDGREGDKRGRKDVEREKRVDGDDNNRKDIRQRDGDDKHGKENNR 256 Query: 24 KDNAQEDG 1 KDNAQEDG Sbjct: 257 KDNAQEDG 264 >ref|XP_006367294.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Solanum tuberosum] Length = 951 Score = 75.1 bits (183), Expect = 2e-11 Identities = 55/132 (41%), Positives = 62/132 (46%), Gaps = 15/132 (11%) Frame = -1 Query: 351 SIKNEPEVD---EGXXXXXXXXRYEGEVDDMKDNKKERSRRNEGESXXXXXXXXXXXXXX 181 S K E +VD E R+EGE D+KD+KKERSRRNEGES Sbjct: 224 SRKEETQVDDDDERDDRRKKRRRHEGEGGDLKDDKKERSRRNEGESNDRKERRQREDDDE 283 Query: 180 XXXXRMKDEHGYRDRVXXXXXXXXXXXXXXXXXXXET------------RERVGDDKHGK 37 R K+E G+RDRV E R+R GDDKHGK Sbjct: 284 KVHKRRKNELGHRDRVDRYNDGREGDKKGRKDVEREKMVDGDDNNRKDIRQRDGDDKHGK 343 Query: 36 EKNRKDNAQEDG 1 EKNRKDNAQEDG Sbjct: 344 EKNRKDNAQEDG 355