BLASTX nr result

ID: Atropa21_contig00032662 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00032662
         (514 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004246084.1| PREDICTED: uncharacterized protein LOC101250...   115   6e-24
gb|AAW28576.2| Gag-pol polyprotein, putative [Solanum demissum]        84   2e-14
ref|XP_006343532.1| PREDICTED: uncharacterized protein LOC102604...    80   2e-13
ref|XP_006356397.1| PREDICTED: uncharacterized protein LOC102605...    72   1e-10
ref|XP_004246828.1| PREDICTED: uncharacterized protein LOC101260...    63   3e-08
ref|XP_004231672.1| PREDICTED: uncharacterized protein LOC101259...    59   9e-07
ref|XP_004252483.1| PREDICTED: uncharacterized protein LOC101247...    57   3e-06

>ref|XP_004246084.1| PREDICTED: uncharacterized protein LOC101250145 [Solanum
           lycopersicum]
          Length = 678

 Score =  115 bits (288), Expect = 6e-24
 Identities = 57/86 (66%), Positives = 66/86 (76%)
 Frame = -2

Query: 258 EIPSEDGSDVDEE*RAFRQXXXXXXXXXKVAATQEIPIEEADGIDRGFEDIGRNTANKYA 79
           +IPSEDGSD+DEE RAFR+         K A  +EIP+ EA GIDRGFEDIG+N  +KYA
Sbjct: 110 DIPSEDGSDIDEELRAFREERRNKKQRKKAAEFEEIPVGEAGGIDRGFEDIGKNKTDKYA 169

Query: 78  GKLGGDEKYIDNSGCSSDDSDEELDV 1
           GKLGGDE YID+S C SDDSDE+LDV
Sbjct: 170 GKLGGDEDYIDSSDCWSDDSDEQLDV 195


>gb|AAW28576.2| Gag-pol polyprotein, putative [Solanum demissum]
          Length = 1096

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 44/84 (52%), Positives = 56/84 (66%)
 Frame = -2

Query: 255 IPSEDGSDVDEE*RAFRQXXXXXXXXXKVAATQEIPIEEADGIDRGFEDIGRNTANKYAG 76
           IP +D S++DEE R FR          K  +T+EI +  A G+DRGFEDIGRN   +Y G
Sbjct: 204 IPDDDDSEIDEELRTFRNERRTKLQRKKPDSTEEIILGVA-GVDRGFEDIGRNKTARYVG 262

Query: 75  KLGGDEKYIDNSGCSSDDSDEELD 4
           +LGGDE+YID+S   SDDS +ELD
Sbjct: 263 RLGGDEQYIDSSELDSDDSRDELD 286


>ref|XP_006343532.1| PREDICTED: uncharacterized protein LOC102604587 [Solanum tuberosum]
          Length = 506

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 45/84 (53%), Positives = 54/84 (64%)
 Frame = -2

Query: 255 IPSEDGSDVDEE*RAFRQXXXXXXXXXKVAATQEIPIEEADGIDRGFEDIGRNTANKYAG 76
           I  ED S+VDEE R+ R          K   T+EI +    GIDRGFEDIGRN A +Y G
Sbjct: 142 ILDEDDSEVDEELRSLRNERRNKVKKEKPIQTEEIKLGTT-GIDRGFEDIGRNKAARYTG 200

Query: 75  KLGGDEKYIDNSGCSSDDSDEELD 4
           +LGGDE+YID+S   SDDS +ELD
Sbjct: 201 RLGGDEQYIDSSELDSDDSRDELD 224


>ref|XP_006356397.1| PREDICTED: uncharacterized protein LOC102605109 [Solanum tuberosum]
          Length = 573

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 32/52 (61%), Positives = 41/52 (78%)
 Frame = -2

Query: 159 QEIPIEEADGIDRGFEDIGRNTANKYAGKLGGDEKYIDNSGCSSDDSDEELD 4
           +E+ +  A G+DRGFEDIGRN A +Y G+LGGDE+YID+S   SDDS +ELD
Sbjct: 3   KELELTAATGVDRGFEDIGRNKAARYVGRLGGDEQYIDSSELDSDDSRDELD 54


>ref|XP_004246828.1| PREDICTED: uncharacterized protein LOC101260857 [Solanum
           lycopersicum]
          Length = 443

 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 28/43 (65%), Positives = 35/43 (81%)
 Frame = -2

Query: 132 GIDRGFEDIGRNTANKYAGKLGGDEKYIDNSGCSSDDSDEELD 4
           GIDRGFEDIGRN   +Y G+LGG+E+YID+S   S+DS +ELD
Sbjct: 398 GIDRGFEDIGRNKTVRYTGRLGGEEQYIDSSELDSEDSRDELD 440


>ref|XP_004231672.1| PREDICTED: uncharacterized protein LOC101259794 [Solanum
           lycopersicum]
          Length = 837

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 25/50 (50%), Positives = 38/50 (76%)
 Frame = -2

Query: 153 IPIEEADGIDRGFEDIGRNTANKYAGKLGGDEKYIDNSGCSSDDSDEELD 4
           + +++++ +  GFEDIGRN A +Y G+LGGDE+YID+    S+DS +ELD
Sbjct: 152 LDVDDSELVFIGFEDIGRNKAARYTGRLGGDEQYIDSLALDSEDSRDELD 201


>ref|XP_004252483.1| PREDICTED: uncharacterized protein LOC101247704 [Solanum
           lycopersicum]
          Length = 803

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 34/89 (38%), Positives = 46/89 (51%)
 Frame = -2

Query: 267 NLGEIPSEDGSDVDEE*RAFRQXXXXXXXXXKVAATQEIPIEEADGIDRGFEDIGRNTAN 88
           +L ++P +D S++DEE R+FR+                             ED    +A 
Sbjct: 74  DLDDVPDQDDSEIDEELRSFREKLR--------------------------EDKKNESAA 107

Query: 87  KYAGKLGGDEKYIDNSGCSSDDSDEELDV 1
           KY GKLGGDE +ID+S   S+DSDEELDV
Sbjct: 108 KYNGKLGGDEVFIDSSNELSEDSDEELDV 136


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