BLASTX nr result
ID: Atropa21_contig00032618
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00032618
(523 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006355118.1| PREDICTED: KH domain-containing protein At4g... 146 3e-33
ref|XP_004238815.1| PREDICTED: KH domain-containing protein At4g... 146 3e-33
gb|AAW28569.2| KH domain containing protein, putative [Solanum d... 146 3e-33
gb|AAU90323.1| KH domain containing protein [Solanum demissum] 146 3e-33
ref|XP_002272287.2| PREDICTED: KH domain-containing protein At4g... 111 9e-23
emb|CBI31941.3| unnamed protein product [Vitis vinifera] 111 9e-23
emb|CAN81693.1| hypothetical protein VITISV_009249 [Vitis vinifera] 111 9e-23
ref|XP_002283766.1| PREDICTED: KH domain-containing protein At4g... 103 2e-20
ref|XP_006363406.1| PREDICTED: KH domain-containing protein At4g... 101 9e-20
gb|EXB31947.1| KH domain-containing protein [Morus notabilis] 100 2e-19
gb|EOY03515.1| RNA-binding KH domain-containing protein isoform ... 100 2e-19
gb|EOY03514.1| RNA-binding KH domain-containing protein isoform ... 100 2e-19
gb|EOY03512.1| RNA-binding KH domain-containing protein isoform ... 100 2e-19
gb|EOY03508.1| RNA-binding KH domain-containing protein isoform ... 100 2e-19
gb|EOY03507.1| RNA-binding KH domain-containing protein isoform ... 100 2e-19
ref|XP_004170802.1| PREDICTED: KH domain-containing protein At4g... 99 8e-19
ref|XP_004141445.1| PREDICTED: KH domain-containing protein At4g... 99 8e-19
ref|XP_006438721.1| hypothetical protein CICLE_v10031267mg [Citr... 98 1e-18
ref|XP_004233368.1| PREDICTED: KH domain-containing protein At4g... 98 1e-18
ref|XP_006482620.1| PREDICTED: KH domain-containing protein At4g... 97 2e-18
>ref|XP_006355118.1| PREDICTED: KH domain-containing protein At4g18375-like isoform X1
[Solanum tuberosum] gi|565377291|ref|XP_006355119.1|
PREDICTED: KH domain-containing protein At4g18375-like
isoform X2 [Solanum tuberosum]
Length = 533
Score = 146 bits (368), Expect = 3e-33
Identities = 68/79 (86%), Positives = 77/79 (97%)
Frame = +1
Query: 286 GQRNNFGKRMQSGSDHPRNDGSRRRTPTDEKDSHAVGPEDTVFRYLCPTGKIGSVIGVGG 465
GQRNN+GKRMQS SD+ R+DGS+RRTPTDEK+S+++GPEDTVFRYLCPTGKIGS+IGVGG
Sbjct: 3 GQRNNYGKRMQSESDYSRSDGSKRRTPTDEKESNSIGPEDTVFRYLCPTGKIGSIIGVGG 62
Query: 466 DIAKQLRTETNSKIRISET 522
DIAKQLRTETNSKIRISET
Sbjct: 63 DIAKQLRTETNSKIRISET 81
>ref|XP_004238815.1| PREDICTED: KH domain-containing protein At4g18375-like [Solanum
lycopersicum]
Length = 532
Score = 146 bits (368), Expect = 3e-33
Identities = 68/79 (86%), Positives = 77/79 (97%)
Frame = +1
Query: 286 GQRNNFGKRMQSGSDHPRNDGSRRRTPTDEKDSHAVGPEDTVFRYLCPTGKIGSVIGVGG 465
GQRNN+GKRMQS SD+ R+DGS+RRTPTDEK+S+++GPEDTVFRYLCPTGKIGS+IGVGG
Sbjct: 3 GQRNNYGKRMQSESDYSRSDGSKRRTPTDEKESNSIGPEDTVFRYLCPTGKIGSIIGVGG 62
Query: 466 DIAKQLRTETNSKIRISET 522
DIAKQLRTETNSKIRISET
Sbjct: 63 DIAKQLRTETNSKIRISET 81
>gb|AAW28569.2| KH domain containing protein, putative [Solanum demissum]
Length = 600
Score = 146 bits (368), Expect = 3e-33
Identities = 68/79 (86%), Positives = 77/79 (97%)
Frame = +1
Query: 286 GQRNNFGKRMQSGSDHPRNDGSRRRTPTDEKDSHAVGPEDTVFRYLCPTGKIGSVIGVGG 465
GQRNN+GKRMQS SD+ R+DGS+RRTPTDEK+S+++GPEDTVFRYLCPTGKIGS+IGVGG
Sbjct: 3 GQRNNYGKRMQSESDYSRSDGSKRRTPTDEKESNSIGPEDTVFRYLCPTGKIGSIIGVGG 62
Query: 466 DIAKQLRTETNSKIRISET 522
DIAKQLRTETNSKIRISET
Sbjct: 63 DIAKQLRTETNSKIRISET 81
>gb|AAU90323.1| KH domain containing protein [Solanum demissum]
Length = 533
Score = 146 bits (368), Expect = 3e-33
Identities = 68/79 (86%), Positives = 77/79 (97%)
Frame = +1
Query: 286 GQRNNFGKRMQSGSDHPRNDGSRRRTPTDEKDSHAVGPEDTVFRYLCPTGKIGSVIGVGG 465
GQRNN+GKRMQS SD+ R+DGS+RRTPTDEK+S+++GPEDTVFRYLCPTGKIGS+IGVGG
Sbjct: 3 GQRNNYGKRMQSESDYSRSDGSKRRTPTDEKESNSIGPEDTVFRYLCPTGKIGSIIGVGG 62
Query: 466 DIAKQLRTETNSKIRISET 522
DIAKQLRTETNSKIRISET
Sbjct: 63 DIAKQLRTETNSKIRISET 81
>ref|XP_002272287.2| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
Length = 517
Score = 111 bits (278), Expect = 9e-23
Identities = 52/79 (65%), Positives = 62/79 (78%)
Frame = +1
Query: 286 GQRNNFGKRMQSGSDHPRNDGSRRRTPTDEKDSHAVGPEDTVFRYLCPTGKIGSVIGVGG 465
GQRN++GKR S SD+ N GS+RR P D+K+ H +G EDTV+RYLCP KIGS+IG GG
Sbjct: 3 GQRNDYGKRSHSQSDYGGNGGSKRRNPGDDKEQHGIGVEDTVYRYLCPVRKIGSIIGRGG 62
Query: 466 DIAKQLRTETNSKIRISET 522
DIAKQLR+ET S IRI ET
Sbjct: 63 DIAKQLRSETKSNIRIGET 81
>emb|CBI31941.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 111 bits (278), Expect = 9e-23
Identities = 52/79 (65%), Positives = 62/79 (78%)
Frame = +1
Query: 286 GQRNNFGKRMQSGSDHPRNDGSRRRTPTDEKDSHAVGPEDTVFRYLCPTGKIGSVIGVGG 465
GQRN++GKR S SD+ N GS+RR P D+K+ H +G EDTV+RYLCP KIGS+IG GG
Sbjct: 69 GQRNDYGKRSHSQSDYGGNGGSKRRNPGDDKEQHGIGVEDTVYRYLCPVRKIGSIIGRGG 128
Query: 466 DIAKQLRTETNSKIRISET 522
DIAKQLR+ET S IRI ET
Sbjct: 129 DIAKQLRSETKSNIRIGET 147
>emb|CAN81693.1| hypothetical protein VITISV_009249 [Vitis vinifera]
Length = 543
Score = 111 bits (278), Expect = 9e-23
Identities = 52/79 (65%), Positives = 62/79 (78%)
Frame = +1
Query: 286 GQRNNFGKRMQSGSDHPRNDGSRRRTPTDEKDSHAVGPEDTVFRYLCPTGKIGSVIGVGG 465
GQRN++GKR S SD+ N GS+RR P D+K+ H +G EDTV+RYLCP KIGS+IG GG
Sbjct: 3 GQRNDYGKRSHSQSDYGGNGGSKRRNPGDDKEQHGIGVEDTVYRYLCPVRKIGSIIGRGG 62
Query: 466 DIAKQLRTETNSKIRISET 522
DIAKQLR+ET S IRI ET
Sbjct: 63 DIAKQLRSETKSNIRIGET 81
>ref|XP_002283766.1| PREDICTED: KH domain-containing protein At4g18375 [Vitis vinifera]
gi|296082939|emb|CBI22240.3| unnamed protein product
[Vitis vinifera]
Length = 548
Score = 103 bits (258), Expect = 2e-20
Identities = 48/79 (60%), Positives = 60/79 (75%)
Frame = +1
Query: 286 GQRNNFGKRMQSGSDHPRNDGSRRRTPTDEKDSHAVGPEDTVFRYLCPTGKIGSVIGVGG 465
GQRN++GKR S SD+ N G++RR P D++D + PEDTV+RYLCP KIGS+IG GG
Sbjct: 3 GQRNSYGKRAHSQSDYGDNGGNKRRNPGDDRDPFTIEPEDTVYRYLCPGRKIGSIIGRGG 62
Query: 466 DIAKQLRTETNSKIRISET 522
+I KQLR +T SKIRI ET
Sbjct: 63 EIVKQLRVDTKSKIRIGET 81
>ref|XP_006363406.1| PREDICTED: KH domain-containing protein At4g18375-like [Solanum
tuberosum]
Length = 555
Score = 101 bits (252), Expect = 9e-20
Identities = 45/79 (56%), Positives = 61/79 (77%)
Frame = +1
Query: 286 GQRNNFGKRMQSGSDHPRNDGSRRRTPTDEKDSHAVGPEDTVFRYLCPTGKIGSVIGVGG 465
G+R+++GKR S SD+ N G++RR ++KD ++GP+DTV+RYLCP KIGS+IG GG
Sbjct: 3 GRRDSYGKRSHSQSDYSENGGNKRRNTRNDKDPFSIGPDDTVYRYLCPVKKIGSIIGKGG 62
Query: 466 DIAKQLRTETNSKIRISET 522
+I KQLR +T SKIRI ET
Sbjct: 63 EIVKQLRVDTKSKIRIGET 81
>gb|EXB31947.1| KH domain-containing protein [Morus notabilis]
Length = 667
Score = 100 bits (250), Expect = 2e-19
Identities = 46/79 (58%), Positives = 58/79 (73%)
Frame = +1
Query: 286 GQRNNFGKRMQSGSDHPRNDGSRRRTPTDEKDSHAVGPEDTVFRYLCPTGKIGSVIGVGG 465
GQRN++GKR S SD+ N G +RR P +E++ + EDTV+RYLCP KIGS+IG GG
Sbjct: 3 GQRNSYGKRAHSQSDYSENGGHKRRNPGEEREQFVIDSEDTVYRYLCPVKKIGSIIGRGG 62
Query: 466 DIAKQLRTETNSKIRISET 522
+I KQLR +T SKIRI ET
Sbjct: 63 EIVKQLRVDTKSKIRIGET 81
>gb|EOY03515.1| RNA-binding KH domain-containing protein isoform 9, partial
[Theobroma cacao]
Length = 526
Score = 100 bits (250), Expect = 2e-19
Identities = 46/79 (58%), Positives = 58/79 (73%)
Frame = +1
Query: 286 GQRNNFGKRMQSGSDHPRNDGSRRRTPTDEKDSHAVGPEDTVFRYLCPTGKIGSVIGVGG 465
GQRN++GKR S SD+ N ++RR P D+++ + EDTV+RYLCP KIGS+IG GG
Sbjct: 3 GQRNSYGKRAHSQSDYSENGSNKRRNPGDDREQFVIDSEDTVYRYLCPVRKIGSIIGRGG 62
Query: 466 DIAKQLRTETNSKIRISET 522
+I KQLR ET SKIRI ET
Sbjct: 63 EIVKQLRAETKSKIRIGET 81
>gb|EOY03514.1| RNA-binding KH domain-containing protein isoform 8, partial
[Theobroma cacao]
Length = 537
Score = 100 bits (250), Expect = 2e-19
Identities = 46/79 (58%), Positives = 58/79 (73%)
Frame = +1
Query: 286 GQRNNFGKRMQSGSDHPRNDGSRRRTPTDEKDSHAVGPEDTVFRYLCPTGKIGSVIGVGG 465
GQRN++GKR S SD+ N ++RR P D+++ + EDTV+RYLCP KIGS+IG GG
Sbjct: 3 GQRNSYGKRAHSQSDYSENGSNKRRNPGDDREQFVIDSEDTVYRYLCPVRKIGSIIGRGG 62
Query: 466 DIAKQLRTETNSKIRISET 522
+I KQLR ET SKIRI ET
Sbjct: 63 EIVKQLRAETKSKIRIGET 81
>gb|EOY03512.1| RNA-binding KH domain-containing protein isoform 6 [Theobroma
cacao] gi|508711616|gb|EOY03513.1| RNA-binding KH
domain-containing protein isoform 6 [Theobroma cacao]
Length = 548
Score = 100 bits (250), Expect = 2e-19
Identities = 46/79 (58%), Positives = 58/79 (73%)
Frame = +1
Query: 286 GQRNNFGKRMQSGSDHPRNDGSRRRTPTDEKDSHAVGPEDTVFRYLCPTGKIGSVIGVGG 465
GQRN++GKR S SD+ N ++RR P D+++ + EDTV+RYLCP KIGS+IG GG
Sbjct: 3 GQRNSYGKRAHSQSDYSENGSNKRRNPGDDREQFVIDSEDTVYRYLCPVRKIGSIIGRGG 62
Query: 466 DIAKQLRTETNSKIRISET 522
+I KQLR ET SKIRI ET
Sbjct: 63 EIVKQLRAETKSKIRIGET 81
>gb|EOY03508.1| RNA-binding KH domain-containing protein isoform 2 [Theobroma
cacao]
Length = 542
Score = 100 bits (250), Expect = 2e-19
Identities = 46/79 (58%), Positives = 58/79 (73%)
Frame = +1
Query: 286 GQRNNFGKRMQSGSDHPRNDGSRRRTPTDEKDSHAVGPEDTVFRYLCPTGKIGSVIGVGG 465
GQRN++GKR S SD+ N ++RR P D+++ + EDTV+RYLCP KIGS+IG GG
Sbjct: 3 GQRNSYGKRAHSQSDYSENGSNKRRNPGDDREQFVIDSEDTVYRYLCPVRKIGSIIGRGG 62
Query: 466 DIAKQLRTETNSKIRISET 522
+I KQLR ET SKIRI ET
Sbjct: 63 EIVKQLRAETKSKIRIGET 81
>gb|EOY03507.1| RNA-binding KH domain-containing protein isoform 1 [Theobroma
cacao] gi|508711612|gb|EOY03509.1| RNA-binding KH
domain-containing protein isoform 1 [Theobroma cacao]
gi|508711614|gb|EOY03511.1| RNA-binding KH
domain-containing protein isoform 1 [Theobroma cacao]
Length = 547
Score = 100 bits (250), Expect = 2e-19
Identities = 46/79 (58%), Positives = 58/79 (73%)
Frame = +1
Query: 286 GQRNNFGKRMQSGSDHPRNDGSRRRTPTDEKDSHAVGPEDTVFRYLCPTGKIGSVIGVGG 465
GQRN++GKR S SD+ N ++RR P D+++ + EDTV+RYLCP KIGS+IG GG
Sbjct: 3 GQRNSYGKRAHSQSDYSENGSNKRRNPGDDREQFVIDSEDTVYRYLCPVRKIGSIIGRGG 62
Query: 466 DIAKQLRTETNSKIRISET 522
+I KQLR ET SKIRI ET
Sbjct: 63 EIVKQLRAETKSKIRIGET 81
>ref|XP_004170802.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 546
Score = 98.6 bits (244), Expect = 8e-19
Identities = 46/79 (58%), Positives = 59/79 (74%)
Frame = +1
Query: 286 GQRNNFGKRMQSGSDHPRNDGSRRRTPTDEKDSHAVGPEDTVFRYLCPTGKIGSVIGVGG 465
GQRN++GKR S SD+ N G++RR+ +++D + EDTV+RYLCP KIGSVIG GG
Sbjct: 3 GQRNSYGKRNHSQSDYSENGGNKRRSHGEDRDQFVIDSEDTVYRYLCPVKKIGSVIGRGG 62
Query: 466 DIAKQLRTETNSKIRISET 522
+I KQLR +T SKIRI ET
Sbjct: 63 EIVKQLRIDTKSKIRIGET 81
>ref|XP_004141445.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 545
Score = 98.6 bits (244), Expect = 8e-19
Identities = 46/79 (58%), Positives = 59/79 (74%)
Frame = +1
Query: 286 GQRNNFGKRMQSGSDHPRNDGSRRRTPTDEKDSHAVGPEDTVFRYLCPTGKIGSVIGVGG 465
GQRN++GKR S SD+ N G++RR+ +++D + EDTV+RYLCP KIGSVIG GG
Sbjct: 3 GQRNSYGKRNHSQSDYSENGGNKRRSHGEDRDQFVIDSEDTVYRYLCPVKKIGSVIGRGG 62
Query: 466 DIAKQLRTETNSKIRISET 522
+I KQLR +T SKIRI ET
Sbjct: 63 EIVKQLRIDTKSKIRIGET 81
>ref|XP_006438721.1| hypothetical protein CICLE_v10031267mg [Citrus clementina]
gi|567892403|ref|XP_006438722.1| hypothetical protein
CICLE_v10031267mg [Citrus clementina]
gi|568859195|ref|XP_006483127.1| PREDICTED: KH
domain-containing protein At4g18375-like isoform X1
[Citrus sinensis] gi|568859197|ref|XP_006483128.1|
PREDICTED: KH domain-containing protein At4g18375-like
isoform X2 [Citrus sinensis]
gi|568859199|ref|XP_006483129.1| PREDICTED: KH
domain-containing protein At4g18375-like isoform X3
[Citrus sinensis] gi|568859201|ref|XP_006483130.1|
PREDICTED: KH domain-containing protein At4g18375-like
isoform X4 [Citrus sinensis] gi|557540917|gb|ESR51961.1|
hypothetical protein CICLE_v10031267mg [Citrus
clementina] gi|557540918|gb|ESR51962.1| hypothetical
protein CICLE_v10031267mg [Citrus clementina]
Length = 512
Score = 98.2 bits (243), Expect = 1e-18
Identities = 49/80 (61%), Positives = 57/80 (71%), Gaps = 1/80 (1%)
Frame = +1
Query: 286 GQRN-NFGKRMQSGSDHPRNDGSRRRTPTDEKDSHAVGPEDTVFRYLCPTGKIGSVIGVG 462
GQ N N+GKR SD N GS+RR P DE + +G EDTV+RYLCP KIGS+IG G
Sbjct: 3 GQSNINYGKRTHFQSDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKG 62
Query: 463 GDIAKQLRTETNSKIRISET 522
G+I KQLR+ET S IRISET
Sbjct: 63 GEIVKQLRSETKSNIRISET 82
>ref|XP_004233368.1| PREDICTED: KH domain-containing protein At4g18375-like [Solanum
lycopersicum]
Length = 555
Score = 98.2 bits (243), Expect = 1e-18
Identities = 44/79 (55%), Positives = 60/79 (75%)
Frame = +1
Query: 286 GQRNNFGKRMQSGSDHPRNDGSRRRTPTDEKDSHAVGPEDTVFRYLCPTGKIGSVIGVGG 465
G+R+++GKR S SD+ N G++RR ++KD ++GP+DTV+RYLC KIGS+IG GG
Sbjct: 3 GRRDSYGKRSHSQSDYGENGGNKRRNTRNDKDPFSIGPDDTVYRYLCSVKKIGSIIGKGG 62
Query: 466 DIAKQLRTETNSKIRISET 522
+I KQLR +T SKIRI ET
Sbjct: 63 EIVKQLRVDTKSKIRIGET 81
>ref|XP_006482620.1| PREDICTED: KH domain-containing protein At4g18375-like isoform X1
[Citrus sinensis] gi|568858155|ref|XP_006482621.1|
PREDICTED: KH domain-containing protein At4g18375-like
isoform X2 [Citrus sinensis]
gi|568858160|ref|XP_006482622.1| PREDICTED: KH
domain-containing protein At4g18375-like isoform X3
[Citrus sinensis]
Length = 546
Score = 97.4 bits (241), Expect = 2e-18
Identities = 45/79 (56%), Positives = 59/79 (74%)
Frame = +1
Query: 286 GQRNNFGKRMQSGSDHPRNDGSRRRTPTDEKDSHAVGPEDTVFRYLCPTGKIGSVIGVGG 465
GQRN++GKR S +D+ + ++RR D++D +GPEDTV+RYLCP KIGS+IG GG
Sbjct: 3 GQRNSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGG 62
Query: 466 DIAKQLRTETNSKIRISET 522
+I KQLR +T SKIRI ET
Sbjct: 63 EIVKQLRIDTKSKIRIGET 81