BLASTX nr result

ID: Atropa21_contig00032519 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00032519
         (548 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACB45089.1| putative polyprotein [Solanum habrochaites]             50   8e-08

>gb|ACB45089.1| putative polyprotein [Solanum habrochaites]
          Length = 849

 Score = 50.1 bits (118), Expect(2) = 8e-08
 Identities = 25/55 (45%), Positives = 38/55 (69%)
 Frame = +3

Query: 381 YPLSNYMSYAALSVAYLNSVKCYSAIRELCSYVEAIKDKE*MDNVQLELQALTDN 545
           +PLS+YMSY+++S  Y  S+  +SAI E  SY EA++    +  ++LEL+AL DN
Sbjct: 648 HPLSSYMSYSSISTPYFQSLCNFSAIPEPTSYNEAVQHSHWIQAMELELKALHDN 702



 Score = 32.0 bits (71), Expect(2) = 8e-08
 Identities = 16/39 (41%), Positives = 20/39 (51%)
 Frame = +2

Query: 269 RRTTRHIKSPGWLDGFIHAPFPGYQPPDPSIASCHYPLS 385
           RR+TR  K PGWL  F+H     + P      S  +PLS
Sbjct: 615 RRSTRSSKPPGWLHDFVH--IATHSPTSSLTCSTAHPLS 651


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