BLASTX nr result

ID: Atropa21_contig00032451 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00032451
         (567 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006352543.1| PREDICTED: probable RNA polymerase II transc...    57   4e-06
ref|XP_004248296.1| PREDICTED: probable RNA polymerase II transc...    57   4e-06

>ref|XP_006352543.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1-like [Solanum tuberosum]
          Length = 599

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 27/31 (87%), Positives = 28/31 (90%), Gaps = 1/31 (3%)
 Frame = +3

Query: 45  QALLNLMQDQGG-YIFEFDSFPDRDQCRDFV 134
           QALLNL Q QGG Y+FEFDSFPDRDQCRDFV
Sbjct: 65  QALLNLTQAQGGNYLFEFDSFPDRDQCRDFV 95


>ref|XP_004248296.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1-like [Solanum lycopersicum]
          Length = 599

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 27/31 (87%), Positives = 28/31 (90%), Gaps = 1/31 (3%)
 Frame = +3

Query: 45  QALLNLMQDQGG-YIFEFDSFPDRDQCRDFV 134
           QALLNL Q QGG Y+FEFDSFPDRDQCRDFV
Sbjct: 65  QALLNLTQAQGGNYLFEFDSFPDRDQCRDFV 95


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