BLASTX nr result
ID: Atropa21_contig00032419
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00032419
(482 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004238356.1| PREDICTED: mediator of RNA polymerase II tra... 87 2e-15
gb|EXB29325.1| Putative mediator of RNA polymerase II transcript... 84 1e-14
ref|XP_004303373.1| PREDICTED: mediator of RNA polymerase II tra... 84 2e-14
ref|XP_004136548.1| PREDICTED: mediator of RNA polymerase II tra... 83 3e-14
gb|EMJ03128.1| hypothetical protein PRUPE_ppa021222mg [Prunus pe... 82 7e-14
ref|XP_002281390.1| PREDICTED: mediator of RNA polymerase II tra... 82 7e-14
gb|ESW07757.1| hypothetical protein PHAVU_010G156700g [Phaseolus... 81 1e-13
ref|XP_006429955.1| hypothetical protein CICLE_v10012936mg [Citr... 81 2e-13
gb|EOY09624.1| Mediator of RNA polymerase II transcription subun... 80 3e-13
gb|EOY09623.1| Mediator of RNA polymerase II transcription subun... 80 3e-13
gb|EOY09622.1| Mediator of RNA polymerase II transcription subun... 80 3e-13
dbj|BAF98600.1| CM0545.310.nc [Lotus japonicus] 80 3e-13
ref|XP_006582942.1| PREDICTED: uncharacterized protein LOC100812... 79 6e-13
ref|NP_001241256.1| uncharacterized protein LOC100792250 [Glycin... 79 6e-13
ref|NP_001242689.1| uncharacterized protein LOC100812231 [Glycin... 79 6e-13
gb|AFK46219.1| unknown [Medicago truncatula] 78 1e-12
ref|XP_006481684.1| PREDICTED: mediator of RNA polymerase II tra... 77 2e-12
ref|XP_002323352.1| hypothetical protein POPTR_0016s06270g [Popu... 77 2e-12
ref|XP_004487094.1| PREDICTED: mediator of RNA polymerase II tra... 77 2e-12
ref|XP_004487092.1| PREDICTED: mediator of RNA polymerase II tra... 77 2e-12
>ref|XP_004238356.1| PREDICTED: mediator of RNA polymerase II transcription subunit
7b-like [Solanum lycopersicum]
gi|565350175|ref|XP_006342049.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 7a-like [Solanum
tuberosum]
Length = 168
Score = 87.4 bits (215), Expect = 2e-15
Identities = 42/52 (80%), Positives = 44/52 (84%)
Frame = -2
Query: 157 MSTATXXXXXXXYRLYKDYLQDPKSAPEPPSPIEGTYVLFGANYTTDDVLPS 2
MSTAT YRLYKDYLQDPKSAPEPP PIEGTYVLFG+NYTTDDVLP+
Sbjct: 1 MSTATYPPPPPFYRLYKDYLQDPKSAPEPPPPIEGTYVLFGSNYTTDDVLPN 52
>gb|EXB29325.1| Putative mediator of RNA polymerase II transcription subunit 7
[Morus notabilis]
Length = 181
Score = 84.3 bits (207), Expect = 1e-14
Identities = 41/52 (78%), Positives = 42/52 (80%)
Frame = -2
Query: 157 MSTATXXXXXXXYRLYKDYLQDPKSAPEPPSPIEGTYVLFGANYTTDDVLPS 2
M+TAT YRLYKDYLQDPKSAP PP PIEGTYV FGANYTTDDVLPS
Sbjct: 1 MATATYPPPPPFYRLYKDYLQDPKSAPAPPPPIEGTYVCFGANYTTDDVLPS 52
>ref|XP_004303373.1| PREDICTED: mediator of RNA polymerase II transcription subunit
7b-like [Fragaria vesca subsp. vesca]
Length = 175
Score = 84.0 bits (206), Expect = 2e-14
Identities = 39/52 (75%), Positives = 43/52 (82%)
Frame = -2
Query: 157 MSTATXXXXXXXYRLYKDYLQDPKSAPEPPSPIEGTYVLFGANYTTDDVLPS 2
M+TAT Y+LYKDYLQDPKSAPEPP PIEGTY+ +GANYTTDDVLPS
Sbjct: 1 MATATYPPPPPYYKLYKDYLQDPKSAPEPPPPIEGTYICYGANYTTDDVLPS 52
>ref|XP_004136548.1| PREDICTED: mediator of RNA polymerase II transcription subunit
7b-like [Cucumis sativus]
Length = 168
Score = 83.2 bits (204), Expect = 3e-14
Identities = 39/52 (75%), Positives = 43/52 (82%)
Frame = -2
Query: 157 MSTATXXXXXXXYRLYKDYLQDPKSAPEPPSPIEGTYVLFGANYTTDDVLPS 2
M+TAT Y+LYKDYLQDPKSAPEPP PIEGTY+ FG+NYTTDDVLPS
Sbjct: 1 MATATYPPPPPFYKLYKDYLQDPKSAPEPPPPIEGTYMCFGSNYTTDDVLPS 52
>gb|EMJ03128.1| hypothetical protein PRUPE_ppa021222mg [Prunus persica]
Length = 173
Score = 82.0 bits (201), Expect = 7e-14
Identities = 37/52 (71%), Positives = 42/52 (80%)
Frame = -2
Query: 157 MSTATXXXXXXXYRLYKDYLQDPKSAPEPPSPIEGTYVLFGANYTTDDVLPS 2
M+TAT Y+LYKDYLQDPKSAPEPP PIEGTY+ +G NYTTDD+LPS
Sbjct: 1 MATATYPPPPPYYKLYKDYLQDPKSAPEPPPPIEGTYICYGGNYTTDDILPS 52
>ref|XP_002281390.1| PREDICTED: mediator of RNA polymerase II transcription subunit 7
[Vitis vinifera] gi|297739781|emb|CBI29963.3| unnamed
protein product [Vitis vinifera]
Length = 168
Score = 82.0 bits (201), Expect = 7e-14
Identities = 39/52 (75%), Positives = 42/52 (80%)
Frame = -2
Query: 157 MSTATXXXXXXXYRLYKDYLQDPKSAPEPPSPIEGTYVLFGANYTTDDVLPS 2
M+TAT YRLYKDY+Q+PKSAPEPP PIEGTY LFGA YTTDDVLPS
Sbjct: 1 MATATYPPPPPYYRLYKDYIQNPKSAPEPPPPIEGTYALFGATYTTDDVLPS 52
>gb|ESW07757.1| hypothetical protein PHAVU_010G156700g [Phaseolus vulgaris]
Length = 168
Score = 81.3 bits (199), Expect = 1e-13
Identities = 39/52 (75%), Positives = 41/52 (78%)
Frame = -2
Query: 157 MSTATXXXXXXXYRLYKDYLQDPKSAPEPPSPIEGTYVLFGANYTTDDVLPS 2
M+TAT YRLYK+YLQDPKSAPEPP PIEGTYV FG NYTT DVLPS
Sbjct: 1 MATATYPPPPPFYRLYKEYLQDPKSAPEPPPPIEGTYVCFGGNYTTSDVLPS 52
>ref|XP_006429955.1| hypothetical protein CICLE_v10012936mg [Citrus clementina]
gi|557532012|gb|ESR43195.1| hypothetical protein
CICLE_v10012936mg [Citrus clementina]
Length = 168
Score = 80.9 bits (198), Expect = 2e-13
Identities = 38/52 (73%), Positives = 41/52 (78%)
Frame = -2
Query: 157 MSTATXXXXXXXYRLYKDYLQDPKSAPEPPSPIEGTYVLFGANYTTDDVLPS 2
M+TA YRLYKDYLQ+PKSAPEPP PIEGTY+ FG NYTTDDVLPS
Sbjct: 1 MATAAYPPPPPYYRLYKDYLQNPKSAPEPPPPIEGTYICFGGNYTTDDVLPS 52
>gb|EOY09624.1| Mediator of RNA polymerase II transcription subunit 7 isoform 3
[Theobroma cacao]
Length = 168
Score = 80.1 bits (196), Expect = 3e-13
Identities = 38/52 (73%), Positives = 42/52 (80%)
Frame = -2
Query: 157 MSTATXXXXXXXYRLYKDYLQDPKSAPEPPSPIEGTYVLFGANYTTDDVLPS 2
M+TAT YRLYKDYLQ+PKSAPEPP PIEGTYV FG +YTTDD+LPS
Sbjct: 1 MATATYPPPPPFYRLYKDYLQNPKSAPEPPPPIEGTYVCFGGSYTTDDLLPS 52
>gb|EOY09623.1| Mediator of RNA polymerase II transcription subunit 7 isoform 2,
partial [Theobroma cacao]
Length = 185
Score = 80.1 bits (196), Expect = 3e-13
Identities = 38/52 (73%), Positives = 42/52 (80%)
Frame = -2
Query: 157 MSTATXXXXXXXYRLYKDYLQDPKSAPEPPSPIEGTYVLFGANYTTDDVLPS 2
M+TAT YRLYKDYLQ+PKSAPEPP PIEGTYV FG +YTTDD+LPS
Sbjct: 1 MATATYPPPPPFYRLYKDYLQNPKSAPEPPPPIEGTYVCFGGSYTTDDLLPS 52
>gb|EOY09622.1| Mediator of RNA polymerase II transcription subunit 7 isoform 1
[Theobroma cacao]
Length = 173
Score = 80.1 bits (196), Expect = 3e-13
Identities = 38/52 (73%), Positives = 42/52 (80%)
Frame = -2
Query: 157 MSTATXXXXXXXYRLYKDYLQDPKSAPEPPSPIEGTYVLFGANYTTDDVLPS 2
M+TAT YRLYKDYLQ+PKSAPEPP PIEGTYV FG +YTTDD+LPS
Sbjct: 1 MATATYPPPPPFYRLYKDYLQNPKSAPEPPPPIEGTYVCFGGSYTTDDLLPS 52
>dbj|BAF98600.1| CM0545.310.nc [Lotus japonicus]
Length = 168
Score = 80.1 bits (196), Expect = 3e-13
Identities = 39/52 (75%), Positives = 41/52 (78%)
Frame = -2
Query: 157 MSTATXXXXXXXYRLYKDYLQDPKSAPEPPSPIEGTYVLFGANYTTDDVLPS 2
M+TAT YRLYKDYLQ+P SAPEPP PIEGTYV FGANYTT DVLPS
Sbjct: 1 MATATYPPPPPYYRLYKDYLQNPDSAPEPPPPIEGTYVCFGANYTTSDVLPS 52
>ref|XP_006582942.1| PREDICTED: uncharacterized protein LOC100812231 isoform X1 [Glycine
max]
Length = 168
Score = 79.0 bits (193), Expect = 6e-13
Identities = 37/52 (71%), Positives = 42/52 (80%)
Frame = -2
Query: 157 MSTATXXXXXXXYRLYKDYLQDPKSAPEPPSPIEGTYVLFGANYTTDDVLPS 2
M+TAT YRLYKDYLQ+PKSAP+PP PIEGTY+ FGANYTT DVLP+
Sbjct: 1 MATATYPPPPPYYRLYKDYLQNPKSAPDPPPPIEGTYLCFGANYTTSDVLPT 52
>ref|NP_001241256.1| uncharacterized protein LOC100792250 [Glycine max]
gi|255645739|gb|ACU23363.1| unknown [Glycine max]
Length = 168
Score = 79.0 bits (193), Expect = 6e-13
Identities = 37/52 (71%), Positives = 41/52 (78%)
Frame = -2
Query: 157 MSTATXXXXXXXYRLYKDYLQDPKSAPEPPSPIEGTYVLFGANYTTDDVLPS 2
M+TAT YRLYKDYLQDP SAP+PP PIEGTY+ FGANYTT DVLP+
Sbjct: 1 MATATYPPPPPYYRLYKDYLQDPNSAPDPPPPIEGTYLCFGANYTTSDVLPT 52
>ref|NP_001242689.1| uncharacterized protein LOC100812231 [Glycine max]
gi|255640472|gb|ACU20522.1| unknown [Glycine max]
Length = 161
Score = 79.0 bits (193), Expect = 6e-13
Identities = 37/52 (71%), Positives = 42/52 (80%)
Frame = -2
Query: 157 MSTATXXXXXXXYRLYKDYLQDPKSAPEPPSPIEGTYVLFGANYTTDDVLPS 2
M+TAT YRLYKDYLQ+PKSAP+PP PIEGTY+ FGANYTT DVLP+
Sbjct: 1 MATATYPPPPPYYRLYKDYLQNPKSAPDPPPPIEGTYLCFGANYTTSDVLPT 52
>gb|AFK46219.1| unknown [Medicago truncatula]
Length = 168
Score = 77.8 bits (190), Expect = 1e-12
Identities = 36/52 (69%), Positives = 41/52 (78%)
Frame = -2
Query: 157 MSTATXXXXXXXYRLYKDYLQDPKSAPEPPSPIEGTYVLFGANYTTDDVLPS 2
M+TAT YRLYKDY+QDP+SAPEPP PIEGTY+ FG +YTT DVLPS
Sbjct: 1 MATATYPPPPPYYRLYKDYVQDPESAPEPPPPIEGTYICFGGSYTTSDVLPS 52
>ref|XP_006481684.1| PREDICTED: mediator of RNA polymerase II transcription subunit
7a-like [Citrus sinensis]
Length = 168
Score = 77.4 bits (189), Expect = 2e-12
Identities = 36/52 (69%), Positives = 40/52 (76%)
Frame = -2
Query: 157 MSTATXXXXXXXYRLYKDYLQDPKSAPEPPSPIEGTYVLFGANYTTDDVLPS 2
M+TA YRLYK+YLQ+P SAPEPP PIEGTY+ FG NYTTDDVLPS
Sbjct: 1 MATAAYPPPPPYYRLYKEYLQNPNSAPEPPPPIEGTYICFGGNYTTDDVLPS 52
>ref|XP_002323352.1| hypothetical protein POPTR_0016s06270g [Populus trichocarpa]
gi|222867982|gb|EEF05113.1| hypothetical protein
POPTR_0016s06270g [Populus trichocarpa]
Length = 168
Score = 77.4 bits (189), Expect = 2e-12
Identities = 36/52 (69%), Positives = 42/52 (80%)
Frame = -2
Query: 157 MSTATXXXXXXXYRLYKDYLQDPKSAPEPPSPIEGTYVLFGANYTTDDVLPS 2
M+TAT YRLYKDY+++PKSAPEPP PIEGTYV F ++YTTDDVLPS
Sbjct: 1 MATATFPPPPPFYRLYKDYIENPKSAPEPPPPIEGTYVCFASSYTTDDVLPS 52
>ref|XP_004487094.1| PREDICTED: mediator of RNA polymerase II transcription subunit
7a-like isoform X3 [Cicer arietinum]
Length = 168
Score = 77.0 bits (188), Expect = 2e-12
Identities = 37/52 (71%), Positives = 40/52 (76%)
Frame = -2
Query: 157 MSTATXXXXXXXYRLYKDYLQDPKSAPEPPSPIEGTYVLFGANYTTDDVLPS 2
M+TAT YRLYKDY QDP+SAPEPP PIEGTYV FG +YTT DVLPS
Sbjct: 1 MATATYPPPPPYYRLYKDYSQDPQSAPEPPPPIEGTYVCFGGSYTTSDVLPS 52
>ref|XP_004487092.1| PREDICTED: mediator of RNA polymerase II transcription subunit
7a-like isoform X1 [Cicer arietinum]
gi|502082196|ref|XP_004487093.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 7a-like isoform
X2 [Cicer arietinum]
Length = 176
Score = 77.0 bits (188), Expect = 2e-12
Identities = 37/52 (71%), Positives = 40/52 (76%)
Frame = -2
Query: 157 MSTATXXXXXXXYRLYKDYLQDPKSAPEPPSPIEGTYVLFGANYTTDDVLPS 2
M+TAT YRLYKDY QDP+SAPEPP PIEGTYV FG +YTT DVLPS
Sbjct: 1 MATATYPPPPPYYRLYKDYSQDPQSAPEPPPPIEGTYVCFGGSYTTSDVLPS 52