BLASTX nr result

ID: Atropa21_contig00032416 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00032416
         (513 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004244401.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho...   115   8e-24
ref|XP_006367294.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho...   114   1e-23
ref|XP_004238595.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho...   114   1e-23
emb|CBI38093.3| unnamed protein product [Vitis vinifera]              113   2e-23
ref|XP_002265479.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho...   113   2e-23
ref|XP_006300681.1| hypothetical protein CARUB_v10019722mg, part...   113   3e-23
ref|XP_004142129.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho...   113   3e-23
ref|XP_006423264.1| hypothetical protein CICLE_v10027820mg [Citr...   112   7e-23
ref|XP_002530492.1| cell cycle control protein cwf22, putative [...   112   7e-23
ref|XP_004162101.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-spl...   111   1e-22
ref|XP_004513404.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho...   110   1e-22
ref|XP_002887803.1| hypothetical protein ARALYDRAFT_895889 [Arab...   110   1e-22
gb|EXC36384.1| Pre-mRNA-splicing factor CWC22-like protein [Moru...   109   4e-22
gb|ESW20227.1| hypothetical protein PHAVU_006G191000g [Phaseolus...   109   4e-22
gb|ESW18300.1| hypothetical protein PHAVU_006G029300g [Phaseolus...   109   4e-22
ref|NP_178208.1| MIF4G and MA3 domain-containing protein  [Arabi...   109   4e-22
ref|XP_003530707.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho...   109   4e-22
ref|XP_006389848.1| hypothetical protein EUTSA_v10018086mg [Eutr...   108   6e-22
gb|EMJ09291.1| hypothetical protein PRUPE_ppa001342mg [Prunus pe...   108   1e-21
gb|EOX96356.1| MIF4G domain-containing protein / MA3 domain-cont...   107   2e-21

>ref|XP_004244401.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Solanum
           lycopersicum]
          Length = 920

 Score =  115 bits (287), Expect = 8e-24
 Identities = 53/57 (92%), Positives = 57/57 (100%)
 Frame = +3

Query: 3   DPTMQDSLESIFPKDNPKNTRFAINFFTSIGLGGITENLREYLKNMPRLIMEQQKPV 173
           DPTMQDSL+SIFPKDNPKNTRFAINFFTSIGLGGITENLR+YLKNMPRLIM+QQKP+
Sbjct: 821 DPTMQDSLDSIFPKDNPKNTRFAINFFTSIGLGGITENLRDYLKNMPRLIMQQQKPI 877


>ref|XP_006367294.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Solanum tuberosum]
          Length = 951

 Score =  114 bits (285), Expect = 1e-23
 Identities = 54/57 (94%), Positives = 57/57 (100%)
 Frame = +3

Query: 3    DPTMQDSLESIFPKDNPKNTRFAINFFTSIGLGGITENLREYLKNMPRLIMEQQKPV 173
            DPTMQ+SLESIFPKDNPKNTRFAINFFTSIGLGGITE+LREYLKNMPRLIM+QQKPV
Sbjct: 854  DPTMQESLESIFPKDNPKNTRFAINFFTSIGLGGITESLREYLKNMPRLIMQQQKPV 910


>ref|XP_004238595.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Solanum
           lycopersicum]
          Length = 860

 Score =  114 bits (285), Expect = 1e-23
 Identities = 54/57 (94%), Positives = 57/57 (100%)
 Frame = +3

Query: 3   DPTMQDSLESIFPKDNPKNTRFAINFFTSIGLGGITENLREYLKNMPRLIMEQQKPV 173
           DPTMQ+SLESIFPKDNPKNTRFAINFFTSIGLGGITE+LREYLKNMPRLIM+QQKPV
Sbjct: 763 DPTMQESLESIFPKDNPKNTRFAINFFTSIGLGGITESLREYLKNMPRLIMQQQKPV 819


>emb|CBI38093.3| unnamed protein product [Vitis vinifera]
          Length = 2607

 Score =  113 bits (283), Expect = 2e-23
 Identities = 53/57 (92%), Positives = 56/57 (98%)
 Frame = +3

Query: 3    DPTMQDSLESIFPKDNPKNTRFAINFFTSIGLGGITENLREYLKNMPRLIMEQQKPV 173
            DP+MQDS ESIFPKDNPKNTRF+INFFTSIGLGGITENLREYLKNMPRLIM+QQKPV
Sbjct: 2505 DPSMQDSFESIFPKDNPKNTRFSINFFTSIGLGGITENLREYLKNMPRLIMQQQKPV 2561


>ref|XP_002265479.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Vitis vinifera]
          Length = 785

 Score =  113 bits (283), Expect = 2e-23
 Identities = 53/57 (92%), Positives = 56/57 (98%)
 Frame = +3

Query: 3   DPTMQDSLESIFPKDNPKNTRFAINFFTSIGLGGITENLREYLKNMPRLIMEQQKPV 173
           DP+MQDS ESIFPKDNPKNTRF+INFFTSIGLGGITENLREYLKNMPRLIM+QQKPV
Sbjct: 683 DPSMQDSFESIFPKDNPKNTRFSINFFTSIGLGGITENLREYLKNMPRLIMQQQKPV 739


>ref|XP_006300681.1| hypothetical protein CARUB_v10019722mg, partial [Capsella rubella]
            gi|482569391|gb|EOA33579.1| hypothetical protein
            CARUB_v10019722mg, partial [Capsella rubella]
          Length = 980

 Score =  113 bits (282), Expect = 3e-23
 Identities = 54/57 (94%), Positives = 56/57 (98%)
 Frame = +3

Query: 3    DPTMQDSLESIFPKDNPKNTRFAINFFTSIGLGGITENLREYLKNMPRLIMEQQKPV 173
            DPTMQ+SLESIFPKDNPKNTRFAINFFTSIGLGGITENLREYLKNMPRLIM+QQK V
Sbjct: 880  DPTMQESLESIFPKDNPKNTRFAINFFTSIGLGGITENLREYLKNMPRLIMQQQKQV 936


>ref|XP_004142129.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Cucumis sativus]
          Length = 797

 Score =  113 bits (282), Expect = 3e-23
 Identities = 52/57 (91%), Positives = 56/57 (98%)
 Frame = +3

Query: 3   DPTMQDSLESIFPKDNPKNTRFAINFFTSIGLGGITENLREYLKNMPRLIMEQQKPV 173
           DPTMQDS ESIFP+DNPKNTRF+INFFTSIGLGG+TENLREYLKNMPRLIM+QQKPV
Sbjct: 696 DPTMQDSFESIFPRDNPKNTRFSINFFTSIGLGGLTENLREYLKNMPRLIMQQQKPV 752


>ref|XP_006423264.1| hypothetical protein CICLE_v10027820mg [Citrus clementina]
           gi|568867638|ref|XP_006487141.1| PREDICTED:
           pre-mRNA-splicing factor CWC22 homolog [Citrus sinensis]
           gi|557525198|gb|ESR36504.1| hypothetical protein
           CICLE_v10027820mg [Citrus clementina]
          Length = 832

 Score =  112 bits (279), Expect = 7e-23
 Identities = 53/57 (92%), Positives = 55/57 (96%)
 Frame = +3

Query: 3   DPTMQDSLESIFPKDNPKNTRFAINFFTSIGLGGITENLREYLKNMPRLIMEQQKPV 173
           DPTMQDS ESIFP+DNPKNTRFAINFFTSIGLGGITENLREYLKNMPRLIM+QQK V
Sbjct: 724 DPTMQDSFESIFPRDNPKNTRFAINFFTSIGLGGITENLREYLKNMPRLIMQQQKQV 780


>ref|XP_002530492.1| cell cycle control protein cwf22, putative [Ricinus communis]
           gi|223529949|gb|EEF31876.1| cell cycle control protein
           cwf22, putative [Ricinus communis]
          Length = 810

 Score =  112 bits (279), Expect = 7e-23
 Identities = 52/57 (91%), Positives = 55/57 (96%)
 Frame = +3

Query: 3   DPTMQDSLESIFPKDNPKNTRFAINFFTSIGLGGITENLREYLKNMPRLIMEQQKPV 173
           DP MQDS ESIFP+DNPKNTRF+INFFTSIGLGGITENLREYLKNMPRLIM+QQKPV
Sbjct: 655 DPNMQDSFESIFPRDNPKNTRFSINFFTSIGLGGITENLREYLKNMPRLIMQQQKPV 711


>ref|XP_004162101.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-splicing factor CWC22
           homolog, partial [Cucumis sativus]
          Length = 780

 Score =  111 bits (277), Expect = 1e-22
 Identities = 51/57 (89%), Positives = 55/57 (96%)
 Frame = +3

Query: 3   DPTMQDSLESIFPKDNPKNTRFAINFFTSIGLGGITENLREYLKNMPRLIMEQQKPV 173
           DPTMQDS ESIFP+DNPKNTRF+INFFTSIGLGG+TENLREY KNMPRLIM+QQKPV
Sbjct: 696 DPTMQDSFESIFPRDNPKNTRFSINFFTSIGLGGLTENLREYXKNMPRLIMQQQKPV 752


>ref|XP_004513404.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Cicer arietinum]
          Length = 803

 Score =  110 bits (276), Expect = 1e-22
 Identities = 52/57 (91%), Positives = 54/57 (94%)
 Frame = +3

Query: 3   DPTMQDSLESIFPKDNPKNTRFAINFFTSIGLGGITENLREYLKNMPRLIMEQQKPV 173
           DPTMQDS ESIFPKDNPKNTRF INFFTSIGLGG+TENLREYLKNMPRLIM+QQK V
Sbjct: 703 DPTMQDSFESIFPKDNPKNTRFCINFFTSIGLGGLTENLREYLKNMPRLIMQQQKQV 759


>ref|XP_002887803.1| hypothetical protein ARALYDRAFT_895889 [Arabidopsis lyrata subsp.
           lyrata] gi|297333644|gb|EFH64062.1| hypothetical protein
           ARALYDRAFT_895889 [Arabidopsis lyrata subsp. lyrata]
          Length = 897

 Score =  110 bits (276), Expect = 1e-22
 Identities = 53/57 (92%), Positives = 55/57 (96%)
 Frame = +3

Query: 3   DPTMQDSLESIFPKDNPKNTRFAINFFTSIGLGGITENLREYLKNMPRLIMEQQKPV 173
           DPTMQ+SLESIFPKDNPKNTRFAINFFTSIGLGGITENLREYLKNMP LIM+QQK V
Sbjct: 797 DPTMQESLESIFPKDNPKNTRFAINFFTSIGLGGITENLREYLKNMPSLIMQQQKQV 853


>gb|EXC36384.1| Pre-mRNA-splicing factor CWC22-like protein [Morus notabilis]
          Length = 850

 Score =  109 bits (272), Expect = 4e-22
 Identities = 52/57 (91%), Positives = 54/57 (94%)
 Frame = +3

Query: 3   DPTMQDSLESIFPKDNPKNTRFAINFFTSIGLGGITENLREYLKNMPRLIMEQQKPV 173
           DP+MQDS ESIFPKDNPKNTRFAINFFTSIGLGGITENLREYLKNMP LIM+QQK V
Sbjct: 747 DPSMQDSFESIFPKDNPKNTRFAINFFTSIGLGGITENLREYLKNMPNLIMQQQKHV 803


>gb|ESW20227.1| hypothetical protein PHAVU_006G191000g [Phaseolus vulgaris]
          Length = 649

 Score =  109 bits (272), Expect = 4e-22
 Identities = 51/57 (89%), Positives = 54/57 (94%)
 Frame = +3

Query: 3   DPTMQDSLESIFPKDNPKNTRFAINFFTSIGLGGITENLREYLKNMPRLIMEQQKPV 173
           DPTMQ+S ESIFPKDNPKNTRF INFFTSIGLGG+TENLREYLKNMPRLIM+QQK V
Sbjct: 549 DPTMQESFESIFPKDNPKNTRFCINFFTSIGLGGLTENLREYLKNMPRLIMQQQKQV 605


>gb|ESW18300.1| hypothetical protein PHAVU_006G029300g [Phaseolus vulgaris]
          Length = 866

 Score =  109 bits (272), Expect = 4e-22
 Identities = 51/57 (89%), Positives = 54/57 (94%)
 Frame = +3

Query: 3   DPTMQDSLESIFPKDNPKNTRFAINFFTSIGLGGITENLREYLKNMPRLIMEQQKPV 173
           DPTMQ+S ESIFPKDNPKNTRF INFFTSIGLGG+TENLREYLKNMPRLIM+QQK V
Sbjct: 764 DPTMQESFESIFPKDNPKNTRFCINFFTSIGLGGLTENLREYLKNMPRLIMQQQKQV 820


>ref|NP_178208.1| MIF4G and MA3 domain-containing protein  [Arabidopsis thaliana]
           gi|6503305|gb|AAF14681.1|AC011713_29 Contains similarity
           to gb|U19615 LET 858 gene from Caenorhabditis elegans.
           ESTs gb|AI995150, gb|H76674 and gb|R84035 come from this
           gene [Arabidopsis thaliana] gi|22654971|gb|AAM98078.1|
           At1g80930/F23A5_23 [Arabidopsis thaliana]
           gi|28416525|gb|AAO42793.1| At1g80930/F23A5_23
           [Arabidopsis thaliana] gi|332198347|gb|AEE36468.1| MIF4G
           and MA3 domain-containing protein [Arabidopsis thaliana]
          Length = 900

 Score =  109 bits (272), Expect = 4e-22
 Identities = 52/57 (91%), Positives = 55/57 (96%)
 Frame = +3

Query: 3   DPTMQDSLESIFPKDNPKNTRFAINFFTSIGLGGITENLREYLKNMPRLIMEQQKPV 173
           DPTMQ+SLESIFPKDNPKNTRFAINFFTSIGLGGITENLREYLKNMP LIM++QK V
Sbjct: 800 DPTMQESLESIFPKDNPKNTRFAINFFTSIGLGGITENLREYLKNMPSLIMQRQKQV 856


>ref|XP_003530707.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog isoform X1
           [Glycine max] gi|571473788|ref|XP_006586031.1|
           PREDICTED: pre-mRNA-splicing factor CWC22 homolog
           isoform X2 [Glycine max]
          Length = 871

 Score =  109 bits (272), Expect = 4e-22
 Identities = 51/57 (89%), Positives = 54/57 (94%)
 Frame = +3

Query: 3   DPTMQDSLESIFPKDNPKNTRFAINFFTSIGLGGITENLREYLKNMPRLIMEQQKPV 173
           DPTMQ+S ESIFPKDNPKNTRF INFFTSIGLGG+TENLREYLKNMPRLIM+QQK V
Sbjct: 773 DPTMQESFESIFPKDNPKNTRFCINFFTSIGLGGLTENLREYLKNMPRLIMQQQKQV 829


>ref|XP_006389848.1| hypothetical protein EUTSA_v10018086mg [Eutrema salsugineum]
            gi|557086282|gb|ESQ27134.1| hypothetical protein
            EUTSA_v10018086mg [Eutrema salsugineum]
          Length = 935

 Score =  108 bits (271), Expect = 6e-22
 Identities = 52/57 (91%), Positives = 55/57 (96%)
 Frame = +3

Query: 3    DPTMQDSLESIFPKDNPKNTRFAINFFTSIGLGGITENLREYLKNMPRLIMEQQKPV 173
            DP MQ+SLESIFPKDNPKNTRFAINFFTSIGLGGITE+LREYLKNMPRLIM+QQK V
Sbjct: 833  DPIMQESLESIFPKDNPKNTRFAINFFTSIGLGGITESLREYLKNMPRLIMQQQKQV 889


>gb|EMJ09291.1| hypothetical protein PRUPE_ppa001342mg [Prunus persica]
          Length = 849

 Score =  108 bits (269), Expect = 1e-21
 Identities = 51/57 (89%), Positives = 55/57 (96%)
 Frame = +3

Query: 3   DPTMQDSLESIFPKDNPKNTRFAINFFTSIGLGGITENLREYLKNMPRLIMEQQKPV 173
           DP+MQDS +SIFPKDNPKNTRFAINFFTSIGLGGITENLREYLK+MPRLIM+QQK V
Sbjct: 739 DPSMQDSYDSIFPKDNPKNTRFAINFFTSIGLGGITENLREYLKHMPRLIMQQQKAV 795


>gb|EOX96356.1| MIF4G domain-containing protein / MA3 domain-containing protein
           isoform 6 [Theobroma cacao]
          Length = 855

 Score =  107 bits (266), Expect = 2e-21
 Identities = 50/55 (90%), Positives = 53/55 (96%)
 Frame = +3

Query: 3   DPTMQDSLESIFPKDNPKNTRFAINFFTSIGLGGITENLREYLKNMPRLIMEQQK 167
           DPTM DS ESIFP+DNPKNTRF+INFFTSIGLGGITENLREYLKNMPRLIM+QQK
Sbjct: 748 DPTMLDSFESIFPRDNPKNTRFSINFFTSIGLGGITENLREYLKNMPRLIMQQQK 802


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