BLASTX nr result
ID: Atropa21_contig00032413
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00032413
(719 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006349130.1| PREDICTED: pentatricopeptide repeat-containi... 322 1e-93
ref|XP_004251011.1| PREDICTED: pentatricopeptide repeat-containi... 307 3e-91
gb|EOX98179.1| Pentatricopeptide repeat-containing protein isofo... 254 6e-69
gb|EOX98180.1| Endonucleases isoform 2 [Theobroma cacao] 254 6e-69
ref|XP_002281969.1| PREDICTED: pentatricopeptide repeat-containi... 250 1e-65
emb|CBI32449.3| unnamed protein product [Vitis vinifera] 250 1e-65
ref|XP_004292454.1| PREDICTED: pentatricopeptide repeat-containi... 247 6e-65
gb|EMJ02612.1| hypothetical protein PRUPE_ppa001679mg [Prunus pe... 241 3e-64
ref|XP_002313087.2| hypothetical protein POPTR_0009s11000g [Popu... 241 1e-63
ref|XP_006480143.1| PREDICTED: pentatricopeptide repeat-containi... 231 1e-63
ref|XP_006423076.1| hypothetical protein CICLE_v10027854mg [Citr... 230 2e-62
gb|EXB63557.1| Pentatricopeptide repeat-containing protein [Moru... 233 4e-59
ref|XP_002521838.1| pentatricopeptide repeat-containing protein,... 233 5e-59
ref|XP_006296983.1| hypothetical protein CARUB_v10012977mg, part... 229 9e-58
ref|XP_003607061.1| Pentatricopeptide repeat-containing protein,... 228 1e-57
ref|XP_003588289.1| Pentatricopeptide repeat-containing protein ... 228 1e-57
ref|XP_002885984.1| hypothetical protein ARALYDRAFT_343169 [Arab... 224 2e-56
ref|XP_006409500.1| hypothetical protein EUTSA_v10022548mg [Eutr... 224 2e-56
ref|XP_004152074.1| PREDICTED: pentatricopeptide repeat-containi... 224 2e-56
ref|XP_004171087.1| PREDICTED: pentatricopeptide repeat-containi... 223 4e-56
>ref|XP_006349130.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15820-like, partial [Solanum tuberosum]
Length = 813
Score = 322 bits (826), Expect(2) = 1e-93
Identities = 159/192 (82%), Positives = 171/192 (89%), Gaps = 7/192 (3%)
Frame = -1
Query: 719 PEQREVLTGLLLRGLQIIRSNGKRRLHAIHFEFNEESRIHSILKGHIHDKFHEWLGSH-- 546
PE+REVLTGLLL G+QI RS+G+RRLHAIH+EFNEESRIHSI K HIHD+FHEWLGSH
Sbjct: 593 PEKREVLTGLLLGGVQI-RSDGERRLHAIHYEFNEESRIHSIFKKHIHDEFHEWLGSHDM 651
Query: 545 -----ADIPSSFTTISHSYFTFYADQFWSNGRPRIPKLIHRWLSSLVVAYWYMYGGYRTS 381
ADIP+SFTTISHSYFTFYADQFW NGRP IPKLIHRWLS V+AYWYMYGGYRTS
Sbjct: 652 MVDSTADIPNSFTTISHSYFTFYADQFWPNGRPCIPKLIHRWLSPRVLAYWYMYGGYRTS 711
Query: 380 SGDILLRVKGSPECVVSIVKALKVKSLDCRVKKRGRVFWIGFLGDNATLFWKVVEPFILD 201
SGDILLRVKGS E VVSI+KALK KSL+CRVKKRGRVFWIGFLGDNAT FWKVVEPFILD
Sbjct: 712 SGDILLRVKGSSEGVVSILKALKAKSLNCRVKKRGRVFWIGFLGDNATFFWKVVEPFILD 771
Query: 200 DLNDLLIAGGDS 165
+L +LL AGGDS
Sbjct: 772 ELKELLKAGGDS 783
Score = 47.8 bits (112), Expect(2) = 1e-93
Identities = 21/22 (95%), Positives = 22/22 (100%)
Frame = -3
Query: 165 NGSLETQCINFDSGSESDEKNS 100
NGSLETQCINFDSGSE+DEKNS
Sbjct: 784 NGSLETQCINFDSGSETDEKNS 805
>ref|XP_004251011.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15820-like
[Solanum lycopersicum]
Length = 816
Score = 307 bits (787), Expect(2) = 3e-91
Identities = 154/191 (80%), Positives = 164/191 (85%), Gaps = 7/191 (3%)
Frame = -1
Query: 716 EQREVLTGLLLRGLQIIRSNGKRRLHAIHFEFNEESRIHSILKGHIHDKFHEWLGSH--- 546
EQREVLTG LL G+QI RS+ +RRLHAIH+EFNEESRIHSI K HIHD+FHEWLGSH
Sbjct: 594 EQREVLTGSLLGGVQI-RSDEERRLHAIHYEFNEESRIHSIFKRHIHDEFHEWLGSHDMM 652
Query: 545 ----ADIPSSFTTISHSYFTFYADQFWSNGRPRIPKLIHRWLSSLVVAYWYMYGGYRTSS 378
ADIPSSFTTISHS FTFYADQFW NGRP IPKLIHRWLS V+AYWYMYGGYRTSS
Sbjct: 653 VDSTADIPSSFTTISHSDFTFYADQFWPNGRPCIPKLIHRWLSPRVLAYWYMYGGYRTSS 712
Query: 377 GDILLRVKGSPECVVSIVKALKVKSLDCRVKKRGRVFWIGFLGDNATLFWKVVEPFILDD 198
GDILLRVKGS E VVSI+KALK KSL CRVK RG+VFWIGFLGDNAT FWKVVEPFI+D+
Sbjct: 713 GDILLRVKGSSEGVVSILKALKAKSLHCRVKNRGKVFWIGFLGDNATFFWKVVEPFIIDE 772
Query: 197 LNDLLIAGGDS 165
L LL AGGDS
Sbjct: 773 LKGLLKAGGDS 783
Score = 55.1 bits (131), Expect(2) = 3e-91
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = -3
Query: 165 NGSLETQCINFDSGSESDEKNSGYSDTDMS 76
NGSLETQCINFDSGSES+EKNSGY + D S
Sbjct: 784 NGSLETQCINFDSGSESNEKNSGYIEPDTS 813
>gb|EOX98179.1| Pentatricopeptide repeat-containing protein isoform 1 [Theobroma
cacao]
Length = 823
Score = 254 bits (648), Expect(2) = 6e-69
Identities = 122/193 (63%), Positives = 148/193 (76%), Gaps = 7/193 (3%)
Frame = -1
Query: 716 EQREVLTGLLLRGLQIIRSNGKRRLHAIHFEFNEESRIHSILKGHIHDKFHEWL------ 555
EQR++L GLLL GL+I S+G+R+ H I FEFN+ S HSILK HIHD++HEWL
Sbjct: 603 EQRQILVGLLLGGLKI-DSDGERKNHMIRFEFNQNSVTHSILKRHIHDQYHEWLHPSSKP 661
Query: 554 -GSHADIPSSFTTISHSYFTFYADQFWSNGRPRIPKLIHRWLSSLVVAYWYMYGGYRTSS 378
+ DIP F+TISHSYF FYADQFW G+P IPKLIHRWLS LV+AYWYMYGGY+TS
Sbjct: 662 TDGNDDIPHKFSTISHSYFGFYADQFWPRGQPVIPKLIHRWLSPLVLAYWYMYGGYKTSY 721
Query: 377 GDILLRVKGSPECVVSIVKALKVKSLDCRVKKRGRVFWIGFLGDNATLFWKVVEPFILDD 198
GDILL++KGS E V +VK LK K+L CRVK++G+V+WIGFLG N+ FWK+VEP+ILDD
Sbjct: 722 GDILLKLKGSREGVEKVVKTLKAKTLHCRVKRKGKVYWIGFLGSNSMWFWKLVEPYILDD 781
Query: 197 LNDLLIAGGDSMD 159
L D L G D+ D
Sbjct: 782 LKDFLKIGSDTTD 794
Score = 34.3 bits (77), Expect(2) = 6e-69
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = -3
Query: 159 SLETQCINFDSGSESDEKNSGYSDTD 82
++E+Q INFDS S+SDEK S Y + D
Sbjct: 797 AVESQDINFDSASDSDEKASDYDEDD 822
>gb|EOX98180.1| Endonucleases isoform 2 [Theobroma cacao]
Length = 621
Score = 254 bits (648), Expect(2) = 6e-69
Identities = 122/193 (63%), Positives = 148/193 (76%), Gaps = 7/193 (3%)
Frame = -1
Query: 716 EQREVLTGLLLRGLQIIRSNGKRRLHAIHFEFNEESRIHSILKGHIHDKFHEWL------ 555
EQR++L GLLL GL+I S+G+R+ H I FEFN+ S HSILK HIHD++HEWL
Sbjct: 401 EQRQILVGLLLGGLKI-DSDGERKNHMIRFEFNQNSVTHSILKRHIHDQYHEWLHPSSKP 459
Query: 554 -GSHADIPSSFTTISHSYFTFYADQFWSNGRPRIPKLIHRWLSSLVVAYWYMYGGYRTSS 378
+ DIP F+TISHSYF FYADQFW G+P IPKLIHRWLS LV+AYWYMYGGY+TS
Sbjct: 460 TDGNDDIPHKFSTISHSYFGFYADQFWPRGQPVIPKLIHRWLSPLVLAYWYMYGGYKTSY 519
Query: 377 GDILLRVKGSPECVVSIVKALKVKSLDCRVKKRGRVFWIGFLGDNATLFWKVVEPFILDD 198
GDILL++KGS E V +VK LK K+L CRVK++G+V+WIGFLG N+ FWK+VEP+ILDD
Sbjct: 520 GDILLKLKGSREGVEKVVKTLKAKTLHCRVKRKGKVYWIGFLGSNSMWFWKLVEPYILDD 579
Query: 197 LNDLLIAGGDSMD 159
L D L G D+ D
Sbjct: 580 LKDFLKIGSDTTD 592
Score = 34.3 bits (77), Expect(2) = 6e-69
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = -3
Query: 159 SLETQCINFDSGSESDEKNSGYSDTD 82
++E+Q INFDS S+SDEK S Y + D
Sbjct: 595 AVESQDINFDSASDSDEKASDYDEDD 620
>ref|XP_002281969.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15820-like
[Vitis vinifera]
Length = 823
Score = 250 bits (639), Expect(2) = 1e-65
Identities = 117/188 (62%), Positives = 147/188 (78%), Gaps = 7/188 (3%)
Frame = -1
Query: 716 EQREVLTGLLLRGLQIIRSNGKRRLHAIHFEFNEESRIHSILKGHIHDKFHEWLGSHA-- 543
EQRE+L GLLL GLQ+ S+ +R+ H I+FEFNE S HS+L+ HIH+++HEWL S +
Sbjct: 611 EQREILIGLLLGGLQM-ESDEERKNHVIYFEFNENSGAHSVLRRHIHEQYHEWLNSSSKL 669
Query: 542 -----DIPSSFTTISHSYFTFYADQFWSNGRPRIPKLIHRWLSSLVVAYWYMYGGYRTSS 378
D+P F+TISHSYF FYADQFW GRP IPKLIHRWLS V+AYWYMYGG+RTSS
Sbjct: 670 SDDNDDVPYKFSTISHSYFGFYADQFWPRGRPMIPKLIHRWLSPRVLAYWYMYGGHRTSS 729
Query: 377 GDILLRVKGSPECVVSIVKALKVKSLDCRVKKRGRVFWIGFLGDNATLFWKVVEPFILDD 198
GDILL++KGS E V +V+ LK +S+DCRVK++G VFWIG LG N+T FWK++EP+ILDD
Sbjct: 730 GDILLKLKGSREGVEKVVRTLKAQSMDCRVKRKGTVFWIGLLGSNSTWFWKLIEPYILDD 789
Query: 197 LNDLLIAG 174
+ D + AG
Sbjct: 790 VKDFVKAG 797
Score = 26.6 bits (57), Expect(2) = 1e-65
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -3
Query: 141 INFDSGSESDEKNSGYSDTDMS 76
I+F SGS++DE + YSD + S
Sbjct: 802 ISFGSGSDTDENAADYSDNENS 823
>emb|CBI32449.3| unnamed protein product [Vitis vinifera]
Length = 790
Score = 250 bits (639), Expect(2) = 1e-65
Identities = 117/188 (62%), Positives = 147/188 (78%), Gaps = 7/188 (3%)
Frame = -1
Query: 716 EQREVLTGLLLRGLQIIRSNGKRRLHAIHFEFNEESRIHSILKGHIHDKFHEWLGSHA-- 543
EQRE+L GLLL GLQ+ S+ +R+ H I+FEFNE S HS+L+ HIH+++HEWL S +
Sbjct: 578 EQREILIGLLLGGLQM-ESDEERKNHVIYFEFNENSGAHSVLRRHIHEQYHEWLNSSSKL 636
Query: 542 -----DIPSSFTTISHSYFTFYADQFWSNGRPRIPKLIHRWLSSLVVAYWYMYGGYRTSS 378
D+P F+TISHSYF FYADQFW GRP IPKLIHRWLS V+AYWYMYGG+RTSS
Sbjct: 637 SDDNDDVPYKFSTISHSYFGFYADQFWPRGRPMIPKLIHRWLSPRVLAYWYMYGGHRTSS 696
Query: 377 GDILLRVKGSPECVVSIVKALKVKSLDCRVKKRGRVFWIGFLGDNATLFWKVVEPFILDD 198
GDILL++KGS E V +V+ LK +S+DCRVK++G VFWIG LG N+T FWK++EP+ILDD
Sbjct: 697 GDILLKLKGSREGVEKVVRTLKAQSMDCRVKRKGTVFWIGLLGSNSTWFWKLIEPYILDD 756
Query: 197 LNDLLIAG 174
+ D + AG
Sbjct: 757 VKDFVKAG 764
Score = 26.6 bits (57), Expect(2) = 1e-65
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -3
Query: 141 INFDSGSESDEKNSGYSDTDMS 76
I+F SGS++DE + YSD + S
Sbjct: 769 ISFGSGSDTDENAADYSDNENS 790
>ref|XP_004292454.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15820-like
[Fragaria vesca subsp. vesca]
Length = 794
Score = 247 bits (630), Expect(2) = 6e-65
Identities = 117/193 (60%), Positives = 150/193 (77%), Gaps = 7/193 (3%)
Frame = -1
Query: 716 EQREVLTGLLLRGLQIIRSNGKRRLHAIHFEFNEESRIHSILKGHIHDKFHEWL------ 555
EQRE+L GLLL GL+I S+ R+ H I FEF+E S H++L+ HI+D++HEWL
Sbjct: 573 EQREILVGLLLGGLRI-ESDDDRKNHMIRFEFSENSSAHAVLRRHIYDQYHEWLHPSCKL 631
Query: 554 GSHAD-IPSSFTTISHSYFTFYADQFWSNGRPRIPKLIHRWLSSLVVAYWYMYGGYRTSS 378
G + + IP F++ISHSYF FYAD+FW NGR IPKL+HRWLS V+AYWYMYGGYRT+S
Sbjct: 632 GENTEHIPYKFSSISHSYFGFYADKFWPNGRQMIPKLVHRWLSPCVLAYWYMYGGYRTAS 691
Query: 377 GDILLRVKGSPECVVSIVKALKVKSLDCRVKKRGRVFWIGFLGDNATLFWKVVEPFILDD 198
GDILL++KGS E V IV+ LK +SLDC+VK++GRVFWIGFLG N+TLFWK+ EP+ILDD
Sbjct: 692 GDILLKIKGSEEGVQKIVRTLKTRSLDCKVKRKGRVFWIGFLGSNSTLFWKLTEPYILDD 751
Query: 197 LNDLLIAGGDSMD 159
L +L + G+S +
Sbjct: 752 LKQVLKSDGESSE 764
Score = 27.7 bits (60), Expect(2) = 6e-65
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -3
Query: 165 NGSLETQCINFDSGSESDEKNSGYSDTD 82
N + + +NF SGS+SDE S SD D
Sbjct: 765 NSTGSNENMNFSSGSDSDENASDNSDDD 792
>gb|EMJ02612.1| hypothetical protein PRUPE_ppa001679mg [Prunus persica]
Length = 781
Score = 241 bits (616), Expect(2) = 3e-64
Identities = 118/188 (62%), Positives = 143/188 (76%), Gaps = 7/188 (3%)
Frame = -1
Query: 716 EQREVLTGLLLRGLQIIRSNGKRRLHAIHFEFNEESRIHSILKGHIHDKFHEWLG----- 552
EQREVL G+LL GLQI S+ R+ H I FEF+E S HS+L+ H++D++HEWL
Sbjct: 558 EQREVLVGMLLGGLQI-ESDEDRKNHMIRFEFSENSSTHSLLRRHMYDQYHEWLHPSCKT 616
Query: 551 --SHADIPSSFTTISHSYFTFYADQFWSNGRPRIPKLIHRWLSSLVVAYWYMYGGYRTSS 378
S DIP +F+TISHSY FYADQFW GR IPKLIHRWL+ +AYWYMYGG+RTSS
Sbjct: 617 SESTDDIPYNFSTISHSYLGFYADQFWPKGRQVIPKLIHRWLTPCALAYWYMYGGHRTSS 676
Query: 377 GDILLRVKGSPECVVSIVKALKVKSLDCRVKKRGRVFWIGFLGDNATLFWKVVEPFILDD 198
GDILL++KG+ E V IV+ALK KSLDC+VK++GR FWIGFLG N+T FWK+VEP+ILDD
Sbjct: 677 GDILLKIKGNEEGVEKIVRALKAKSLDCKVKRKGRYFWIGFLGSNSTWFWKLVEPYILDD 736
Query: 197 LNDLLIAG 174
L LL G
Sbjct: 737 LKHLLKGG 744
Score = 30.8 bits (68), Expect(2) = 3e-64
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = -3
Query: 165 NGSLETQCINFDSGSESDEKNSGYSDTD 82
N ++ET+ INF SGS++DE S TD
Sbjct: 749 NSAVETENINFGSGSDTDENASESDHTD 776
>ref|XP_002313087.2| hypothetical protein POPTR_0009s11000g [Populus trichocarpa]
gi|550331483|gb|EEE87042.2| hypothetical protein
POPTR_0009s11000g [Populus trichocarpa]
Length = 622
Score = 241 bits (616), Expect(2) = 1e-63
Identities = 118/195 (60%), Positives = 148/195 (75%), Gaps = 9/195 (4%)
Frame = -1
Query: 716 EQREVLTGLLLRGLQIIRSNGKRRLHAIHFEFNEESRIHSILKGHIHDKFHEWL------ 555
EQRE+L GL L GLQI S+GK+ H I FEFN+ S +HSIL+ H+HD++HEWL
Sbjct: 401 EQREILVGLFLGGLQI-ESDGKK--HMIQFEFNQNSIMHSILRRHLHDQYHEWLHPSFKP 457
Query: 554 ---GSHADIPSSFTTISHSYFTFYADQFWSNGRPRIPKLIHRWLSSLVVAYWYMYGGYRT 384
DIP F TISHS F FYA+QFW G+P++PKLIHRW+S V+AYWYMYGG+RT
Sbjct: 458 SDDSDSDDIPWRFCTISHSCFDFYAEQFWPRGQPQLPKLIHRWMSPQVLAYWYMYGGHRT 517
Query: 383 SSGDILLRVKGSPECVVSIVKALKVKSLDCRVKKRGRVFWIGFLGDNATLFWKVVEPFIL 204
SSGDI+L++KGS + V +VK LK KSLDCRVK++G+VFWIGFLG +T FWK+VEP+IL
Sbjct: 518 SSGDIVLKLKGSVKGVGRVVKTLKSKSLDCRVKRKGKVFWIGFLGSVSTWFWKLVEPYIL 577
Query: 203 DDLNDLLIAGGDSMD 159
DDL DLL AG +++
Sbjct: 578 DDLKDLLKAGDPTLE 592
Score = 28.9 bits (63), Expect(2) = 1e-63
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = -3
Query: 153 ETQCINFDSGSESDEKNSGYSDTD 82
E Q +NFDSGS+ DE+ S SD D
Sbjct: 597 ELQNMNFDSGSDFDEEASEDSDMD 620
>ref|XP_006480143.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15820-like
[Citrus sinensis]
Length = 787
Score = 231 bits (589), Expect(2) = 1e-63
Identities = 110/189 (58%), Positives = 142/189 (75%), Gaps = 7/189 (3%)
Frame = -1
Query: 716 EQREVLTGLLLRGLQIIRSNGKRRLHAIHFEFNEESRIHSILKGHIHDKFHEWL------ 555
EQRE L GLLL GL I S+ KR+ H I FEFNE SR+HS+L+ +++D++HEWL
Sbjct: 570 EQRENLIGLLLGGL-CIESDEKRKRHMIRFEFNENSRMHSVLRRYLYDQYHEWLHPSFKV 628
Query: 554 -GSHADIPSSFTTISHSYFTFYADQFWSNGRPRIPKLIHRWLSSLVVAYWYMYGGYRTSS 378
+ DIP ++TISH YF FYAD+FW GR IPKLIHRWL+ +AYW+MYGG+RTS
Sbjct: 629 SDGNDDIPYKYSTISHPYFCFYADKFWPKGRLVIPKLIHRWLTPRALAYWFMYGGHRTSV 688
Query: 377 GDILLRVKGSPECVVSIVKALKVKSLDCRVKKRGRVFWIGFLGDNATLFWKVVEPFILDD 198
GDILL++K S E + + K LK +SLDCRVKK+GRVFWIGFLG N+TLFWK++EP++LD+
Sbjct: 689 GDILLKLKVSSEGIALVFKTLKARSLDCRVKKKGRVFWIGFLGSNSTLFWKLIEPYVLDE 748
Query: 197 LNDLLIAGG 171
L + L+ G
Sbjct: 749 LKEDLLNEG 757
Score = 38.9 bits (89), Expect(2) = 1e-63
Identities = 18/25 (72%), Positives = 20/25 (80%)
Frame = -3
Query: 156 LETQCINFDSGSESDEKNSGYSDTD 82
L+TQ INFD GS+SDEK S YSD D
Sbjct: 763 LDTQNINFDCGSDSDEKASDYSDDD 787
>ref|XP_006423076.1| hypothetical protein CICLE_v10027854mg [Citrus clementina]
gi|557525010|gb|ESR36316.1| hypothetical protein
CICLE_v10027854mg [Citrus clementina]
Length = 787
Score = 230 bits (587), Expect(2) = 2e-62
Identities = 112/190 (58%), Positives = 143/190 (75%), Gaps = 8/190 (4%)
Frame = -1
Query: 716 EQREVLTGLLLRGLQIIRSNGKRRLHAIHFEFNEESRIHSILKGHIHDKFHEWL------ 555
EQRE L GLLL GL I S+ KR+ H I FEFNE SR+HS+L+ +++D++HEWL
Sbjct: 570 EQRENLIGLLLGGL-CIESDEKRKRHMIRFEFNENSRMHSVLRRYLYDQYHEWLHPSFKV 628
Query: 554 --GSHADIPSSFTTISHSYFTFYADQFWSNGRPRIPKLIHRWLSSLVVAYWYMYGGYRTS 381
GS DIP ++TISH YF FYAD+FW GR IPKLIHRWL+ +AYW+MYGG+RTS
Sbjct: 629 SDGSD-DIPYKYSTISHPYFCFYADKFWPKGRLVIPKLIHRWLTPRALAYWFMYGGHRTS 687
Query: 380 SGDILLRVKGSPECVVSIVKALKVKSLDCRVKKRGRVFWIGFLGDNATLFWKVVEPFILD 201
GDILL++K S E + + K LK +SLDCRVKK+GRVFWIGFLG N+TLFWK++EP++LD
Sbjct: 688 VGDILLKLKVSSEGIALVFKTLKARSLDCRVKKKGRVFWIGFLGSNSTLFWKLIEPYVLD 747
Query: 200 DLNDLLIAGG 171
+L + L+ G
Sbjct: 748 ELKEDLLNEG 757
Score = 36.2 bits (82), Expect(2) = 2e-62
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = -3
Query: 156 LETQCINFDSGSESDEKNSGYSDTD 82
L+TQ INF GS+SDEK S YSD D
Sbjct: 763 LDTQNINFHCGSDSDEKASDYSDDD 787
>gb|EXB63557.1| Pentatricopeptide repeat-containing protein [Morus notabilis]
Length = 823
Score = 233 bits (595), Expect = 4e-59
Identities = 120/213 (56%), Positives = 145/213 (68%), Gaps = 8/213 (3%)
Frame = -1
Query: 716 EQREVLTGLLLRGLQIIRSNGKRRLHAIHFEFNEESRIHSILKGHIHDKFHEWL------ 555
EQRE+L GLLL GLQI R H I FEF+E+S HS L+ HIHD +HEWL
Sbjct: 602 EQREILVGLLLGGLQIELDENTRN-HIIRFEFSEKSGTHSSLRRHIHDLYHEWLHPSCKA 660
Query: 554 --GSHADIPSSFTTISHSYFTFYADQFWSNGRPRIPKLIHRWLSSLVVAYWYMYGGYRTS 381
GS DIP T+ H YF FYADQFW GR IPKLIHRWLS V+AYW MYGG+RTS
Sbjct: 661 NDGSE-DIPRRLFTVPHPYFGFYADQFWPKGRSAIPKLIHRWLSPCVLAYWCMYGGHRTS 719
Query: 380 SGDILLRVKGSPECVVSIVKALKVKSLDCRVKKRGRVFWIGFLGDNATLFWKVVEPFILD 201
SGDI L+++GS E V +VK+LK +SLDCRVK++GRV+WIGFLG N+T FWK+VEPF+LD
Sbjct: 720 SGDIFLKLRGSQEGVEKVVKSLKARSLDCRVKRKGRVYWIGFLGSNSTCFWKLVEPFVLD 779
Query: 200 DLNDLLIAGGDSMDP*KPNVSTLTAGRNQTRRI 102
DL D L +P V T +++T+ I
Sbjct: 780 DLRDSL----------RPGVETCGDRKSETQGI 802
>ref|XP_002521838.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223538876|gb|EEF40474.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 835
Score = 233 bits (594), Expect(2) = 5e-59
Identities = 111/200 (55%), Positives = 147/200 (73%), Gaps = 7/200 (3%)
Frame = -1
Query: 716 EQREVLTGLLLRGLQIIRSNGKRRLHAIHFEFNEESRIHSILKGHIHDKFHEWLGSHADI 537
+QRE+L GLLL GL++ S+ R+ H I FEFNE S H+IL+ H++DK+HEWL +
Sbjct: 622 DQREILVGLLLGGLRV-ESDDNRKKHMIRFEFNENSSTHAILRRHLYDKYHEWLHPSCKL 680
Query: 536 PSS-------FTTISHSYFTFYADQFWSNGRPRIPKLIHRWLSSLVVAYWYMYGGYRTSS 378
F+TISHSYF+FYA+QFW G+P IPKLIHRWLS V+A+WYMY G+RTSS
Sbjct: 681 SDGSDGASYRFSTISHSYFSFYAEQFWPKGQPMIPKLIHRWLSPQVLAFWYMYAGHRTSS 740
Query: 377 GDILLRVKGSPECVVSIVKALKVKSLDCRVKKRGRVFWIGFLGDNATLFWKVVEPFILDD 198
GDILL++KGS E V + K LK KSL+C+VK++GRVFWIGFLG+++ FWK+VEP+ILDD
Sbjct: 741 GDILLKLKGSREGVEKVFKTLKSKSLNCKVKRKGRVFWIGFLGNDSVWFWKLVEPYILDD 800
Query: 197 LNDLLIAGGDSMDP*KPNVS 138
L L AG +++ N++
Sbjct: 801 LKLFLKAGDQTLEYSAENIN 820
Score = 21.9 bits (45), Expect(2) = 5e-59
Identities = 11/17 (64%), Positives = 13/17 (76%), Gaps = 3/17 (17%)
Frame = -3
Query: 141 INFDSGSE---SDEKNS 100
INFDSGS+ SD+ NS
Sbjct: 819 INFDSGSDSEYSDDHNS 835
>ref|XP_006296983.1| hypothetical protein CARUB_v10012977mg, partial [Capsella rubella]
gi|482565692|gb|EOA29881.1| hypothetical protein
CARUB_v10012977mg, partial [Capsella rubella]
Length = 835
Score = 229 bits (583), Expect = 9e-58
Identities = 109/190 (57%), Positives = 141/190 (74%), Gaps = 5/190 (2%)
Frame = -1
Query: 716 EQREVLTGLLLRGLQIIRSNGKRRLHAIHFEFNEESRIHSILKGHIHDKFHEWLGSHAD- 540
EQRE+L GLLL GLQI S+ +++ H + FEF E S+ H IL+ HIHD+F EWL ++
Sbjct: 630 EQREILVGLLLGGLQI-ESDKEKKSHMVKFEFRETSQAHLILRQHIHDQFREWLHPLSEF 688
Query: 539 ----IPSSFTTISHSYFTFYADQFWSNGRPRIPKLIHRWLSSLVVAYWYMYGGYRTSSGD 372
IP F +ISHS+F FYAD FW G+P IPKLIHRWLS +AYWYMYGG++TS GD
Sbjct: 689 EEDMIPFEFYSISHSFFGFYADNFWPKGQPEIPKLIHRWLSPHSLAYWYMYGGFKTSQGD 748
Query: 371 ILLRVKGSPECVVSIVKALKVKSLDCRVKKRGRVFWIGFLGDNATLFWKVVEPFILDDLN 192
I+LR+KGS E V +VKAL+ KS++CRVKK+G+VFWIG G N+ LFWK++EP++L+DL
Sbjct: 749 IILRLKGSLEGVEKVVKALRGKSMECRVKKKGKVFWIGLQGTNSALFWKLIEPYVLEDLK 808
Query: 191 DLLIAGGDSM 162
D L +SM
Sbjct: 809 DHLKPASESM 818
>ref|XP_003607061.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula] gi|355508116|gb|AES89258.1| Pentatricopeptide
repeat-containing protein, partial [Medicago truncatula]
Length = 767
Score = 228 bits (582), Expect = 1e-57
Identities = 110/192 (57%), Positives = 138/192 (71%), Gaps = 7/192 (3%)
Frame = -1
Query: 716 EQREVLTGLLLRGLQIIRSNGKRRLHAIHFEFNEESRIHSILKGHIHDKFHEWL------ 555
EQRE+L G+LL GLQI S+ K + H IHF F+ S H +LK HIH +F+EWL
Sbjct: 567 EQREILIGMLLGGLQI-DSDDKNKNHIIHFNFDGNSVSHYVLKSHIHRQFYEWLPPTSKP 625
Query: 554 -GSHADIPSSFTTISHSYFTFYADQFWSNGRPRIPKLIHRWLSSLVVAYWYMYGGYRTSS 378
G +IP F TI S+F FYADQFW NG+P IPKL+HRWLS V+AYWYMYGG+R SS
Sbjct: 626 SGDSENIPGKFCTIPSSHFGFYADQFWPNGQPTIPKLVHRWLSPCVLAYWYMYGGHRNSS 685
Query: 377 GDILLRVKGSPECVVSIVKALKVKSLDCRVKKRGRVFWIGFLGDNATLFWKVVEPFILDD 198
GD+LL++KGS E V +IVK K S+DC+VK +G+VFWIG LG N T FWK+VEP+IL+D
Sbjct: 686 GDVLLKIKGSREGVENIVKKFKAMSIDCKVKGKGKVFWIGILGSNTTWFWKLVEPYILED 745
Query: 197 LNDLLIAGGDSM 162
+ D AG ++M
Sbjct: 746 VKDFSKAGVNTM 757
>ref|XP_003588289.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|357469333|ref|XP_003604951.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
gi|357520985|ref|XP_003630781.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
gi|355477337|gb|AES58540.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
gi|355506006|gb|AES87148.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
gi|355524803|gb|AET05257.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 775
Score = 228 bits (582), Expect = 1e-57
Identities = 110/192 (57%), Positives = 138/192 (71%), Gaps = 7/192 (3%)
Frame = -1
Query: 716 EQREVLTGLLLRGLQIIRSNGKRRLHAIHFEFNEESRIHSILKGHIHDKFHEWL------ 555
EQRE+L G+LL GLQI S+ K + H IHF F+ S H +LK HIH +F+EWL
Sbjct: 567 EQREILIGMLLGGLQI-DSDDKNKNHIIHFNFDGNSVSHYVLKSHIHRQFYEWLPPTSKP 625
Query: 554 -GSHADIPSSFTTISHSYFTFYADQFWSNGRPRIPKLIHRWLSSLVVAYWYMYGGYRTSS 378
G +IP F TI S+F FYADQFW NG+P IPKL+HRWLS V+AYWYMYGG+R SS
Sbjct: 626 SGDSENIPGKFCTIPSSHFGFYADQFWPNGQPTIPKLVHRWLSPCVLAYWYMYGGHRNSS 685
Query: 377 GDILLRVKGSPECVVSIVKALKVKSLDCRVKKRGRVFWIGFLGDNATLFWKVVEPFILDD 198
GD+LL++KGS E V +IVK K S+DC+VK +G+VFWIG LG N T FWK+VEP+IL+D
Sbjct: 686 GDVLLKIKGSREGVENIVKKFKAMSIDCKVKGKGKVFWIGILGSNTTWFWKLVEPYILED 745
Query: 197 LNDLLIAGGDSM 162
+ D AG ++M
Sbjct: 746 VKDFSKAGVNTM 757
>ref|XP_002885984.1| hypothetical protein ARALYDRAFT_343169 [Arabidopsis lyrata subsp.
lyrata] gi|297331824|gb|EFH62243.1| hypothetical protein
ARALYDRAFT_343169 [Arabidopsis lyrata subsp. lyrata]
Length = 841
Score = 224 bits (572), Expect = 2e-56
Identities = 111/213 (52%), Positives = 147/213 (69%), Gaps = 5/213 (2%)
Frame = -1
Query: 716 EQREVLTGLLLRGLQIIRSNGKRRLHAIHFEFNEESRIHSILKGHIHDKFHEWLGSHAD- 540
EQREVL GLLL GLQI S+ +++ H I FEF E S+ H ILK HIHD+F EWL ++
Sbjct: 623 EQREVLVGLLLGGLQI-ESDKEKKSHMIRFEFRENSQAHLILKQHIHDQFREWLHPLSNF 681
Query: 539 ----IPSSFTTISHSYFTFYADQFWSNGRPRIPKLIHRWLSSLVVAYWYMYGGYRTSSGD 372
IP F ++ HSYF FYA+ FW G+P IP LIHRWLS +AYWYMY G++TSSGD
Sbjct: 682 QEDIIPFEFYSVPHSYFGFYAEHFWPKGQPEIPNLIHRWLSPHSLAYWYMYSGFKTSSGD 741
Query: 371 ILLRVKGSPECVVSIVKALKVKSLDCRVKKRGRVFWIGFLGDNATLFWKVVEPFILDDLN 192
I+LR+KGS E V +VKAL+ KS++CRVKK+G++FWIG G N+ LFW ++EP++L+DL
Sbjct: 742 IILRLKGSLEGVEKVVKALRAKSMECRVKKKGKIFWIGLQGTNSALFWNLIEPYVLEDLK 801
Query: 191 DLLIAGGDSMDP*KPNVSTLTAGRNQTRRIQVI 93
D L +S+ N ST + T+ ++ I
Sbjct: 802 DHLKPPSESIG----NASTQNQKLDSTKPVEEI 830
>ref|XP_006409500.1| hypothetical protein EUTSA_v10022548mg [Eutrema salsugineum]
gi|557110662|gb|ESQ50953.1| hypothetical protein
EUTSA_v10022548mg [Eutrema salsugineum]
Length = 848
Score = 224 bits (571), Expect = 2e-56
Identities = 107/190 (56%), Positives = 140/190 (73%), Gaps = 4/190 (2%)
Frame = -1
Query: 716 EQREVLTGLLLRGLQIIRSNGKRRLHAIHFEFNEESRIHSILKGHIHDKFHEWLGSHAD- 540
EQREVL GLLL GLQI S+ + + H I FEF + S+ H IL+ HIHD+F EWL +D
Sbjct: 624 EQREVLVGLLLGGLQI-ESDKEMKSHKIKFEFRDNSQAHVILRQHIHDQFREWLAPSSDL 682
Query: 539 ---IPSSFTTISHSYFTFYADQFWSNGRPRIPKLIHRWLSSLVVAYWYMYGGYRTSSGDI 369
IP +F+++SHSYF FYA+ FW GR IPKLIHRWLS +AYWYMY G++TSSGDI
Sbjct: 683 QEDIPFNFSSVSHSYFGFYAEHFWPKGRSEIPKLIHRWLSPHSLAYWYMYSGFKTSSGDI 742
Query: 368 LLRVKGSPECVVSIVKALKVKSLDCRVKKRGRVFWIGFLGDNATLFWKVVEPFILDDLND 189
+LR+KGS E V +VKAL+ KS++CRVKK+G+VFWIG G N+ FWK++EP +L+++ D
Sbjct: 743 ILRLKGSLEGVEKVVKALRGKSMECRVKKKGKVFWIGLQGTNSAWFWKLIEPHVLEEMKD 802
Query: 188 LLIAGGDSMD 159
L +SM+
Sbjct: 803 HLKPASESMN 812
>ref|XP_004152074.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15820-like
[Cucumis sativus]
Length = 797
Score = 224 bits (571), Expect = 2e-56
Identities = 107/183 (58%), Positives = 137/183 (74%), Gaps = 7/183 (3%)
Frame = -1
Query: 716 EQREVLTGLLLRGLQIIRSNGKRRLHAIHFEFNEESRIHSILKGHIHDKFHEWLGSHA-- 543
EQRE+L GLLL GL+I S+ +R+ H I FEF+ + HS+L+ HI++++H+WL S +
Sbjct: 583 EQREILVGLLLGGLEI-ESDDERKNHRIQFEFHRNCKTHSVLRRHIYEQYHKWLHSASKL 641
Query: 542 -----DIPSSFTTISHSYFTFYADQFWSNGRPRIPKLIHRWLSSLVVAYWYMYGGYRTSS 378
DIP F T+SHSYF FYADQFW GR IP LIHRWLS V+AYWYMYGG RTSS
Sbjct: 642 TDGDVDIPYKFCTVSHSYFGFYADQFWPRGRRAIPNLIHRWLSPRVLAYWYMYGGCRTSS 701
Query: 377 GDILLRVKGSPECVVSIVKALKVKSLDCRVKKRGRVFWIGFLGDNATLFWKVVEPFILDD 198
GDILL++KGS E V IVK+L+ KS+ C+VK++G ++WIG LG NAT FWK++EPFILD
Sbjct: 702 GDILLKLKGSHEGVEKIVKSLREKSIHCKVKRKGNMYWIGLLGSNATWFWKLIEPFILDY 761
Query: 197 LND 189
L +
Sbjct: 762 LKE 764
>ref|XP_004171087.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15820-like, partial [Cucumis sativus]
Length = 747
Score = 223 bits (569), Expect = 4e-56
Identities = 107/183 (58%), Positives = 137/183 (74%), Gaps = 7/183 (3%)
Frame = -1
Query: 716 EQREVLTGLLLRGLQIIRSNGKRRLHAIHFEFNEESRIHSILKGHIHDKFHEWLGSHA-- 543
EQRE+L GLLL GL+I S+ +R+ H I FEF+ + HS+L+ HI++++H+WL S +
Sbjct: 533 EQREILVGLLLGGLEI-ESDEERKNHRIQFEFHRNCKTHSVLRRHIYEQYHKWLHSASKL 591
Query: 542 -----DIPSSFTTISHSYFTFYADQFWSNGRPRIPKLIHRWLSSLVVAYWYMYGGYRTSS 378
DIP F T+SHSYF FYADQFW GR IP LIHRWLS V+AYWYMYGG RTSS
Sbjct: 592 TDGDVDIPYKFCTVSHSYFGFYADQFWPRGRRAIPNLIHRWLSPRVLAYWYMYGGCRTSS 651
Query: 377 GDILLRVKGSPECVVSIVKALKVKSLDCRVKKRGRVFWIGFLGDNATLFWKVVEPFILDD 198
GDILL++KGS E V IVK+L+ KS+ C+VK++G ++WIG LG NAT FWK++EPFILD
Sbjct: 652 GDILLKLKGSHEGVEKIVKSLREKSIHCKVKRKGNMYWIGLLGTNATWFWKLIEPFILDY 711
Query: 197 LND 189
L +
Sbjct: 712 LKE 714