BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00032404
         (1745 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006340751.1| PREDICTED: 26S proteasome non-ATPase regulat...    68   1e-08
ref|XP_006340749.1| PREDICTED: 26S proteasome non-ATPase regulat...    68   1e-08
ref|XP_004232501.1| PREDICTED: 26S proteasome non-ATPase regulat...    68   1e-08
gb|AFK33488.1| unknown [Lotus japonicus]                               60   2e-06

>ref|XP_006340751.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 4 homolog
            isoform X3 [Solanum tuberosum]
          Length = 403

 Score = 68.2 bits (165), Expect = 1e-08
 Identities = 38/96 (39%), Positives = 51/96 (53%), Gaps = 14/96 (14%)
 Frame = +3

Query: 1104 ATGMSSFEFGVDSNLAPELA--------------XXXXXXXXXXXXXXXNGEKHTTTEDA 1241
            A G+S ++FGVD NL PELA                              GE  +T++D 
Sbjct: 209  AGGVSGYDFGVDPNLDPELALALRVSMEEERARQEAAAKKAAEEAGNQEKGENQSTSQDV 268

Query: 1242 TMTKNVNSATSEPETKATDLIEDNNTLLQQAFTKAV 1349
             M +NVN+ TSEPE+KATDL++D N LLQQA   ++
Sbjct: 269  AMAENVNAGTSEPESKATDLMDDENALLQQALAMSM 304


>ref|XP_006340749.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 4 homolog
            isoform X1 [Solanum tuberosum]
            gi|565347473|ref|XP_006340750.1| PREDICTED: 26S
            proteasome non-ATPase regulatory subunit 4 homolog
            isoform X2 [Solanum tuberosum]
          Length = 404

 Score = 68.2 bits (165), Expect = 1e-08
 Identities = 38/96 (39%), Positives = 51/96 (53%), Gaps = 14/96 (14%)
 Frame = +3

Query: 1104 ATGMSSFEFGVDSNLAPELA--------------XXXXXXXXXXXXXXXNGEKHTTTEDA 1241
            A G+S ++FGVD NL PELA                              GE  +T++D 
Sbjct: 209  AGGVSGYDFGVDPNLDPELALALRVSMEEERARQEAAAKKAAEEAGNQEKGENQSTSQDV 268

Query: 1242 TMTKNVNSATSEPETKATDLIEDNNTLLQQAFTKAV 1349
             M +NVN+ TSEPE+KATDL++D N LLQQA   ++
Sbjct: 269  AMAENVNAGTSEPESKATDLMDDENALLQQALAMSM 304


>ref|XP_004232501.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 4-like
            [Solanum lycopersicum]
          Length = 402

 Score = 68.2 bits (165), Expect = 1e-08
 Identities = 38/96 (39%), Positives = 51/96 (53%), Gaps = 14/96 (14%)
 Frame = +3

Query: 1104 ATGMSSFEFGVDSNLAPELA--------------XXXXXXXXXXXXXXXNGEKHTTTEDA 1241
            A G+S ++FGVD NL PELA                              GE  +T++D 
Sbjct: 209  AGGVSGYDFGVDPNLDPELALALRVSMEEERARQEAAAKKAAEEAGNQEKGENQSTSQDV 268

Query: 1242 TMTKNVNSATSEPETKATDLIEDNNTLLQQAFTKAV 1349
             M +NVN+ TSEPE+KATDL++D N LLQQA   ++
Sbjct: 269  AMAENVNAGTSEPESKATDLMDDENALLQQALAMSM 304


>gb|AFK33488.1| unknown [Lotus japonicus]
          Length = 403

 Score = 60.5 bits (145), Expect = 2e-06
 Identities = 38/95 (40%), Positives = 50/95 (52%), Gaps = 13/95 (13%)
 Frame = +3

Query: 1104 ATGMSSFEFGVDSNLAPELAXXXXXXXXXXXXXXX-----------NGEK--HTTTEDAT 1244
            A G+S +EFGVD NL PELA                          N EK   T+++DAT
Sbjct: 209  AGGVSGYEFGVDPNLDPELALALRVSMEEERARQEAAAKKAAEEAANQEKGGETSSQDAT 268

Query: 1245 MTKNVNSATSEPETKATDLIEDNNTLLQQAFTKAV 1349
            MT+  ++ATSE E K  DL++D N LLQQA   ++
Sbjct: 269  MTERASAATSEAENKTIDLMDDENALLQQALAMSM 303