BLASTX nr result

ID: Atropa21_contig00032336 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00032336
         (574 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006351213.1| PREDICTED: probable ubiquitin-like-specific ...   172   7e-41
ref|XP_004250369.1| PREDICTED: probable ubiquitin-like-specific ...   171   1e-40

>ref|XP_006351213.1| PREDICTED: probable ubiquitin-like-specific protease 2B-like
           [Solanum tuberosum]
          Length = 888

 Score =  172 bits (435), Expect = 7e-41
 Identities = 87/108 (80%), Positives = 93/108 (86%), Gaps = 1/108 (0%)
 Frame = +3

Query: 252 MDVFDFKADEKPP-EIEANRFCSKYIVTQNGAPGTNINSKETSDEPSVDIEAADSDFNGN 428
           MDVF+FKA+E+ P EIEANRFC+ Y +T+NG   TNINSK T DEPS DIEAADSDFNGN
Sbjct: 1   MDVFEFKAEEEQPSEIEANRFCNNYTITENG---TNINSKGTGDEPSEDIEAADSDFNGN 57

Query: 429 RALSSLDAEGCSDERTLRLGSMPKITLTNKRRYPDREPNNHISGSFLE 572
            ALSSLDAEGCSDER LRLGSMP IT TNKRRYPDREPNNHI GSFLE
Sbjct: 58  CALSSLDAEGCSDERMLRLGSMPNITSTNKRRYPDREPNNHIGGSFLE 105


>ref|XP_004250369.1| PREDICTED: probable ubiquitin-like-specific protease 2B-like
           [Solanum lycopersicum]
          Length = 889

 Score =  171 bits (433), Expect = 1e-40
 Identities = 83/108 (76%), Positives = 91/108 (84%), Gaps = 1/108 (0%)
 Frame = +3

Query: 252 MDVFDFKA-DEKPPEIEANRFCSKYIVTQNGAPGTNINSKETSDEPSVDIEAADSDFNGN 428
           MDVF+FK  DE+P E EANRFC+ Y +T+NGA GTN+NSK T DEPS DIEAADSDFNGN
Sbjct: 1   MDVFEFKPEDEQPSENEANRFCNNYTITENGALGTNMNSKGTGDEPSEDIEAADSDFNGN 60

Query: 429 RALSSLDAEGCSDERTLRLGSMPKITLTNKRRYPDREPNNHISGSFLE 572
            ALSSLDAEGC DER LRLGS P IT TNKRR+PDREPNNH+ GSFLE
Sbjct: 61  HALSSLDAEGCGDERMLRLGSTPNITSTNKRRFPDREPNNHVGGSFLE 108


Top