BLASTX nr result

ID: Atropa21_contig00032330 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00032330
         (514 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006361364.1| PREDICTED: uncharacterized protein LOC102596...    71   1e-10
gb|AAT40504.2| Polyprotein, putative [Solanum demissum]                64   2e-08
gb|AAT38756.2| Putative methyltransferase family protein [Solanu...    61   1e-07
gb|AAT40500.1| Putative reverse transcriptase, identical [Solanu...    59   9e-07
gb|AAT40495.2| Polyprotein, putative [Solanum demissum]                55   1e-05

>ref|XP_006361364.1| PREDICTED: uncharacterized protein LOC102596609 [Solanum tuberosum]
          Length = 278

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 35/56 (62%), Positives = 38/56 (67%)
 Frame = +1

Query: 1   SVEDKMREARLRWFGHVKRRCEDAPVRRCERLXXXXXXXXXXXSKKN*GEVIRHDI 168
           SV DK+REARLRWFGHV+RRC DAPVRRCE L            KK  GEVIR D+
Sbjct: 199 SVVDKLREARLRWFGHVRRRCADAPVRRCEGLVVEGTRRGRGRPKKYWGEVIRQDL 254


>gb|AAT40504.2| Polyprotein, putative [Solanum demissum]
          Length = 868

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 33/56 (58%), Positives = 36/56 (64%)
 Frame = +1

Query: 1   SVEDKMREARLRWFGHVKRRCEDAPVRRCERLXXXXXXXXXXXSKKN*GEVIRHDI 168
           SV DK+REARLRWFGHVKRR  DAPVRRCE +            KK   EVIR D+
Sbjct: 612 SVVDKLREARLRWFGHVKRRSADAPVRRCEVMVVEGTRRGRGRPKKYWEEVIRQDL 667


>gb|AAT38756.2| Putative methyltransferase family protein [Solanum demissum]
          Length = 828

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 32/56 (57%), Positives = 35/56 (62%)
 Frame = +1

Query: 1   SVEDKMREARLRWFGHVKRRCEDAPVRRCERLXXXXXXXXXXXSKKN*GEVIRHDI 168
           SV DK+REARLRWFGHVKRR  DA VRRCE +            KK   EVIR D+
Sbjct: 29  SVVDKLREARLRWFGHVKRRSADAAVRRCEVMVVEGTRRGRGRPKKYWEEVIRQDL 84


>gb|AAT40500.1| Putative reverse transcriptase, identical [Solanum demissum]
          Length = 213

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 26/30 (86%), Positives = 27/30 (90%)
 Frame = +1

Query: 1   SVEDKMREARLRWFGHVKRRCEDAPVRRCE 90
           SV DK+REARLRWFGHVKRR  DAPVRRCE
Sbjct: 144 SVVDKLREARLRWFGHVKRRSADAPVRRCE 173


>gb|AAT40495.2| Polyprotein, putative [Solanum demissum]
          Length = 115

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 24/32 (75%), Positives = 27/32 (84%)
 Frame = +1

Query: 1   SVEDKMREARLRWFGHVKRRCEDAPVRRCERL 96
           S+ DK R+ARLRWFGHV RR  +APVRRCERL
Sbjct: 65  SIVDKTRKARLRWFGHVMRRSTEAPVRRCERL 96


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