BLASTX nr result
ID: Atropa21_contig00032274
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00032274
(795 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004250821.1| PREDICTED: uncharacterized protein LOC101264... 95 5e-31
gb|AAF79879.1|AC000348_32 T7N9.5 [Arabidopsis thaliana] 73 2e-27
ref|XP_004240277.1| PREDICTED: uncharacterized protein LOC101248... 100 9e-27
ref|XP_004252107.1| PREDICTED: uncharacterized protein LOC101259... 100 1e-26
ref|XP_004252168.1| PREDICTED: uncharacterized protein LOC101260... 98 2e-25
ref|XP_004252498.1| PREDICTED: uncharacterized protein LOC101255... 97 2e-25
ref|XP_004231415.1| PREDICTED: uncharacterized protein LOC101266... 96 6e-25
ref|XP_004235138.1| PREDICTED: uncharacterized protein LOC101243... 95 6e-25
ref|XP_004240202.1| PREDICTED: uncharacterized protein LOC101267... 96 6e-25
ref|XP_004250863.1| PREDICTED: uncharacterized protein LOC101267... 94 8e-25
ref|XP_004239452.1| PREDICTED: uncharacterized protein LOC101259... 90 1e-23
ref|XP_004246827.1| PREDICTED: uncharacterized protein LOC101260... 89 2e-23
ref|XP_004228785.1| PREDICTED: uncharacterized protein LOC101255... 94 2e-23
ref|XP_004240625.1| PREDICTED: uncharacterized protein LOC101261... 94 9e-23
ref|XP_004231364.1| PREDICTED: uncharacterized protein LOC101245... 91 2e-22
gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hop... 86 4e-22
gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi... 73 2e-20
gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsi... 77 4e-20
ref|XP_004233950.1| PREDICTED: uncharacterized protein LOC101265... 78 4e-20
ref|XP_004252487.1| PREDICTED: uncharacterized protein LOC101249... 86 4e-20
>ref|XP_004250821.1| PREDICTED: uncharacterized protein LOC101264996 [Solanum
lycopersicum]
Length = 736
Score = 94.7 bits (234), Expect(3) = 5e-31
Identities = 49/118 (41%), Positives = 68/118 (57%)
Frame = +2
Query: 317 SVFSNFIPSSVLASTTTLNVSL*HQSLGHLPIFNMKNSSIFSLYFSLNDFSCDVCAKARQ 496
+V SN I S L + N L H+ +GH+P+ +K S S CD+C ARQ
Sbjct: 497 NVNSNSITSHSLVAQKLPNSDLWHRRMGHVPLPVLKKLPSISNSCSSALGQCDICPMARQ 556
Query: 497 SKLPF*SSTICTKAVFELIHVDTWGPYKVTTHDGFRYFSIIVDDYSRGNGFIYLKSKA 670
+++PF S + FELIH+D WGPYK+TT++G YF +VDDYSR F L+ K+
Sbjct: 557 TRIPFKHSLTTSATCFELIHMDVWGPYKITTYNGMNYFLTLVDDYSRWTCFFLLRVKS 614
Score = 46.2 bits (108), Expect(3) = 5e-31
Identities = 23/60 (38%), Positives = 32/60 (53%)
Frame = +1
Query: 16 LSNSHKLKVTHKGSITILPNFTLHNVLFVPDFKFNLLSIHKFTIQFQCMLIFFSFGAIFQ 195
L N ++H G+ + L +VL+VP FKFNLLS+ K T Q C + F+ FQ
Sbjct: 414 LPNGESTDISHVGNSHLAGGDVLKDVLYVPTFKFNLLSVSKATKQLNCCISFYPDFCAFQ 473
Score = 41.2 bits (95), Expect(3) = 5e-31
Identities = 16/39 (41%), Positives = 28/39 (71%)
Frame = +1
Query: 649 YLLKIKSNIFHVLKQFLCMVERQFQIKVKIIRSDKAKEL 765
+LL++KS+++ ++K FL M+ QF+ VKI R+D E+
Sbjct: 608 FLLRVKSDVYSIIKTFLAMILNQFKKHVKIFRTDNGSEI 646
>gb|AAF79879.1|AC000348_32 T7N9.5 [Arabidopsis thaliana]
Length = 1436
Score = 73.2 bits (178), Expect(3) = 2e-27
Identities = 43/124 (34%), Positives = 60/124 (48%), Gaps = 4/124 (3%)
Frame = +2
Query: 311 DVSVFSNFIPSSVLASTTTLNVSL*HQSLGHLPIFNMKNSSIFSLY----FSLNDFSCDV 478
DVS F P + S+ + H+ LGH + S + + + C V
Sbjct: 538 DVSSF----PGKSVCSSVKNESEMWHKRLGHPSFAKIDTLSDVLMLPKQKINKDSSHCHV 593
Query: 479 CAKARQSKLPF*SSTICTKAVFELIHVDTWGPYKVTTHDGFRYFSIIVDDYSRGNGFIYL 658
C ++Q LPF S + FEL+H+DTWGP+ V T D +RYF IVDD+SR L
Sbjct: 594 CHLSKQKHLPFKSVNHIREKAFELVHIDTWGPFSVPTVDSYRYFLTIVDDFSRATWIYLL 653
Query: 659 KSKA 670
K K+
Sbjct: 654 KQKS 657
Score = 50.8 bits (120), Expect(3) = 2e-27
Identities = 25/63 (39%), Positives = 35/63 (55%)
Frame = +1
Query: 7 YASLSNSHKLKVTHKGSITILPNFTLHNVLFVPDFKFNLLSIHKFTIQFQCMLIFFSFGA 186
+ L N H +K+ G I + +LHNVLF+P+FKFNLLS+ T Q + F S
Sbjct: 448 FVRLPNGHTVKIEGTGFIQLTDALSLHNVLFIPEFKFNLLSVSVLTKTLQSKVSFTSDEC 507
Query: 187 IFQ 195
+ Q
Sbjct: 508 MIQ 510
Score = 45.8 bits (107), Expect(3) = 2e-27
Identities = 23/41 (56%), Positives = 27/41 (65%)
Frame = +1
Query: 643 WIYLLKIKSNIFHVLKQFLCMVERQFQIKVKIIRSDKAKEL 765
WIYLLK KS++ V FL MVE Q+ KV +RSD A EL
Sbjct: 649 WIYLLKQKSDVLTVFPSFLKMVETQYHTKVCSVRSDNAHEL 689
>ref|XP_004240277.1| PREDICTED: uncharacterized protein LOC101248781 [Solanum
lycopersicum]
Length = 729
Score = 100 bits (248), Expect(2) = 9e-27
Identities = 48/101 (47%), Positives = 62/101 (61%), Gaps = 1/101 (0%)
Frame = +2
Query: 371 NVSL*HQSLGHLPIFNMKNSSIFSLYFSLND-FSCDVCAKARQSKLPF*SSTICTKAVFE 547
N L H LGH+P MKN S L FS F+C +C ARQ+++PF S T ++FE
Sbjct: 255 NEFLWHARLGHVPFVKMKNISTIPLKFSNKQPFTCTICPMARQTRMPFPESVTRTSSIFE 314
Query: 548 LIHVDTWGPYKVTTHDGFRYFSIIVDDYSRGNGFIYLKSKA 670
L+HVD WGPY V THDG+ YF +VDDYSR ++ K+
Sbjct: 315 LLHVDLWGPYNVPTHDGYHYFLTMVDDYSRATWTQLIRCKS 355
Score = 47.4 bits (111), Expect(2) = 9e-27
Identities = 21/50 (42%), Positives = 30/50 (60%)
Frame = +1
Query: 643 WIYLLKIKSNIFHVLKQFLCMVERQFQIKVKIIRSDKAKELGSSLANSDF 792
W L++ KSN H +K F+ ++E QFQ ++K IRSD E S+ A F
Sbjct: 347 WTQLIRCKSNALHTIKAFISLIENQFQTRLKTIRSDNGLEFTSTEATCFF 396
>ref|XP_004252107.1| PREDICTED: uncharacterized protein LOC101259219 [Solanum
lycopersicum]
Length = 986
Score = 100 bits (248), Expect(2) = 1e-26
Identities = 48/101 (47%), Positives = 63/101 (62%), Gaps = 1/101 (0%)
Frame = +2
Query: 371 NVSL*HQSLGHLPIFNMKNSSIFSLYFSLND-FSCDVCAKARQSKLPF*SSTICTKAVFE 547
N L H LGH+P MK+ S L FS F+C +C ARQ+++PF ST T ++FE
Sbjct: 598 NEFLWHARLGHVPFVKMKSISTIPLKFSNKQPFTCTICPMARQTRMPFPESTTRTSSIFE 657
Query: 548 LIHVDTWGPYKVTTHDGFRYFSIIVDDYSRGNGFIYLKSKA 670
L+HVD WGPY V THDG+ YF +VDDYSR ++ K+
Sbjct: 658 LLHVDLWGPYNVPTHDGYHYFLTMVDDYSRATWTQLIRCKS 698
Score = 46.6 bits (109), Expect(2) = 1e-26
Identities = 20/50 (40%), Positives = 30/50 (60%)
Frame = +1
Query: 643 WIYLLKIKSNIFHVLKQFLCMVERQFQIKVKIIRSDKAKELGSSLANSDF 792
W L++ KSN H +K F+ ++E QF ++K IRSD E ++ A S F
Sbjct: 690 WTQLIRCKSNALHTIKAFVSLIENQFHTRLKTIRSDNGLEFSNNEATSFF 739
Score = 60.8 bits (146), Expect = 5e-07
Identities = 31/75 (41%), Positives = 45/75 (60%)
Frame = +1
Query: 13 SLSNSHKLKVTHKGSITILPNFTLHNVLFVPDFKFNLLSIHKFTIQFQCMLIFFSFGAIF 192
+L N +K+KVT G + + P L+ VL++P FKFNL+S+ Q + M+ F S +
Sbjct: 453 TLPNGYKVKVTEFGDVCLNPTLILYKVLYIPSFKFNLISVCCLANQLRGMVSFNSDSCLL 512
Query: 193 QGPSMKSQWFLVKFR 237
QGPS+KS L K R
Sbjct: 513 QGPSLKSPLALGKAR 527
>ref|XP_004252168.1| PREDICTED: uncharacterized protein LOC101260907 [Solanum
lycopersicum]
Length = 924
Score = 97.8 bits (242), Expect(2) = 2e-25
Identities = 47/101 (46%), Positives = 62/101 (61%), Gaps = 1/101 (0%)
Frame = +2
Query: 371 NVSL*HQSLGHLPIFNMKNSSIFSLYFSLND-FSCDVCAKARQSKLPF*SSTICTKAVFE 547
N L + LGH+P MKN S L FS F+C +C ARQ+++PF S T ++FE
Sbjct: 433 NELLWNARLGHIPFVKMKNISSIPLKFSNKQPFTCTICPMARQTRMPFPESVTATSSIFE 492
Query: 548 LIHVDTWGPYKVTTHDGFRYFSIIVDDYSRGNGFIYLKSKA 670
L+ VD WGPY V THDG+ YF +VDDYSR +L+ K+
Sbjct: 493 LLRVDLWGPYNVPTHDGYHYFLTMVDDYSRATWTQFLRCKS 533
Score = 45.4 bits (106), Expect(2) = 2e-25
Identities = 20/50 (40%), Positives = 28/50 (56%)
Frame = +1
Query: 643 WIYLLKIKSNIFHVLKQFLCMVERQFQIKVKIIRSDKAKELGSSLANSDF 792
W L+ KSN H +K F+ ++E QF ++K IRSD E S+ A F
Sbjct: 525 WTQFLRCKSNALHTIKAFISLIENQFHTRLKTIRSDNGLEFSSTEATCFF 574
>ref|XP_004252498.1| PREDICTED: uncharacterized protein LOC101255375 [Solanum
lycopersicum]
Length = 402
Score = 97.4 bits (241), Expect(2) = 2e-25
Identities = 44/96 (45%), Positives = 61/96 (63%), Gaps = 1/96 (1%)
Frame = +2
Query: 386 HQSLGHLPIFNMKNSSIFSLYFSLND-FSCDVCAKARQSKLPF*SSTICTKAVFELIHVD 562
H LGH+P M+N + + FS F+C++C ARQ+++PF ST T +FEL+HVD
Sbjct: 221 HARLGHVPFVKMRNITSIPVNFSPKQPFTCNICPMARQTRMPFPESTSITTKIFELLHVD 280
Query: 563 TWGPYKVTTHDGFRYFSIIVDDYSRGNGFIYLKSKA 670
WGPY + THDG+ YF +VDDYSR L+ K+
Sbjct: 281 LWGPYHIPTHDGYHYFLTMVDDYSRSTWTQLLRCKS 316
Score = 45.8 bits (107), Expect(2) = 2e-25
Identities = 21/44 (47%), Positives = 27/44 (61%)
Frame = +1
Query: 643 WIYLLKIKSNIFHVLKQFLCMVERQFQIKVKIIRSDKAKELGSS 774
W LL+ KSN +K F+ ++E QFQ K+K IRSD E SS
Sbjct: 308 WTQLLRCKSNALQTIKAFVSLIENQFQTKLKAIRSDNGLEFTSS 351
Score = 61.2 bits (147), Expect = 4e-07
Identities = 30/66 (45%), Positives = 39/66 (59%)
Frame = +1
Query: 13 SLSNSHKLKVTHKGSITILPNFTLHNVLFVPDFKFNLLSIHKFTIQFQCMLIFFSFGAIF 192
SL N +K+KVT G + P TL VLFVP FKFNL+S+H Q ++ F +
Sbjct: 65 SLPNGYKVKVTQVGDACLNPVLTLSKVLFVPSFKFNLISVHCLASQLNGVISFDKSSCLL 124
Query: 193 QGPSMK 210
QGPS+K
Sbjct: 125 QGPSLK 130
>ref|XP_004231415.1| PREDICTED: uncharacterized protein LOC101266877 [Solanum
lycopersicum]
Length = 1537
Score = 95.9 bits (237), Expect(2) = 6e-25
Identities = 49/131 (37%), Positives = 71/131 (54%), Gaps = 16/131 (12%)
Frame = +2
Query: 326 SNFIPSSVLASTTTLNVS---------------L*HQSLGHLPIFNMKN-SSIFSLYFSL 457
SNF+P S +NV L H LGH+P MK+ + + +++
Sbjct: 652 SNFVPLKCKLSPNNMNVLDDHNSCSIAGDNVDLLWHNRLGHVPFAKMKSITDLLAVFSPK 711
Query: 458 NDFSCDVCAKARQSKLPF*SSTICTKAVFELIHVDTWGPYKVTTHDGFRYFSIIVDDYSR 637
FSC++C +RQ +LPF S TK++FEL+H+D WGPY T+D +RYF +VDDYSR
Sbjct: 712 QPFSCNICPMSRQQRLPFNHSNSQTKSIFELLHIDLWGPYHAPTYDNYRYFITLVDDYSR 771
Query: 638 GNGFIYLKSKA 670
L +K+
Sbjct: 772 STWTQLLSTKS 782
Score = 45.4 bits (106), Expect(2) = 6e-25
Identities = 24/44 (54%), Positives = 25/44 (56%)
Frame = +1
Query: 643 WIYLLKIKSNIFHVLKQFLCMVERQFQIKVKIIRSDKAKELGSS 774
W LL KSN VLK F MVE QF VK IR+D EL SS
Sbjct: 774 WTQLLSTKSNALQVLKNFTVMVENQFNTTVKSIRTDNGLELPSS 817
Score = 58.5 bits (140), Expect = 3e-06
Identities = 25/69 (36%), Positives = 42/69 (60%)
Frame = +1
Query: 4 LYASLSNSHKLKVTHKGSITILPNFTLHNVLFVPDFKFNLLSIHKFTIQFQCMLIFFSFG 183
+ SL N +K+KVT G + + P+ LH VL+VP FK+NL+S+ T +C+++F +
Sbjct: 516 ILVSLPNGYKVKVTEFGEVPVTPSIILHQVLYVPSFKYNLVSVQSLTATMKCIVLFTNAL 575
Query: 184 AIFQGPSMK 210
+ Q +K
Sbjct: 576 CLLQALLVK 584
>ref|XP_004235138.1| PREDICTED: uncharacterized protein LOC101243773 [Solanum
lycopersicum]
Length = 957
Score = 95.1 bits (235), Expect(2) = 6e-25
Identities = 43/96 (44%), Positives = 60/96 (62%), Gaps = 1/96 (1%)
Frame = +2
Query: 386 HQSLGHLPIFNMKNSSIFSLYFSLND-FSCDVCAKARQSKLPF*SSTICTKAVFELIHVD 562
H LGH+P M+N + + FS F+C++C ARQ+++PF ST T FEL+HVD
Sbjct: 602 HARLGHVPFVKMRNITSIPVNFSPKQPFTCNICPMARQTRMPFPESTSITTKTFELLHVD 661
Query: 563 TWGPYKVTTHDGFRYFSIIVDDYSRGNGFIYLKSKA 670
WGPY + THDG+ YF +VDDY+R L+ K+
Sbjct: 662 LWGPYHIPTHDGYHYFLTMVDDYNRSTWTQLLRCKS 697
Score = 46.2 bits (108), Expect(2) = 6e-25
Identities = 22/46 (47%), Positives = 28/46 (60%)
Frame = +1
Query: 643 WIYLLKIKSNIFHVLKQFLCMVERQFQIKVKIIRSDKAKELGSSLA 780
W LL+ KSN +K F+ ++E QFQ K+K IRSD E SS A
Sbjct: 689 WTQLLRCKSNALQTIKAFVSLIENQFQTKLKAIRSDNGLEFTSSEA 734
Score = 68.2 bits (165), Expect = 3e-09
Identities = 32/67 (47%), Positives = 42/67 (62%)
Frame = +1
Query: 13 SLSNSHKLKVTHKGSITILPNFTLHNVLFVPDFKFNLLSIHKFTIQFQCMLIFFSFGAIF 192
SL N +K+KVT G + P TL VLFVP FKFNL+S+H +Q ++ F F +
Sbjct: 446 SLPNGYKVKVTQVGDACLNPVLTLSKVLFVPSFKFNLISVHCLALQLNVVISFDKFSCLL 505
Query: 193 QGPSMKS 213
QGPS+KS
Sbjct: 506 QGPSLKS 512
>ref|XP_004240202.1| PREDICTED: uncharacterized protein LOC101267997 [Solanum
lycopersicum]
Length = 811
Score = 96.3 bits (238), Expect(2) = 6e-25
Identities = 52/125 (41%), Positives = 74/125 (59%), Gaps = 7/125 (5%)
Frame = +2
Query: 317 SVFSNFIPSSVLASTTTLNVS------L*HQSLGHLPIFNMKNSSIFSLYFSLND-FSCD 475
+V S+ ++VL++ T+L L H LGH+P MK + FS F+C
Sbjct: 563 TVCSSTENTNVLSNCTSLGSLKDDVDLLWHNRLGHVPFVKMKTIPTIPVKFSARQPFTCT 622
Query: 476 VCAKARQSKLPF*SSTICTKAVFELIHVDTWGPYKVTTHDGFRYFSIIVDDYSRGNGFIY 655
+C ARQ++LPF ST +K++F+L+HVD WGPY VTT+D RYF +VDDYSR
Sbjct: 623 ICPMARQTRLPFTHSTTHSKSIFDLLHVDLWGPYHVTTYDNCRYFITLVDDYSRATWTYL 682
Query: 656 LKSKA 670
L +K+
Sbjct: 683 LSTKS 687
Score = 45.1 bits (105), Expect(2) = 6e-25
Identities = 20/44 (45%), Positives = 27/44 (61%)
Frame = +1
Query: 643 WIYLLKIKSNIFHVLKQFLCMVERQFQIKVKIIRSDKAKELGSS 774
W YLL KSN VL+ F+ M+E QFQ +K IR+D E ++
Sbjct: 679 WTYLLSTKSNAIQVLQTFVNMIENQFQTTIKCIRTDNGLEFNNN 722
>ref|XP_004250863.1| PREDICTED: uncharacterized protein LOC101267084 [Solanum
lycopersicum]
Length = 747
Score = 94.0 bits (232), Expect(2) = 8e-25
Identities = 46/101 (45%), Positives = 60/101 (59%), Gaps = 1/101 (0%)
Frame = +2
Query: 371 NVSL*HQSLGHLPIFNMKNSSIFSLYFSLND-FSCDVCAKARQSKLPF*SSTICTKAVFE 547
N L H LGH+P MKN S L FS F+C +C ARQ+++PF S T ++FE
Sbjct: 606 NEFLWHARLGHVPFVKMKNISTIPLKFSNKQPFTCTICPMARQTRMPFPESVTTTSSIFE 665
Query: 548 LIHVDTWGPYKVTTHDGFRYFSIIVDDYSRGNGFIYLKSKA 670
L+HVD WG Y V THDG+ YF +VDD SR ++ K+
Sbjct: 666 LLHVDLWGHYNVPTHDGYHYFLTMVDDNSRATWTQLIRCKS 706
Score = 47.0 bits (110), Expect(2) = 8e-25
Identities = 21/50 (42%), Positives = 30/50 (60%)
Frame = +1
Query: 643 WIYLLKIKSNIFHVLKQFLCMVERQFQIKVKIIRSDKAKELGSSLANSDF 792
W L++ KSN H +K F+ ++E QF ++K IRSD E S+ A S F
Sbjct: 698 WTQLIRCKSNALHTIKAFISLIENQFHTRLKTIRSDNGLEFSSTEAISFF 747
>ref|XP_004239452.1| PREDICTED: uncharacterized protein LOC101259633 [Solanum
lycopersicum]
Length = 1105
Score = 89.7 bits (221), Expect(2) = 1e-23
Identities = 42/96 (43%), Positives = 59/96 (61%), Gaps = 1/96 (1%)
Frame = +2
Query: 386 HQSLGHLPIFNMKNSSIFSLYFSLND-FSCDVCAKARQSKLPF*SSTICTKAVFELIHVD 562
H LGH+P MK + FS F+C +C ARQ++LPF ST +K++F+L+HV+
Sbjct: 598 HNRLGHVPFVKMKTIPTIPVKFSARQPFTCTICPMARQTRLPFTHSTTHSKSIFDLLHVN 657
Query: 563 TWGPYKVTTHDGFRYFSIIVDDYSRGNGFIYLKSKA 670
WGPY V T++ RYF +VDDYSR L +K+
Sbjct: 658 LWGPYHVPTYNNCRYFITLVDDYSRATWTYLLSTKS 693
Score = 47.4 bits (111), Expect(2) = 1e-23
Identities = 22/44 (50%), Positives = 27/44 (61%)
Frame = +1
Query: 643 WIYLLKIKSNIFHVLKQFLCMVERQFQIKVKIIRSDKAKELGSS 774
W YLL KSN VL+ F+ M+E QFQ VK IRSD E ++
Sbjct: 685 WTYLLSTKSNAIQVLQTFINMIENQFQTNVKCIRSDNGLEFNNN 728
>ref|XP_004246827.1| PREDICTED: uncharacterized protein LOC101260567 [Solanum
lycopersicum]
Length = 923
Score = 89.4 bits (220), Expect(2) = 2e-23
Identities = 42/96 (43%), Positives = 58/96 (60%), Gaps = 1/96 (1%)
Frame = +2
Query: 386 HQSLGHLPIFNMKNSSIFSLYFSLND-FSCDVCAKARQSKLPF*SSTICTKAVFELIHVD 562
H LGH+P MK + FS F+C +C ARQ++LPF ST +K++F+L+H+D
Sbjct: 599 HNRLGHVPFVKMKTIPTIPVKFSNRQPFTCTICPMARQTRLPFTHSTTHSKSIFDLLHID 658
Query: 563 TWGPYKVTTHDGFRYFSIIVDDYSRGNGFIYLKSKA 670
WGPY V T+D RY +VDDYSR L +K+
Sbjct: 659 LWGPYHVPTYDNCRYCITLVDDYSRATWTYLLSTKS 694
Score = 47.0 bits (110), Expect(2) = 2e-23
Identities = 22/46 (47%), Positives = 28/46 (60%)
Frame = +1
Query: 643 WIYLLKIKSNIFHVLKQFLCMVERQFQIKVKIIRSDKAKELGSSLA 780
W YLL KSN +L+ F+ M+E QFQ VK IRSD E ++ A
Sbjct: 686 WTYLLSTKSNAIQILQTFINMIENQFQTTVKCIRSDNGLEFNNNEA 731
>ref|XP_004228785.1| PREDICTED: uncharacterized protein LOC101255821 [Solanum
lycopersicum]
Length = 1125
Score = 94.4 bits (233), Expect(2) = 2e-23
Identities = 43/96 (44%), Positives = 60/96 (62%), Gaps = 1/96 (1%)
Frame = +2
Query: 386 HQSLGHLPIFNMKNSSIFSLYFSLND-FSCDVCAKARQSKLPF*SSTICTKAVFELIHVD 562
H LGH+P M+N + + S F+C++C ARQ+++PF ST T +FEL+HVD
Sbjct: 609 HTRLGHVPFVKMRNITSIPVNVSPKQPFTCNICPMARQTRMPFQESTSITTKIFELLHVD 668
Query: 563 TWGPYKVTTHDGFRYFSIIVDDYSRGNGFIYLKSKA 670
WGPY + THDG+ YF +VDDYSR L+ K+
Sbjct: 669 LWGPYHIPTHDGYHYFLTMVDDYSRSTCTQLLRCKS 704
Score = 41.6 bits (96), Expect(2) = 2e-23
Identities = 20/43 (46%), Positives = 27/43 (62%)
Frame = +1
Query: 652 LLKIKSNIFHVLKQFLCMVERQFQIKVKIIRSDKAKELGSSLA 780
LL+ KSN +K F+ ++E +FQ K+K IRSD E SS A
Sbjct: 699 LLRCKSNALQTIKAFVSLIENEFQTKLKAIRSDNGLEFTSSEA 741
Score = 63.5 bits (153), Expect = 8e-08
Identities = 31/67 (46%), Positives = 41/67 (61%)
Frame = +1
Query: 13 SLSNSHKLKVTHKGSITILPNFTLHNVLFVPDFKFNLLSIHKFTIQFQCMLIFFSFGAIF 192
SL N +K+KVT G + TL VLFVP FKFNL+S+H +Q ++ F F +
Sbjct: 453 SLPNGYKVKVTQVGGACLNLVLTLSKVLFVPSFKFNLISVHCLALQLNGVISFDKFSCLL 512
Query: 193 QGPSMKS 213
QGPS+KS
Sbjct: 513 QGPSLKS 519
>ref|XP_004240625.1| PREDICTED: uncharacterized protein LOC101261123 [Solanum
lycopersicum]
Length = 943
Score = 93.6 bits (231), Expect(2) = 9e-23
Identities = 46/103 (44%), Positives = 67/103 (65%), Gaps = 3/103 (2%)
Frame = +2
Query: 371 NVSL*HQSLGHLPIFNMKNSSIFSLY---FSLNDFSCDVCAKARQSKLPF*SSTICTKAV 541
N ++ HQ LGH+P+ ++ S F + F+L+ CD+C ARQ++LPF ST + V
Sbjct: 529 NANIWHQRLGHVPMGVIRKISSFHKFGNKFALH--KCDICPLARQTRLPFPHSTSSSTCV 586
Query: 542 FELIHVDTWGPYKVTTHDGFRYFSIIVDDYSRGNGFIYLKSKA 670
F+L+H+D WGPY+V T+DG RYF IVDDYSR ++ K+
Sbjct: 587 FQLLHMDVWGPYRVETYDGMRYFFTIVDDYSRWTWTFLMRLKS 629
Score = 40.4 bits (93), Expect(2) = 9e-23
Identities = 16/40 (40%), Positives = 27/40 (67%)
Frame = +1
Query: 643 WIYLLKIKSNIFHVLKQFLCMVERQFQIKVKIIRSDKAKE 762
W +L+++KS++ +LKQF+ +E QF ++K IR D E
Sbjct: 621 WTFLMRLKSDVVSLLKQFVAEIETQFDKRIKRIRYDNGTE 660
>ref|XP_004231364.1| PREDICTED: uncharacterized protein LOC101245809 [Solanum
lycopersicum]
Length = 1094
Score = 90.9 bits (224), Expect(2) = 2e-22
Identities = 43/96 (44%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
Frame = +2
Query: 386 HQSLGHLPIFNMKNSSIFSLYFSLND-FSCDVCAKARQSKLPF*SSTICTKAVFELIHVD 562
H LGH+P M+N S + FS F C +C ARQ +LPF T T +FEL+HVD
Sbjct: 533 HNRLGHVPFVKMRNISSIPVKFSAKQPFMCSICPMARQERLPFKPRTTLTSHIFELLHVD 592
Query: 563 TWGPYKVTTHDGFRYFSIIVDDYSRGNGFIYLKSKA 670
WGPY T++ F+YF IVDD+SR L +K+
Sbjct: 593 LWGPYSTPTYNHFKYFMTIVDDFSRATWTQLLSTKS 628
Score = 42.0 bits (97), Expect(2) = 2e-22
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = +1
Query: 643 WIYLLKIKSNIFHVLKQFLCMVERQFQIKVKIIRSDKAKELGSSLANSDF 792
W LL KSN LK F+ M+E QF++ VK IR+D E ++ + + F
Sbjct: 620 WTQLLSTKSNALQNLKSFITMIENQFEVTVKKIRTDNGLEFVNTESTNFF 669
>gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hopscotch polyprotein
(gb|U12626) [Arabidopsis thaliana]
Length = 1315
Score = 85.5 bits (210), Expect(2) = 4e-22
Identities = 48/113 (42%), Positives = 67/113 (59%), Gaps = 3/113 (2%)
Frame = +2
Query: 341 SSVLASTTTLNVSL*HQSLGHLPIFNMKN-SSIFSLYFSLN--DFSCDVCAKARQSKLPF 511
SS+ ++ T + L H+ LGH + ++ SS+ S N DF C VC ++Q LPF
Sbjct: 394 SSITVASVTSH-DLWHKRLGHPSVQKLQPMSSLLSFPKQKNNTDFHCRVCHISKQKHLPF 452
Query: 512 *SSTICTKAVFELIHVDTWGPYKVTTHDGFRYFSIIVDDYSRGNGFIYLKSKA 670
S + F+LIH+DTWGP+ V THDG+RYF IVDDYSR L++K+
Sbjct: 453 VSHNNKSSRPFDLIHIDTWGPFSVQTHDGYRYFLTIVDDYSRATWVYLLRNKS 505
Score = 46.2 bits (108), Expect(2) = 4e-22
Identities = 20/41 (48%), Positives = 29/41 (70%)
Frame = +1
Query: 643 WIYLLKIKSNIFHVLKQFLCMVERQFQIKVKIIRSDKAKEL 765
W+YLL+ KS++ V+ F+ MVE QF+ +K +RSD A EL
Sbjct: 497 WVYLLRNKSDVLTVIPTFVTMVENQFETTIKGVRSDNAPEL 537
>gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1501
Score = 73.2 bits (178), Expect(3) = 2e-20
Identities = 43/116 (37%), Positives = 61/116 (52%), Gaps = 8/116 (6%)
Frame = +2
Query: 314 VSVFSNFIPSSVLASTTTLNVSL*HQSLGH--------LPIFNMKNSSIFSLYFSLNDFS 469
V ++ P+ + + + +L HQ LGH LP+F+ +S++ S S
Sbjct: 507 VYYLTDVTPAKIHTANVDSDQALWHQRLGHPSFSVLSSLPLFSKTSSTVTS-------HS 559
Query: 470 CDVCAKARQSKLPF*SSTICTKAVFELIHVDTWGPYKVTTHDGFRYFSIIVDDYSR 637
CDVC +A+Q++ F S T+ F LIH D WGPY+V G YF IVDDYSR
Sbjct: 560 CDVCFRAKQTREVFPESINKTEECFSLIHCDVWGPYRVPASCGAVYFLTIVDDYSR 615
Score = 37.7 bits (86), Expect(3) = 2e-20
Identities = 19/40 (47%), Positives = 23/40 (57%)
Frame = +1
Query: 643 WIYLLKIKSNIFHVLKQFLCMVERQFQIKVKIIRSDKAKE 762
W YLL KS + VL FL E+QF VK++RSD E
Sbjct: 618 WTYLLLEKSEVRQVLTNFLKYAEKQFGKTVKMVRSDNGTE 657
Score = 35.0 bits (79), Expect(3) = 2e-20
Identities = 19/54 (35%), Positives = 26/54 (48%)
Frame = +1
Query: 52 GSITILPNFTLHNVLFVPDFKFNLLSIHKFTIQFQCMLIFFSFGAIFQGPSMKS 213
G +T+ +L NVLFVP L+S+ K Q QC+ F Q S K+
Sbjct: 443 GVLTLSNTVSLTNVLFVPSLNCTLISVSKLLKQTQCLATFTDTLCFLQDRSSKT 496
>gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1461
Score = 76.6 bits (187), Expect(2) = 4e-20
Identities = 43/114 (37%), Positives = 64/114 (56%), Gaps = 4/114 (3%)
Frame = +2
Query: 341 SSVLASTTTLNVSL*HQSLGHLPIFNMKNSSIFSL----YFSLNDFSCDVCAKARQSKLP 508
S ++ ++VS+ H+ LGH P F+ +S L + + C VC A+Q KL
Sbjct: 555 SPAISVNAVVDVSVWHKRLGH-PSFSRLDSLSEVLGTTRHKNKKSAYCHVCHLAKQKKLS 613
Query: 509 F*SSTICTKAVFELIHVDTWGPYKVTTHDGFRYFSIIVDDYSRGNGFIYLKSKA 670
F S+ + FEL+H+D WGP+ V T +G++YF IVDD+SR LKSK+
Sbjct: 614 FPSANNICNSTFELLHIDVWGPFSVETVEGYKYFLTIVDDHSRATWIYLLKSKS 667
Score = 48.5 bits (114), Expect(2) = 4e-20
Identities = 22/41 (53%), Positives = 29/41 (70%)
Frame = +1
Query: 643 WIYLLKIKSNIFHVLKQFLCMVERQFQIKVKIIRSDKAKEL 765
WIYLLK KS++ V F+ +VE Q+ +VK +RSD AKEL
Sbjct: 659 WIYLLKSKSDVLTVFPAFIDLVENQYDTRVKSVRSDNAKEL 699
>ref|XP_004233950.1| PREDICTED: uncharacterized protein LOC101265997 [Solanum
lycopersicum]
Length = 953
Score = 77.8 bits (190), Expect(2) = 4e-20
Identities = 44/116 (37%), Positives = 61/116 (52%), Gaps = 7/116 (6%)
Frame = +2
Query: 344 SVLASTTTLNVSL*HQSLGHLPIFNMKNSSIFSLYF-------SLNDFSCDVCAKARQSK 502
S+ S V L HQ LGH +SS+ + F S +C +C A+Q +
Sbjct: 503 SIPPSIADSRVLLWHQRLGHT------SSSVLTQVFHFPVTQCSKEVHTCTICPLAKQHR 556
Query: 503 LPF*SSTICTKAVFELIHVDTWGPYKVTTHDGFRYFSIIVDDYSRGNGFIYLKSKA 670
LPF ST + F+L+H+D WGP+ TTHDG R+F IVDDY+R +K K+
Sbjct: 557 LPFFHSTSMSTKAFQLLHIDVWGPFNTTTHDGNRFFVTIVDDYTRMLWLFLVKLKS 612
Score = 47.4 bits (111), Expect(2) = 4e-20
Identities = 21/51 (41%), Positives = 35/51 (68%)
Frame = +1
Query: 643 WIYLLKIKSNIFHVLKQFLCMVERQFQIKVKIIRSDKAKELGSSLANSDFL 795
W++L+K+KS++ VL+ F +V+ QFQ KV+IIR+D E ++ N F+
Sbjct: 604 WLFLVKLKSDVCVVLQNFFVLVQTQFQSKVQIIRTDNGSEFVNAECNKLFV 654
>ref|XP_004252487.1| PREDICTED: uncharacterized protein LOC101249998 [Solanum
lycopersicum]
Length = 836
Score = 85.9 bits (211), Expect(2) = 4e-20
Identities = 39/98 (39%), Positives = 62/98 (63%)
Frame = +2
Query: 377 SL*HQSLGHLPIFNMKNSSIFSLYFSLNDFSCDVCAKARQSKLPF*SSTICTKAVFELIH 556
+L H+ LGH+P+ ++ F+ + C +C +ARQ+++PF +S+ AVF+LIH
Sbjct: 438 ALWHRRLGHVPMKVLRKIKEFNTGSNFTIDHCHICPQARQTRMPFPNSSTNVNAVFDLIH 497
Query: 557 VDTWGPYKVTTHDGFRYFSIIVDDYSRGNGFIYLKSKA 670
+D WGPYKV THDG +YF +V+D SR ++ K+
Sbjct: 498 MDVWGPYKVATHDGMKYFLTLVNDKSRWTWTFLIRLKS 535
Score = 39.3 bits (90), Expect(2) = 4e-20
Identities = 17/40 (42%), Positives = 26/40 (65%)
Frame = +1
Query: 643 WIYLLKIKSNIFHVLKQFLCMVERQFQIKVKIIRSDKAKE 762
W +L+++KS++ VLK FL M++ QF VK+ R D E
Sbjct: 527 WTFLIRLKSDVVVVLKHFLIMIKNQFGKCVKVFRYDNGGE 566