BLASTX nr result
ID: Atropa21_contig00032264
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00032264
(613 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004243616.1| PREDICTED: probable ATP-dependent RNA helica... 176 3e-42
ref|XP_006366627.1| PREDICTED: probable ATP-dependent RNA helica... 175 8e-42
ref|XP_002520395.1| ATP-dependent RNA helicase, putative [Ricinu... 119 7e-25
ref|XP_006484996.1| PREDICTED: probable ATP-dependent RNA helica... 115 7e-24
ref|XP_006437089.1| hypothetical protein CICLE_v10033885mg, part... 115 7e-24
ref|XP_002307569.2| NUCLEAR DEIH-BOXHELICASE family protein [Pop... 112 6e-23
gb|EOX93089.1| ATP-dependent RNA helicase, putative isoform 2 [T... 112 6e-23
gb|EOX93088.1| ATP-dependent RNA helicase, putative isoform 1 [T... 112 6e-23
ref|XP_002278608.2| PREDICTED: probable ATP-dependent RNA helica... 107 3e-21
emb|CBI22072.3| unnamed protein product [Vitis vinifera] 107 3e-21
gb|ESW13440.1| hypothetical protein PHAVU_008G196300g [Phaseolus... 101 2e-19
ref|XP_003518495.1| PREDICTED: probable ATP-dependent RNA helica... 98 2e-18
ref|XP_006410180.1| hypothetical protein EUTSA_v10016152mg [Eutr... 97 3e-18
ref|XP_003545153.1| PREDICTED: probable ATP-dependent RNA helica... 97 5e-18
gb|AAB01660.1| putative RNA helicase A [Arabidopsis thaliana] 96 1e-17
dbj|BAE98834.1| hypothetical protein [Arabidopsis thaliana] 96 1e-17
ref|NP_850154.2| protein helicase in vascular tissue and tapetum... 96 1e-17
gb|AAC20715.2| hypothetical protein [Arabidopsis thaliana] 96 1e-17
ref|XP_002881133.1| hypothetical protein ARALYDRAFT_902078 [Arab... 94 3e-17
ref|XP_004491281.1| PREDICTED: probable ATP-dependent RNA helica... 91 2e-16
>ref|XP_004243616.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Solanum
lycopersicum]
Length = 1199
Score = 176 bits (447), Expect = 3e-42
Identities = 92/117 (78%), Positives = 94/117 (80%)
Frame = +2
Query: 263 MASTVPXXXXXXXXXXXXXXXXXXXEVTNVAESTRIRVAQVLEQFRASNDEVYTFESNLS 442
MAST P EVTNVAESTRIRVAQVLEQFR SNDEVYTFESNLS
Sbjct: 1 MASTAPSSSSSGVGKKRQKKGQKQQEVTNVAESTRIRVAQVLEQFRVSNDEVYTFESNLS 60
Query: 443 NRDRAAVHMLCQKMGMKSKSSGRGDQRRISIFKTKNNVDTLKGKDVLSCFKFSEEAK 613
NRDRAAVHMLC+KMGMKSKSSGRGDQRRISIFKTK N DT+KGKDVLSCFKFSEEAK
Sbjct: 61 NRDRAAVHMLCRKMGMKSKSSGRGDQRRISIFKTKQNTDTMKGKDVLSCFKFSEEAK 117
>ref|XP_006366627.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Solanum
tuberosum]
Length = 1205
Score = 175 bits (444), Expect = 8e-42
Identities = 88/92 (95%), Positives = 91/92 (98%)
Frame = +2
Query: 338 EVTNVAESTRIRVAQVLEQFRASNDEVYTFESNLSNRDRAAVHMLCQKMGMKSKSSGRGD 517
EVTNVAEST+IRVAQVLEQFRASNDEVYTFESNLSNRDRAAVHMLC+KMGMKSKSSGRGD
Sbjct: 24 EVTNVAESTQIRVAQVLEQFRASNDEVYTFESNLSNRDRAAVHMLCRKMGMKSKSSGRGD 83
Query: 518 QRRISIFKTKNNVDTLKGKDVLSCFKFSEEAK 613
QRRISIFKTK N+DTLKGKDVLSCFKFSEEAK
Sbjct: 84 QRRISIFKTKQNMDTLKGKDVLSCFKFSEEAK 115
>ref|XP_002520395.1| ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223540442|gb|EEF42011.1| ATP-dependent RNA helicase,
putative [Ricinus communis]
Length = 1229
Score = 119 bits (298), Expect = 7e-25
Identities = 56/89 (62%), Positives = 74/89 (83%)
Frame = +2
Query: 347 NVAESTRIRVAQVLEQFRASNDEVYTFESNLSNRDRAAVHMLCQKMGMKSKSSGRGDQRR 526
NVAE+TRIR++Q+LEQFRA+ D+V+TFE+NLSNR+RA VH +C+K+GMKSKS+GRG QRR
Sbjct: 15 NVAEATRIRISQILEQFRAAKDQVFTFEANLSNRERAVVHEVCKKLGMKSKSTGRGHQRR 74
Query: 527 ISIFKTKNNVDTLKGKDVLSCFKFSEEAK 613
+SI+K DT GK+ L+ FSEE+K
Sbjct: 75 VSIYKIIQKADTGNGKESLTNLTFSEESK 103
>ref|XP_006484996.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Citrus
sinensis]
Length = 1233
Score = 115 bits (289), Expect = 7e-24
Identities = 55/88 (62%), Positives = 72/88 (81%)
Frame = +2
Query: 350 VAESTRIRVAQVLEQFRASNDEVYTFESNLSNRDRAAVHMLCQKMGMKSKSSGRGDQRRI 529
VAE+TRIR++Q+L+ F AS DEVYTF++NLSNR+RA VH +C+KMGM SKSSGRG QRR+
Sbjct: 32 VAEATRIRISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRV 91
Query: 530 SIFKTKNNVDTLKGKDVLSCFKFSEEAK 613
S+ K+K V+T KGK++L FSE +K
Sbjct: 92 SVCKSKKRVETDKGKEILPSLTFSEGSK 119
>ref|XP_006437089.1| hypothetical protein CICLE_v10033885mg, partial [Citrus clementina]
gi|557539285|gb|ESR50329.1| hypothetical protein
CICLE_v10033885mg, partial [Citrus clementina]
Length = 1197
Score = 115 bits (289), Expect = 7e-24
Identities = 55/88 (62%), Positives = 72/88 (81%)
Frame = +2
Query: 350 VAESTRIRVAQVLEQFRASNDEVYTFESNLSNRDRAAVHMLCQKMGMKSKSSGRGDQRRI 529
VAE+TRIR++Q+L+ F AS DEVYTF++NLSNR+RA VH +C+KMGM SKSSGRG QRR+
Sbjct: 24 VAEATRIRISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRV 83
Query: 530 SIFKTKNNVDTLKGKDVLSCFKFSEEAK 613
S+ K+K V+T KGK++L FSE +K
Sbjct: 84 SVCKSKKRVETDKGKEILPSLTFSEGSK 111
>ref|XP_002307569.2| NUCLEAR DEIH-BOXHELICASE family protein [Populus trichocarpa]
gi|550339560|gb|EEE94565.2| NUCLEAR DEIH-BOXHELICASE
family protein [Populus trichocarpa]
Length = 1207
Score = 112 bits (281), Expect = 6e-23
Identities = 53/88 (60%), Positives = 72/88 (81%)
Frame = +2
Query: 350 VAESTRIRVAQVLEQFRASNDEVYTFESNLSNRDRAAVHMLCQKMGMKSKSSGRGDQRRI 529
VAE+T IR++++LE+FRA+ D+VYTFE+NLSN DRA VH +C+KMGMKSKSSGRG QRR+
Sbjct: 29 VAEATLIRISKILERFRAAPDQVYTFEANLSNYDRAVVHEVCKKMGMKSKSSGRGGQRRV 88
Query: 530 SIFKTKNNVDTLKGKDVLSCFKFSEEAK 613
S++K +D +KGK+ L+ FS E+K
Sbjct: 89 SVYKNTKKLDDVKGKENLTHLTFSGESK 116
>gb|EOX93089.1| ATP-dependent RNA helicase, putative isoform 2 [Theobroma cacao]
Length = 1181
Score = 112 bits (281), Expect = 6e-23
Identities = 55/89 (61%), Positives = 70/89 (78%)
Frame = +2
Query: 347 NVAESTRIRVAQVLEQFRASNDEVYTFESNLSNRDRAAVHMLCQKMGMKSKSSGRGDQRR 526
+VAESTRI++AQ LE+FR S DEVYTF+S LSN++RA VH C+KMGMKSKSSGRG QRR
Sbjct: 6 SVAESTRIQLAQTLEKFRESKDEVYTFDSTLSNKERALVHRACRKMGMKSKSSGRGSQRR 65
Query: 527 ISIFKTKNNVDTLKGKDVLSCFKFSEEAK 613
IS++K + VD +KG + L+ FS A+
Sbjct: 66 ISVYKIRGKVDNMKGMESLTNMTFSGGAQ 94
>gb|EOX93088.1| ATP-dependent RNA helicase, putative isoform 1 [Theobroma cacao]
gi|508701194|gb|EOX93090.1| ATP-dependent RNA helicase,
putative isoform 1 [Theobroma cacao]
Length = 1207
Score = 112 bits (281), Expect = 6e-23
Identities = 55/89 (61%), Positives = 70/89 (78%)
Frame = +2
Query: 347 NVAESTRIRVAQVLEQFRASNDEVYTFESNLSNRDRAAVHMLCQKMGMKSKSSGRGDQRR 526
+VAESTRI++AQ LE+FR S DEVYTF+S LSN++RA VH C+KMGMKSKSSGRG QRR
Sbjct: 6 SVAESTRIQLAQTLEKFRESKDEVYTFDSTLSNKERALVHRACRKMGMKSKSSGRGSQRR 65
Query: 527 ISIFKTKNNVDTLKGKDVLSCFKFSEEAK 613
IS++K + VD +KG + L+ FS A+
Sbjct: 66 ISVYKIRGKVDNMKGMESLTNMTFSGGAQ 94
>ref|XP_002278608.2| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Vitis
vinifera]
Length = 1231
Score = 107 bits (266), Expect = 3e-21
Identities = 52/88 (59%), Positives = 70/88 (79%)
Frame = +2
Query: 350 VAESTRIRVAQVLEQFRASNDEVYTFESNLSNRDRAAVHMLCQKMGMKSKSSGRGDQRRI 529
VAE TRIR+++ L++FR +++EVYTFE+NL+N +RA VH +C+KMGM SKSSGRG QRR+
Sbjct: 19 VAEGTRIRISRALQEFRETHNEVYTFEANLTNHERAVVHEVCRKMGMTSKSSGRGSQRRV 78
Query: 530 SIFKTKNNVDTLKGKDVLSCFKFSEEAK 613
S++KTK VDT K ++ FSEEAK
Sbjct: 79 SVYKTKKKVDT-KKEEGNPYLNFSEEAK 105
>emb|CBI22072.3| unnamed protein product [Vitis vinifera]
Length = 1190
Score = 107 bits (266), Expect = 3e-21
Identities = 52/88 (59%), Positives = 70/88 (79%)
Frame = +2
Query: 350 VAESTRIRVAQVLEQFRASNDEVYTFESNLSNRDRAAVHMLCQKMGMKSKSSGRGDQRRI 529
VAE TRIR+++ L++FR +++EVYTFE+NL+N +RA VH +C+KMGM SKSSGRG QRR+
Sbjct: 19 VAEGTRIRISRALQEFRETHNEVYTFEANLTNHERAVVHEVCRKMGMTSKSSGRGSQRRV 78
Query: 530 SIFKTKNNVDTLKGKDVLSCFKFSEEAK 613
S++KTK VDT K ++ FSEEAK
Sbjct: 79 SVYKTKKKVDT-KKEEGNPYLNFSEEAK 105
>gb|ESW13440.1| hypothetical protein PHAVU_008G196300g [Phaseolus vulgaris]
Length = 1158
Score = 101 bits (251), Expect = 2e-19
Identities = 52/92 (56%), Positives = 64/92 (69%)
Frame = +2
Query: 338 EVTNVAESTRIRVAQVLEQFRASNDEVYTFESNLSNRDRAAVHMLCQKMGMKSKSSGRGD 517
+ V E TRIR++Q+LEQFRAS DEVY FE+ LSN++RA VH + QKMG +SKSSG G
Sbjct: 15 QTPQVDEVTRIRISQILEQFRASKDEVYRFEAGLSNQERAWVHQMSQKMGFRSKSSGLGK 74
Query: 518 QRRISIFKTKNNVDTLKGKDVLSCFKFSEEAK 613
RR+S+ K K DT G + L F FSEE K
Sbjct: 75 DRRVSVQKIKKKSDTDNGFENLPHFTFSEETK 106
>ref|XP_003518495.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Glycine
max]
Length = 1162
Score = 98.2 bits (243), Expect = 2e-18
Identities = 50/89 (56%), Positives = 63/89 (70%)
Frame = +2
Query: 347 NVAESTRIRVAQVLEQFRASNDEVYTFESNLSNRDRAAVHMLCQKMGMKSKSSGRGDQRR 526
NV E TRIR++Q+LE FRASNDEVY F+++LSN++RA VH + KMG +SKS G G +RR
Sbjct: 23 NVDEVTRIRISQILEHFRASNDEVYKFDADLSNQERALVHQMALKMGFRSKSYGLGKERR 82
Query: 527 ISIFKTKNNVDTLKGKDVLSCFKFSEEAK 613
+ + K K VDT G L F FS EAK
Sbjct: 83 VCVQKMKKKVDTDNGFGSLPQFTFSGEAK 111
>ref|XP_006410180.1| hypothetical protein EUTSA_v10016152mg [Eutrema salsugineum]
gi|557111349|gb|ESQ51633.1| hypothetical protein
EUTSA_v10016152mg [Eutrema salsugineum]
Length = 1305
Score = 97.4 bits (241), Expect = 3e-18
Identities = 48/91 (52%), Positives = 68/91 (74%), Gaps = 6/91 (6%)
Frame = +2
Query: 356 ESTRIRVAQVLEQFRASNDEVYTFESNLSNRDRAAVHMLCQKMGMKSKSSGRGDQRRISI 535
E+TRI ++V+E FRAS +EVYTFE NLSN +R +H +C+KMG++SKS+GRGDQRR+SI
Sbjct: 18 EATRIWASKVIEDFRASGNEVYTFEHNLSNSERGVIHQMCRKMGIQSKSAGRGDQRRLSI 77
Query: 536 FKTKN----NVDTLK--GKDVLSCFKFSEEA 610
FK+K+ N +++K ++ L C F EA
Sbjct: 78 FKSKHRNGKNKESMKKSNREKLKCVSFPPEA 108
>ref|XP_003545153.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Glycine
max]
Length = 1164
Score = 96.7 bits (239), Expect = 5e-18
Identities = 50/89 (56%), Positives = 62/89 (69%)
Frame = +2
Query: 347 NVAESTRIRVAQVLEQFRASNDEVYTFESNLSNRDRAAVHMLCQKMGMKSKSSGRGDQRR 526
NV E TRI ++Q+LEQFRASNDEVY F++ LSN++RA VH + KMG +SKS G G +RR
Sbjct: 24 NVDEVTRICISQILEQFRASNDEVYKFDAGLSNQERALVHQMALKMGFRSKSYGLGKERR 83
Query: 527 ISIFKTKNNVDTLKGKDVLSCFKFSEEAK 613
+ + K K VDT G L F FS EAK
Sbjct: 84 VCVQKMKKKVDTDNGFGSLPPFTFSGEAK 112
>gb|AAB01660.1| putative RNA helicase A [Arabidopsis thaliana]
Length = 1291
Score = 95.5 bits (236), Expect = 1e-17
Identities = 46/87 (52%), Positives = 61/87 (70%), Gaps = 6/87 (6%)
Frame = +2
Query: 356 ESTRIRVAQVLEQFRASNDEVYTFESNLSNRDRAAVHMLCQKMGMKSKSSGRGDQRRISI 535
E+TRI +V+E FRAS +EVYTFE NLSN +R +H +C+KMG++SKSSGRG+QRR+SI
Sbjct: 19 EATRIWATKVIEDFRASGNEVYTFEHNLSNNERGVIHQMCRKMGIQSKSSGRGEQRRLSI 78
Query: 536 FKT------KNNVDTLKGKDVLSCFKF 598
FK+ KN + K+ L C F
Sbjct: 79 FKSRHKNGNKNEANEKSNKEKLKCVSF 105
>dbj|BAE98834.1| hypothetical protein [Arabidopsis thaliana]
Length = 636
Score = 95.5 bits (236), Expect = 1e-17
Identities = 46/87 (52%), Positives = 61/87 (70%), Gaps = 6/87 (6%)
Frame = +2
Query: 356 ESTRIRVAQVLEQFRASNDEVYTFESNLSNRDRAAVHMLCQKMGMKSKSSGRGDQRRISI 535
E+TRI +V+E FRAS +EVYTFE NLSN +R +H +C+KMG++SKSSGRG+QRR+SI
Sbjct: 19 EATRIWATKVIEDFRASGNEVYTFEHNLSNNERGVIHQMCRKMGIQSKSSGRGEQRRLSI 78
Query: 536 FKT------KNNVDTLKGKDVLSCFKF 598
FK+ KN + K+ L C F
Sbjct: 79 FKSRHKNGNKNEANEKSNKEKLKCVSF 105
>ref|NP_850154.2| protein helicase in vascular tissue and tapetum [Arabidopsis
thaliana] gi|330253348|gb|AEC08442.1| protein helicase
in vascular tissue and tapetum [Arabidopsis thaliana]
Length = 1299
Score = 95.5 bits (236), Expect = 1e-17
Identities = 46/87 (52%), Positives = 61/87 (70%), Gaps = 6/87 (6%)
Frame = +2
Query: 356 ESTRIRVAQVLEQFRASNDEVYTFESNLSNRDRAAVHMLCQKMGMKSKSSGRGDQRRISI 535
E+TRI +V+E FRAS +EVYTFE NLSN +R +H +C+KMG++SKSSGRG+QRR+SI
Sbjct: 19 EATRIWATKVIEDFRASGNEVYTFEHNLSNNERGVIHQMCRKMGIQSKSSGRGEQRRLSI 78
Query: 536 FKT------KNNVDTLKGKDVLSCFKF 598
FK+ KN + K+ L C F
Sbjct: 79 FKSRHKNGNKNEANEKSNKEKLKCVSF 105
>gb|AAC20715.2| hypothetical protein [Arabidopsis thaliana]
Length = 204
Score = 95.5 bits (236), Expect = 1e-17
Identities = 46/87 (52%), Positives = 61/87 (70%), Gaps = 6/87 (6%)
Frame = +2
Query: 356 ESTRIRVAQVLEQFRASNDEVYTFESNLSNRDRAAVHMLCQKMGMKSKSSGRGDQRRISI 535
E+TRI +V+E FRAS +EVYTFE NLSN +R +H +C+KMG++SKSSGRG+QRR+SI
Sbjct: 19 EATRIWATKVIEDFRASGNEVYTFEHNLSNNERGVIHQMCRKMGIQSKSSGRGEQRRLSI 78
Query: 536 FKT------KNNVDTLKGKDVLSCFKF 598
FK+ KN + K+ L C F
Sbjct: 79 FKSRHKNGNKNEANEKSNKEKLKCVSF 105
>ref|XP_002881133.1| hypothetical protein ARALYDRAFT_902078 [Arabidopsis lyrata subsp.
lyrata] gi|297326972|gb|EFH57392.1| hypothetical protein
ARALYDRAFT_902078 [Arabidopsis lyrata subsp. lyrata]
Length = 1299
Score = 94.0 bits (232), Expect = 3e-17
Identities = 45/87 (51%), Positives = 61/87 (70%), Gaps = 6/87 (6%)
Frame = +2
Query: 356 ESTRIRVAQVLEQFRASNDEVYTFESNLSNRDRAAVHMLCQKMGMKSKSSGRGDQRRISI 535
E+TRI +V+E FRAS +EVYTFE NLSN +R +H +C+KMG++SKSSGRG+QRR+SI
Sbjct: 19 EATRIWATKVIEDFRASGNEVYTFEHNLSNSERGVIHQMCRKMGIQSKSSGRGEQRRLSI 78
Query: 536 FKTK------NNVDTLKGKDVLSCFKF 598
FK++ N + K+ L C F
Sbjct: 79 FKSRHKNGKNNEANEKSNKEKLKCVSF 105
>ref|XP_004491281.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like isoform
X1 [Cicer arietinum]
Length = 1216
Score = 91.3 bits (225), Expect = 2e-16
Identities = 46/88 (52%), Positives = 60/88 (68%)
Frame = +2
Query: 350 VAESTRIRVAQVLEQFRASNDEVYTFESNLSNRDRAAVHMLCQKMGMKSKSSGRGDQRRI 529
+ E TRI +A+ +EQF+ASNDEVY FE + SN R VHML +MG KSKSSG+G +R++
Sbjct: 19 IDEPTRIHIAKTMEQFKASNDEVYKFEDDFSNEQRHYVHMLAIQMGFKSKSSGKGAERKV 78
Query: 530 SIFKTKNNVDTLKGKDVLSCFKFSEEAK 613
S+ KT + K D L F FSEE+K
Sbjct: 79 SVTKTNEKSRSEKEFDELPHFTFSEESK 106