BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00032223
         (873 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADU56211.1| gag-pol polyprotein [Solanum lycopersicum]             219   1e-63
ref|XP_004228792.1| PREDICTED: uncharacterized protein LOC101263...   217   3e-63
gb|AAT39954.1| Putative integrase, identical [Solanum demissum]       204   3e-56
gb|ABI34389.1| Polyprotein, putative [Solanum tuberosum]              210   1e-55
gb|AAT66771.2| Putative polyprotein, identical [Solanum demissum]     209   2e-55
ref|XP_006356454.1| PREDICTED: uncharacterized protein LOC102599...   207   3e-55
gb|ABI34339.1| Polyprotein, 3'-partial, putative [Solanum demissum]   216   9e-54
gb|EOY20275.1| DNA/RNA polymerases superfamily protein [Theobrom...   196   3e-52
gb|EOY08667.1| Retrotransposon protein, Ty3-gypsy subclass, puta...   196   4e-52
gb|EOY20280.1| Uncharacterized protein TCM_045699 [Theobroma cacao]   194   1e-51
gb|EOY14099.1| DNA/RNA polymerases superfamily protein [Theobrom...   196   3e-51
gb|EOY03326.1| DNA/RNA polymerases superfamily protein [Theobrom...   192   3e-51
gb|EOY08659.1| DNA/RNA polymerases superfamily protein [Theobrom...   192   3e-51
gb|EOY26451.1| DNA/RNA polymerases superfamily protein [Theobrom...   193   4e-51
gb|EOY26288.1| Retrotransposon protein, Ty3-gypsy subclass, puta...   191   4e-51
gb|EOY21678.1| DNA/RNA polymerases superfamily protein [Theobrom...   196   5e-51
emb|CAN61139.1| hypothetical protein VITISV_009489 [Vitis vinifera]   194   6e-51
gb|EOX99963.1| Uncharacterized protein TCM_009073 [Theobroma cacao]   191   8e-51
gb|EOY19683.1| Uncharacterized protein TCM_044868 [Theobroma cacao]   192   1e-50
emb|CAA73042.1| polyprotein [Ananas comosus]                          192   2e-50

>gb|ADU56211.1| gag-pol polyprotein [Solanum lycopersicum]
          Length = 367

 Score =  219 bits (559), Expect(2) = 1e-63
 Identities = 121/206 (58%), Positives = 143/206 (69%), Gaps = 12/206 (5%)
 Frame = -3

Query: 709 MDFVVGLPKTLGKFDLVWVIVDRLIKSVQFIPVQVTYNLEKLAKVYIREMVRLHGVPISI 530
           MDFVVGLPKT+GK+  +WVIVDRL KS  FIPV+VTYN EKLAK+YI E+VRLHGVP+SI
Sbjct: 1   MDFVVGLPKTMGKYSSIWVIVDRLTKSAHFIPVKVTYNAEKLAKIYISEIVRLHGVPLSI 60

Query: 529 ISNRDHQFTFHF*QTLQAELGTLLDLNTASHPQTDGQCERAIQVLEDMLRACVIDFDGHW 350
           IS+R  QFT  F + L AELGT LDL+TA HPQTDGQ ER IQVLEDM+ ACVI+F GHW
Sbjct: 61  ISDRGTQFTSKFWKILHAELGTRLDLSTAFHPQTDGQSERTIQVLEDMICACVIEFGGHW 120

Query: 349 D------QFAYKNNNHSNIDTASFEALNGRRYRAPIGW*MLLKFDR------GIQIC*GS 206
           D      +F+Y N+ HS+ID A FEAL GRR R+PIGW     FD       G  +   S
Sbjct: 121 DSFLPLAEFSYNNSYHSSIDMAPFEALYGRRCRSPIGW-----FDAFEVRPWGTDLLRDS 175

Query: 205 L*TR*SLFRKKLLTVQSLQKNICGPK 128
           +  +    ++KLL  QS QK     K
Sbjct: 176 I-EKVKSIQEKLLAAQSRQKEYADRK 200



 Score = 51.6 bits (122), Expect(2) = 1e-63
 Identities = 24/34 (70%), Positives = 29/34 (85%)
 Frame = -1

Query: 150 KKIYAVRKVRDLPFMEGEQILMKISPMKGVI*FG 49
           +K YA RKVRDL FMEGEQ+L+K+SPMK V+ FG
Sbjct: 193 QKEYADRKVRDLEFMEGEQVLLKVSPMKAVMRFG 226


>ref|XP_004228792.1| PREDICTED: uncharacterized protein LOC101263838, partial [Solanum
           lycopersicum]
          Length = 609

 Score =  217 bits (552), Expect(2) = 3e-63
 Identities = 123/211 (58%), Positives = 142/211 (67%), Gaps = 12/211 (5%)
 Frame = -3

Query: 724 WKRIAMDFVVGLPKTLGKFDLVWVIVDRLIKSVQFIPVQVTYNLEKLAKVYIREMVRLHG 545
           W+RIAMDFVVGLPKTLGKFD +WVIVDR+      IPV+VTYN EKLA++YI E+VRLHG
Sbjct: 335 WERIAMDFVVGLPKTLGKFDYIWVIVDRITMFAHLIPVKVTYNAEKLARLYISEIVRLHG 394

Query: 544 VPISIISNRDHQFTFHF*QTLQAELGTLLDLNTASHPQTDGQCERAIQVLEDMLRACVID 365
           V +SIIS R  QFT  F +TL A+LGT LDL+TA HPQTDGQ ER IQVLEDML ACVI+
Sbjct: 395 VALSIISYRGTQFTSMFWRTLHAKLGTRLDLSTAFHPQTDGQSERTIQVLEDMLCACVIE 454

Query: 364 FDGHWD------QFAYKNNNHSNIDTASFEALNGRRYRAPIGW*MLLKFDR------GIQ 221
           F GHWD      +F+Y N+ HS ID A F AL GRR  +PIGW     FD       G  
Sbjct: 455 FGGHWDNFLPLLEFSYNNSYHSGIDMAPFVALYGRRCGSPIGW-----FDAYEVTPWGTD 509

Query: 220 IC*GSL*TR*SLFRKKLLTVQSLQKNICGPK 128
           I   SL  +    ++KLL  QS QK     K
Sbjct: 510 ILRDSL-EKVKSIQEKLLVAQSRQKEYADRK 539



 Score = 52.8 bits (125), Expect(2) = 3e-63
 Identities = 24/34 (70%), Positives = 30/34 (88%)
 Frame = -1

Query: 150 KKIYAVRKVRDLPFMEGEQILMKISPMKGVI*FG 49
           +K YA RKVRDL FMEG+Q+L+K+SPMKGV+ FG
Sbjct: 532 QKEYADRKVRDLEFMEGDQVLLKVSPMKGVMRFG 565


>gb|AAT39954.1| Putative integrase, identical [Solanum demissum]
          Length = 1609

 Score =  204 bits (518), Expect(3) = 3e-56
 Identities = 100/164 (60%), Positives = 124/164 (75%), Gaps = 6/164 (3%)
 Frame = -3

Query: 727  KWKRIAMDFVVGLPKTLGKFDLVWVIVDRLIKSVQFIPVQVTYNLEKLAKVYIREMVRLH 548
            KW+RI MDF+VGLP+T    D +WVIVDRL KS  F+ VQ +++ E+LA++YIRE+VRLH
Sbjct: 1112 KWERITMDFIVGLPRTSRGVDNIWVIVDRLTKSSHFLHVQSSFSTERLARIYIREVVRLH 1171

Query: 547  GVPISIISNRDHQFTFHF*QTLQAELGTLLDLNTASHPQTDGQCERAIQVLEDMLRACVI 368
            GVP+SIIS+R   FT  F +T Q +LGT +DL+T  HPQTDGQ ER IQVLEDML+ACV+
Sbjct: 1172 GVPVSIISDRGSPFTSSFWRTFQDDLGTRVDLSTTFHPQTDGQSERTIQVLEDMLQACVM 1231

Query: 367  DFDGHWDQ------FAYKNNNHSNIDTASFEALNGRRYRAPIGW 254
            DF G WDQ      FAY NN +S+I  A FEAL GRR R+P+GW
Sbjct: 1232 DFGGQWDQFLPLAEFAYNNNYYSSIQMAPFEALYGRRCRSPVGW 1275



 Score = 34.7 bits (78), Expect(3) = 3e-56
 Identities = 15/31 (48%), Positives = 22/31 (70%)
 Frame = -1

Query: 141  YAVRKVRDLPFMEGEQILMKISPMKGVI*FG 49
            YA R+ R L F  G+++  ++SPMKGV+ FG
Sbjct: 1313 YADRRRRPLRFSVGDRVFFRVSPMKGVMRFG 1343



 Score = 28.9 bits (63), Expect(3) = 3e-56
 Identities = 12/23 (52%), Positives = 19/23 (82%)
 Frame = -2

Query: 248  ASEVRPWNTDLLRKSLDKVKFIQ 180
            ++E RP  TDLL+++LD+V+ IQ
Sbjct: 1278 STEARPRGTDLLQEALDQVRVIQ 1300


>gb|ABI34389.1| Polyprotein, putative [Solanum tuberosum]
          Length = 545

 Score =  210 bits (534), Expect(2) = 1e-55
 Identities = 103/164 (62%), Positives = 123/164 (75%), Gaps = 6/164 (3%)
 Frame = -3

Query: 727 KWKRIAMDFVVGLPKTLGKFDLVWVIVDRLIKSVQFIPVQVTYNLEKLAKVYIREMVRLH 548
           KW+RI MDFVVGLP+T    D +WVIVDRL KS  F+PV  T++ E+LA++YIRE+VRLH
Sbjct: 21  KWERITMDFVVGLPRTSRGVDSIWVIVDRLTKSAHFLPVHTTFSAERLARIYIREVVRLH 80

Query: 547 GVPISIISNRDHQFTFHF*QTLQAELGTLLDLNTASHPQTDGQCERAIQVLEDMLRACVI 368
           GVP+SIIS+R  QFT  F +  Q ELGT + L+TA HPQTDGQ ER IQVLEDMLRACV+
Sbjct: 81  GVPVSIISDRGSQFTSSFLRAFQEELGTRVHLSTAFHPQTDGQSERTIQVLEDMLRACVM 140

Query: 367 DFDGHWDQ------FAYKNNNHSNIDTASFEALNGRRYRAPIGW 254
           DF G WDQ      FAY N+ HS+I  A FEAL GRR  +P+GW
Sbjct: 141 DFGGQWDQFLPLAEFAYNNSYHSSIQMAPFEALYGRRCHSPVGW 184



 Score = 33.9 bits (76), Expect(2) = 1e-55
 Identities = 14/31 (45%), Positives = 23/31 (74%)
 Frame = -1

Query: 141 YAVRKVRDLPFMEGEQILMKISPMKGVI*FG 49
           YA ++ R L F  G+++ +++SPMKGV+ FG
Sbjct: 222 YADQRRRPLRFSVGDRVFLRVSPMKGVMRFG 252


>gb|AAT66771.2| Putative polyprotein, identical [Solanum demissum]
          Length = 1771

 Score =  209 bits (532), Expect(2) = 2e-55
 Identities = 102/164 (62%), Positives = 124/164 (75%), Gaps = 6/164 (3%)
 Frame = -3

Query: 727  KWKRIAMDFVVGLPKTLGKFDLVWVIVDRLIKSVQFIPVQVTYNLEKLAKVYIREMVRLH 548
            KW+RI MDFVVGLP+T    D +WVIVDRL KS  F+PV  T++ E+LA++YIRE+VRLH
Sbjct: 1415 KWERITMDFVVGLPRTSRGVDSIWVIVDRLTKSAHFLPVHTTFSAERLARIYIREVVRLH 1474

Query: 547  GVPISIISNRDHQFTFHF*QTLQAELGTLLDLNTASHPQTDGQCERAIQVLEDMLRACVI 368
            GVP+SIIS+R  QFT  F +  Q ELGT + L+T+ HPQTDGQ ER IQVLEDMLRACV+
Sbjct: 1475 GVPVSIISDRGSQFTSSFWRAFQEELGTRVHLSTSFHPQTDGQSERTIQVLEDMLRACVM 1534

Query: 367  DFDGHWDQ------FAYKNNNHSNIDTASFEALNGRRYRAPIGW 254
            DF G W+Q      FAY N+ HS+I  A FEAL GRR R+P+GW
Sbjct: 1535 DFGGQWEQFLPLAEFAYNNSYHSSIQMAPFEALYGRRCRSPVGW 1578



 Score = 33.9 bits (76), Expect(2) = 2e-55
 Identities = 14/31 (45%), Positives = 23/31 (74%)
 Frame = -1

Query: 141  YAVRKVRDLPFMEGEQILMKISPMKGVI*FG 49
            YA ++ R L F  G+++ +++SPMKGV+ FG
Sbjct: 1616 YADQRRRPLRFSVGDRVFLRVSPMKGVMRFG 1646


>ref|XP_006356454.1| PREDICTED: uncharacterized protein LOC102599406 [Solanum tuberosum]
          Length = 859

 Score =  207 bits (526), Expect(2) = 3e-55
 Identities = 101/164 (61%), Positives = 123/164 (75%), Gaps = 6/164 (3%)
 Frame = -3

Query: 727 KWKRIAMDFVVGLPKTLGKFDLVWVIVDRLIKSVQFIPVQVTYNLEKLAKVYIREMVRLH 548
           KW+R+ MDFVVGLP+T    + +WVIVDRL KS  FIPV  +Y+ E+LA++YIRE+VRLH
Sbjct: 471 KWERVTMDFVVGLPRTSRGLNSIWVIVDRLTKSANFIPVHTSYSAERLARIYIREVVRLH 530

Query: 547 GVPISIISNRDHQFTFHF*QTLQAELGTLLDLNTASHPQTDGQCERAIQVLEDMLRACVI 368
           G+P+SIIS+R   FT  F +T Q ELGT +DL T  HPQTDGQ ER I+VLEDMLRACV+
Sbjct: 531 GMPVSIISDRGPHFTSSFWRTFQDELGTRVDLCTTFHPQTDGQSERTIKVLEDMLRACVM 590

Query: 367 DFDGHWDQ------FAYKNNNHSNIDTASFEALNGRRYRAPIGW 254
           DF G WDQ      FAY N+ HS+I  A FEAL GRR R+P+GW
Sbjct: 591 DFGGQWDQHLPLAEFAYNNSYHSSIQMAPFEALYGRRCRSPVGW 634



 Score = 36.2 bits (82), Expect(2) = 3e-55
 Identities = 16/31 (51%), Positives = 22/31 (70%)
 Frame = -1

Query: 141 YAVRKVRDLPFMEGEQILMKISPMKGVI*FG 49
           YA R+ R L F  G ++ +++SPMKGVI FG
Sbjct: 672 YANRRRRPLKFAVGNRVFLRVSPMKGVIRFG 702


>gb|ABI34339.1| Polyprotein, 3'-partial, putative [Solanum demissum]
          Length = 1475

 Score =  216 bits (550), Expect = 9e-54
 Identities = 105/164 (64%), Positives = 128/164 (78%), Gaps = 6/164 (3%)
 Frame = -3

Query: 727  KWKRIAMDFVVGLPKTLGKFDLVWVIVDRLIKSVQFIPVQVTYNLEKLAKVYIREMVRLH 548
            KW+RI MDF+VGLP+T    D +WVIVDRL KS  F+PVQ +++ E+LA++YIRE+VRLH
Sbjct: 1259 KWERITMDFIVGLPRTPRGVDSIWVIVDRLTKSAHFLPVQCSFSAERLARIYIREVVRLH 1318

Query: 547  GVPISIISNRDHQFTFHF*QTLQAELGTLLDLNTASHPQTDGQCERAIQVLEDMLRACVI 368
            GVP+SIIS+R  QFT +F +T Q ELGT +DL+TA HPQTDGQ ER IQVLEDMLRACV+
Sbjct: 1319 GVPVSIISDRGSQFTSNFWRTFQDELGTRVDLSTAFHPQTDGQSERTIQVLEDMLRACVM 1378

Query: 367  DFDGHWDQ------FAYKNNNHSNIDTASFEALNGRRYRAPIGW 254
            DF G WDQ      FAY N+ HS+I  A FEAL GRR R+P+GW
Sbjct: 1379 DFGGQWDQFLPLAEFAYNNSYHSSIQMAPFEALYGRRCRSPVGW 1422


>gb|EOY20275.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
          Length = 562

 Score =  196 bits (497), Expect(2) = 3e-52
 Identities = 95/164 (57%), Positives = 118/164 (71%), Gaps = 6/164 (3%)
 Frame = -3

Query: 727 KWKRIAMDFVVGLPKTLGKFDLVWVIVDRLIKSVQFIPVQVTYNLEKLAKVYIREMVRLH 548
           KW+ IAMDFV GLP+T G +D +W+++DRL KS  F+PV+ TY   + A+VY+ E+VRLH
Sbjct: 276 KWEHIAMDFVTGLPRTSGGYDSIWIVMDRLTKSAHFLPVKTTYGAAQYARVYVDEIVRLH 335

Query: 547 GVPISIISNRDHQFTFHF*QTLQAELGTLLDLNTASHPQTDGQCERAIQVLEDMLRACVI 368
           G+PISI+S+R+ QFT  F   LQ  LGT LD +TA HPQTDGQ ER IQ LEDMLRACVI
Sbjct: 336 GIPISIVSDREAQFTSRFWGKLQEALGTKLDFSTAFHPQTDGQSERTIQTLEDMLRACVI 395

Query: 367 DFDGHWDQ------FAYKNNNHSNIDTASFEALNGRRYRAPIGW 254
           D    W+Q      FAY N+  ++I  A FEAL GRR R+PIGW
Sbjct: 396 DLGVRWEQYLPLVEFAYNNSFQTSIQMAPFEALYGRRCRSPIGW 439



 Score = 37.0 bits (84), Expect(2) = 3e-52
 Identities = 16/34 (47%), Positives = 23/34 (67%)
 Frame = -1

Query: 150 KKIYAVRKVRDLPFMEGEQILMKISPMKGVI*FG 49
           +K YA  + RDL F  G+ + +K+SP KGV+ FG
Sbjct: 474 QKSYADNRRRDLEFQVGDHVFLKVSPTKGVMRFG 507


>gb|EOY08667.1| Retrotransposon protein, Ty3-gypsy subclass, putative [Theobroma
           cacao]
          Length = 521

 Score =  196 bits (497), Expect(2) = 4e-52
 Identities = 96/164 (58%), Positives = 117/164 (71%), Gaps = 6/164 (3%)
 Frame = -3

Query: 727 KWKRIAMDFVVGLPKTLGKFDLVWVIVDRLIKSVQFIPVQVTYNLEKLAKVYIREMVRLH 548
           KW+ IAMDFV GLP+T G +D +W++VDRL KS  F+PV+ TY   + A+VY+ E+VRLH
Sbjct: 169 KWEHIAMDFVTGLPRTSGGYDSIWIVVDRLTKSAHFLPVKTTYGAAQYARVYVDEIVRLH 228

Query: 547 GVPISIISNRDHQFTFHF*QTLQAELGTLLDLNTASHPQTDGQCERAIQVLEDMLRACVI 368
           G+PISI+S+R  QFT  F   LQ  LGT LD +TA HPQTDGQ ER IQ LEDMLRACVI
Sbjct: 229 GIPISIVSDRGAQFTSRFWGKLQEALGTKLDFSTAFHPQTDGQSERTIQTLEDMLRACVI 288

Query: 367 DFDGHWDQ------FAYKNNNHSNIDTASFEALNGRRYRAPIGW 254
           D    W+Q      FAY N+  ++I  A FEAL GRR R+PIGW
Sbjct: 289 DLGVRWEQYLPLVEFAYNNSFQTSIQMAPFEALYGRRCRSPIGW 332



 Score = 36.6 bits (83), Expect(2) = 4e-52
 Identities = 16/33 (48%), Positives = 22/33 (66%)
 Frame = -1

Query: 147 KIYAVRKVRDLPFMEGEQILMKISPMKGVI*FG 49
           K YA  + RDL F  G+ + +K+SP KGV+ FG
Sbjct: 368 KSYADNRRRDLEFQVGDHVFLKVSPTKGVMRFG 400


>gb|EOY20280.1| Uncharacterized protein TCM_045699 [Theobroma cacao]
          Length = 415

 Score =  194 bits (492), Expect(2) = 1e-51
 Identities = 106/204 (51%), Positives = 137/204 (67%), Gaps = 9/204 (4%)
 Frame = -3

Query: 727 KWKRIAMDFVVGLPKTLGKFDLVWVIVDRLIKSVQFIPVQVTYNLEKLAKVYIREMVRLH 548
           KW+ IAMDFV GLP+T G +D +W++VDRL KS  F+ V+ TY   + A+VY+ E+VRLH
Sbjct: 63  KWEHIAMDFVTGLPRTSGGYDSIWIVVDRLTKSAHFLLVKTTYGAAQYARVYVDEIVRLH 122

Query: 547 GVPISIISNRDHQFTFHF*QTLQAELGTLLDLNTASHPQTDGQCERAIQVLEDMLRACVI 368
           G+PISI+S+R+ QFT  F   LQ  LGT LD +TA HPQTDGQ ER IQ LEDMLRACVI
Sbjct: 123 GIPISIVSDREAQFTSRFWGKLQEALGTKLDFSTAFHPQTDGQSERTIQTLEDMLRACVI 182

Query: 367 DFDGHWDQ------FAYKNNNHSNIDTASFEALNGRRYRAPIGW*MLLKFDR---GIQIC 215
           D    W+Q      FAY N+  ++I  A FEAL GRR R+PIGW  L   +R   G ++ 
Sbjct: 183 DLGVKWEQYLPLVEFAYNNSFQTSIQMAPFEALYGRRCRSPIGW--LEVGERKLLGPELV 240

Query: 214 *GSL*TR*SLFRKKLLTVQSLQKN 143
             +   +  + R+K+LT QS QK+
Sbjct: 241 QDAT-EKIHMIRQKMLTTQSRQKS 263



 Score = 37.0 bits (84), Expect(2) = 1e-51
 Identities = 16/34 (47%), Positives = 23/34 (67%)
 Frame = -1

Query: 150 KKIYAVRKVRDLPFMEGEQILMKISPMKGVI*FG 49
           +K YA  + RDL F  G+ + +K+SP KGV+ FG
Sbjct: 261 QKSYADNRRRDLEFQVGDHVFLKVSPTKGVMRFG 294


>gb|EOY14099.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
          Length = 1502

 Score =  196 bits (497), Expect(2) = 3e-51
 Identities = 96/164 (58%), Positives = 117/164 (71%), Gaps = 6/164 (3%)
 Frame = -3

Query: 727  KWKRIAMDFVVGLPKTLGKFDLVWVIVDRLIKSVQFIPVQVTYNLEKLAKVYIREMVRLH 548
            KW+ IAMDFV GLP+T G +D +W++VDRL KS  F+PV+ TY   + A+VY+ E+VRLH
Sbjct: 1197 KWEHIAMDFVTGLPRTSGGYDSIWIVVDRLTKSAHFLPVKTTYGAAQYARVYVDEIVRLH 1256

Query: 547  GVPISIISNRDHQFTFHF*QTLQAELGTLLDLNTASHPQTDGQCERAIQVLEDMLRACVI 368
            G+PISI+S+R  QFT  F   LQ  LGT LD +TA HPQTDGQ ER IQ LEDMLRACVI
Sbjct: 1257 GIPISIVSDRGAQFTSRFWGKLQEALGTKLDFSTAFHPQTDGQSERTIQTLEDMLRACVI 1316

Query: 367  DFDGHWDQ------FAYKNNNHSNIDTASFEALNGRRYRAPIGW 254
            D    W+Q      FAY N+  ++I  A FEAL GRR R+PIGW
Sbjct: 1317 DLGVRWEQYLPLVEFAYNNSFQTSIQMAPFEALYGRRCRSPIGW 1360



 Score = 33.9 bits (76), Expect(2) = 3e-51
 Identities = 14/31 (45%), Positives = 21/31 (67%)
 Frame = -1

Query: 150  KKIYAVRKVRDLPFMEGEQILMKISPMKGVI 58
            +K YA  + RDL F  G+ + +K+SP KGV+
Sbjct: 1395 QKSYADNRRRDLEFQVGDHVFLKVSPTKGVM 1425


>gb|EOY03326.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
          Length = 1447

 Score =  192 bits (489), Expect(2) = 3e-51
 Identities = 95/164 (57%), Positives = 116/164 (70%), Gaps = 6/164 (3%)
 Frame = -3

Query: 727  KWKRIAMDFVVGLPKTLGKFDLVWVIVDRLIKSVQFIPVQVTYNLEKLAKVYIREMVRLH 548
            KW+ IAMDFV GLP+T G +D +W++VDRL KS  F+PV+ TY   + A+VY+ E+VRLH
Sbjct: 1095 KWEHIAMDFVTGLPRTSGGYDSIWIVVDRLTKSAHFLPVKTTYGAAQYARVYVDEIVRLH 1154

Query: 547  GVPISIISNRDHQFTFHF*QTLQAELGTLLDLNTASHPQTDGQCERAIQVLEDMLRACVI 368
            G+PISI+S+R  QFT  F   LQ  LGT LD +TA HPQTDGQ ER IQ LE MLRACVI
Sbjct: 1155 GIPISIVSDRGAQFTSRFWGKLQEALGTKLDFSTAFHPQTDGQSERTIQTLEAMLRACVI 1214

Query: 367  DFDGHWDQ------FAYKNNNHSNIDTASFEALNGRRYRAPIGW 254
            D    W+Q      FAY N+  ++I  A FEAL GRR R+PIGW
Sbjct: 1215 DLGVRWEQYLPLVEFAYNNSFQTSIQMAPFEALYGRRCRSPIGW 1258



 Score = 37.0 bits (84), Expect(2) = 3e-51
 Identities = 16/34 (47%), Positives = 23/34 (67%)
 Frame = -1

Query: 150  KKIYAVRKVRDLPFMEGEQILMKISPMKGVI*FG 49
            +K YA  + RDL F  G+ + +K+SP KGV+ FG
Sbjct: 1293 QKSYADNRRRDLEFQVGDHVFLKVSPTKGVMRFG 1326


>gb|EOY08659.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
          Length = 937

 Score =  192 bits (488), Expect(2) = 3e-51
 Identities = 95/164 (57%), Positives = 116/164 (70%), Gaps = 6/164 (3%)
 Frame = -3

Query: 727  KWKRIAMDFVVGLPKTLGKFDLVWVIVDRLIKSVQFIPVQVTYNLEKLAKVYIREMVRLH 548
            KW+ IAMDFV GLP+T G +D +W++VDRL KS  F+PV+ TY   + A+VY+ E+VRLH
Sbjct: 557  KWEHIAMDFVTGLPRTNGGYDSIWIVVDRLTKSAHFLPVKTTYGAAQYARVYVDEIVRLH 616

Query: 547  GVPISIISNRDHQFTFHF*QTLQAELGTLLDLNTASHPQTDGQCERAIQVLEDMLRACVI 368
            G+PISI+S+R  QFT  F   LQ  LGT LD +TA HPQTDGQ E  IQ LEDMLRACVI
Sbjct: 617  GIPISIVSDRGAQFTSRFWGKLQEALGTKLDFSTAFHPQTDGQSEWTIQTLEDMLRACVI 676

Query: 367  DFDGHWDQ------FAYKNNNHSNIDTASFEALNGRRYRAPIGW 254
            D    W+Q      FAY N+  ++I  A FEAL GRR R+PIGW
Sbjct: 677  DLGVRWEQYLPLVEFAYNNSFQTSIQMAPFEALYGRRCRSPIGW 720



 Score = 37.0 bits (84), Expect(2) = 3e-51
 Identities = 16/34 (47%), Positives = 23/34 (67%)
 Frame = -1

Query: 150 KKIYAVRKVRDLPFMEGEQILMKISPMKGVI*FG 49
           +K YA  + RDL F  G+ + +K+SP KGV+ FG
Sbjct: 755 QKSYADNRRRDLEFQVGDHVFLKVSPTKGVMRFG 788


>gb|EOY26451.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
          Length = 679

 Score =  193 bits (491), Expect(2) = 4e-51
 Identities = 95/164 (57%), Positives = 116/164 (70%), Gaps = 6/164 (3%)
 Frame = -3

Query: 727 KWKRIAMDFVVGLPKTLGKFDLVWVIVDRLIKSVQFIPVQVTYNLEKLAKVYIREMVRLH 548
           KW+ IAMDFV GLP+T G +D +W++VD+L KS  F+PV+ TY     A+VY+ E+VRLH
Sbjct: 327 KWEHIAMDFVTGLPRTSGGYDSIWIVVDQLTKSAHFLPVKTTYGAAHYARVYVDEIVRLH 386

Query: 547 GVPISIISNRDHQFTFHF*QTLQAELGTLLDLNTASHPQTDGQCERAIQVLEDMLRACVI 368
           G+PISI+S+R  QFT  F   LQ  LGT LD +TA HPQTDGQ ER IQ LEDMLRACVI
Sbjct: 387 GIPISIVSDRGAQFTSRFWGKLQEALGTKLDFSTAFHPQTDGQSERTIQTLEDMLRACVI 446

Query: 367 DFDGHWDQ------FAYKNNNHSNIDTASFEALNGRRYRAPIGW 254
           D    W+Q      FAY N+  ++I  A FEAL GRR R+PIGW
Sbjct: 447 DLGVRWEQYLPLVEFAYNNSFQTSIQMAPFEALYGRRCRSPIGW 490



 Score = 35.8 bits (81), Expect(2) = 4e-51
 Identities = 16/34 (47%), Positives = 22/34 (64%)
 Frame = -1

Query: 150 KKIYAVRKVRDLPFMEGEQILMKISPMKGVI*FG 49
           +K YA  + RDL F  G+ + +K SP KGV+ FG
Sbjct: 525 QKSYADNRRRDLEFQVGDHVFLKFSPTKGVMRFG 558


>gb|EOY26288.1| Retrotransposon protein, Ty3-gypsy subclass, putative [Theobroma
           cacao]
          Length = 308

 Score =  191 bits (485), Expect(2) = 4e-51
 Identities = 96/166 (57%), Positives = 117/166 (70%), Gaps = 8/166 (4%)
 Frame = -3

Query: 727 KWKR--IAMDFVVGLPKTLGKFDLVWVIVDRLIKSVQFIPVQVTYNLEKLAKVYIREMVR 554
           +WKR  IAMDFV GLP+T G +D +W++VDRL KS  F+PV+ TY   + A+VY+ E+VR
Sbjct: 53  EWKREHIAMDFVTGLPRTSGGYDSIWIVVDRLTKSAHFLPVKTTYGAAQYARVYVDEIVR 112

Query: 553 LHGVPISIISNRDHQFTFHF*QTLQAELGTLLDLNTASHPQTDGQCERAIQVLEDMLRAC 374
           LHG+PISI+S+R  QFT  F   LQ  LGT LD +T  HPQTDGQ ER IQ LEDMLRAC
Sbjct: 113 LHGIPISIVSDRGAQFTSRFWGKLQEALGTKLDFSTTFHPQTDGQSERTIQTLEDMLRAC 172

Query: 373 VIDFDGHWDQ------FAYKNNNHSNIDTASFEALNGRRYRAPIGW 254
           VID    W+Q      FAY N+  ++I  A FEAL GRR R+PIGW
Sbjct: 173 VIDLGVRWEQYLPLVEFAYNNSFQTSIQMAPFEALYGRRCRSPIGW 218



 Score = 38.1 bits (87), Expect(2) = 4e-51
 Identities = 16/33 (48%), Positives = 23/33 (69%)
 Frame = -1

Query: 147 KIYAVRKVRDLPFMEGEQILMKISPMKGVI*FG 49
           K+YA  + RDL F  G+ + +K+SP KGV+ FG
Sbjct: 254 KLYADNRRRDLEFQVGDHVFLKVSPTKGVMRFG 286


>gb|EOY21678.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
          Length = 448

 Score =  196 bits (497), Expect(2) = 5e-51
 Identities = 96/164 (58%), Positives = 117/164 (71%), Gaps = 6/164 (3%)
 Frame = -3

Query: 727 KWKRIAMDFVVGLPKTLGKFDLVWVIVDRLIKSVQFIPVQVTYNLEKLAKVYIREMVRLH 548
           KW+ IAMDFV GLP+T G +D +W++VDRL KS  F+PV+ TY   + A+VY+ E+VRLH
Sbjct: 96  KWEHIAMDFVTGLPRTSGGYDSIWIVVDRLTKSAHFLPVKTTYGAAQYARVYVDEIVRLH 155

Query: 547 GVPISIISNRDHQFTFHF*QTLQAELGTLLDLNTASHPQTDGQCERAIQVLEDMLRACVI 368
           G+PISI+S+R  QFT  F   LQ  LGT LD +TA HPQTDGQ ER IQ LEDMLRACVI
Sbjct: 156 GIPISIVSDRGAQFTSRFWGKLQEALGTKLDFSTAFHPQTDGQSERTIQTLEDMLRACVI 215

Query: 367 DFDGHWDQ------FAYKNNNHSNIDTASFEALNGRRYRAPIGW 254
           D    W+Q      FAY N+  ++I  A FEAL GRR R+PIGW
Sbjct: 216 DLGVRWEQYLPLVEFAYNNSFQTSIQMAPFEALYGRRCRSPIGW 259



 Score = 33.1 bits (74), Expect(2) = 5e-51
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = -1

Query: 150 KKIYAVRKVRDLPFMEGEQILMKISPMKGVI*FG 49
           +K YA  + R L F  G+ + +K+SP KG++ FG
Sbjct: 294 QKSYADNRRRYLEFQVGDHVFLKVSPTKGIMRFG 327


>emb|CAN61139.1| hypothetical protein VITISV_009489 [Vitis vinifera]
          Length = 984

 Score =  194 bits (493), Expect(2) = 6e-51
 Identities = 90/164 (54%), Positives = 123/164 (75%), Gaps = 6/164 (3%)
 Frame = -3

Query: 727  KWKRIAMDFVVGLPKTLGKFDLVWVIVDRLIKSVQFIPVQVTYNLEKLAKVYIREMVRLH 548
            KW+ I MDFV+GLP+TLG  + +WVIVDRL KS  F+P++V ++L++LA +Y++E+VR+H
Sbjct: 624  KWEHITMDFVIGLPRTLGGNNAIWVIVDRLTKSAHFLPMKVNFSLDRLASLYVKEIVRMH 683

Query: 547  GVPISIISNRDHQFTFHF*QTLQAELGTLLDLNTASHPQTDGQCERAIQVLEDMLRACVI 368
            GVP+SI+S+RD +FT  F  +LQ  LGT L  +TA HPQTDGQ ER IQVLED+ RAC++
Sbjct: 684  GVPVSIVSDRDPRFTSRFWHSLQKSLGTKLSFSTAFHPQTDGQSERVIQVLEDLFRACIL 743

Query: 367  DFDGHWD------QFAYKNNNHSNIDTASFEALNGRRYRAPIGW 254
            D  G+WD      +FAY N+  ++I  A FEAL GR+ R+PI W
Sbjct: 744  DLQGNWDDHLPLVEFAYNNSFQASIGMAPFEALYGRKCRSPICW 787



 Score = 34.3 bits (77), Expect(2) = 6e-51
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = -1

Query: 147 KIYAVRKVRDLPFMEGEQILMKISPMKGVI*FG 49
           K Y   + RDL F  G+ + +K+SPMK V+ FG
Sbjct: 823 KSYVDHRRRDLEFEVGDHVFLKVSPMKSVMRFG 855


>gb|EOX99963.1| Uncharacterized protein TCM_009073 [Theobroma cacao]
          Length = 421

 Score =  191 bits (485), Expect(2) = 8e-51
 Identities = 94/164 (57%), Positives = 116/164 (70%), Gaps = 6/164 (3%)
 Frame = -3

Query: 727 KWKRIAMDFVVGLPKTLGKFDLVWVIVDRLIKSVQFIPVQVTYNLEKLAKVYIREMVRLH 548
           KW+ IAMDFV GLP+T G +D +W++VDRL KS  F+ V+ TY   + A+VY+ E+VRLH
Sbjct: 55  KWEHIAMDFVTGLPRTSGGYDSIWIVVDRLTKSAHFLSVKTTYGAAQYARVYVDEIVRLH 114

Query: 547 GVPISIISNRDHQFTFHF*QTLQAELGTLLDLNTASHPQTDGQCERAIQVLEDMLRACVI 368
           G+PISI+S+R  QFT  F   LQ  LGT LD +TA HPQTDGQ ER IQ LEDMLRACVI
Sbjct: 115 GIPISIVSDRGAQFTSRFWGKLQEALGTKLDFSTAFHPQTDGQSERTIQTLEDMLRACVI 174

Query: 367 DFDGHWDQ------FAYKNNNHSNIDTASFEALNGRRYRAPIGW 254
           D    W+Q      FAY N+  ++I  A F+AL GRR R+PIGW
Sbjct: 175 DLGVRWEQYLPLVEFAYNNSFQTSIQMAPFKALYGRRCRSPIGW 218



 Score = 37.0 bits (84), Expect(2) = 8e-51
 Identities = 16/34 (47%), Positives = 23/34 (67%)
 Frame = -1

Query: 150 KKIYAVRKVRDLPFMEGEQILMKISPMKGVI*FG 49
           +K YA  + RDL F  G+ + +K+SP KGV+ FG
Sbjct: 253 QKSYADNRRRDLEFQVGDHVFLKVSPTKGVMRFG 286


>gb|EOY19683.1| Uncharacterized protein TCM_044868 [Theobroma cacao]
          Length = 403

 Score =  192 bits (489), Expect(2) = 1e-50
 Identities = 94/164 (57%), Positives = 116/164 (70%), Gaps = 6/164 (3%)
 Frame = -3

Query: 727 KWKRIAMDFVVGLPKTLGKFDLVWVIVDRLIKSVQFIPVQVTYNLEKLAKVYIREMVRLH 548
           KW+ IAMDFV GLP+T G +D +W++VDRL KS  F+PV+ TY   + A+VY+ E+VRLH
Sbjct: 51  KWEHIAMDFVTGLPRTSGGYDSIWIVVDRLTKSAHFLPVKTTYGAAQYARVYVDEIVRLH 110

Query: 547 GVPISIISNRDHQFTFHF*QTLQAELGTLLDLNTASHPQTDGQCERAIQVLEDMLRACVI 368
           G+PISI+S+R  QFT  F   LQ  LGT LD +TA HPQT GQ ER IQ LEDMLRACVI
Sbjct: 111 GIPISIVSDRGAQFTSRFWGKLQEALGTKLDFSTAFHPQTGGQSERTIQTLEDMLRACVI 170

Query: 367 DFDGHWDQ------FAYKNNNHSNIDTASFEALNGRRYRAPIGW 254
           D    W+Q      FAY N+  ++I  A FEAL GRR R+P+GW
Sbjct: 171 DLGVRWEQYLPLVEFAYNNSFQTSIQMAPFEALYGRRCRSPVGW 214



 Score = 34.7 bits (78), Expect(2) = 1e-50
 Identities = 15/34 (44%), Positives = 22/34 (64%)
 Frame = -1

Query: 150 KKIYAVRKVRDLPFMEGEQILMKISPMKGVI*FG 49
           +K YA  + RDL F  G+ + +K+ P KGV+ FG
Sbjct: 249 QKSYADNRRRDLEFQVGDHVFLKVLPTKGVMRFG 282


>emb|CAA73042.1| polyprotein [Ananas comosus]
          Length = 871

 Score =  192 bits (487), Expect(2) = 2e-50
 Identities = 94/164 (57%), Positives = 118/164 (71%), Gaps = 6/164 (3%)
 Frame = -3

Query: 727  KWKRIAMDFVVGLPKTLGKFDLVWVIVDRLIKSVQFIPVQVTYNLEKLAKVYIREMVRLH 548
            KW++I MDFV GLP++    D +WVIVDRL KS  FIP+  T+  E+LA+VY+ E+VRLH
Sbjct: 595  KWEKITMDFVTGLPRSQAGHDAIWVIVDRLTKSAHFIPIHTTWTGERLAQVYLDEIVRLH 654

Query: 547  GVPISIISNRDHQFTFHF*QTLQAELGTLLDLNTASHPQTDGQCERAIQVLEDMLRACVI 368
            GVP SI+S+RD +F  HF ++LQ  LGT LD +TA HPQ+DGQ ER IQ LEDMLRACVI
Sbjct: 655  GVPTSIVSDRDTRFVSHFWRSLQDALGTRLDFSTAFHPQSDGQSERTIQTLEDMLRACVI 714

Query: 367  DFDGHWDQ------FAYKNNNHSNIDTASFEALNGRRYRAPIGW 254
            DF G W Q      FAY N+  ++I  A FEAL GR+ R+P+ W
Sbjct: 715  DFQGGWSQHLPMAEFAYNNSYQASIKMAPFEALYGRKCRSPLHW 758



 Score = 34.7 bits (78), Expect(2) = 2e-50
 Identities = 14/34 (41%), Positives = 23/34 (67%)
 Frame = -1

Query: 150 KKIYAVRKVRDLPFMEGEQILMKISPMKGVI*FG 49
           ++ YA R+ RDL F  G+ + +K+SP +G+  FG
Sbjct: 793 QRSYADRRRRDLEFQVGDHVFLKVSPTRGIKRFG 826