BLASTX nr result
ID: Atropa21_contig00032210
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00032210
(704 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAV31171.1| Putative polyprotein, identical [Solanum tuberosum] 49 2e-08
ref|XP_004248925.1| PREDICTED: uncharacterized protein LOC101262... 45 3e-08
gb|ABG37663.1| CCHC-type integrase [Populus trichocarpa] 45 1e-07
ref|XP_006364939.1| PREDICTED: uncharacterized protein LOC102581... 50 3e-07
gb|AAT38724.1| Putative retrotransposon protein, identical [Sola... 50 3e-07
gb|AAT38744.1| Putative gag-pol polyprotein, identical [Solanum ... 50 3e-07
gb|AAT39297.2| Gag-pol protein, putative [Solanum demissum] 47 6e-07
gb|ABI34354.1| Retrotransposon gag protein [Solanum demissum] 45 1e-06
ref|XP_004295405.1| PREDICTED: probable leucine-rich repeat rece... 40 1e-06
ref|XP_004243106.1| PREDICTED: uncharacterized protein LOC101256... 48 1e-06
gb|EOX94130.1| DNA/RNA polymerases superfamily protein [Theobrom... 46 4e-06
ref|XP_006353601.1| PREDICTED: uncharacterized protein LOC102586... 44 1e-05
>gb|AAV31171.1| Putative polyprotein, identical [Solanum tuberosum]
Length = 1487
Score = 48.9 bits (115), Expect(2) = 2e-08
Identities = 21/32 (65%), Positives = 27/32 (84%)
Frame = +2
Query: 47 FSSISSPITKLTHKANKFQWTDACERSFKS*K 142
FSSI+SP+TKLT K KFQW++ACE+SF+ K
Sbjct: 828 FSSIASPLTKLTQKTVKFQWSEACEKSFQELK 859
Score = 36.2 bits (82), Expect(2) = 2e-08
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +3
Query: 135 VKNRLTSTIMLAPPKRTNRYVVYCDASRVVL 227
+K RL ST +L P+ T +VVYCDASR+ L
Sbjct: 858 LKKRLISTPVLTLPEGTQSFVVYCDASRIGL 888
>ref|XP_004248925.1| PREDICTED: uncharacterized protein LOC101262061 [Solanum
lycopersicum]
Length = 374
Score = 44.7 bits (104), Expect(2) = 3e-08
Identities = 18/32 (56%), Positives = 27/32 (84%)
Frame = +2
Query: 47 FSSISSPITKLTHKANKFQWTDACERSFKS*K 142
FSSI++P+T LT K +KF+WT+ACE++F+ K
Sbjct: 225 FSSIAAPLTILTKKKDKFEWTEACEKNFQELK 256
Score = 39.7 bits (91), Expect(2) = 3e-08
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = +3
Query: 135 VKNRLTSTIMLAPPKRTNRYVVYCDASRVVL 227
+K+RLTS ++L PK Y+VYCDASRV L
Sbjct: 255 LKDRLTSVLVLTLPKCRENYIVYCDASRVGL 285
>gb|ABG37663.1| CCHC-type integrase [Populus trichocarpa]
Length = 2037
Score = 45.4 bits (106), Expect(2) = 1e-07
Identities = 19/28 (67%), Positives = 24/28 (85%)
Frame = +2
Query: 47 FSSISSPITKLTHKANKFQWTDACERSF 130
FS IS+P+TKLT K KFQW++ACE+SF
Sbjct: 1739 FSRISAPLTKLTQKNVKFQWSEACEKSF 1766
Score = 37.0 bits (84), Expect(2) = 1e-07
Identities = 18/33 (54%), Positives = 22/33 (66%)
Frame = +3
Query: 129 LRVKNRLTSTIMLAPPKRTNRYVVYCDASRVVL 227
L +K RLT+ +LA P + Y VYCDASRV L
Sbjct: 1767 LELKERLTTAPVLAVPSGSGGYTVYCDASRVGL 1799
>ref|XP_006364939.1| PREDICTED: uncharacterized protein LOC102581051 [Solanum tuberosum]
Length = 1946
Score = 50.1 bits (118), Expect(2) = 3e-07
Identities = 22/32 (68%), Positives = 27/32 (84%)
Frame = +2
Query: 47 FSSISSPITKLTHKANKFQWTDACERSFKS*K 142
FSSI+SP+TKLT K KF+WTD CERSF++ K
Sbjct: 1256 FSSIASPMTKLTQKKAKFEWTDECERSFQTLK 1287
Score = 31.2 bits (69), Expect(2) = 3e-07
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +3
Query: 135 VKNRLTSTIMLAPPKRTNRYVVYCDASRVVL 227
+K++L S +L+ P +VVYCDASRV L
Sbjct: 1286 LKDKLVSAPILSLPDGLEGFVVYCDASRVGL 1316
>gb|AAT38724.1| Putative retrotransposon protein, identical [Solanum demissum]
Length = 1602
Score = 50.1 bits (118), Expect(2) = 3e-07
Identities = 21/32 (65%), Positives = 27/32 (84%)
Frame = +2
Query: 47 FSSISSPITKLTHKANKFQWTDACERSFKS*K 142
FSSI+SP+TKLT K KFQW++ACE+SF+ K
Sbjct: 911 FSSIASPLTKLTQKTGKFQWSEACEKSFQELK 942
Score = 31.2 bits (69), Expect(2) = 3e-07
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +3
Query: 135 VKNRLTSTIMLAPPKRTNRYVVYCDASRVVL 227
+K RL + +L P+ T VVYCDASR+ L
Sbjct: 941 LKKRLITAPVLTLPEGTQGLVVYCDASRIGL 971
>gb|AAT38744.1| Putative gag-pol polyprotein, identical [Solanum demissum]
Length = 1515
Score = 50.1 bits (118), Expect(2) = 3e-07
Identities = 21/32 (65%), Positives = 27/32 (84%)
Frame = +2
Query: 47 FSSISSPITKLTHKANKFQWTDACERSFKS*K 142
FSSI+SP+TKLT K KFQW++ACE+SF+ K
Sbjct: 905 FSSIASPLTKLTQKTGKFQWSEACEKSFQELK 936
Score = 31.2 bits (69), Expect(2) = 3e-07
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +3
Query: 135 VKNRLTSTIMLAPPKRTNRYVVYCDASRVVL 227
+K RL + +L P+ T VVYCDASR+ L
Sbjct: 935 LKKRLITAPVLTLPEGTQGLVVYCDASRIGL 965
>gb|AAT39297.2| Gag-pol protein, putative [Solanum demissum]
Length = 1554
Score = 47.4 bits (111), Expect(2) = 6e-07
Identities = 20/32 (62%), Positives = 27/32 (84%)
Frame = +2
Query: 47 FSSISSPITKLTHKANKFQWTDACERSFKS*K 142
FSSI+SP+TKLT K KF+W++ACE+SF+ K
Sbjct: 990 FSSIASPLTKLTQKTVKFRWSEACEKSFQEFK 1021
Score = 32.7 bits (73), Expect(2) = 6e-07
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = +3
Query: 138 KNRLTSTIMLAPPKRTNRYVVYCDASRVVL 227
K RL + +L P+ T +VVYCDASRV L
Sbjct: 1021 KKRLITAPVLTLPEGTQGFVVYCDASRVGL 1050
>gb|ABI34354.1| Retrotransposon gag protein [Solanum demissum]
Length = 4543
Score = 45.4 bits (106), Expect(2) = 1e-06
Identities = 19/32 (59%), Positives = 26/32 (81%)
Frame = +2
Query: 47 FSSISSPITKLTHKANKFQWTDACERSFKS*K 142
FS+I+SP+TKLT K K QW++ACE+SF+ K
Sbjct: 687 FSTIASPLTKLTQKTVKLQWSEACEKSFQELK 718
Score = 45.4 bits (106), Expect(2) = 1e-06
Identities = 19/32 (59%), Positives = 26/32 (81%)
Frame = +2
Query: 47 FSSISSPITKLTHKANKFQWTDACERSFKS*K 142
FS+I+SP+TKLT K K QW++ACE+SF+ K
Sbjct: 2197 FSTIASPLTKLTQKTVKLQWSEACEKSFQELK 2228
Score = 45.4 bits (106), Expect(2) = 1e-06
Identities = 19/32 (59%), Positives = 26/32 (81%)
Frame = +2
Query: 47 FSSISSPITKLTHKANKFQWTDACERSFKS*K 142
FS+I+SP+TKLT K K QW++ACE+SF+ K
Sbjct: 3707 FSTIASPLTKLTQKTVKLQWSEACEKSFQELK 3738
Score = 33.5 bits (75), Expect(2) = 1e-06
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +3
Query: 135 VKNRLTSTIMLAPPKRTNRYVVYCDASRVVL 227
+K RLT+ +L P+ T +VV+CDASRV L
Sbjct: 717 LKKRLTTAPVLTLPEGTQGFVVHCDASRVGL 747
Score = 33.5 bits (75), Expect(2) = 1e-06
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +3
Query: 135 VKNRLTSTIMLAPPKRTNRYVVYCDASRVVL 227
+K RLT+ +L P+ T +VV+CDASRV L
Sbjct: 2227 LKKRLTTAPVLTLPEGTQGFVVHCDASRVGL 2257
Score = 33.5 bits (75), Expect(2) = 1e-06
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +3
Query: 135 VKNRLTSTIMLAPPKRTNRYVVYCDASRVVL 227
+K RLT+ +L P+ T +VV+CDASRV L
Sbjct: 3737 LKKRLTTAPVLTLPEGTQGFVVHCDASRVGL 3767
>ref|XP_004295405.1| PREDICTED: probable leucine-rich repeat receptor-like
serine/threonine-protein kinase At3g14840-like [Fragaria
vesca subsp. vesca]
Length = 1351
Score = 40.0 bits (92), Expect(2) = 1e-06
Identities = 19/32 (59%), Positives = 24/32 (75%)
Frame = +3
Query: 132 RVKNRLTSTIMLAPPKRTNRYVVYCDASRVVL 227
++KNRLTS +LA P + YVVYCDASR+ L
Sbjct: 1264 KLKNRLTSAPVLALPDDSGEYVVYCDASRLGL 1295
Score = 38.9 bits (89), Expect(2) = 1e-06
Identities = 15/29 (51%), Positives = 23/29 (79%)
Frame = +2
Query: 56 ISSPITKLTHKANKFQWTDACERSFKS*K 142
I++P+T+LT K KF+W+D CE+SF+ K
Sbjct: 1238 IAAPLTRLTKKGVKFEWSDECEQSFQKLK 1266
>ref|XP_004243106.1| PREDICTED: uncharacterized protein LOC101256304 [Solanum
lycopersicum]
Length = 647
Score = 47.8 bits (112), Expect(2) = 1e-06
Identities = 20/29 (68%), Positives = 25/29 (86%)
Frame = +2
Query: 47 FSSISSPITKLTHKANKFQWTDACERSFK 133
F+SIS+P+ +LT KA K QWTDACERSF+
Sbjct: 370 FASISAPLKRLTQKAAKLQWTDACERSFQ 398
Score = 31.2 bits (69), Expect(2) = 1e-06
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +3
Query: 135 VKNRLTSTIMLAPPKRTNRYVVYCDASRVVL 227
+K++LT+ +L P+ + YV+YCDAS V L
Sbjct: 400 LKDKLTTAPVLTLPEGPDGYVIYCDASGVGL 430
>gb|EOX94130.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 1401
Score = 45.8 bits (107), Expect(2) = 4e-06
Identities = 20/34 (58%), Positives = 25/34 (73%)
Frame = +2
Query: 41 KFFSSISSPITKLTHKANKFQWTDACERSFKS*K 142
K FS I +P+TKLT K KF+W+DACE SF+ K
Sbjct: 756 KDFSKIVAPLTKLTRKDTKFEWSDACENSFEKLK 789
Score = 31.2 bits (69), Expect(2) = 4e-06
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +3
Query: 132 RVKNRLTSTIMLAPPKRTNRYVVYCDASRVVL 227
++K LT+ +L+ P+ T Y V+CDASRV L
Sbjct: 787 KLKACLTTAPVLSLPQGTGGYTVFCDASRVGL 818
>ref|XP_006353601.1| PREDICTED: uncharacterized protein LOC102586067 [Solanum tuberosum]
Length = 881
Score = 44.3 bits (103), Expect(2) = 1e-05
Identities = 19/32 (59%), Positives = 25/32 (78%)
Frame = +2
Query: 47 FSSISSPITKLTHKANKFQWTDACERSFKS*K 142
FSS++SP+TKLT K KF W+D CE SF++ K
Sbjct: 766 FSSLASPMTKLTQKKAKFVWSDECEESFQTLK 797
Score = 31.6 bits (70), Expect(2) = 1e-05
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +3
Query: 135 VKNRLTSTIMLAPPKRTNRYVVYCDASRVVL 227
+K RL S +L+ P +VVYCDASR+ L
Sbjct: 796 LKERLVSAPILSLPDGIEGFVVYCDASRIGL 826