BLASTX nr result

ID: Atropa21_contig00032097 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00032097
         (757 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006344335.1| PREDICTED: ERAD-associated E3 ubiquitin-prot...    71   3e-10

>ref|XP_006344335.1| PREDICTED: ERAD-associated E3 ubiquitin-protein ligase HRD1-like
           [Solanum tuberosum]
          Length = 199

 Score = 71.2 bits (173), Expect = 3e-10
 Identities = 30/40 (75%), Positives = 36/40 (90%)
 Frame = -2

Query: 339 EMQSKPIPPFAPFRNWSYRKFSCEALRQW*TVPITGTSQT 220
           EMQSKPIPPFA F+NWSY +FSCEAL QW TVPITG++++
Sbjct: 8   EMQSKPIPPFASFKNWSYSEFSCEALEQWLTVPITGSAKS 47


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