BLASTX nr result
ID: Atropa21_contig00032091
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00032091
(484 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006352117.1| PREDICTED: chloroplastic group IIA intron sp... 122 4e-46
ref|XP_004247646.1| PREDICTED: chloroplastic group IIA intron sp... 120 7e-46
gb|EMJ28219.1| hypothetical protein PRUPE_ppa001134mg [Prunus pe... 75 4e-25
ref|XP_002315729.1| hypothetical protein POPTR_0010s08770g [Popu... 76 4e-24
gb|EOY05900.1| CRM family member 3A isoform 1 [Theobroma cacao] 70 1e-23
gb|EOY05902.1| CRM family member 3A isoform 3 [Theobroma cacao] 70 1e-23
gb|EOY05901.1| CRM family member 3A isoform 2 [Theobroma cacao] 70 1e-23
gb|EOY05903.1| CRM family member 3A isoform 4 [Theobroma cacao] 70 1e-23
gb|EXB29861.1| Chloroplastic group IIA intron splicing facilitat... 69 1e-22
ref|XP_002280226.1| PREDICTED: chloroplastic group IIA intron sp... 64 5e-22
emb|CAN79523.1| hypothetical protein VITISV_010525 [Vitis vinifera] 64 5e-22
ref|XP_002517017.1| conserved hypothetical protein [Ricinus comm... 66 7e-22
ref|XP_004495335.1| PREDICTED: chloroplastic group IIA intron sp... 76 9e-22
ref|XP_004291748.1| PREDICTED: chloroplastic group IIA intron sp... 63 6e-21
ref|XP_003556362.1| PREDICTED: chloroplastic group IIA intron sp... 68 9e-21
ref|XP_004134094.1| PREDICTED: chloroplastic group IIA intron sp... 79 1e-20
gb|EPS65975.1| hypothetical protein M569_08800, partial [Genlise... 62 2e-20
ref|NP_188947.2| CRM family member 3A [Arabidopsis thaliana] gi|... 72 3e-20
dbj|BAB02098.1| unnamed protein product [Arabidopsis thaliana] 72 3e-20
dbj|BAE98956.1| hypothetical protein [Arabidopsis thaliana] 72 3e-20
>ref|XP_006352117.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Solanum tuberosum]
Length = 883
Score = 122 bits (306), Expect(3) = 4e-46
Identities = 65/88 (73%), Positives = 71/88 (80%)
Frame = +2
Query: 2 GDTSSSDCEDNNTSGSIMDRIVEKLKKNRYADEFTDKDKMVKRDAEKGY*GYTFFVEEGI 181
GDTS SDCE++ SGS MDRIVEKLKK YADE T+K+K KR EKG FFVEEGI
Sbjct: 138 GDTSGSDCEES-ISGSTMDRIVEKLKKFGYADEATEKEKKEKRVVEKGSIEDIFFVEEGI 196
Query: 182 LPNVRGGFSQE*PFGDENVIAKDGVVKF 265
LPNVRGGFS+E PFGDENVIAKDGVV+F
Sbjct: 197 LPNVRGGFSEESPFGDENVIAKDGVVRF 224
Score = 65.5 bits (158), Expect(3) = 4e-46
Identities = 36/52 (69%), Positives = 38/52 (73%)
Frame = +1
Query: 268 WEKPLVXXXXXXXXXXXXXRTHLAELTLPASELRRLTNLALRIKNKTRIRGA 423
WE+PLV RTHLAELTLPASELRRLTNLALRIKNK+RI GA
Sbjct: 226 WERPLVKKEESNSMASRS-RTHLAELTLPASELRRLTNLALRIKNKSRITGA 276
Score = 43.5 bits (101), Expect(3) = 4e-46
Identities = 20/22 (90%), Positives = 20/22 (90%)
Frame = +3
Query: 417 GCGVTQQVVETIREKWNTSEVV 482
G GVTQQVVETIREKW TSEVV
Sbjct: 275 GAGVTQQVVETIREKWKTSEVV 296
>ref|XP_004247646.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Solanum lycopersicum]
Length = 883
Score = 120 bits (301), Expect(3) = 7e-46
Identities = 64/88 (72%), Positives = 70/88 (79%)
Frame = +2
Query: 2 GDTSSSDCEDNNTSGSIMDRIVEKLKKNRYADEFTDKDKMVKRDAEKGY*GYTFFVEEGI 181
GDTS SDCE++ SGS MDRIVEKLKK YADE T+K+K KR EKG FFVEEGI
Sbjct: 138 GDTSGSDCEES-ISGSTMDRIVEKLKKFGYADEATEKEKREKRVVEKGSIEDIFFVEEGI 196
Query: 182 LPNVRGGFSQE*PFGDENVIAKDGVVKF 265
LPNVRGGFS+E PFGDEN+IAKDGVV F
Sbjct: 197 LPNVRGGFSEETPFGDENIIAKDGVVGF 224
Score = 66.6 bits (161), Expect(3) = 7e-46
Identities = 37/52 (71%), Positives = 38/52 (73%)
Frame = +1
Query: 268 WEKPLVXXXXXXXXXXXXXRTHLAELTLPASELRRLTNLALRIKNKTRIRGA 423
WEKPLV RTHLAELTLPASELRRLTNLALRIKNK+RI GA
Sbjct: 226 WEKPLVKKEESNSMASRS-RTHLAELTLPASELRRLTNLALRIKNKSRITGA 276
Score = 43.5 bits (101), Expect(3) = 7e-46
Identities = 20/22 (90%), Positives = 20/22 (90%)
Frame = +3
Query: 417 GCGVTQQVVETIREKWNTSEVV 482
G GVTQQVVETIREKW TSEVV
Sbjct: 275 GAGVTQQVVETIREKWKTSEVV 296
>gb|EMJ28219.1| hypothetical protein PRUPE_ppa001134mg [Prunus persica]
Length = 899
Score = 75.1 bits (183), Expect(3) = 4e-25
Identities = 42/79 (53%), Positives = 56/79 (70%), Gaps = 2/79 (2%)
Frame = +2
Query: 35 NTSGSIMDRIVEKLKKNRYADEFTDKDKMVKRDA--EKGY*GYTFFVEEGILPNVRGGFS 208
N+SGS M++IVEKLKK Y D+ ++++K RD+ EKG F++EEG+LPN RGGFS
Sbjct: 135 NSSGSTMEKIVEKLKKFGYVDD-SNENKGEVRDSVIEKGSVEDIFYIEEGMLPNSRGGFS 193
Query: 209 QE*PFGDENVIAKDGVVKF 265
+E P G ENV DG V+F
Sbjct: 194 EESPLGIENVFGGDGKVRF 212
Score = 51.2 bits (121), Expect(3) = 4e-25
Identities = 28/51 (54%), Positives = 30/51 (58%)
Frame = +1
Query: 268 WEKPLVXXXXXXXXXXXXXRTHLAELTLPASELRRLTNLALRIKNKTRIRG 420
WEKP RT LAELTLP SELRRLTNL + K+KTRI G
Sbjct: 214 WEKPKEEEKQEEGSVRRKSRTSLAELTLPESELRRLTNLTFQKKHKTRIGG 264
Score = 34.3 bits (77), Expect(3) = 4e-25
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = +3
Query: 417 GCGVTQQVVETIREKWNTSEVV 482
G GVTQ VVE I E+W TSE+V
Sbjct: 264 GGGVTQAVVEMIHERWKTSEIV 285
>ref|XP_002315729.1| hypothetical protein POPTR_0010s08770g [Populus trichocarpa]
gi|222864769|gb|EEF01900.1| hypothetical protein
POPTR_0010s08770g [Populus trichocarpa]
Length = 894
Score = 76.3 bits (186), Expect(3) = 4e-24
Identities = 42/85 (49%), Positives = 58/85 (68%), Gaps = 2/85 (2%)
Frame = +2
Query: 17 SDCEDNNTSGSIMDRIVEKLKKNRYADEFTD--KDKMVKRDAEKGY*GYTFFVEEGILPN 190
S+ +++ SGS M++IVEKLKK+ Y D + K++M +R EKG F+VEEG+LPN
Sbjct: 99 SNNSNSSGSGSTMEKIVEKLKKHGYMDGDVNENKERMQERVIEKGSVEDIFYVEEGMLPN 158
Query: 191 VRGGFSQE*PFGDENVIAKDGVVKF 265
RGGFS+E P G E+V DG V+F
Sbjct: 159 ARGGFSKESPLGVEDVFRSDGEVRF 183
Score = 47.8 bits (112), Expect(3) = 4e-24
Identities = 26/51 (50%), Positives = 28/51 (54%)
Frame = +1
Query: 268 WEKPLVXXXXXXXXXXXXXRTHLAELTLPASELRRLTNLALRIKNKTRIRG 420
WEKP RT LAELTLP SELRRL NL K+KTR+ G
Sbjct: 185 WEKPKKEEDEGKWTARSKSRTSLAELTLPESELRRLRNLTYGTKSKTRVGG 235
Score = 33.1 bits (74), Expect(3) = 4e-24
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +3
Query: 417 GCGVTQQVVETIREKWNTSEV 479
G GVTQ+VV+ I +KW TSE+
Sbjct: 235 GRGVTQEVVDAIHDKWKTSEI 255
>gb|EOY05900.1| CRM family member 3A isoform 1 [Theobroma cacao]
Length = 876
Score = 70.1 bits (170), Expect(3) = 1e-23
Identities = 42/85 (49%), Positives = 54/85 (63%), Gaps = 6/85 (7%)
Frame = +2
Query: 29 DNN--TSGSIMDRIVEKLKKNRYADEFTDK----DKMVKRDAEKGY*GYTFFVEEGILPN 190
DNN +S S M++IVEKLKK Y E ++ ++ KR E+G F+VEEG+LPN
Sbjct: 124 DNNGRSSSSTMEKIVEKLKKFGYIGEENEQKEKGEEEPKRVIERGSIEDIFYVEEGMLPN 183
Query: 191 VRGGFSQE*PFGDENVIAKDGVVKF 265
RGGFS+E P G ENV DG V+F
Sbjct: 184 NRGGFSKESPLGMENVFGSDGEVRF 208
Score = 47.8 bits (112), Expect(3) = 1e-23
Identities = 26/52 (50%), Positives = 29/52 (55%)
Frame = +1
Query: 268 WEKPLVXXXXXXXXXXXXXRTHLAELTLPASELRRLTNLALRIKNKTRIRGA 423
WEK +T LAELTLP SELRRL NL R K+K RI+GA
Sbjct: 210 WEKRKEDEEEGGWTARRDSKTSLAELTLPESELRRLRNLTFRTKSKVRIKGA 261
Score = 37.4 bits (85), Expect(3) = 1e-23
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = +3
Query: 417 GCGVTQQVVETIREKWNTSEVV 482
G GVTQ+VV+TI EKW T E+V
Sbjct: 260 GAGVTQEVVDTIHEKWKTEEIV 281
>gb|EOY05902.1| CRM family member 3A isoform 3 [Theobroma cacao]
Length = 856
Score = 70.1 bits (170), Expect(3) = 1e-23
Identities = 42/85 (49%), Positives = 54/85 (63%), Gaps = 6/85 (7%)
Frame = +2
Query: 29 DNN--TSGSIMDRIVEKLKKNRYADEFTDK----DKMVKRDAEKGY*GYTFFVEEGILPN 190
DNN +S S M++IVEKLKK Y E ++ ++ KR E+G F+VEEG+LPN
Sbjct: 124 DNNGRSSSSTMEKIVEKLKKFGYIGEENEQKEKGEEEPKRVIERGSIEDIFYVEEGMLPN 183
Query: 191 VRGGFSQE*PFGDENVIAKDGVVKF 265
RGGFS+E P G ENV DG V+F
Sbjct: 184 NRGGFSKESPLGMENVFGSDGEVRF 208
Score = 47.8 bits (112), Expect(3) = 1e-23
Identities = 26/52 (50%), Positives = 29/52 (55%)
Frame = +1
Query: 268 WEKPLVXXXXXXXXXXXXXRTHLAELTLPASELRRLTNLALRIKNKTRIRGA 423
WEK +T LAELTLP SELRRL NL R K+K RI+GA
Sbjct: 210 WEKRKEDEEEGGWTARRDSKTSLAELTLPESELRRLRNLTFRTKSKVRIKGA 261
Score = 37.4 bits (85), Expect(3) = 1e-23
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = +3
Query: 417 GCGVTQQVVETIREKWNTSEVV 482
G GVTQ+VV+TI EKW T E+V
Sbjct: 260 GAGVTQEVVDTIHEKWKTEEIV 281
>gb|EOY05901.1| CRM family member 3A isoform 2 [Theobroma cacao]
Length = 685
Score = 70.1 bits (170), Expect(3) = 1e-23
Identities = 42/85 (49%), Positives = 54/85 (63%), Gaps = 6/85 (7%)
Frame = +2
Query: 29 DNN--TSGSIMDRIVEKLKKNRYADEFTDK----DKMVKRDAEKGY*GYTFFVEEGILPN 190
DNN +S S M++IVEKLKK Y E ++ ++ KR E+G F+VEEG+LPN
Sbjct: 124 DNNGRSSSSTMEKIVEKLKKFGYIGEENEQKEKGEEEPKRVIERGSIEDIFYVEEGMLPN 183
Query: 191 VRGGFSQE*PFGDENVIAKDGVVKF 265
RGGFS+E P G ENV DG V+F
Sbjct: 184 NRGGFSKESPLGMENVFGSDGEVRF 208
Score = 47.8 bits (112), Expect(3) = 1e-23
Identities = 26/52 (50%), Positives = 29/52 (55%)
Frame = +1
Query: 268 WEKPLVXXXXXXXXXXXXXRTHLAELTLPASELRRLTNLALRIKNKTRIRGA 423
WEK +T LAELTLP SELRRL NL R K+K RI+GA
Sbjct: 210 WEKRKEDEEEGGWTARRDSKTSLAELTLPESELRRLRNLTFRTKSKVRIKGA 261
Score = 37.4 bits (85), Expect(3) = 1e-23
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = +3
Query: 417 GCGVTQQVVETIREKWNTSEVV 482
G GVTQ+VV+TI EKW T E+V
Sbjct: 260 GAGVTQEVVDTIHEKWKTEEIV 281
>gb|EOY05903.1| CRM family member 3A isoform 4 [Theobroma cacao]
Length = 645
Score = 70.1 bits (170), Expect(3) = 1e-23
Identities = 42/85 (49%), Positives = 54/85 (63%), Gaps = 6/85 (7%)
Frame = +2
Query: 29 DNN--TSGSIMDRIVEKLKKNRYADEFTDK----DKMVKRDAEKGY*GYTFFVEEGILPN 190
DNN +S S M++IVEKLKK Y E ++ ++ KR E+G F+VEEG+LPN
Sbjct: 124 DNNGRSSSSTMEKIVEKLKKFGYIGEENEQKEKGEEEPKRVIERGSIEDIFYVEEGMLPN 183
Query: 191 VRGGFSQE*PFGDENVIAKDGVVKF 265
RGGFS+E P G ENV DG V+F
Sbjct: 184 NRGGFSKESPLGMENVFGSDGEVRF 208
Score = 47.8 bits (112), Expect(3) = 1e-23
Identities = 26/52 (50%), Positives = 29/52 (55%)
Frame = +1
Query: 268 WEKPLVXXXXXXXXXXXXXRTHLAELTLPASELRRLTNLALRIKNKTRIRGA 423
WEK +T LAELTLP SELRRL NL R K+K RI+GA
Sbjct: 210 WEKRKEDEEEGGWTARRDSKTSLAELTLPESELRRLRNLTFRTKSKVRIKGA 261
Score = 37.4 bits (85), Expect(3) = 1e-23
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = +3
Query: 417 GCGVTQQVVETIREKWNTSEVV 482
G GVTQ+VV+TI EKW T E+V
Sbjct: 260 GAGVTQEVVDTIHEKWKTEEIV 281
>gb|EXB29861.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Morus
notabilis]
Length = 878
Score = 69.3 bits (168), Expect(3) = 1e-22
Identities = 40/77 (51%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Frame = +2
Query: 29 DNNTSGSIMDRIVEKLKKNRYADEFTDKDKMVK--RDAEKGY*GYTFFVEEGILPNVRGG 202
DNN+ GS M+RIVEKLKK Y D+ + K K R EKG F+VEEG+LPN RGG
Sbjct: 128 DNNSGGSTMERIVEKLKKFGYMDDVGSEGKEDKGERVIEKGSVEDIFYVEEGMLPNPRGG 187
Query: 203 FSQE*PFGDENVIAKDG 253
FS + P G E V +G
Sbjct: 188 FSPDSPLGVEGVFGGNG 204
Score = 49.3 bits (116), Expect(3) = 1e-22
Identities = 27/52 (51%), Positives = 30/52 (57%)
Frame = +1
Query: 268 WEKPLVXXXXXXXXXXXXXRTHLAELTLPASELRRLTNLALRIKNKTRIRGA 423
WEKP +T LAELTLP SELRRL NL + K+KTRI GA
Sbjct: 211 WEKPKEKVEKEGGSMRRRSKTSLAELTLPESELRRLRNLTFQKKHKTRIGGA 262
Score = 33.1 bits (74), Expect(3) = 1e-22
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +3
Query: 417 GCGVTQQVVETIREKWNTSEVV 482
G GVTQ+VV+ I E+W T E+V
Sbjct: 261 GAGVTQEVVDMIHERWKTLEIV 282
>ref|XP_002280226.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic [Vitis vinifera]
gi|297737163|emb|CBI26364.3| unnamed protein product
[Vitis vinifera]
Length = 902
Score = 63.9 bits (154), Expect(3) = 5e-22
Identities = 37/84 (44%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Frame = +2
Query: 17 SDCEDNNTSGSIMDRIVEKLKKNRYADEFTD-KDKMVKRDAEKGY*GYTFFVEEGILPNV 193
S + + GS M++IVEKLKK Y D+ + K+ + +R EKG F++EEGILPN
Sbjct: 112 SRSDGGSGGGSTMEKIVEKLKKFGYMDDVKETKENVQERIIEKGSIEDIFYIEEGILPNP 171
Query: 194 RGGFSQE*PFGDENVIAKDGVVKF 265
+GGFS + P G EN +G V+F
Sbjct: 172 QGGFSLDSPLGVENKGDGNGEVRF 195
Score = 49.7 bits (117), Expect(3) = 5e-22
Identities = 28/51 (54%), Positives = 31/51 (60%)
Frame = +1
Query: 268 WEKPLVXXXXXXXXXXXXXRTHLAELTLPASELRRLTNLALRIKNKTRIRG 420
WE+P V RT LAELTLP SELRRL NL +R KNKT+I G
Sbjct: 197 WERPKVEEGSVRIKS----RTSLAELTLPESELRRLRNLTMRTKNKTKIGG 243
Score = 36.2 bits (82), Expect(3) = 5e-22
Identities = 16/22 (72%), Positives = 18/22 (81%)
Frame = +3
Query: 417 GCGVTQQVVETIREKWNTSEVV 482
G GVTQ VV+ IREKW TSE+V
Sbjct: 243 GGGVTQAVVDMIREKWKTSEIV 264
>emb|CAN79523.1| hypothetical protein VITISV_010525 [Vitis vinifera]
Length = 902
Score = 63.9 bits (154), Expect(3) = 5e-22
Identities = 37/84 (44%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Frame = +2
Query: 17 SDCEDNNTSGSIMDRIVEKLKKNRYADEFTD-KDKMVKRDAEKGY*GYTFFVEEGILPNV 193
S + + GS M++IVEKLKK Y D+ + K+ + +R EKG F++EEGILPN
Sbjct: 112 SRSDGGSGGGSTMEKIVEKLKKFGYMDDVKETKENVQERIIEKGSIEDIFYIEEGILPNP 171
Query: 194 RGGFSQE*PFGDENVIAKDGVVKF 265
+GGFS + P G EN +G V+F
Sbjct: 172 QGGFSLDSPLGVENKGDGNGEVRF 195
Score = 49.7 bits (117), Expect(3) = 5e-22
Identities = 28/51 (54%), Positives = 31/51 (60%)
Frame = +1
Query: 268 WEKPLVXXXXXXXXXXXXXRTHLAELTLPASELRRLTNLALRIKNKTRIRG 420
WE+P V RT LAELTLP SELRRL NL +R KNKT+I G
Sbjct: 197 WERPKVEEGSVRIKS----RTSLAELTLPESELRRLRNLTMRTKNKTKIGG 243
Score = 36.2 bits (82), Expect(3) = 5e-22
Identities = 16/22 (72%), Positives = 18/22 (81%)
Frame = +3
Query: 417 GCGVTQQVVETIREKWNTSEVV 482
G GVTQ VV+ IREKW TSE+V
Sbjct: 243 GGGVTQAVVDMIREKWKTSEIV 264
>ref|XP_002517017.1| conserved hypothetical protein [Ricinus communis]
gi|223543652|gb|EEF45180.1| conserved hypothetical
protein [Ricinus communis]
Length = 773
Score = 66.2 bits (160), Expect(3) = 7e-22
Identities = 37/74 (50%), Positives = 49/74 (66%), Gaps = 3/74 (4%)
Frame = +2
Query: 53 MDRIVEKLKKNRYADEFTD---KDKMVKRDAEKGY*GYTFFVEEGILPNVRGGFSQE*PF 223
M++IVEKLKK+ Y D D K+K ++R +KG F+VEEG LPN RGGFS+E P
Sbjct: 1 MEKIVEKLKKHGYIDGNVDEKKKEKTLERVIQKGSVEDIFYVEEGNLPNSRGGFSKESPL 60
Query: 224 GDENVIAKDGVVKF 265
G E+V +G V+F
Sbjct: 61 GVEDVFKSNGEVRF 74
Score = 48.1 bits (113), Expect(3) = 7e-22
Identities = 23/33 (69%), Positives = 27/33 (81%)
Frame = +1
Query: 325 RTHLAELTLPASELRRLTNLALRIKNKTRIRGA 423
RT LAELTLP SELRRL NL +IK+K R++GA
Sbjct: 97 RTQLAELTLPESELRRLRNLTYQIKSKVRVKGA 129
Score = 35.0 bits (79), Expect(3) = 7e-22
Identities = 13/22 (59%), Positives = 19/22 (86%)
Frame = +3
Query: 417 GCGVTQQVVETIREKWNTSEVV 482
G GVTQ+VV++I ++W TSE+V
Sbjct: 128 GAGVTQEVVDSIHDRWKTSEIV 149
>ref|XP_004495335.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Cicer arietinum]
Length = 838
Score = 76.3 bits (186), Expect(3) = 9e-22
Identities = 48/88 (54%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Frame = +2
Query: 11 SSSDCEDNNTSGSIMDRIVEKLKKNRYADEFTDKDK---MVKRDAEKGY*GYTFFVEEGI 181
SSSD EDNN GS MDRIVEKLKK Y D+ D+ K +R EKG F+VEEGI
Sbjct: 98 SSSDDEDNN-GGSTMDRIVEKLKKFGYDDDDDDEKKDHNTKERVIEKGSVEDIFYVEEGI 156
Query: 182 LPNVRGGFSQE*PFGDENVIAKDGVVKF 265
LPN +GGFS E PFG + G V+F
Sbjct: 157 LPNTKGGFSSESPFGVGRFGSDGGEVRF 184
Score = 39.7 bits (91), Expect(3) = 9e-22
Identities = 20/32 (62%), Positives = 23/32 (71%)
Frame = +1
Query: 325 RTHLAELTLPASELRRLTNLALRIKNKTRIRG 420
+T LAELTLP SEL+RL L K+KTRI G
Sbjct: 208 KTSLAELTLPESELKRLLKLTFEKKHKTRIGG 239
Score = 33.1 bits (74), Expect(3) = 9e-22
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +3
Query: 417 GCGVTQQVVETIREKWNTSEVV 482
G GVTQ VV+ I E+W TSE+V
Sbjct: 239 GGGVTQAVVDKIHERWKTSEIV 260
>ref|XP_004291748.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 852
Score = 62.8 bits (151), Expect(3) = 6e-21
Identities = 37/77 (48%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Frame = +2
Query: 29 DNNTSGSIMDRIVEKLKKNRYA--DEFTDKDKMVKRDAEKGY*GYTFFVEEGILPNVRGG 202
D N GS MD+IVEKLKK Y D+ + ++ +R EKG F+VEEG+LPN RGG
Sbjct: 114 DGNDGGSTMDKIVEKLKKFGYIAEDKNEGRGEVRERVIEKGSVEDIFYVEEGMLPNSRGG 173
Query: 203 FSQE*PFGDENVIAKDG 253
FS P G E+V G
Sbjct: 174 FSGVSPLGTEDVFGDGG 190
Score = 49.3 bits (116), Expect(3) = 6e-21
Identities = 27/52 (51%), Positives = 30/52 (57%)
Frame = +1
Query: 268 WEKPLVXXXXXXXXXXXXXRTHLAELTLPASELRRLTNLALRIKNKTRIRGA 423
WEKP RT LAELTLP SELRRL NL + K+KT+I GA
Sbjct: 197 WEKPREREKEEGGSIRRRSRTSLAELTLPESELRRLRNLTFQKKHKTKIGGA 248
Score = 34.3 bits (77), Expect(3) = 6e-21
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +3
Query: 417 GCGVTQQVVETIREKWNTSEVV 482
G GVTQ VVE I E+W T+E+V
Sbjct: 247 GAGVTQAVVEMIHERWKTAEIV 268
>ref|XP_003556362.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Glycine max]
Length = 835
Score = 67.8 bits (164), Expect(3) = 9e-21
Identities = 43/88 (48%), Positives = 56/88 (63%), Gaps = 3/88 (3%)
Frame = +2
Query: 11 SSSDCE--DNNTSGSIMDRIVEKLKKNRYADE-FTDKDKMVKRDAEKGY*GYTFFVEEGI 181
+SSD E D NT GS MDRIVEKLKK Y ++ +K++++ EKG F+VEEG+
Sbjct: 99 ASSDEEGGDGNTGGSTMDRIVEKLKKFGYVEDGIQNKERVI----EKGSVEDIFYVEEGM 154
Query: 182 LPNVRGGFSQE*PFGDENVIAKDGVVKF 265
LPN RGGFS E P G + + D V+F
Sbjct: 155 LPNSRGGFSSESPLGFGSFGSDDREVRF 182
Score = 45.8 bits (107), Expect(3) = 9e-21
Identities = 24/49 (48%), Positives = 28/49 (57%)
Frame = +1
Query: 268 WEKPLVXXXXXXXXXXXXXRTHLAELTLPASELRRLTNLALRIKNKTRI 414
WEKP+V +T LAELTLP SEL+RL L K+KTRI
Sbjct: 184 WEKPVVEELEERKSMRSRSKTSLAELTLPESELKRLLKLTFEKKHKTRI 232
Score = 32.0 bits (71), Expect(3) = 9e-21
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +3
Query: 423 GVTQQVVETIREKWNTSEVV 482
GVTQ VV+ I E+W TSE+V
Sbjct: 236 GVTQAVVDKIHERWKTSEIV 255
>ref|XP_004134094.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Cucumis sativus]
gi|449504099|ref|XP_004162252.1| PREDICTED:
chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Cucumis sativus]
Length = 874
Score = 78.6 bits (192), Expect(3) = 1e-20
Identities = 41/85 (48%), Positives = 56/85 (65%)
Frame = +2
Query: 11 SSSDCEDNNTSGSIMDRIVEKLKKNRYADEFTDKDKMVKRDAEKGY*GYTFFVEEGILPN 190
+SS +D+ GS M++IV KLKK Y D+ +K+K +R EKG ++EEG+LPN
Sbjct: 126 ASSRIDDDGRGGSTMEKIVRKLKKFGYIDD-ENKEKGEERAIEKGSVEDILYIEEGMLPN 184
Query: 191 VRGGFSQE*PFGDENVIAKDGVVKF 265
RGGFS+E P GDEN+ DG V+F
Sbjct: 185 TRGGFSKESPMGDENMFGSDGEVRF 209
Score = 33.5 bits (75), Expect(3) = 1e-20
Identities = 16/29 (55%), Positives = 21/29 (72%)
Frame = +1
Query: 334 LAELTLPASELRRLTNLALRIKNKTRIRG 420
LA+LTLP ELRRL NL + ++K +I G
Sbjct: 232 LAQLTLPEPELRRLRNLTFQKRHKMKIGG 260
Score = 33.1 bits (74), Expect(3) = 1e-20
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +3
Query: 417 GCGVTQQVVETIREKWNTSEVV 482
G GVTQ VV+ I EKW +SE+V
Sbjct: 260 GGGVTQAVVDVIHEKWKSSEIV 281
>gb|EPS65975.1| hypothetical protein M569_08800, partial [Genlisea aurea]
Length = 761
Score = 61.6 bits (148), Expect(3) = 2e-20
Identities = 40/85 (47%), Positives = 49/85 (57%), Gaps = 5/85 (5%)
Frame = +2
Query: 17 SDCEDN---NTSGSIMDRIVEKLKKNRYADE--FTDKDKMVKRDAEKGY*GYTFFVEEGI 181
SD E+ +T S M RIV KLKK Y D+ D+++ ++ EKG F VEEG+
Sbjct: 110 SDAEEGTSTSTGVSTMQRIVAKLKKFGYLDDDAAADENEAGRQIVEKGSVEDIFSVEEGL 169
Query: 182 LPNVRGGFSQE*PFGDENVIAKDGV 256
LPN RGG S E PFGDE V K V
Sbjct: 170 LPNSRGGISHEFPFGDEIVAVKGDV 194
Score = 45.8 bits (107), Expect(3) = 2e-20
Identities = 23/30 (76%), Positives = 25/30 (83%)
Frame = +1
Query: 334 LAELTLPASELRRLTNLALRIKNKTRIRGA 423
LAE TLP SE+ RL NLALR KNKTRI+GA
Sbjct: 221 LAESTLPESEVTRLRNLALRTKNKTRIKGA 250
Score = 37.0 bits (84), Expect(3) = 2e-20
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = +3
Query: 417 GCGVTQQVVETIREKWNTSEVV 482
G GVTQ++VE I EKW T+EVV
Sbjct: 249 GAGVTQEIVEAIHEKWKTAEVV 270
>ref|NP_188947.2| CRM family member 3A [Arabidopsis thaliana]
gi|332643191|gb|AEE76712.1| CRM family member 3A
[Arabidopsis thaliana]
Length = 881
Score = 71.6 bits (174), Expect(3) = 3e-20
Identities = 40/85 (47%), Positives = 51/85 (60%)
Frame = +2
Query: 11 SSSDCEDNNTSGSIMDRIVEKLKKNRYADEFTDKDKMVKRDAEKGY*GYTFFVEEGILPN 190
S D + GS M++IVEKLKK Y +E +K+ +R EKG F+VEEG LPN
Sbjct: 105 SGDDNRSRDGDGSTMEKIVEKLKKYGYMEEVQNKEIEQERRIEKGSVEDIFYVEEGKLPN 164
Query: 191 VRGGFSQE*PFGDENVIAKDGVVKF 265
RGGF++E G ENVI +G V F
Sbjct: 165 TRGGFTEESLLGGENVIGSNGDVGF 189
Score = 41.6 bits (96), Expect(3) = 3e-20
Identities = 21/32 (65%), Positives = 23/32 (71%)
Frame = +1
Query: 325 RTHLAELTLPASELRRLTNLALRIKNKTRIRG 420
R LAE+TLP SELRRL NL R +K RIRG
Sbjct: 213 RYSLAEMTLPESELRRLRNLTFRTASKMRIRG 244
Score = 30.8 bits (68), Expect(3) = 3e-20
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +3
Query: 417 GCGVTQQVVETIREKWNTSEVV 482
G GVTQ V+ I+EKW ++E+V
Sbjct: 244 GGGVTQVAVDAIKEKWKSAEIV 265
>dbj|BAB02098.1| unnamed protein product [Arabidopsis thaliana]
Length = 850
Score = 71.6 bits (174), Expect(3) = 3e-20
Identities = 40/85 (47%), Positives = 51/85 (60%)
Frame = +2
Query: 11 SSSDCEDNNTSGSIMDRIVEKLKKNRYADEFTDKDKMVKRDAEKGY*GYTFFVEEGILPN 190
S D + GS M++IVEKLKK Y +E +K+ +R EKG F+VEEG LPN
Sbjct: 74 SGDDNRSRDGDGSTMEKIVEKLKKYGYMEEVQNKEIEQERRIEKGSVEDIFYVEEGKLPN 133
Query: 191 VRGGFSQE*PFGDENVIAKDGVVKF 265
RGGF++E G ENVI +G V F
Sbjct: 134 TRGGFTEESLLGGENVIGSNGDVGF 158
Score = 41.6 bits (96), Expect(3) = 3e-20
Identities = 21/32 (65%), Positives = 23/32 (71%)
Frame = +1
Query: 325 RTHLAELTLPASELRRLTNLALRIKNKTRIRG 420
R LAE+TLP SELRRL NL R +K RIRG
Sbjct: 182 RYSLAEMTLPESELRRLRNLTFRTASKMRIRG 213
Score = 30.8 bits (68), Expect(3) = 3e-20
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +3
Query: 417 GCGVTQQVVETIREKWNTSEVV 482
G GVTQ V+ I+EKW ++E+V
Sbjct: 213 GGGVTQVAVDAIKEKWKSAEIV 234
>dbj|BAE98956.1| hypothetical protein [Arabidopsis thaliana]
Length = 717
Score = 71.6 bits (174), Expect(3) = 3e-20
Identities = 40/85 (47%), Positives = 51/85 (60%)
Frame = +2
Query: 11 SSSDCEDNNTSGSIMDRIVEKLKKNRYADEFTDKDKMVKRDAEKGY*GYTFFVEEGILPN 190
S D + GS M++IVEKLKK Y +E +K+ +R EKG F+VEEG LPN
Sbjct: 105 SGDDNRSRDGDGSTMEKIVEKLKKYGYMEEVQNKEIEQERRIEKGSVEDIFYVEEGKLPN 164
Query: 191 VRGGFSQE*PFGDENVIAKDGVVKF 265
RGGF++E G ENVI +G V F
Sbjct: 165 TRGGFTEESLLGGENVIGSNGDVGF 189
Score = 41.6 bits (96), Expect(3) = 3e-20
Identities = 21/32 (65%), Positives = 23/32 (71%)
Frame = +1
Query: 325 RTHLAELTLPASELRRLTNLALRIKNKTRIRG 420
R LAE+TLP SELRRL NL R +K RIRG
Sbjct: 213 RYSLAEMTLPESELRRLRNLTFRTASKMRIRG 244
Score = 30.8 bits (68), Expect(3) = 3e-20
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +3
Query: 417 GCGVTQQVVETIREKWNTSEVV 482
G GVTQ V+ I+EKW ++E+V
Sbjct: 244 GGGVTQVAVDAIKEKWKSAEIV 265