BLASTX nr result

ID: Atropa21_contig00031905 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00031905
         (1081 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509827.1| conserved hypothetical protein [Ricinus comm...    59   4e-09

>ref|XP_002509827.1| conserved hypothetical protein [Ricinus communis]
           gi|223549726|gb|EEF51214.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 208

 Score = 58.5 bits (140), Expect(2) = 4e-09
 Identities = 22/53 (41%), Positives = 40/53 (75%)
 Frame = +1

Query: 796 VPKIKFAFPEIDTNNPRGWIKRCERFFELYQVTSKQKIDIEAVHIKDQNDPWF 954
           +PK++ +    + NNPR WIK+CE++F+LY + ++QKIDI ++++ D+ D W+
Sbjct: 108 IPKVELS--HFEGNNPRLWIKKCEKYFQLYSIPNEQKIDIASLYLGDRADIWY 158



 Score = 30.0 bits (66), Expect(2) = 4e-09
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = +3

Query: 999  FCSDVCRRYENICPVDVVIEFNRLQQR 1079
            F  ++CRR+  +   DVV EFN+L+Q+
Sbjct: 173  FSEELCRRFGELTIEDVVEEFNKLKQK 199


Top