BLASTX nr result

ID: Atropa21_contig00031885 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00031885
         (517 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006361697.1| PREDICTED: transcription elongation factor S...   151   1e-34
ref|XP_006361696.1| PREDICTED: transcription elongation factor S...   151   1e-34
ref|XP_006361695.1| PREDICTED: transcription elongation factor S...   151   1e-34
ref|XP_006361694.1| PREDICTED: transcription elongation factor S...   151   1e-34
ref|XP_004250498.1| PREDICTED: uncharacterized protein LOC101254...   145   4e-33
emb|CBI31409.3| unnamed protein product [Vitis vinifera]               63   4e-08

>ref|XP_006361697.1| PREDICTED: transcription elongation factor SPT5-like isoform X4
           [Solanum tuberosum]
          Length = 1462

 Score =  151 bits (381), Expect = 1e-34
 Identities = 88/157 (56%), Positives = 101/157 (64%), Gaps = 1/157 (0%)
 Frame = +1

Query: 49  MGRKSVLQKGKEKLTDGN-TSSAGKRKRNSNDGYDDDKTGGGRKRKDRNVLQXXXXXXXX 225
           MGRKSVLQKGKEK+TDG  +SSAGKRKRNS+D +DDDKTGG RKRKDR+VLQ        
Sbjct: 1   MGRKSVLQKGKEKVTDGKASSSAGKRKRNSSDDFDDDKTGG-RKRKDRSVLQFVDDVAYE 59

Query: 226 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNNVKIKNEPVRTPQLPVVKXXXXXXXXXXQ 405
                                        G+NV+IKNEPVRTPQ PV+K          +
Sbjct: 60  VDDDDDDDSDFDFSDSDFFDEDLLEEEF-GSNVEIKNEPVRTPQPPVIKEEEMDGEELER 118

Query: 406 MLRERYRPGSSFVTCAEDNDERKRLFEQDTIVPTLKD 516
           MLRERY+PGSSFVT AED DERKR  EQ+T+VP+LKD
Sbjct: 119 MLRERYKPGSSFVTYAEDTDERKRQSEQETLVPSLKD 155


>ref|XP_006361696.1| PREDICTED: transcription elongation factor SPT5-like isoform X3
           [Solanum tuberosum]
          Length = 1614

 Score =  151 bits (381), Expect = 1e-34
 Identities = 88/157 (56%), Positives = 101/157 (64%), Gaps = 1/157 (0%)
 Frame = +1

Query: 49  MGRKSVLQKGKEKLTDGN-TSSAGKRKRNSNDGYDDDKTGGGRKRKDRNVLQXXXXXXXX 225
           MGRKSVLQKGKEK+TDG  +SSAGKRKRNS+D +DDDKTGG RKRKDR+VLQ        
Sbjct: 1   MGRKSVLQKGKEKVTDGKASSSAGKRKRNSSDDFDDDKTGG-RKRKDRSVLQFVDDVAYE 59

Query: 226 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNNVKIKNEPVRTPQLPVVKXXXXXXXXXXQ 405
                                        G+NV+IKNEPVRTPQ PV+K          +
Sbjct: 60  VDDDDDDDSDFDFSDSDFFDEDLLEEEF-GSNVEIKNEPVRTPQPPVIKEEEMDGEELER 118

Query: 406 MLRERYRPGSSFVTCAEDNDERKRLFEQDTIVPTLKD 516
           MLRERY+PGSSFVT AED DERKR  EQ+T+VP+LKD
Sbjct: 119 MLRERYKPGSSFVTYAEDTDERKRQSEQETLVPSLKD 155


>ref|XP_006361695.1| PREDICTED: transcription elongation factor SPT5-like isoform X2
           [Solanum tuberosum]
          Length = 1626

 Score =  151 bits (381), Expect = 1e-34
 Identities = 88/157 (56%), Positives = 101/157 (64%), Gaps = 1/157 (0%)
 Frame = +1

Query: 49  MGRKSVLQKGKEKLTDGN-TSSAGKRKRNSNDGYDDDKTGGGRKRKDRNVLQXXXXXXXX 225
           MGRKSVLQKGKEK+TDG  +SSAGKRKRNS+D +DDDKTGG RKRKDR+VLQ        
Sbjct: 1   MGRKSVLQKGKEKVTDGKASSSAGKRKRNSSDDFDDDKTGG-RKRKDRSVLQFVDDVAYE 59

Query: 226 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNNVKIKNEPVRTPQLPVVKXXXXXXXXXXQ 405
                                        G+NV+IKNEPVRTPQ PV+K          +
Sbjct: 60  VDDDDDDDSDFDFSDSDFFDEDLLEEEF-GSNVEIKNEPVRTPQPPVIKEEEMDGEELER 118

Query: 406 MLRERYRPGSSFVTCAEDNDERKRLFEQDTIVPTLKD 516
           MLRERY+PGSSFVT AED DERKR  EQ+T+VP+LKD
Sbjct: 119 MLRERYKPGSSFVTYAEDTDERKRQSEQETLVPSLKD 155


>ref|XP_006361694.1| PREDICTED: transcription elongation factor SPT5-like isoform X1
           [Solanum tuberosum]
          Length = 1669

 Score =  151 bits (381), Expect = 1e-34
 Identities = 88/157 (56%), Positives = 101/157 (64%), Gaps = 1/157 (0%)
 Frame = +1

Query: 49  MGRKSVLQKGKEKLTDGN-TSSAGKRKRNSNDGYDDDKTGGGRKRKDRNVLQXXXXXXXX 225
           MGRKSVLQKGKEK+TDG  +SSAGKRKRNS+D +DDDKTGG RKRKDR+VLQ        
Sbjct: 1   MGRKSVLQKGKEKVTDGKASSSAGKRKRNSSDDFDDDKTGG-RKRKDRSVLQFVDDVAYE 59

Query: 226 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNNVKIKNEPVRTPQLPVVKXXXXXXXXXXQ 405
                                        G+NV+IKNEPVRTPQ PV+K          +
Sbjct: 60  VDDDDDDDSDFDFSDSDFFDEDLLEEEF-GSNVEIKNEPVRTPQPPVIKEEEMDGEELER 118

Query: 406 MLRERYRPGSSFVTCAEDNDERKRLFEQDTIVPTLKD 516
           MLRERY+PGSSFVT AED DERKR  EQ+T+VP+LKD
Sbjct: 119 MLRERYKPGSSFVTYAEDTDERKRQSEQETLVPSLKD 155


>ref|XP_004250498.1| PREDICTED: uncharacterized protein LOC101254655 [Solanum
           lycopersicum]
          Length = 1609

 Score =  145 bits (367), Expect = 4e-33
 Identities = 85/157 (54%), Positives = 99/157 (63%), Gaps = 1/157 (0%)
 Frame = +1

Query: 49  MGRKSVLQKGKEKLTDGN-TSSAGKRKRNSNDGYDDDKTGGGRKRKDRNVLQXXXXXXXX 225
           MGRKSVLQKGKEK+TDG  +SSAGKRKRNS+D ++DDKTGG RKRKDR+VLQ        
Sbjct: 1   MGRKSVLQKGKEKVTDGKASSSAGKRKRNSSDDFNDDKTGG-RKRKDRSVLQFVDDVAYE 59

Query: 226 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNNVKIKNEPVRTPQLPVVKXXXXXXXXXXQ 405
                                        G+N +IKNEP RTPQ PV+K          +
Sbjct: 60  VDDDDDDDSDFDFSDSDFFEQEEF-----GSNAEIKNEPARTPQPPVIKEEEMDGEELER 114

Query: 406 MLRERYRPGSSFVTCAEDNDERKRLFEQDTIVPTLKD 516
           MLRERY+PGSSFVT AED D+RKR  EQDT+VP+LKD
Sbjct: 115 MLRERYKPGSSFVTYAEDADDRKRQSEQDTLVPSLKD 151


>emb|CBI31409.3| unnamed protein product [Vitis vinifera]
          Length = 675

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 49/149 (32%), Positives = 65/149 (43%), Gaps = 1/149 (0%)
 Frame = +1

Query: 73  KGKEKLTDGNTSSAGKRKRNSNDGYDDDKTGGGRKRKDRNVLQXXXXXXXXXXXXXXXXX 252
           KGKE    G   S+GKRKR      DDD   G RKRK+  VLQ                 
Sbjct: 4   KGKEIAGKG---SSGKRKR------DDDDKSGSRKRKNSAVLQFFEDAAEVDNDSSDDSI 54

Query: 253 XXXXXXXXXXXXXXXXXXXXGNNVKIKNEPVRTPQLPVV-KXXXXXXXXXXQMLRERYRP 429
                                  +K+KNEP +   LP   K          +ML ERY+ 
Sbjct: 55  SGDDFLEDGF----------NTGLKVKNEPGKAHNLPFFPKEEELSEEELEKMLEERYKD 104

Query: 430 GSSFVTCAEDNDERKRLFEQDTIVPTLKD 516
           GS FVT AED+ E KR  ++++++P++KD
Sbjct: 105 GSKFVTYAEDDYETKRSVQRNSLIPSIKD 133


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