BLASTX nr result
ID: Atropa21_contig00031838
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00031838
(570 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006340094.1| PREDICTED: mediator of RNA polymerase II tra... 160 2e-37
ref|XP_006340093.1| PREDICTED: mediator of RNA polymerase II tra... 160 2e-37
ref|XP_004237346.1| PREDICTED: mediator of RNA polymerase II tra... 158 8e-37
ref|XP_002283658.2| PREDICTED: uncharacterized protein LOC100263... 146 4e-33
emb|CAN78879.1| hypothetical protein VITISV_024990 [Vitis vinifera] 146 4e-33
ref|XP_002523429.1| conserved hypothetical protein [Ricinus comm... 142 5e-32
gb|EXC34516.1| Mediator of RNA polymerase II transcription subun... 136 3e-30
ref|XP_006601869.1| PREDICTED: mediator of RNA polymerase II tra... 135 6e-30
ref|XP_006601868.1| PREDICTED: mediator of RNA polymerase II tra... 135 6e-30
ref|XP_006591430.1| PREDICTED: mediator of RNA polymerase II tra... 135 6e-30
ref|XP_006591429.1| PREDICTED: mediator of RNA polymerase II tra... 135 6e-30
ref|XP_006591428.1| PREDICTED: mediator of RNA polymerase II tra... 135 6e-30
ref|XP_004502201.1| PREDICTED: mediator of RNA polymerase II tra... 135 6e-30
ref|XP_004502200.1| PREDICTED: mediator of RNA polymerase II tra... 135 6e-30
gb|EOY08938.1| RNA polymerase II transcription mediators isoform... 133 3e-29
gb|EOY08936.1| RNA polymerase II transcription mediators isoform... 133 3e-29
gb|EMJ06146.1| hypothetical protein PRUPE_ppa000082mg [Prunus pe... 133 3e-29
gb|ESW35840.1| hypothetical protein PHAVU_001G269300g [Phaseolus... 133 4e-29
gb|AGZ80689.1| hypothetical protein, partial [Phaseolus vulgaris... 133 4e-29
ref|XP_004296201.1| PREDICTED: mediator of RNA polymerase II tra... 131 1e-28
>ref|XP_006340094.1| PREDICTED: mediator of RNA polymerase II transcription subunit
13-like isoform X2 [Solanum tuberosum]
Length = 1962
Score = 160 bits (406), Expect = 2e-37
Identities = 84/99 (84%), Positives = 85/99 (85%)
Frame = -3
Query: 568 SLVDYYGGSNIIQEKFLXXXXXXXXXXXGSETRDVEIATHLILENIAAELHALSWMTVSP 389
SLVDYYGGSNIIQEKFL GSETRDVEIATHLILENIAAELHALSW+TVSP
Sbjct: 1864 SLVDYYGGSNIIQEKFLKGVGKVGGRGTGSETRDVEIATHLILENIAAELHALSWLTVSP 1923
Query: 388 AYLERRSALPFHCDTVLRLRRLLHFADKEVSRQPEKSQV 272
AYLERRSALPFHCD VLRLRRLLHFADKEVSRQP SQV
Sbjct: 1924 AYLERRSALPFHCDMVLRLRRLLHFADKEVSRQPVISQV 1962
>ref|XP_006340093.1| PREDICTED: mediator of RNA polymerase II transcription subunit
13-like isoform X1 [Solanum tuberosum]
Length = 1989
Score = 160 bits (406), Expect = 2e-37
Identities = 84/99 (84%), Positives = 85/99 (85%)
Frame = -3
Query: 568 SLVDYYGGSNIIQEKFLXXXXXXXXXXXGSETRDVEIATHLILENIAAELHALSWMTVSP 389
SLVDYYGGSNIIQEKFL GSETRDVEIATHLILENIAAELHALSW+TVSP
Sbjct: 1891 SLVDYYGGSNIIQEKFLKGVGKVGGRGTGSETRDVEIATHLILENIAAELHALSWLTVSP 1950
Query: 388 AYLERRSALPFHCDTVLRLRRLLHFADKEVSRQPEKSQV 272
AYLERRSALPFHCD VLRLRRLLHFADKEVSRQP SQV
Sbjct: 1951 AYLERRSALPFHCDMVLRLRRLLHFADKEVSRQPVISQV 1989
>ref|XP_004237346.1| PREDICTED: mediator of RNA polymerase II transcription subunit
13-like [Solanum lycopersicum]
Length = 1987
Score = 158 bits (400), Expect = 8e-37
Identities = 82/99 (82%), Positives = 83/99 (83%)
Frame = -3
Query: 568 SLVDYYGGSNIIQEKFLXXXXXXXXXXXGSETRDVEIATHLILENIAAELHALSWMTVSP 389
SLVDYYGGSN+I EKFL GSETRDVEIA HLILENIAAELHALSWMTVSP
Sbjct: 1889 SLVDYYGGSNVIHEKFLKGVGKVGGRGTGSETRDVEIAAHLILENIAAELHALSWMTVSP 1948
Query: 388 AYLERRSALPFHCDTVLRLRRLLHFADKEVSRQPEKSQV 272
AYLERRSALP HCD VLRLRRLLHFADKEVSRQP KSQV
Sbjct: 1949 AYLERRSALPLHCDMVLRLRRLLHFADKEVSRQPVKSQV 1987
>ref|XP_002283658.2| PREDICTED: uncharacterized protein LOC100263945 [Vitis vinifera]
Length = 1932
Score = 146 bits (368), Expect = 4e-33
Identities = 72/99 (72%), Positives = 79/99 (79%)
Frame = -3
Query: 568 SLVDYYGGSNIIQEKFLXXXXXXXXXXXGSETRDVEIATHLILENIAAELHALSWMTVSP 389
SL+DYYGG+NI Q+K + SE RD EI THLILE +AAELHALSWMTVSP
Sbjct: 1834 SLIDYYGGNNITQDKVVRGLTKQGGRSISSEARDFEIETHLILETVAAELHALSWMTVSP 1893
Query: 388 AYLERRSALPFHCDTVLRLRRLLHFADKEVSRQPEKSQV 272
AYLERR+ALPFHCD VLRLRRLLHFADKE+SR PEKSQV
Sbjct: 1894 AYLERRTALPFHCDMVLRLRRLLHFADKELSRTPEKSQV 1932
>emb|CAN78879.1| hypothetical protein VITISV_024990 [Vitis vinifera]
Length = 893
Score = 146 bits (368), Expect = 4e-33
Identities = 72/99 (72%), Positives = 79/99 (79%)
Frame = -3
Query: 568 SLVDYYGGSNIIQEKFLXXXXXXXXXXXGSETRDVEIATHLILENIAAELHALSWMTVSP 389
SL+DYYGG+NI Q+K + SE RD EI THLILE +AAELHALSWMTVSP
Sbjct: 795 SLIDYYGGNNITQDKVVRGLTKQGGRSISSEARDFEIETHLILETVAAELHALSWMTVSP 854
Query: 388 AYLERRSALPFHCDTVLRLRRLLHFADKEVSRQPEKSQV 272
AYLERR+ALPFHCD VLRLRRLLHFADKE+SR PEKSQV
Sbjct: 855 AYLERRTALPFHCDMVLRLRRLLHFADKELSRTPEKSQV 893
>ref|XP_002523429.1| conserved hypothetical protein [Ricinus communis]
gi|223537379|gb|EEF39008.1| conserved hypothetical
protein [Ricinus communis]
Length = 794
Score = 142 bits (359), Expect = 5e-32
Identities = 71/99 (71%), Positives = 78/99 (78%)
Frame = -3
Query: 568 SLVDYYGGSNIIQEKFLXXXXXXXXXXXGSETRDVEIATHLILENIAAELHALSWMTVSP 389
SL+DYYGG+NI QEK SE RD EI HLILE+IAAELHALSWMTVSP
Sbjct: 696 SLIDYYGGTNIAQEKLSRGTGKQGVRTLSSEVRDYEIEIHLILESIAAELHALSWMTVSP 755
Query: 388 AYLERRSALPFHCDTVLRLRRLLHFADKEVSRQPEKSQV 272
AYLERR+ALPFHCD VLRLRRLLHFADKE+S QP+KSQ+
Sbjct: 756 AYLERRTALPFHCDMVLRLRRLLHFADKELSSQPDKSQL 794
>gb|EXC34516.1| Mediator of RNA polymerase II transcription subunit 13-like protein
[Morus notabilis]
Length = 1710
Score = 136 bits (343), Expect = 3e-30
Identities = 67/98 (68%), Positives = 77/98 (78%)
Frame = -3
Query: 568 SLVDYYGGSNIIQEKFLXXXXXXXXXXXGSETRDVEIATHLILENIAAELHALSWMTVSP 389
SLVD+YGG+N QEK SE ++ EI THLILE++AAEL ALSWMT+SP
Sbjct: 1610 SLVDHYGGNNFSQEKMARGLMKQGGRSSSSELKEFEIETHLILESVAAELQALSWMTISP 1669
Query: 388 AYLERRSALPFHCDTVLRLRRLLHFADKEVSRQPEKSQ 275
AYLERR+ALPFHCD VLRLRRLLHFADKE+SR+PEKSQ
Sbjct: 1670 AYLERRTALPFHCDMVLRLRRLLHFADKELSRRPEKSQ 1707
>ref|XP_006601869.1| PREDICTED: mediator of RNA polymerase II transcription subunit
13-like isoform X2 [Glycine max]
Length = 1951
Score = 135 bits (341), Expect = 6e-30
Identities = 66/97 (68%), Positives = 76/97 (78%)
Frame = -3
Query: 568 SLVDYYGGSNIIQEKFLXXXXXXXXXXXGSETRDVEIATHLILENIAAELHALSWMTVSP 389
SL+DYYGG+NI QEK + E +D EI THL+LE++AAELHALSWMTVSP
Sbjct: 1855 SLIDYYGGTNIPQEKIVRGINKQGGRSLSWEAKDFEIETHLVLESLAAELHALSWMTVSP 1914
Query: 388 AYLERRSALPFHCDTVLRLRRLLHFADKEVSRQPEKS 278
YLERR+ALPFHCD VLRLRRLLHFADKE+S+Q EKS
Sbjct: 1915 TYLERRTALPFHCDMVLRLRRLLHFADKELSKQSEKS 1951
>ref|XP_006601868.1| PREDICTED: mediator of RNA polymerase II transcription subunit
13-like isoform X1 [Glycine max]
Length = 1952
Score = 135 bits (341), Expect = 6e-30
Identities = 66/97 (68%), Positives = 76/97 (78%)
Frame = -3
Query: 568 SLVDYYGGSNIIQEKFLXXXXXXXXXXXGSETRDVEIATHLILENIAAELHALSWMTVSP 389
SL+DYYGG+NI QEK + E +D EI THL+LE++AAELHALSWMTVSP
Sbjct: 1856 SLIDYYGGTNIPQEKIVRGINKQGGRSLSWEAKDFEIETHLVLESLAAELHALSWMTVSP 1915
Query: 388 AYLERRSALPFHCDTVLRLRRLLHFADKEVSRQPEKS 278
YLERR+ALPFHCD VLRLRRLLHFADKE+S+Q EKS
Sbjct: 1916 TYLERRTALPFHCDMVLRLRRLLHFADKELSKQSEKS 1952
>ref|XP_006591430.1| PREDICTED: mediator of RNA polymerase II transcription subunit
13-like isoform X3 [Glycine max]
Length = 1951
Score = 135 bits (341), Expect = 6e-30
Identities = 66/97 (68%), Positives = 76/97 (78%)
Frame = -3
Query: 568 SLVDYYGGSNIIQEKFLXXXXXXXXXXXGSETRDVEIATHLILENIAAELHALSWMTVSP 389
SL+DYYGG+NI QEK + E +D EI THL+LE++AAELHALSWMTVSP
Sbjct: 1855 SLIDYYGGTNIPQEKIVRGINKQGGRSLSWEAKDFEIETHLVLESLAAELHALSWMTVSP 1914
Query: 388 AYLERRSALPFHCDTVLRLRRLLHFADKEVSRQPEKS 278
YLERR+ALPFHCD VLRLRRLLHFADKE+S+Q EKS
Sbjct: 1915 TYLERRTALPFHCDMVLRLRRLLHFADKELSKQSEKS 1951
>ref|XP_006591429.1| PREDICTED: mediator of RNA polymerase II transcription subunit
13-like isoform X2 [Glycine max]
Length = 1952
Score = 135 bits (341), Expect = 6e-30
Identities = 66/97 (68%), Positives = 76/97 (78%)
Frame = -3
Query: 568 SLVDYYGGSNIIQEKFLXXXXXXXXXXXGSETRDVEIATHLILENIAAELHALSWMTVSP 389
SL+DYYGG+NI QEK + E +D EI THL+LE++AAELHALSWMTVSP
Sbjct: 1856 SLIDYYGGTNIPQEKIVRGINKQGGRSLSWEAKDFEIETHLVLESLAAELHALSWMTVSP 1915
Query: 388 AYLERRSALPFHCDTVLRLRRLLHFADKEVSRQPEKS 278
YLERR+ALPFHCD VLRLRRLLHFADKE+S+Q EKS
Sbjct: 1916 TYLERRTALPFHCDMVLRLRRLLHFADKELSKQSEKS 1952
>ref|XP_006591428.1| PREDICTED: mediator of RNA polymerase II transcription subunit
13-like isoform X1 [Glycine max]
Length = 1953
Score = 135 bits (341), Expect = 6e-30
Identities = 66/97 (68%), Positives = 76/97 (78%)
Frame = -3
Query: 568 SLVDYYGGSNIIQEKFLXXXXXXXXXXXGSETRDVEIATHLILENIAAELHALSWMTVSP 389
SL+DYYGG+NI QEK + E +D EI THL+LE++AAELHALSWMTVSP
Sbjct: 1857 SLIDYYGGTNIPQEKIVRGINKQGGRSLSWEAKDFEIETHLVLESLAAELHALSWMTVSP 1916
Query: 388 AYLERRSALPFHCDTVLRLRRLLHFADKEVSRQPEKS 278
YLERR+ALPFHCD VLRLRRLLHFADKE+S+Q EKS
Sbjct: 1917 TYLERRTALPFHCDMVLRLRRLLHFADKELSKQSEKS 1953
>ref|XP_004502201.1| PREDICTED: mediator of RNA polymerase II transcription subunit
13-like isoform X2 [Cicer arietinum]
Length = 1959
Score = 135 bits (341), Expect = 6e-30
Identities = 67/97 (69%), Positives = 76/97 (78%)
Frame = -3
Query: 568 SLVDYYGGSNIIQEKFLXXXXXXXXXXXGSETRDVEIATHLILENIAAELHALSWMTVSP 389
SL+DYYGGSNI QEK + + +D E THLILE++AAELHALSWMTVSP
Sbjct: 1863 SLIDYYGGSNIPQEKIVRGVNKQGGRGLSWDAKDFETETHLILESLAAELHALSWMTVSP 1922
Query: 388 AYLERRSALPFHCDTVLRLRRLLHFADKEVSRQPEKS 278
AYLERR+ALPFHCD VLRLRRLLHFADKE+S+Q EKS
Sbjct: 1923 AYLERRTALPFHCDMVLRLRRLLHFADKELSKQSEKS 1959
>ref|XP_004502200.1| PREDICTED: mediator of RNA polymerase II transcription subunit
13-like isoform X1 [Cicer arietinum]
Length = 1949
Score = 135 bits (341), Expect = 6e-30
Identities = 67/97 (69%), Positives = 76/97 (78%)
Frame = -3
Query: 568 SLVDYYGGSNIIQEKFLXXXXXXXXXXXGSETRDVEIATHLILENIAAELHALSWMTVSP 389
SL+DYYGGSNI QEK + + +D E THLILE++AAELHALSWMTVSP
Sbjct: 1853 SLIDYYGGSNIPQEKIVRGVNKQGGRGLSWDAKDFETETHLILESLAAELHALSWMTVSP 1912
Query: 388 AYLERRSALPFHCDTVLRLRRLLHFADKEVSRQPEKS 278
AYLERR+ALPFHCD VLRLRRLLHFADKE+S+Q EKS
Sbjct: 1913 AYLERRTALPFHCDMVLRLRRLLHFADKELSKQSEKS 1949
>gb|EOY08938.1| RNA polymerase II transcription mediators isoform 3 [Theobroma cacao]
Length = 1605
Score = 133 bits (335), Expect = 3e-29
Identities = 64/99 (64%), Positives = 77/99 (77%)
Frame = -3
Query: 568 SLVDYYGGSNIIQEKFLXXXXXXXXXXXGSETRDVEIATHLILENIAAELHALSWMTVSP 389
SL+DY GG+N+ Q+K + SE RD EI HLIL+++AAELHALSWMTVSP
Sbjct: 1507 SLIDYCGGNNVSQDKVIRGIAKPAGRTLISEARDFEIDNHLILKSVAAELHALSWMTVSP 1566
Query: 388 AYLERRSALPFHCDTVLRLRRLLHFADKEVSRQPEKSQV 272
YLERR+ALPFHCD VLRLRRLLHFA+KE+SR P+K+QV
Sbjct: 1567 GYLERRTALPFHCDMVLRLRRLLHFAEKELSRPPDKTQV 1605
>gb|EOY08936.1| RNA polymerase II transcription mediators isoform 1 [Theobroma cacao]
Length = 1985
Score = 133 bits (335), Expect = 3e-29
Identities = 64/99 (64%), Positives = 77/99 (77%)
Frame = -3
Query: 568 SLVDYYGGSNIIQEKFLXXXXXXXXXXXGSETRDVEIATHLILENIAAELHALSWMTVSP 389
SL+DY GG+N+ Q+K + SE RD EI HLIL+++AAELHALSWMTVSP
Sbjct: 1887 SLIDYCGGNNVSQDKVIRGIAKPAGRTLISEARDFEIDNHLILKSVAAELHALSWMTVSP 1946
Query: 388 AYLERRSALPFHCDTVLRLRRLLHFADKEVSRQPEKSQV 272
YLERR+ALPFHCD VLRLRRLLHFA+KE+SR P+K+QV
Sbjct: 1947 GYLERRTALPFHCDMVLRLRRLLHFAEKELSRPPDKTQV 1985
>gb|EMJ06146.1| hypothetical protein PRUPE_ppa000082mg [Prunus persica]
Length = 1887
Score = 133 bits (335), Expect = 3e-29
Identities = 64/96 (66%), Positives = 76/96 (79%)
Frame = -3
Query: 568 SLVDYYGGSNIIQEKFLXXXXXXXXXXXGSETRDVEIATHLILENIAAELHALSWMTVSP 389
SL+D+YGG+N QEK + SE R++EI TH+ILE++AAELHALSWMTVSP
Sbjct: 1791 SLIDHYGGNNFSQEKLMRGNTKQVGRSPSSEARELEIETHVILESLAAELHALSWMTVSP 1850
Query: 388 AYLERRSALPFHCDTVLRLRRLLHFADKEVSRQPEK 281
AYLERR+ALPFHCD VLRLRRLLHFADK++SR EK
Sbjct: 1851 AYLERRTALPFHCDMVLRLRRLLHFADKDLSRHQEK 1886
>gb|ESW35840.1| hypothetical protein PHAVU_001G269300g [Phaseolus vulgaris]
Length = 1952
Score = 133 bits (334), Expect = 4e-29
Identities = 65/97 (67%), Positives = 75/97 (77%)
Frame = -3
Query: 568 SLVDYYGGSNIIQEKFLXXXXXXXXXXXGSETRDVEIATHLILENIAAELHALSWMTVSP 389
SL+DYYGG+NI QEK + E +D EI THL+LE+IAAELHALSWMTVSP
Sbjct: 1856 SLIDYYGGTNIPQEKVVRGINKQVGRSLSWEAKDFEIETHLVLESIAAELHALSWMTVSP 1915
Query: 388 AYLERRSALPFHCDTVLRLRRLLHFADKEVSRQPEKS 278
YLERR+ALPFHCD VLRLRRLLHFADKE+S+ +KS
Sbjct: 1916 TYLERRTALPFHCDMVLRLRRLLHFADKELSKHSDKS 1952
>gb|AGZ80689.1| hypothetical protein, partial [Phaseolus vulgaris]
gi|556807357|gb|AGZ80690.1| hypothetical protein,
partial [Phaseolus vulgaris] gi|556807359|gb|AGZ80691.1|
hypothetical protein, partial [Phaseolus vulgaris]
gi|556807361|gb|AGZ80692.1| hypothetical protein,
partial [Phaseolus vulgaris] gi|556807363|gb|AGZ80693.1|
hypothetical protein, partial [Phaseolus vulgaris]
gi|556807365|gb|AGZ80694.1| hypothetical protein,
partial [Phaseolus vulgaris] gi|556807367|gb|AGZ80695.1|
hypothetical protein, partial [Phaseolus vulgaris]
gi|556807369|gb|AGZ80696.1| hypothetical protein,
partial [Phaseolus vulgaris] gi|556807371|gb|AGZ80697.1|
hypothetical protein, partial [Phaseolus vulgaris]
gi|556807373|gb|AGZ80698.1| hypothetical protein,
partial [Phaseolus vulgaris] gi|556807375|gb|AGZ80699.1|
hypothetical protein, partial [Phaseolus vulgaris]
gi|556807379|gb|AGZ80701.1| hypothetical protein,
partial [Phaseolus vulgaris] gi|556807381|gb|AGZ80702.1|
hypothetical protein, partial [Phaseolus vulgaris]
gi|556807383|gb|AGZ80703.1| hypothetical protein,
partial [Phaseolus vulgaris] gi|556807385|gb|AGZ80704.1|
hypothetical protein, partial [Phaseolus vulgaris]
gi|556807387|gb|AGZ80705.1| hypothetical protein,
partial [Phaseolus vulgaris] gi|556807389|gb|AGZ80706.1|
hypothetical protein, partial [Phaseolus vulgaris]
gi|556807391|gb|AGZ80707.1| hypothetical protein,
partial [Phaseolus vulgaris] gi|556807393|gb|AGZ80708.1|
hypothetical protein, partial [Phaseolus vulgaris]
gi|556807395|gb|AGZ80709.1| hypothetical protein,
partial [Phaseolus vulgaris] gi|556807397|gb|AGZ80710.1|
hypothetical protein, partial [Phaseolus vulgaris]
Length = 119
Score = 133 bits (334), Expect = 4e-29
Identities = 65/97 (67%), Positives = 75/97 (77%)
Frame = -3
Query: 568 SLVDYYGGSNIIQEKFLXXXXXXXXXXXGSETRDVEIATHLILENIAAELHALSWMTVSP 389
SL+DYYGG+NI QEK + E +D EI THL+LE+IAAELHALSWMTVSP
Sbjct: 23 SLIDYYGGTNIPQEKVVRGINKQVGRSLSWEAKDFEIETHLVLESIAAELHALSWMTVSP 82
Query: 388 AYLERRSALPFHCDTVLRLRRLLHFADKEVSRQPEKS 278
YLERR+ALPFHCD VLRLRRLLHFADKE+S+ +KS
Sbjct: 83 TYLERRTALPFHCDMVLRLRRLLHFADKELSKHSDKS 119
>ref|XP_004296201.1| PREDICTED: mediator of RNA polymerase II transcription subunit
13-like [Fragaria vesca subsp. vesca]
Length = 1952
Score = 131 bits (330), Expect = 1e-28
Identities = 63/98 (64%), Positives = 76/98 (77%)
Frame = -3
Query: 568 SLVDYYGGSNIIQEKFLXXXXXXXXXXXGSETRDVEIATHLILENIAAELHALSWMTVSP 389
SL+D+YGG+N QEK + GSE R+ E H ILE++AAELHALSWMT+SP
Sbjct: 1852 SLIDHYGGNNFSQEKIMRGNAKQLGRSPGSEAREFETEAHAILESVAAELHALSWMTLSP 1911
Query: 388 AYLERRSALPFHCDTVLRLRRLLHFADKEVSRQPEKSQ 275
AYL+RR+ALPFHCD VLRLRRLLHFADKE+S+ PEK+Q
Sbjct: 1912 AYLDRRTALPFHCDMVLRLRRLLHFADKELSKHPEKAQ 1949