BLASTX nr result

ID: Atropa21_contig00031817 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00031817
         (621 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001265878.1| uncharacterized protein LOC101244672 [Solanu...    70   4e-10
ref|XP_006347212.1| PREDICTED: protein argonaute MEL1-like [Sola...    70   5e-10
ref|XP_006381344.1| hypothetical protein POPTR_0006s12010g [Popu...    58   2e-06

>ref|NP_001265878.1| uncharacterized protein LOC101244672 [Solanum lycopersicum]
           gi|409127963|gb|AFV15384.1| AGO5 [Solanum lycopersicum]
          Length = 1011

 Score = 70.5 bits (171), Expect = 4e-10
 Identities = 49/120 (40%), Positives = 61/120 (50%), Gaps = 15/120 (12%)
 Frame = -3

Query: 340 GGRGRGTVNTXXXXXXXXXXXXP------SVSSVTHVVEQKLSLQPYSSTQPPA---PTL 188
           GGRGRGT ++                    VSS+T  VEQKLSLQP +S  PPA   P  
Sbjct: 61  GGRGRGTYSSGGSPSYNAPPMYHHQQQSMEVSSMTREVEQKLSLQPSTSANPPARPQPAQ 120

Query: 187 ASGV*SQQPAA-LPAXXXXXTV-----QPSPKSKKAIRIPARPGYGSVGRKCLLKANHLL 26
            S    Q P A +PA     +      +P P S K+IR P RP  G +GRKC+++ANH L
Sbjct: 121 QSSPPVQPPVATIPAHLAGPSTSTQPPRPPPVSSKSIRPPPRPDNGKLGRKCVVRANHFL 180


>ref|XP_006347212.1| PREDICTED: protein argonaute MEL1-like [Solanum tuberosum]
          Length = 1025

 Score = 70.1 bits (170), Expect = 5e-10
 Identities = 40/87 (45%), Positives = 51/87 (58%), Gaps = 5/87 (5%)
 Frame = -3

Query: 271 SVSSVTHVVEQKLSLQPYSSTQPPAPTLASGV*SQQPAALPAXXXXXTV-----QPSPKS 107
           +VSS+T  VEQKLSLQP +S  PPA        S   A +PA     +      +P P S
Sbjct: 102 AVSSMTREVEQKLSLQPSTSANPPAGPQPVQQSSPPVATIPAHLAGPSTSTQPPRPPPVS 161

Query: 106 KKAIRIPARPGYGSVGRKCLLKANHLL 26
            K +R P RP YG++GR+CL+KANH L
Sbjct: 162 SKNMRPPPRPDYGTIGRRCLVKANHFL 188


>ref|XP_006381344.1| hypothetical protein POPTR_0006s12010g [Populus trichocarpa]
           gi|550336046|gb|ERP59141.1| hypothetical protein
           POPTR_0006s12010g [Populus trichocarpa]
          Length = 927

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 39/111 (35%), Positives = 56/111 (50%), Gaps = 2/111 (1%)
 Frame = -3

Query: 352 PSLGGGRGRGTVNTXXXXXXXXXXXXPSVSSVTHV--VEQKLSLQPYSSTQPPAPTLASG 179
           P+ GGGRGRG                 S+SSV+ +    ++LS+Q    T+PPAPT    
Sbjct: 13  PTKGGGRGRG--RGAPLPSPMASSEADSISSVSQLGGEMERLSVQ----TEPPAPT---- 62

Query: 178 V*SQQPAALPAXXXXXTVQPSPKSKKAIRIPARPGYGSVGRKCLLKANHLL 26
              Q PAA+PA       Q       +++   RP +G+VG +CL++ANH L
Sbjct: 63  ---QAPAAIPAPQQQKQQQQQLVPASSVKFAQRPDHGTVGSRCLIRANHFL 110


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