BLASTX nr result
ID: Atropa21_contig00031747
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00031747
(1565 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004239568.1| PREDICTED: putative ribonuclease H protein A... 127 3e-34
ref|XP_004253445.1| PREDICTED: putative ribonuclease H protein A... 130 4e-33
ref|XP_004228797.1| PREDICTED: putative ribonuclease H protein A... 133 3e-32
ref|XP_004253259.1| PREDICTED: putative ribonuclease H protein A... 119 5e-32
ref|XP_004243166.1| PREDICTED: putative ribonuclease H protein A... 122 1e-31
ref|XP_004253442.1| PREDICTED: putative ribonuclease H protein A... 117 1e-30
ref|XP_004242524.1| PREDICTED: uncharacterized protein LOC101258... 133 2e-30
ref|XP_004253275.1| PREDICTED: uncharacterized protein LOC101268... 131 4e-30
ref|XP_004253443.1| PREDICTED: putative ribonuclease H protein A... 114 7e-30
ref|XP_004248595.1| PREDICTED: uncharacterized protein LOC101261... 124 3e-29
ref|XP_004253498.1| PREDICTED: putative ribonuclease H protein A... 112 3e-29
ref|XP_006367184.1| PREDICTED: uncharacterized protein LOC102601... 111 2e-28
ref|XP_004253499.1| PREDICTED: putative ribonuclease H protein A... 100 2e-27
ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein A... 109 2e-27
ref|XP_004244918.1| PREDICTED: putative ribonuclease H protein A... 118 5e-27
ref|XP_004253372.1| PREDICTED: putative ribonuclease H protein A... 101 7e-27
ref|XP_004234855.1| PREDICTED: putative ribonuclease H protein A... 107 7e-27
ref|XP_004248946.1| PREDICTED: putative ribonuclease H protein A... 105 3e-26
gb|ABI34321.1| RNase H family protein [Solanum demissum] 106 5e-25
ref|XP_004253338.1| PREDICTED: putative ribonuclease H protein A... 108 1e-24
>ref|XP_004239568.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 308
Score = 127 bits (320), Expect(2) = 3e-34
Identities = 74/222 (33%), Positives = 109/222 (49%)
Frame = -3
Query: 843 RIINNTYHQTVMVVHKQFKTITPFMEWNKLLEISEHAQIHINTIAVKWNLPDIGVVKLNT 664
R+ Y T ++ F I W L++ SE + I V WN P +K+NT
Sbjct: 84 RVKYAVYKDTFKMLKIAFPHIKWPASWTALIQTSEKCKHEIKVCMVAWNRPPEQWIKINT 143
Query: 663 DGCSKGNPGPSGGKDIIRDHRGNMITAYAVYHGNITNNMAEAMALKVGIE*CMNNGINKL 484
DG + N G G I+RD G M+ A+A G +NN AE A G+ + G +
Sbjct: 144 DGSALTNLGQIGAGGILRDREGKMVLAFATPLGEGSNNKAETAAALFGLSWALELGYRNI 203
Query: 483 EIESDSKILVDWILKKSKPPWQICTIVEQVQHNLECFHDKTIQHFFRECNRVADSLAN*G 304
IE DS+++V WI KK+ P W + +E++QH + + H FRE N VADSL+
Sbjct: 204 LIELDSQLVVQWISKKTAPHWSVTKQIERIQHLIMQTQNFKCTHIFREANWVADSLSKHS 263
Query: 303 LNCDNIVWMHSFMELPRETRDELKVDKMQLPSFRNSIVKKLF 178
N S +LP+E + ++D + +PSFR KK+F
Sbjct: 264 HNTTAPQVYFSSTQLPKEAQAYYQMDLLNMPSFRRKKTKKIF 305
Score = 46.2 bits (108), Expect(2) = 3e-34
Identities = 20/71 (28%), Positives = 32/71 (45%)
Frame = -2
Query: 1081 DHLFNSSMISIKVWKHFAQMLGIREGTGNIRQRALSWWLTKEKNPVQSMMLQXXXXXXXX 902
DH FNS + +VW FA G++ +++ R WW + +N ++LQ
Sbjct: 5 DHTFNSGPFAARVWNFFAASAGLQADHSSLQARVQQWWTARPQNEGHQLLLQATPTFICW 64
Query: 901 XXXKERCKSRY 869
K RC +Y
Sbjct: 65 NLWKNRCACKY 75
>ref|XP_004253445.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 338
Score = 130 bits (327), Expect(2) = 4e-33
Identities = 74/222 (33%), Positives = 113/222 (50%)
Frame = -3
Query: 843 RIINNTYHQTVMVVHKQFKTITPFMEWNKLLEISEHAQIHINTIAVKWNLPDIGVVKLNT 664
R+ Y T ++ F I W L++ +E+ + I V WN P +K+NT
Sbjct: 114 RVKYAVYKDTFKMLKMAFPHINWPGSWAALVQKAENCKHEIQVSMVTWNRPSEQWIKINT 173
Query: 663 DGCSKGNPGPSGGKDIIRDHRGNMITAYAVYHGNITNNMAEAMALKVGIE*CMNNGINKL 484
DG + NPG +G I+RD G M+ A+A G TNN AEA A+ G+ + G +
Sbjct: 174 DGSALTNPGQTGAGGILRDKEGKMVMAFATPLGEGTNNTAEAEAVLFGLSWALELGHRNI 233
Query: 483 EIESDSKILVDWILKKSKPPWQICTIVEQVQHNLECFHDKTIQHFFRECNRVADSLAN*G 304
+IE D++++V WI +K P W + +E++QH + + H FRE N VAD+L+
Sbjct: 234 QIELDAQLVVKWITRKEVPHWSVINQIERIQHLIMQTQNFMCTHIFREANWVADALSKHS 293
Query: 303 LNCDNIVWMHSFMELPRETRDELKVDKMQLPSFRNSIVKKLF 178
N S +LPRE + ++D +PSFR KK+F
Sbjct: 294 HNIPAPQVYFSNNQLPREAQAYYQMDLRNMPSFRRKKTKKIF 335
Score = 39.7 bits (91), Expect(2) = 4e-33
Identities = 19/74 (25%), Positives = 31/74 (41%)
Frame = -2
Query: 1090 ETQDHLFNSSMISIKVWKHFAQMLGIREGTGNIRQRALSWWLTKEKNPVQSMMLQXXXXX 911
+T DH FNS + VWK F G++ ++ + WW + +N ++LQ
Sbjct: 32 DTIDHTFNSGPFAAGVWKAFTAGAGLQADRTPLQAKLRQWWTARPRNEGHQLLLQATPVF 91
Query: 910 XXXXXXKERCKSRY 869
K C +Y
Sbjct: 92 IVWNLWKNICACKY 105
>ref|XP_004228797.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 389
Score = 133 bits (334), Expect(2) = 3e-32
Identities = 73/225 (32%), Positives = 116/225 (51%), Gaps = 3/225 (1%)
Frame = -3
Query: 846 YRIINNTYHQTVMVVHKQFKTITPFMEWNKLLEISEHAQIHINTIAVKWNLPDIGVVKLN 667
YR+ + + + ++ + I W +L + E Q H+ V W P G+ KLN
Sbjct: 164 YRVESGIFKDIMQIIKAVYPNIPWQSSWERLFNLVEQCQQHLKVTMVNWERPPEGIHKLN 223
Query: 666 TDGCSKGNPGPSGGKDIIRDHRGNMITAYAVYHGNITNNMAEAMALKVGIE*CMNNGINK 487
TDG +K N G GG I+RDH+G +I A+A+ G TNN AE A G++ C +G K
Sbjct: 224 TDGSAKHNTGKIGGGGILRDHQGKLIYAFAIPLGFGTNNFAEIQAALHGLQWCQQHGFEK 283
Query: 486 LEIESDSKILVDWILKKSKPPWQICTIVEQVQ---HNLECFHDKTIQHFFRECNRVADSL 316
+ +E DS++L WI+ KS PW+ ++Q+Q + +E F K H +RE N AD L
Sbjct: 284 IILEVDSELLHKWIINKSSVPWRCLHYIQQIQNISNKMEVFQCK---HIYREANGTADLL 340
Query: 315 AN*GLNCDNIVWMHSFMELPRETRDELKVDKMQLPSFRNSIVKKL 181
A + D I ++ +L + ++KM + FR +K++
Sbjct: 341 AKWSHSMDIIQQFYTSQQLEGVIKGSYILEKMGMQLFRRRKLKRI 385
Score = 34.3 bits (77), Expect(2) = 3e-32
Identities = 22/86 (25%), Positives = 35/86 (40%)
Frame = -2
Query: 1105 RSGNQETQDHLFNSSMISIKVWKHFAQMLGIREGTGNIRQRALSWWLTKEKNPVQSMMLQ 926
R G + + H+ + + +WK + LGI N+R LSW N V ++L
Sbjct: 79 RKGKDDLK-HILITGNFAKYIWKIHTKRLGIAIVNTNLRSTLLSWRRLTSYNEVHKLILH 137
Query: 925 XXXXXXXXXXXKERCKSRYENLNMSL 848
K RC ++Y N S+
Sbjct: 138 ILPNIICWNLWKNRCSAKYGNKPSSI 163
>ref|XP_004253259.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 668
Score = 119 bits (299), Expect(2) = 5e-32
Identities = 70/216 (32%), Positives = 104/216 (48%)
Frame = -3
Query: 825 YHQTVMVVHKQFKTITPFMEWNKLLEISEHAQIHINTIAVKWNLPDIGVVKLNTDGCSKG 646
Y T ++ F I W L++ +E + I WN P +K+NTDG +
Sbjct: 453 YKDTFKMLKSAFPCINWPGNWAALIQTAERCKHEIKVCMTTWNRPPEQWIKINTDGSALI 512
Query: 645 NPGPSGGKDIIRDHRGNMITAYAVYHGNITNNMAEAMALKVGIE*CMNNGINKLEIESDS 466
N G G IIRD G ++ A+A G+ TNN AEA A G+ + G + IE DS
Sbjct: 513 NTGHCGAGGIIRDKEGKIVLAFATPLGDGTNNKAEAEAALFGLSWALELGHRNILIELDS 572
Query: 465 KILVDWILKKSKPPWQICTIVEQVQHNLECFHDKTIQHFFRECNRVADSLAN*GLNCDNI 286
+++V WI KK P W + +E++Q + + H FRE N VAD+L+
Sbjct: 573 QLVVQWISKKEPPHWNVINQIERIQQLIMQTQNFKCNHIFREANWVADALSKHSHTIATP 632
Query: 285 VWMHSFMELPRETRDELKVDKMQLPSFRNSIVKKLF 178
S +LPRE + ++D +P+FR KK+F
Sbjct: 633 QVYFSNSQLPREAQAYYQMDLQNMPNFRRKKTKKIF 668
Score = 47.0 bits (110), Expect(2) = 5e-32
Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Frame = -2
Query: 1081 DHLFNSSMISIKVWKHFAQMLGIREGTGNIRQRALSWWLTKEKNPVQSMMLQXXXXXXXX 902
+H FNS + +VW+ F G++E +++ R WW + +N ++LQ
Sbjct: 368 EHTFNSGSFATRVWRAFTTTAGLQEDQSSVQARLRQWWTARLRNASHQLLLQAMPIFIVW 427
Query: 901 XXXKERCKSRY--ENLNMSLIQ 842
K RC +Y ++ N+S ++
Sbjct: 428 NLWKNRCACKYGGKSTNISRVK 449
Score = 79.0 bits (193), Expect(2) = 2e-17
Identities = 34/91 (37%), Positives = 55/91 (60%)
Frame = -3
Query: 1413 WSNFCLPTDGGGIGVRSVQEIADSFSAKLWWNFRT*ESLWIKFMTAKYSIRLHPVARKWN 1234
W N P D GGIG+R++ ++ SF K WW FRT ++LW F+ AKY R +P+++KW+
Sbjct: 142 WKNLSYPYDEGGIGMRNLHDVCRSFQFKQWWIFRTKQTLWGDFLKAKYCQRSNPMSKKWD 201
Query: 1233 YTHSHTWRRLMKIRNKVDYITH*KINRGNSN 1141
S TW+ ++ R ++ K+ G+S+
Sbjct: 202 TGDSLTWKHMLITRQHMEQHIQWKLQAGDSH 232
Score = 38.5 bits (88), Expect(2) = 2e-17
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -1
Query: 1502 PKTFFKQIESVFANFFWGQYEGKYKYHWS 1416
P + QI+ + A+FFWG + + KYHWS
Sbjct: 112 PNSIILQIQRIIADFFWGWHNNRKKYHWS 140
>ref|XP_004243166.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 316
Score = 122 bits (307), Expect(2) = 1e-31
Identities = 68/216 (31%), Positives = 106/216 (49%)
Frame = -3
Query: 825 YHQTVMVVHKQFKTITPFMEWNKLLEISEHAQIHINTIAVKWNLPDIGVVKLNTDGCSKG 646
Y T ++ F I W L + SE + I V WN P +K+NTDG +
Sbjct: 98 YKDTFKMLQNTFPHIKWPSNWTALYQTSEKCKHDIKVCKVAWNRPPEEWIKINTDGSAIN 157
Query: 645 NPGPSGGKDIIRDHRGNMITAYAVYHGNITNNMAEAMALKVGIE*CMNNGINKLEIESDS 466
NPG G I+RD G ++ A+A G +NN AE A + G+ ++ + +E DS
Sbjct: 158 NPGKIGAGGILRDTEGRLVLAFATSLGEGSNNQAEMEAAQFGLSWAIDLDYRNIILEVDS 217
Query: 465 KILVDWILKKSKPPWQICTIVEQVQHNLECFHDKTIQHFFRECNRVADSLAN*GLNCDNI 286
+I+V WI KK+ W + +E++Q ++ H +H FRE N ADSL+
Sbjct: 218 QIVVQWITKKTTHHWSVSNQLEKIQQLIQRAHKFKCEHIFREANWTADSLSKHSHGTTGP 277
Query: 285 VWMHSFMELPRETRDELKVDKMQLPSFRNSIVKKLF 178
+ ++P+E + ++D M +PSFR KK+F
Sbjct: 278 QLYFNNNQMPKEAQAYYRMDLMNMPSFRRKKTKKIF 313
Score = 42.7 bits (99), Expect(2) = 1e-31
Identities = 19/80 (23%), Positives = 35/80 (43%)
Frame = -2
Query: 1108 IRSGNQETQDHLFNSSMISIKVWKHFAQMLGIREGTGNIRQRALSWWLTKEKNPVQSMML 929
++ ++ +H FNS + +VW F+ G++E +++ R WW N ++L
Sbjct: 4 LKRAGLDSIEHTFNSGQFAGRVWSFFSASAGLKEEQPSLQARLRQWWSATATNAGHQLLL 63
Query: 928 QXXXXXXXXXXXKERCKSRY 869
Q K RC +Y
Sbjct: 64 QATPTFVCWNLWKNRCACKY 83
>ref|XP_004253442.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 775
Score = 117 bits (293), Expect(2) = 1e-30
Identities = 68/222 (30%), Positives = 107/222 (48%)
Frame = -3
Query: 843 RIINNTYHQTVMVVHKQFKTITPFMEWNKLLEISEHAQIHINTIAVKWNLPDIGVVKLNT 664
R+ Y ++ F I W L+ SE + V WN P +K+NT
Sbjct: 551 RVKYAVYKDNFKMMKNAFPHIQWPAHWTALIHTSEKCKHDTKVCQVVWNRPPEEWIKINT 610
Query: 663 DGCSKGNPGPSGGKDIIRDHRGNMITAYAVYHGNITNNMAEAMALKVGIE*CMNNGINKL 484
DG + NPG G IIR+ G ++ A+A G +NN AE A +G+ + G +
Sbjct: 611 DGSALTNPGNIGAGGIIRNKEGKLVMAFATSLGEGSNNKAETEAALIGLVHALELGYRNI 670
Query: 483 EIESDSKILVDWILKKSKPPWQICTIVEQVQHNLECFHDKTIQHFFRECNRVADSLAN*G 304
+E DS+++V WI KKS W + +E++Q+ + + QH FRE N VAD+L+
Sbjct: 671 IMELDSQLIVQWISKKSVHHWSVSNQIERLQYLIMQTQNFKCQHIFREANWVADALSKHS 730
Query: 303 LNCDNIVWMHSFMELPRETRDELKVDKMQLPSFRNSIVKKLF 178
+ + +LP+E ++D + +PSFR KK+F
Sbjct: 731 HHITSPQLYFDSNQLPKEANAYYRMDLLNMPSFRRRKTKKIF 772
Score = 44.3 bits (103), Expect(2) = 1e-30
Identities = 20/71 (28%), Positives = 33/71 (46%)
Frame = -2
Query: 1081 DHLFNSSMISIKVWKHFAQMLGIREGTGNIRQRALSWWLTKEKNPVQSMMLQXXXXXXXX 902
+H+FN+ + +VWK FA G+++ ++ R WW K N ++LQ
Sbjct: 472 NHIFNTGNFAGRVWKSFAAGAGLQQDQQTLQARLKQWWTAKSCNAGHQLLLQATPIFICW 531
Query: 901 XXXKERCKSRY 869
K RC +Y
Sbjct: 532 NLWKNRCACKY 542
Score = 104 bits (259), Expect(3) = 9e-28
Identities = 41/103 (39%), Positives = 65/103 (63%)
Frame = -3
Query: 1413 WSNFCLPTDGGGIGVRSVQEIADSFSAKLWWNFRT*ESLWIKFMTAKYSIRLHPVARKWN 1234
W N P + GG+G+R++ ++ SF K WW FRT ++LW F+ AKY R +PV++KW+
Sbjct: 232 WKNLSYPYEEGGVGMRNLNDVCKSFQFKQWWTFRTKQTLWGDFLRAKYCQRSNPVSKKWD 291
Query: 1233 YTHSHTWRRLMKIRNKVDYITH*KINRGNSNLWWDNWIGSDKL 1105
S TW+ ++ IR +V+ ++ GN + WWDNW+G+ L
Sbjct: 292 TGQSLTWKHMLAIRQQVEQHIQWQLQAGNCSFWWDNWMGTGPL 334
Score = 40.0 bits (92), Expect(3) = 9e-28
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = -1
Query: 1502 PKTFFKQIESVFANFFWGQYEGKYKYHWS 1416
P T KQI+ + A+FFWG KYHWS
Sbjct: 202 PNTIIKQIQMLIADFFWGWQNNSKKYHWS 230
Score = 28.1 bits (61), Expect(3) = 9e-28
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -2
Query: 1561 ILIKYVLSVIPVHLLSICMP 1502
+L KYVL +P+HLLS P
Sbjct: 182 VLSKYVLQALPIHLLSAVTP 201
>ref|XP_004242524.1| PREDICTED: uncharacterized protein LOC101258077 [Solanum
lycopersicum]
Length = 1454
Score = 133 bits (334), Expect(2) = 2e-30
Identities = 71/222 (31%), Positives = 115/222 (51%)
Frame = -3
Query: 846 YRIINNTYHQTVMVVHKQFKTITPFMEWNKLLEISEHAQIHINTIAVKWNLPDIGVVKLN 667
YR+ + + V+ F +I WN L+ I E + H + VKWN PD+G KLN
Sbjct: 1229 YRVQYGIFKNIMQVITIVFPSIPWQTSWNNLINIVEQCKQHYKILIVKWNKPDLGKYKLN 1288
Query: 666 TDGCSKGNPGPSGGKDIIRDHRGNMITAYAVYHGNITNNMAEAMALKVGIE*CMNNGINK 487
TDG + N G GG I+RD++G +I A+++ G TNN AE A G++ C +G K
Sbjct: 1289 TDGSALQNSGKIGGGGILRDNQGKIIYAFSLPFGFGTNNFAEIKAALHGLDWCEQHGYKK 1348
Query: 486 LEIESDSKILVDWILKKSKPPWQICTIVEQVQHNLECFHDKTIQHFFRECNRVADSLAN* 307
+E+E DSK+L +WI PW+ +++Q+ + H +RE N AD L+
Sbjct: 1349 IELEVDSKLLCNWINSNINIPWRYEELIQQIHQIIRKMDQFQCHHIYREANCTADLLSKW 1408
Query: 306 GLNCDNIVWMHSFMELPRETRDELKVDKMQLPSFRNSIVKKL 181
N + + ++ +L R ++KM + +FR +K++
Sbjct: 1409 SHNLEILQKFYTTRQLKEPIRGSYLLEKMGVQNFRRRKLKRI 1450
Score = 27.7 bits (60), Expect(2) = 2e-30
Identities = 15/78 (19%), Positives = 31/78 (39%)
Frame = -2
Query: 1081 DHLFNSSMISIKVWKHFAQMLGIREGTGNIRQRALSWWLTKEKNPVQSMMLQXXXXXXXX 902
+H+ + + +WK ++ +G+ +R L W + N V +++
Sbjct: 1151 NHILINGNFAKYIWKIYSSAVGVLPINTTLRDLLLQWRNQQYTNEVHKLLIHILPNFICW 1210
Query: 901 XXXKERCKSRYENLNMSL 848
K RC +Y N S+
Sbjct: 1211 NLWKNRCAVKYGLKNSSI 1228
Score = 101 bits (251), Expect(3) = 6e-25
Identities = 44/98 (44%), Positives = 61/98 (62%)
Frame = -3
Query: 1413 WSNFCLPTDGGGIGVRSVQEIADSFSAKLWWNFRT*ESLWIKFMTAKYSIRLHPVARKWN 1234
W+N PT+ GGIGVR ++++ +F K WW FRT SLW KF+ AKY+ R +PVA+K+N
Sbjct: 913 WNNMAFPTNEGGIGVRLIEDMCTAFQYKQWWAFRTNNSLWSKFLKAKYNQRANPVAKKYN 972
Query: 1233 YTHSHTWRRLMKIRNKVDYITH*KINRGNSNLWWDNWI 1120
S WR L + R KV+ + I G + WWD W+
Sbjct: 973 TGDSIVWRYLTRNRQKVESLIKWHIQSGTCSFWWDCWL 1010
Score = 37.7 bits (86), Expect(3) = 6e-25
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = -1
Query: 1502 PKTFFKQIESVFANFFWGQYEGKYKYHWS 1416
PKT I+ V A+FFWG + KYHWS
Sbjct: 883 PKTILNSIKKVIADFFWGIEKDGKKYHWS 911
Score = 23.9 bits (50), Expect(3) = 6e-25
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -2
Query: 1558 LIKYVLSVIPVHLLSICMP 1502
L+K+VL +P+H LS P
Sbjct: 864 LVKHVLQSMPIHTLSAISP 882
>ref|XP_004253275.1| PREDICTED: uncharacterized protein LOC101268853 [Solanum
lycopersicum]
Length = 1333
Score = 131 bits (329), Expect(2) = 4e-30
Identities = 71/225 (31%), Positives = 118/225 (52%), Gaps = 3/225 (1%)
Frame = -3
Query: 846 YRIINNTYHQTVMVVHKQFKTITPFMEWNKLLEISEHAQIHINTIAVKWNLPDIGVVKLN 667
+R+ + + + V+ F +I WN L+ I EH + V WN P +G KLN
Sbjct: 1108 HRVKYGIFKEVMQVIKLVFPSIPWQSNWNNLVNIIEHCSQQYKIVLVSWNKPALGTYKLN 1167
Query: 666 TDGCSKGNPGPSGGKDIIRDHRGNMITAYAVYHGNITNNMAEAMALKVGIE*CMNNGINK 487
TDG + N G GG +RD +G ++ A+++ G TNN AE A G+E C +G K
Sbjct: 1168 TDGSAIQNSGKIGGGGNLRDFQGKIVYAFSIPFGVGTNNFAEIKAALYGMEWCEQHGYKK 1227
Query: 486 LEIESDSKILVDWILKKSKPPWQICTIVEQVQH---NLECFHDKTIQHFFRECNRVADSL 316
+E+E +S++L +WI +K PW+ +V+Q+Q +E FH H +RE N AD L
Sbjct: 1228 VELEVNSELLYNWIKNTTKIPWRYEDLVQQIQQISMKMEQFH---CHHIYREANNTADLL 1284
Query: 315 AN*GLNCDNIVWMHSFMELPRETRDELKVDKMQLPSFRNSIVKKL 181
+ NC+ + ++ +L + ++KM + +FR +K++
Sbjct: 1285 SKWSNNCEIVQHFYTTRQLEGAIKGSYILEKMGVQNFRRRKLKRI 1329
Score = 28.9 bits (63), Expect(2) = 4e-30
Identities = 20/86 (23%), Positives = 31/86 (36%)
Frame = -2
Query: 1105 RSGNQETQDHLFNSSMISIKVWKHFAQMLGIREGTGNIRQRALSWWLTKEKNPVQSMMLQ 926
R G + L N + +WK A LGI +R + L W + N V +++
Sbjct: 1023 RKGKDDINHILINGNFAKY-IWKIHAATLGIIPVNTTLRAQLLHWRNQQVNNEVHKLLIH 1081
Query: 925 XXXXXXXXXXXKERCKSRYENLNMSL 848
K RC +Y S+
Sbjct: 1082 ILPNIICWNLWKNRCAVKYGKKRSSI 1107
Score = 99.8 bits (247), Expect(2) = 8e-20
Identities = 44/103 (42%), Positives = 61/103 (59%)
Frame = -3
Query: 1413 WSNFCLPTDGGGIGVRSVQEIADSFSAKLWWNFRT*ESLWIKFMTAKYSIRLHPVARKWN 1234
W N PT GGIGVR ++++ +F K WW+FRT SLW +F+ AKY R +PVA+K++
Sbjct: 791 WENMAYPTSEGGIGVRLLEDVCTAFQYKQWWDFRTKNSLWSQFLQAKYCQRANPVAKKYD 850
Query: 1233 YTHSHTWRRLMKIRNKVDYITH*KINRGNSNLWWDNWIGSDKL 1105
S WR L + R KV+ I G + WWDNW+ + L
Sbjct: 851 TGDSLIWRYLTRNRLKVESFIKWNITSGTCSFWWDNWLDIENL 893
Score = 25.8 bits (55), Expect(2) = 8e-20
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -2
Query: 1564 MILIKYVLSVIPVHLLSICMP 1502
+IL+K+VL IP+H L+ P
Sbjct: 740 IILVKHVLQSIPIHTLAAISP 760
>ref|XP_004253443.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 775
Score = 114 bits (284), Expect(2) = 7e-30
Identities = 65/211 (30%), Positives = 104/211 (49%), Gaps = 4/211 (1%)
Frame = -3
Query: 798 KQFKTITPFMEW----NKLLEISEHAQIHINTIAVKWNLPDIGVVKLNTDGCSKGNPGPS 631
K K P ++W L+ SE + V WN P +K+NTDG + NPG
Sbjct: 562 KMMKNAFPHIQWPAHWTALIHTSEKCKHDTKVCQVVWNRPPEEWIKINTDGSALTNPGKI 621
Query: 630 GGKDIIRDHRGNMITAYAVYHGNITNNMAEAMALKVGIE*CMNNGINKLEIESDSKILVD 451
G IIR+ G ++ A+A G T N A+ A +G+ + G + +E DS+++V
Sbjct: 622 GAGGIIRNKEGKLVMAFATSLGEGTKNKAKTEAALIGLVHALELGYRNIIMELDSQLIVQ 681
Query: 450 WILKKSKPPWQICTIVEQVQHNLECFHDKTIQHFFRECNRVADSLAN*GLNCDNIVWMHS 271
WI KKS W + +E++Q+ + + QH F+E N VAD+L+ + +
Sbjct: 682 WISKKSVHHWSVSNQIERLQYLIMQTQNFKCQHIFKEANWVADALSKHNHHITSPQLYFD 741
Query: 270 FMELPRETRDELKVDKMQLPSFRNSIVKKLF 178
+LP+E ++D + +PSFR KK+F
Sbjct: 742 SNQLPKEANAYYRMDLLNMPSFRRRKTKKIF 772
Score = 45.4 bits (106), Expect(2) = 7e-30
Identities = 21/71 (29%), Positives = 33/71 (46%)
Frame = -2
Query: 1081 DHLFNSSMISIKVWKHFAQMLGIREGTGNIRQRALSWWLTKEKNPVQSMMLQXXXXXXXX 902
+H+FN+ + +VWK FA G++E ++ R WW K N ++LQ
Sbjct: 472 NHIFNTGNFAGRVWKSFAAGAGLQEDQQTLQARLKQWWTAKSCNAGHQLLLQATPIFICW 531
Query: 901 XXXKERCKSRY 869
K RC +Y
Sbjct: 532 NLWKNRCACKY 542
Score = 97.8 bits (242), Expect(3) = 5e-26
Identities = 39/103 (37%), Positives = 64/103 (62%)
Frame = -3
Query: 1413 WSNFCLPTDGGGIGVRSVQEIADSFSAKLWWNFRT*ESLWIKFMTAKYSIRLHPVARKWN 1234
W N P + GG+G+R++ ++ SF K WW F+T ++LW F+ AKY R +PV++KW+
Sbjct: 232 WKNLSYPYEEGGVGMRNLNDVCKSFQFKQWWTFQTKQTLWGDFLRAKYCQRSNPVSKKWD 291
Query: 1233 YTHSHTWRRLMKIRNKVDYITH*KINRGNSNLWWDNWIGSDKL 1105
S TW+ ++ IR +V+ ++ GN + WWDN +G+ L
Sbjct: 292 TGQSLTWKHMLAIRQQVEQHIQWQLQAGNCSFWWDNCMGTGPL 334
Score = 39.3 bits (90), Expect(3) = 5e-26
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -1
Query: 1502 PKTFFKQIESVFANFFWGQYEGKYKYHWS 1416
P T KQI+ A+FFWG KYHWS
Sbjct: 202 PNTIIKQIQMFIADFFWGWQNNSKKYHWS 230
Score = 29.6 bits (65), Expect(3) = 5e-26
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -2
Query: 1561 ILIKYVLSVIPVHLLSICMP 1502
+L KYVL +P+HLLS+ P
Sbjct: 182 VLSKYVLQALPIHLLSVVTP 201
>ref|XP_004248595.1| PREDICTED: uncharacterized protein LOC101261371 [Solanum
lycopersicum]
Length = 1246
Score = 124 bits (310), Expect(2) = 3e-29
Identities = 69/213 (32%), Positives = 111/213 (52%), Gaps = 2/213 (0%)
Frame = -3
Query: 846 YRIINNTYHQTVMVVHKQFKTITPFMEWNKLLEISEHAQIHINTIAVKWNLPDIGVVKLN 667
+R+ + + V+ F +I WNKL+ I EH + + V WN P +G KLN
Sbjct: 1036 HRVQYGIFKDVMQVIKIVFPSIPWQSSWNKLINIVEHCKQQYKIVLVSWNKPGLGTYKLN 1095
Query: 666 TDGCSKGNPGPSGGKDIIRDHRGNMITAYAVYHGNITNNMAEAMALKVGIE*CMNNGINK 487
TDG + N G GG I+RDH+G ++ A+++ G TNN+AE A G+E C +G +
Sbjct: 1096 TDGSALQNSGKIGGGGILRDHQGKIVYAFSLPFGFGTNNIAEIKAALYGLEWCDQHGYKR 1155
Query: 486 LEIESDSKILVDWILKKSKPPWQICTIVEQVQHNLECFHDKTIQHFFRECNRVADSLAN* 307
+E+E DS++L +WI K+ PW +++Q++ H +RE N AD L+
Sbjct: 1156 VELEVDSQLLCNWIKNKTNIPWIYEDLIQQIKQITRKIEQFQCHHIYREANITADLLSK- 1214
Query: 306 GLNCDNIVWMHSFMELPRE--TRDELKVDKMQL 214
W HS +EL + T+ +L+ K+ +
Sbjct: 1215 --------WSHS-LELVQHFYTKRQLEGRKLSI 1238
Score = 33.5 bits (75), Expect(2) = 3e-29
Identities = 18/85 (21%), Positives = 36/85 (42%)
Frame = -2
Query: 1102 SGNQETQDHLFNSSMISIKVWKHFAQMLGIREGTGNIRQRALSWWLTKEKNPVQSMMLQX 923
S ++ +H+ + + +WK A +LG+ +R + L W + N V +++
Sbjct: 951 SKGKDDINHILINGNFAKHIWKIHAAILGVVPANTTLRDQLLHWRNQQVNNEVHKLLIHI 1010
Query: 922 XXXXXXXXXXKERCKSRYENLNMSL 848
K RC +Y N + S+
Sbjct: 1011 LPNVICWNLWKNRCAVKYGNKSSSI 1035
Score = 101 bits (251), Expect(2) = 1e-19
Identities = 43/103 (41%), Positives = 65/103 (63%)
Frame = -3
Query: 1413 WSNFCLPTDGGGIGVRSVQEIADSFSAKLWWNFRT*ESLWIKFMTAKYSIRLHPVARKWN 1234
W N PT GGIGVR ++++ +F WW+FRT SLW +F+ AKY R +P+A+K++
Sbjct: 719 WENMAYPTSEGGIGVRLLEDVCTAFQYMQWWDFRTKNSLWSQFLKAKYCQRANPLAKKYD 778
Query: 1233 YTHSHTWRRLMKIRNKVDYITH*KINRGNSNLWWDNWIGSDKL 1105
S WR L + R KV+ + +I+ G S+ WWDNW+ ++ L
Sbjct: 779 SGDSLVWRYLTRNRLKVESLIKWQIHSGTSSFWWDNWLDNENL 821
Score = 23.9 bits (50), Expect(2) = 1e-19
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -2
Query: 1558 LIKYVLSVIPVHLLSICMP 1502
L+K+VL IP+H L+ P
Sbjct: 670 LVKHVLQSIPIHTLAAISP 688
>ref|XP_004253498.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 308
Score = 112 bits (280), Expect(2) = 3e-29
Identities = 68/216 (31%), Positives = 102/216 (47%)
Frame = -3
Query: 825 YHQTVMVVHKQFKTITPFMEWNKLLEISEHAQIHINTIAVKWNLPDIGVVKLNTDGCSKG 646
Y ++ F I W L+ SE + I V WN P +K+NTDG +
Sbjct: 90 YKDNFKMMKNAFPHINWPAHWTALITTSERCKHEIKVCKVTWNRPPEEWIKINTDGSALT 149
Query: 645 NPGPSGGKDIIRDHRGNMITAYAVYHGNITNNMAEAMALKVGIE*CMNNGINKLEIESDS 466
NPG G IIRD G +I A+A G +NN AE A G+ + G + +E DS
Sbjct: 150 NPGKIGAGGIIRDKDGKLILAFATSLGEGSNNKAETEAALFGLVKALELGFKNIIMELDS 209
Query: 465 KILVDWILKKSKPPWQICTIVEQVQHNLECFHDKTIQHFFRECNRVADSLAN*GLNCDNI 286
+++V WI KKS W + + ++Q + + QH RE N VADSL+ +
Sbjct: 210 QLVVHWINKKSAHHWSVANEIAKIQFLILQTQNFKCQHTLREANWVADSLSKHSHYTTSP 269
Query: 285 VWMHSFMELPRETRDELKVDKMQLPSFRNSIVKKLF 178
+ +LP+ + +VD + +PSFR +K+F
Sbjct: 270 QIYVNSTQLPKAAQAYYRVDLLNMPSFRRKKTRKIF 305
Score = 44.7 bits (104), Expect(2) = 3e-29
Identities = 20/71 (28%), Positives = 32/71 (45%)
Frame = -2
Query: 1081 DHLFNSSMISIKVWKHFAQMLGIREGTGNIRQRALSWWLTKEKNPVQSMMLQXXXXXXXX 902
DH+F++ + VWK FA G++ ++ R WW +N ++LQ
Sbjct: 5 DHIFSTGKFAGTVWKSFAASAGLQHDQTTLQARLEKWWTANPRNEGHQLLLQATPIFICW 64
Query: 901 XXXKERCKSRY 869
K RC S+Y
Sbjct: 65 NLWKNRCASKY 75
>ref|XP_006367184.1| PREDICTED: uncharacterized protein LOC102601483 [Solanum tuberosum]
Length = 2019
Score = 111 bits (277), Expect(2) = 2e-28
Identities = 65/166 (39%), Positives = 90/166 (54%), Gaps = 1/166 (0%)
Frame = -3
Query: 807 VVHKQFKTITPFMEWNKLLEISEHAQIHINTIAVKWNLPDIGVVKLNTDGCSKGNPGPSG 628
++H F I+ + WNK + E+ AV+W P VKLNTDG + NPG G
Sbjct: 1035 LLHTVFPYISWPLRWNKFCNVIENCSQDTKVTAVQWTKPPYRWVKLNTDGSALSNPGSIG 1094
Query: 627 GKDIIRDHRGNMITAYAVYHGNITNNMAEAMALKVGIE*CMNNGINKLEIESDSKILVDW 448
D+IR+H G +I AY+ G TNN AE A GI C++ N++ +E DS++LVDW
Sbjct: 1095 AGDVIRNHLGEIILAYSTPLGTGTNNQAEVEAAIFGIAWCIHMKYNQVILEVDSQLLVDW 1154
Query: 447 ILKKSKPPWQICTIVEQV-QHNLECFHDKTIQHFFRECNRVADSLA 313
PW I + ++Q+ Q + H K I H FRE N VAD L+
Sbjct: 1155 FKNNKLIPWNISSQMQQLHQLATQLDHFKCI-HTFREANFVADVLS 1199
Score = 43.1 bits (100), Expect(2) = 2e-28
Identities = 22/74 (29%), Positives = 31/74 (41%)
Frame = -2
Query: 1090 ETQDHLFNSSMISIKVWKHFAQMLGIREGTGNIRQRALSWWLTKEKNPVQSMMLQXXXXX 911
+T +H NS + VWK+FA LGIR +R + WW N ++L
Sbjct: 941 DTIEHTLNSGDFAKNVWKYFAISLGIRTDFLPLRNMIMRWWSAPHNNEAHKLILHSTPIF 1000
Query: 910 XXXXXXKERCKSRY 869
K RC +Y
Sbjct: 1001 ICWNLWKNRCAVKY 1014
Score = 100 bits (250), Expect = 1e-18
Identities = 40/99 (40%), Positives = 65/99 (65%)
Frame = -3
Query: 1413 WSNFCLPTDGGGIGVRSVQEIADSFSAKLWWNFRT*ESLWIKFMTAKYSIRLHPVARKWN 1234
W N P + GGIG+R+++++ +F K WW FR+ ++LW F+ AKY R +P+++KW+
Sbjct: 408 WKNLSFPYEEGGIGMRNLKDVCIAFQYKQWWCFRSKQTLWGDFLKAKYCQRSNPISKKWD 467
Query: 1233 YTHSHTWRRLMKIRNKVDYITH*KINRGNSNLWWDNWIG 1117
S TW+ LM ++KV+ K+N G+ + WWDNW+G
Sbjct: 468 TGDSLTWKHLMHNKHKVEEHIQWKLNSGSCSFWWDNWLG 506
Score = 47.8 bits (112), Expect(2) = 2e-07
Identities = 26/79 (32%), Positives = 36/79 (45%)
Frame = -2
Query: 1105 RSGNQETQDHLFNSSMISIKVWKHFAQMLGIREGTGNIRQRALSWWLTKEKNPVQSMMLQ 926
RSG +T +H FN + +WK FA GI ++ Q + WW TK N ++LQ
Sbjct: 641 RSG-LDTIEHTFNKGQFATYLWKSFAAAAGIITYHNSLPQLIMQWWSTKHNNAAYRLILQ 699
Query: 925 XXXXXXXXXXXKERCKSRY 869
K RC S+Y
Sbjct: 700 ATPIFICWNLWKNRCASKY 718
Score = 36.2 bits (82), Expect(2) = 2e-07
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = -3
Query: 765 WNKLLEISEHAQIHINTIAVKWNLPDIGVVKLNTDGCSKGNPGPSG 628
W +LL++ E VKW P VK+NTDG + NPG G
Sbjct: 753 WMELLQLGERCTHDTKVTMVKWIKPKKQWVKINTDGSALCNPGRIG 798
>ref|XP_004253499.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 314
Score = 100 bits (250), Expect(3) = 2e-27
Identities = 40/103 (38%), Positives = 65/103 (63%)
Frame = -3
Query: 1413 WSNFCLPTDGGGIGVRSVQEIADSFSAKLWWNFRT*ESLWIKFMTAKYSIRLHPVARKWN 1234
W N P + GIG+R++ ++ SF K WW FRT ++LW F+ AKY R +PV++KW+
Sbjct: 173 WKNLSYPYEEEGIGMRNLSDVCKSFQFKQWWTFRTKQTLWGDFLRAKYCQRSNPVSKKWD 232
Query: 1233 YTHSHTWRRLMKIRNKVDYITH*KINRGNSNLWWDNWIGSDKL 1105
TW++++ R +V+ H +++ GN + WWDNW+G+ L
Sbjct: 233 TGEFLTWKQMLTTRQQVEQHIHWQLHIGNCSFWWDNWLGTGPL 275
Score = 43.9 bits (102), Expect(3) = 2e-27
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = -1
Query: 1502 PKTFFKQIESVFANFFWGQYEGKYKYHWS 1416
PKT KQI+S+ A+FFWG KYHWS
Sbjct: 143 PKTIIKQIQSLIADFFWGWQHNNKKYHWS 171
Score = 26.9 bits (58), Expect(3) = 2e-27
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -2
Query: 1564 MILIKYVLSVIPVHLLSICMP 1502
++L K+VL +P+HLLS P
Sbjct: 122 VVLAKHVLQALPIHLLSAVTP 142
>ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 1035
Score = 109 bits (273), Expect(2) = 2e-27
Identities = 65/211 (30%), Positives = 113/211 (53%), Gaps = 5/211 (2%)
Frame = -3
Query: 834 NNTYHQTVMVVHKQFKTITPFME-----WNKLLEISEHAQIHINTIAVKWNLPDIGVVKL 670
NN Y+Q +++++ P+++ W +++ + ++ + ++ V+W P G V
Sbjct: 622 NNMYYQCQLILYQLVTIKFPWIKGLTYHWPQVVGMLQNYKPPLHYKVVRWRKPSEGWVTC 681
Query: 669 NTDGCSKGNPGPSGGKDIIRDHRGNMITAYAVYHGNITNNMAEAMALKVGIE*CMNNGIN 490
NTDG SKGNP S IRD G+++ A A G TN AEA + ++ C NG+
Sbjct: 682 NTDGASKGNPRMSSYGYCIRDKNGDLLYAEAHNIGETTNMEAEATTVWKALQFCYENGLR 741
Query: 489 KLEIESDSKILVDWILKKSKPPWQICTIVEQVQHNLECFHDKTIQHFFRECNRVADSLAN 310
K+ +E+DS L + I + K PW++ +E++ H + D + H +RE N++AD +AN
Sbjct: 742 KVRLETDSLALQNMITRSWKIPWELVEKLEEI-HEIMQQIDVQVCHVYREVNQLADFIAN 800
Query: 309 *GLNCDNIVWMHSFMELPRETRDELKVDKMQ 217
+N ++ H F +LP + L +DK Q
Sbjct: 801 TTINTEHKKVFHHFHQLPSLGKKLLNIDKHQ 831
Score = 41.6 bits (96), Expect(2) = 2e-27
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = -2
Query: 1105 RSGNQETQDHLFNSSMISIKVWKHFAQMLGIREGTGNIRQRALSWWLTKEKNPVQSMM 932
+ G ET HL ++ I+ K+WK FA GI N++Q WW K N + ++
Sbjct: 538 KEGEMETMTHLLLTAPIAQKLWKQFASYAGIIINGLNLQQLIFKWWDYKASNKLSQIL 595
Score = 90.9 bits (224), Expect(2) = 6e-16
Identities = 42/100 (42%), Positives = 61/100 (61%), Gaps = 1/100 (1%)
Frame = -3
Query: 1419 VCWSNFCLPTDGGGIGVRSVQEIADSFSAKLWWNFR-T*ESLWIKFMTAKYSIRLHPVAR 1243
V W + C P GG+G RS+ + + AKLWWNFR + SLW+K+M KY +LHPV
Sbjct: 303 VAWGDLCYPKTEGGLGFRSLHNMNKALFAKLWWNFRVSTTSLWVKYMWNKYCKKLHPVVA 362
Query: 1242 KWNYTHSHTWRRLMKIRNKVDYITH*KINRGNSNLWWDNW 1123
+ S WR+++ IR +V++ +I GNS+ W+DNW
Sbjct: 363 T-SLGASQVWRKMISIREEVEHDIWWQIKAGNSSFWFDNW 401
Score = 21.6 bits (44), Expect(2) = 6e-16
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -2
Query: 1561 ILIKYVLSVIPVHLLSICMP 1502
ILI VL +PV++LS P
Sbjct: 255 ILINNVLQSMPVYMLSALKP 274
>ref|XP_004244918.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 1010
Score = 118 bits (296), Expect(2) = 5e-27
Identities = 69/225 (30%), Positives = 108/225 (48%)
Frame = -3
Query: 855 CPSYRIINNTYHQTVMVVHKQFKTITPFMEWNKLLEISEHAQIHINTIAVKWNLPDIGVV 676
C + R+ + T+ V F I+ + L+ ++E+ Q + V W P +G+
Sbjct: 782 CSTQRVQYAIFKDTMQAVMVAFPNISRQNNLDMLINLAENCQQQVKVTKVMWEKPSLGIF 841
Query: 675 KLNTDGCSKGNPGPSGGKDIIRDHRGNMITAYAVYHGNITNNMAEAMALKVGIE*CMNNG 496
KLNTDG + N GG I+RDH G +I A+A+ G TNN AE A G+ C +G
Sbjct: 842 KLNTDGSAIHNINKIGGGGILRDHNGKLIYAFAIPFGIGTNNFAEMKAALYGLSWCEQHG 901
Query: 495 INKLEIESDSKILVDWILKKSKPPWQICTIVEQVQHNLECFHDKTIQHFFRECNRVADSL 316
++ +E DS++L WI PW+ + Q+Q + QH FRE N AD L
Sbjct: 902 YKRIILEVDSELLSKWIDNSINIPWRCQPTIYQIQDIVNKMEYFQCQHIFREANGTADLL 961
Query: 315 AN*GLNCDNIVWMHSFMELPRETRDELKVDKMQLPSFRNSIVKKL 181
A D + ++ +L R ++KM + SFR +K++
Sbjct: 962 AKWSHQQDIVQHFYTQQQLIGTIRGNYLLEKMGVQSFRRRKLKRI 1006
Score = 31.2 bits (69), Expect(2) = 5e-27
Identities = 17/70 (24%), Positives = 28/70 (40%)
Frame = -2
Query: 1078 HLFNSSMISIKVWKHFAQMLGIREGTGNIRQRALSWWLTKEKNPVQSMMLQXXXXXXXXX 899
H+ + + +WK A LG+ + N+R L W N VQ ++ Q
Sbjct: 708 HILITGNFAKYIWKIHATRLGVHQDHANLRSLLLHWRNIPVHNQVQKLLYQILPNFICWN 767
Query: 898 XXKERCKSRY 869
K RC ++
Sbjct: 768 LWKNRCAVKH 777
Score = 91.7 bits (226), Expect(3) = 3e-22
Identities = 42/93 (45%), Positives = 57/93 (61%)
Frame = -3
Query: 1395 PTDGGGIGVRSVQEIADSFSAKLWWNFRT*ESLWIKFMTAKYSIRLHPVARKWNYTHSHT 1216
P GGIGVR + ++ SF K WW FRT ++LW KF+ AKY R + VA+K++
Sbjct: 474 PISEGGIGVRLLDDVCRSFQYKHWWEFRTKDTLWSKFLKAKYCQRSNIVAKKFDTGDYVV 533
Query: 1215 WRRLMKIRNKVDYITH*KINRGNSNLWWDNWIG 1117
WR L +IR +V+ I+ GN + WWDNWIG
Sbjct: 534 WRYLTRIRQEVEKYIKWNIHTGNCSFWWDNWIG 566
Score = 38.1 bits (87), Expect(3) = 3e-22
Identities = 17/36 (47%), Positives = 19/36 (52%)
Frame = -1
Query: 1502 PKTFFKQIESVFANFFWGQYEGKYKYHWSVGLIFAY 1395
PKT K I V A+FFWG KYHW+ AY
Sbjct: 438 PKTIIKNINKVIADFFWGSDSVGKKYHWASLETMAY 473
Score = 23.9 bits (50), Expect(3) = 3e-22
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -2
Query: 1558 LIKYVLSVIPVHLLSICMP 1502
L+K+VL IP+H L+ P
Sbjct: 419 LVKHVLQSIPIHTLATISP 437
>ref|XP_004253372.1| PREDICTED: putative ribonuclease H protein At1g65750-like, partial
[Solanum lycopersicum]
Length = 451
Score = 101 bits (252), Expect(3) = 7e-27
Identities = 41/103 (39%), Positives = 62/103 (60%)
Frame = -3
Query: 1413 WSNFCLPTDGGGIGVRSVQEIADSFSAKLWWNFRT*ESLWIKFMTAKYSIRLHPVARKWN 1234
W N P + GGIG+R++ +I SF K WW FRT +LW F+ AKY R +PV++KW+
Sbjct: 173 WKNLSYPYEEGGIGMRNLHDICKSFQFKQWWTFRTKHTLWGDFLKAKYCQRSNPVSKKWD 232
Query: 1233 YTHSHTWRRLMKIRNKVDYITH*KINRGNSNLWWDNWIGSDKL 1105
S W+ ++ R + + ++N GN + WWDNW+G+ L
Sbjct: 233 TGESIAWKHMLATRQQGEQYIQWQLNSGNCSFWWDNWLGTGSL 275
Score = 42.7 bits (99), Expect(3) = 7e-27
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = -1
Query: 1502 PKTFFKQIESVFANFFWGQYEGKYKYHWS 1416
PKT KQI+ + A+FFWG + KYHWS
Sbjct: 143 PKTIIKQIQMLIADFFWGWQNNRRKYHWS 171
Score = 25.0 bits (53), Expect(3) = 7e-27
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -2
Query: 1561 ILIKYVLSVIPVHLLSICMP 1502
+L K+VL +P+HLL+ P
Sbjct: 123 VLSKHVLQALPIHLLTAVTP 142
>ref|XP_004234855.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 440
Score = 107 bits (266), Expect(3) = 7e-27
Identities = 43/103 (41%), Positives = 65/103 (63%)
Frame = -3
Query: 1413 WSNFCLPTDGGGIGVRSVQEIADSFSAKLWWNFRT*ESLWIKFMTAKYSIRLHPVARKWN 1234
W N P + GGIG+R++Q++ SF K WW FRT ++LW +F+ AKY R +PV +KW+
Sbjct: 142 WKNLSYPYEEGGIGMRNLQDVCKSFQFKQWWVFRTKQTLWGEFLRAKYCQRSNPVCKKWD 201
Query: 1233 YTHSHTWRRLMKIRNKVDYITH*KINRGNSNLWWDNWIGSDKL 1105
S TW+ ++ R +V+ H + GN + WWDNW+G+ L
Sbjct: 202 TGESLTWKHMLDTRQQVEQHIHWNLQAGNCSFWWDNWLGTGPL 244
Score = 38.5 bits (88), Expect(3) = 7e-27
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = -1
Query: 1502 PKTFFKQIESVFANFFWGQYEGKYKYHWS 1416
P T +QI+ + A+FFWG + KYHWS
Sbjct: 112 PTTIIRQIQMLIADFFWGWKNDRKKYHWS 140
Score = 23.9 bits (50), Expect(3) = 7e-27
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -2
Query: 1561 ILIKYVLSVIPVHLLSICMP 1502
+L K+VL +P+HLL P
Sbjct: 92 VLSKHVLQALPIHLLLAVTP 111
>ref|XP_004248946.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 622
Score = 105 bits (261), Expect(3) = 3e-26
Identities = 42/103 (40%), Positives = 65/103 (63%)
Frame = -3
Query: 1413 WSNFCLPTDGGGIGVRSVQEIADSFSAKLWWNFRT*ESLWIKFMTAKYSIRLHPVARKWN 1234
W N P + GGIG+R++Q++ SF K WW+FRT ++LW F+ AKY R +PV +KW+
Sbjct: 173 WKNLSYPYEEGGIGMRNLQDVCKSFQFKHWWSFRTKQTLWGDFLRAKYCQRANPVNKKWD 232
Query: 1233 YTHSHTWRRLMKIRNKVDYITH*KINRGNSNLWWDNWIGSDKL 1105
S W+ ++ R +++ H K+ GN + WWDNW+G+ L
Sbjct: 233 TGQSLMWKNMLDTRQQMEQHIHWKLQAGNYSFWWDNWLGTGPL 275
Score = 35.4 bits (80), Expect(3) = 3e-26
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = -1
Query: 1502 PKTFFKQIESVFANFFWGQYEGKYKYHWS 1416
PKT +QI+ + A+FFWG + KYH S
Sbjct: 143 PKTIIRQIQMLIADFFWGWKNDRKKYHRS 171
Score = 26.9 bits (58), Expect(3) = 3e-26
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -2
Query: 1561 ILIKYVLSVIPVHLLSICMP 1502
+L K+VL +P+HLLS +P
Sbjct: 123 VLSKHVLEALPIHLLSAVIP 142
>gb|ABI34321.1| RNase H family protein [Solanum demissum]
Length = 945
Score = 106 bits (265), Expect(2) = 5e-25
Identities = 69/215 (32%), Positives = 107/215 (49%), Gaps = 4/215 (1%)
Frame = -3
Query: 834 NNTYHQTVMVVHKQFKTITPFMEWNKLLEISEHAQIHINTIAVKWNLPDIGVVKLNTDGC 655
N+ + M + F + W LL E + + V WN P+I VK+NTDG
Sbjct: 703 NHVWWNLKMSLRMTFPSFEIGNSWRDLLNKVESLRPYPKWKIVHWNTPNINCVKINTDGS 762
Query: 654 -SKGNPGPSGGKDIIRDHRGNMITAYAVYHGNITNNMAEAMALKVGIE*CMNNGINKLEI 478
S GN G I+RDH MI A+++ +NN+AEA+A + GI C+ G + +
Sbjct: 763 FSSGNAGLGW---IVRDHTRRMIMAFSIPSSCSSNNLAEALAARFGILWCLQQGFHNCYL 819
Query: 477 ESDSKILVDWILKKSKPPWQICTIVE---QVQHNLECFHDKTIQHFFRECNRVADSLAN* 307
E DSK++VD + +I +VE QV + C + H +RE N+VAD+LA
Sbjct: 820 ELDSKLVVDMVRNGQATNLKIKGVVEDIIQVVAKMNC----EVNHCYREANQVADALAKH 875
Query: 306 GLNCDNIVWMHSFMELPRETRDELKVDKMQLPSFR 202
+ + H + ++P+ ++DKMQ+PS R
Sbjct: 876 AVISNEAHMYHDWRDIPKLAVGSYQLDKMQMPSIR 910
Score = 36.6 bits (83), Expect(2) = 5e-25
Identities = 18/74 (24%), Positives = 33/74 (44%)
Frame = -2
Query: 1090 ETQDHLFNSSMISIKVWKHFAQMLGIREGTGNIRQRALSWWLTKEKNPVQSMMLQXXXXX 911
ET +H+F +S ++ +WK F LGI + +WW + N + ++++
Sbjct: 617 ETINHVFLNSDVASYLWKKFGGTLGIDTRASSTINLLKTWWNVQTHNSIHNVIIHTLPIL 676
Query: 910 XXXXXXKERCKSRY 869
K RC +Y
Sbjct: 677 IFWEIWKRRCACKY 690
Score = 58.5 bits (140), Expect = 7e-06
Identities = 31/92 (33%), Positives = 48/92 (52%)
Frame = -3
Query: 1380 GIGVRSVQEIADSFSAKLWWNFRT*ESLWIKFMTAKYSIRLHPVARKWNYTHSHTWRRLM 1201
GIG+R++ I+DS + K R+HPVA+ + SHTW +++
Sbjct: 414 GIGLRNLSPISDSVAYK----------------------RVHPVAKAKSSKQSHTWSKML 451
Query: 1200 KIRNKVDYITH*KINRGNSNLWWDNWIGSDKL 1105
KIR+ V+ I GN ++WWDNW+G+ L
Sbjct: 452 KIRHSVENNILWIIYAGNVSMWWDNWMGNGAL 483
>ref|XP_004253338.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 655
Score = 100 bits (248), Expect(3) = 1e-24
Identities = 44/103 (42%), Positives = 62/103 (60%)
Frame = -3
Query: 1413 WSNFCLPTDGGGIGVRSVQEIADSFSAKLWWNFRT*ESLWIKFMTAKYSIRLHPVARKWN 1234
W N P GGIGVR ++++ +F K WW+FRT +SLW +F+ AKY R +PVA+K++
Sbjct: 173 WENLAYPISEGGIGVRLLEDVCTAFQYKQWWDFRTKKSLWSQFLQAKYCQRANPVAKKYD 232
Query: 1233 YTHSHTWRRLMKIRNKVDYITH*KINRGNSNLWWDNWIGSDKL 1105
S WR L + R KV+ IN G + WWDNW+ + L
Sbjct: 233 TGDSLIWRYLTRNRLKVESFIKWNINSGTCSFWWDNWLDIENL 275
Score = 34.7 bits (78), Expect(3) = 1e-24
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = -1
Query: 1502 PKTFFKQIESVFANFFWGQYEGKYKYHWSVGLIFAY 1395
PKT I+ + A+FFWG + KYHWS AY
Sbjct: 143 PKTTLNCIKKLIADFFWGIDKDGKKYHWSSWENLAY 178
Score = 26.9 bits (58), Expect(3) = 1e-24
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 1564 MILIKYVLSVIPVHLLSICMP 1502
+IL+K+VL IP+H LS P
Sbjct: 122 IILVKHVLQSIPIHTLSAISP 142
Score = 108 bits (270), Expect(2) = 2e-24
Identities = 54/165 (32%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Frame = -3
Query: 846 YRIINNTYHQTVMVVHKQFKTITPFMEWNKLLEISEHAQIHINTIAVKWNLPDIGVVKLN 667
+R+ + + + ++ F +I WN L+ I E+ + V WN P G KLN
Sbjct: 490 HRVKYGIFKEVMQIIKLVFPSIPWQANWNNLVNIIENCSQQYKIVLVSWNKPAFGTYKLN 549
Query: 666 TDGCSKGNPGPSGGKDIIRDHRGNMITAYAVYHGNITNNMAEAMALKVGIE*CMNNGINK 487
TDG + N G +GG I+RD +G ++ A+++ G TNN AE A G++ C +G K
Sbjct: 550 TDGSAIQNSGKTGGGGILRDFQGKIVYAFSIPFGVGTNNFAEIKAALYGMQWCEQHGYKK 609
Query: 486 LEIESDSKILVDWILKKSKPPWQICTIVEQVQ------HNLECFH 370
+E+E DS++L +WI +K PW+ +V+Q+Q +C H
Sbjct: 610 VELEVDSELLFNWIKNTTKIPWRYEDLVQQIQQISMKMEQFQCHH 654
Score = 32.3 bits (72), Expect(2) = 2e-24
Identities = 21/79 (26%), Positives = 30/79 (37%)
Frame = -2
Query: 1105 RSGNQETQDHLFNSSMISIKVWKHFAQMLGIREGTGNIRQRALSWWLTKEKNPVQSMMLQ 926
R G + L N + +WK A LGI N+R + L W K N V +++
Sbjct: 405 RKGKDDINHILINGNFAKY-IWKIHAATLGIIPVNTNLRAQLLHWRNQKVNNEVHKLLIH 463
Query: 925 XXXXXXXXXXXKERCKSRY 869
K RC +Y
Sbjct: 464 ILPNLICWNLWKNRCAVKY 482