BLASTX nr result

ID: Atropa21_contig00031747 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00031747
         (1565 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004239568.1| PREDICTED: putative ribonuclease H protein A...   127   3e-34
ref|XP_004253445.1| PREDICTED: putative ribonuclease H protein A...   130   4e-33
ref|XP_004228797.1| PREDICTED: putative ribonuclease H protein A...   133   3e-32
ref|XP_004253259.1| PREDICTED: putative ribonuclease H protein A...   119   5e-32
ref|XP_004243166.1| PREDICTED: putative ribonuclease H protein A...   122   1e-31
ref|XP_004253442.1| PREDICTED: putative ribonuclease H protein A...   117   1e-30
ref|XP_004242524.1| PREDICTED: uncharacterized protein LOC101258...   133   2e-30
ref|XP_004253275.1| PREDICTED: uncharacterized protein LOC101268...   131   4e-30
ref|XP_004253443.1| PREDICTED: putative ribonuclease H protein A...   114   7e-30
ref|XP_004248595.1| PREDICTED: uncharacterized protein LOC101261...   124   3e-29
ref|XP_004253498.1| PREDICTED: putative ribonuclease H protein A...   112   3e-29
ref|XP_006367184.1| PREDICTED: uncharacterized protein LOC102601...   111   2e-28
ref|XP_004253499.1| PREDICTED: putative ribonuclease H protein A...   100   2e-27
ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein A...   109   2e-27
ref|XP_004244918.1| PREDICTED: putative ribonuclease H protein A...   118   5e-27
ref|XP_004253372.1| PREDICTED: putative ribonuclease H protein A...   101   7e-27
ref|XP_004234855.1| PREDICTED: putative ribonuclease H protein A...   107   7e-27
ref|XP_004248946.1| PREDICTED: putative ribonuclease H protein A...   105   3e-26
gb|ABI34321.1| RNase H family protein [Solanum demissum]              106   5e-25
ref|XP_004253338.1| PREDICTED: putative ribonuclease H protein A...   108   1e-24

>ref|XP_004239568.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 308

 Score =  127 bits (320), Expect(2) = 3e-34
 Identities = 74/222 (33%), Positives = 109/222 (49%)
 Frame = -3

Query: 843 RIINNTYHQTVMVVHKQFKTITPFMEWNKLLEISEHAQIHINTIAVKWNLPDIGVVKLNT 664
           R+    Y  T  ++   F  I     W  L++ SE  +  I    V WN P    +K+NT
Sbjct: 84  RVKYAVYKDTFKMLKIAFPHIKWPASWTALIQTSEKCKHEIKVCMVAWNRPPEQWIKINT 143

Query: 663 DGCSKGNPGPSGGKDIIRDHRGNMITAYAVYHGNITNNMAEAMALKVGIE*CMNNGINKL 484
           DG +  N G  G   I+RD  G M+ A+A   G  +NN AE  A   G+   +  G   +
Sbjct: 144 DGSALTNLGQIGAGGILRDREGKMVLAFATPLGEGSNNKAETAAALFGLSWALELGYRNI 203

Query: 483 EIESDSKILVDWILKKSKPPWQICTIVEQVQHNLECFHDKTIQHFFRECNRVADSLAN*G 304
            IE DS+++V WI KK+ P W +   +E++QH +    +    H FRE N VADSL+   
Sbjct: 204 LIELDSQLVVQWISKKTAPHWSVTKQIERIQHLIMQTQNFKCTHIFREANWVADSLSKHS 263

Query: 303 LNCDNIVWMHSFMELPRETRDELKVDKMQLPSFRNSIVKKLF 178
            N        S  +LP+E +   ++D + +PSFR    KK+F
Sbjct: 264 HNTTAPQVYFSSTQLPKEAQAYYQMDLLNMPSFRRKKTKKIF 305



 Score = 46.2 bits (108), Expect(2) = 3e-34
 Identities = 20/71 (28%), Positives = 32/71 (45%)
 Frame = -2

Query: 1081 DHLFNSSMISIKVWKHFAQMLGIREGTGNIRQRALSWWLTKEKNPVQSMMLQXXXXXXXX 902
            DH FNS   + +VW  FA   G++    +++ R   WW  + +N    ++LQ        
Sbjct: 5    DHTFNSGPFAARVWNFFAASAGLQADHSSLQARVQQWWTARPQNEGHQLLLQATPTFICW 64

Query: 901  XXXKERCKSRY 869
               K RC  +Y
Sbjct: 65   NLWKNRCACKY 75


>ref|XP_004253445.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 338

 Score =  130 bits (327), Expect(2) = 4e-33
 Identities = 74/222 (33%), Positives = 113/222 (50%)
 Frame = -3

Query: 843 RIINNTYHQTVMVVHKQFKTITPFMEWNKLLEISEHAQIHINTIAVKWNLPDIGVVKLNT 664
           R+    Y  T  ++   F  I     W  L++ +E+ +  I    V WN P    +K+NT
Sbjct: 114 RVKYAVYKDTFKMLKMAFPHINWPGSWAALVQKAENCKHEIQVSMVTWNRPSEQWIKINT 173

Query: 663 DGCSKGNPGPSGGKDIIRDHRGNMITAYAVYHGNITNNMAEAMALKVGIE*CMNNGINKL 484
           DG +  NPG +G   I+RD  G M+ A+A   G  TNN AEA A+  G+   +  G   +
Sbjct: 174 DGSALTNPGQTGAGGILRDKEGKMVMAFATPLGEGTNNTAEAEAVLFGLSWALELGHRNI 233

Query: 483 EIESDSKILVDWILKKSKPPWQICTIVEQVQHNLECFHDKTIQHFFRECNRVADSLAN*G 304
           +IE D++++V WI +K  P W +   +E++QH +    +    H FRE N VAD+L+   
Sbjct: 234 QIELDAQLVVKWITRKEVPHWSVINQIERIQHLIMQTQNFMCTHIFREANWVADALSKHS 293

Query: 303 LNCDNIVWMHSFMELPRETRDELKVDKMQLPSFRNSIVKKLF 178
            N        S  +LPRE +   ++D   +PSFR    KK+F
Sbjct: 294 HNIPAPQVYFSNNQLPREAQAYYQMDLRNMPSFRRKKTKKIF 335



 Score = 39.7 bits (91), Expect(2) = 4e-33
 Identities = 19/74 (25%), Positives = 31/74 (41%)
 Frame = -2

Query: 1090 ETQDHLFNSSMISIKVWKHFAQMLGIREGTGNIRQRALSWWLTKEKNPVQSMMLQXXXXX 911
            +T DH FNS   +  VWK F    G++     ++ +   WW  + +N    ++LQ     
Sbjct: 32   DTIDHTFNSGPFAAGVWKAFTAGAGLQADRTPLQAKLRQWWTARPRNEGHQLLLQATPVF 91

Query: 910  XXXXXXKERCKSRY 869
                  K  C  +Y
Sbjct: 92   IVWNLWKNICACKY 105


>ref|XP_004228797.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 389

 Score =  133 bits (334), Expect(2) = 3e-32
 Identities = 73/225 (32%), Positives = 116/225 (51%), Gaps = 3/225 (1%)
 Frame = -3

Query: 846 YRIINNTYHQTVMVVHKQFKTITPFMEWNKLLEISEHAQIHINTIAVKWNLPDIGVVKLN 667
           YR+ +  +   + ++   +  I     W +L  + E  Q H+    V W  P  G+ KLN
Sbjct: 164 YRVESGIFKDIMQIIKAVYPNIPWQSSWERLFNLVEQCQQHLKVTMVNWERPPEGIHKLN 223

Query: 666 TDGCSKGNPGPSGGKDIIRDHRGNMITAYAVYHGNITNNMAEAMALKVGIE*CMNNGINK 487
           TDG +K N G  GG  I+RDH+G +I A+A+  G  TNN AE  A   G++ C  +G  K
Sbjct: 224 TDGSAKHNTGKIGGGGILRDHQGKLIYAFAIPLGFGTNNFAEIQAALHGLQWCQQHGFEK 283

Query: 486 LEIESDSKILVDWILKKSKPPWQICTIVEQVQ---HNLECFHDKTIQHFFRECNRVADSL 316
           + +E DS++L  WI+ KS  PW+    ++Q+Q   + +E F  K   H +RE N  AD L
Sbjct: 284 IILEVDSELLHKWIINKSSVPWRCLHYIQQIQNISNKMEVFQCK---HIYREANGTADLL 340

Query: 315 AN*GLNCDNIVWMHSFMELPRETRDELKVDKMQLPSFRNSIVKKL 181
           A    + D I   ++  +L    +    ++KM +  FR   +K++
Sbjct: 341 AKWSHSMDIIQQFYTSQQLEGVIKGSYILEKMGMQLFRRRKLKRI 385



 Score = 34.3 bits (77), Expect(2) = 3e-32
 Identities = 22/86 (25%), Positives = 35/86 (40%)
 Frame = -2

Query: 1105 RSGNQETQDHLFNSSMISIKVWKHFAQMLGIREGTGNIRQRALSWWLTKEKNPVQSMMLQ 926
            R G  + + H+  +   +  +WK   + LGI     N+R   LSW      N V  ++L 
Sbjct: 79   RKGKDDLK-HILITGNFAKYIWKIHTKRLGIAIVNTNLRSTLLSWRRLTSYNEVHKLILH 137

Query: 925  XXXXXXXXXXXKERCKSRYENLNMSL 848
                       K RC ++Y N   S+
Sbjct: 138  ILPNIICWNLWKNRCSAKYGNKPSSI 163


>ref|XP_004253259.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 668

 Score =  119 bits (299), Expect(2) = 5e-32
 Identities = 70/216 (32%), Positives = 104/216 (48%)
 Frame = -3

Query: 825  YHQTVMVVHKQFKTITPFMEWNKLLEISEHAQIHINTIAVKWNLPDIGVVKLNTDGCSKG 646
            Y  T  ++   F  I     W  L++ +E  +  I      WN P    +K+NTDG +  
Sbjct: 453  YKDTFKMLKSAFPCINWPGNWAALIQTAERCKHEIKVCMTTWNRPPEQWIKINTDGSALI 512

Query: 645  NPGPSGGKDIIRDHRGNMITAYAVYHGNITNNMAEAMALKVGIE*CMNNGINKLEIESDS 466
            N G  G   IIRD  G ++ A+A   G+ TNN AEA A   G+   +  G   + IE DS
Sbjct: 513  NTGHCGAGGIIRDKEGKIVLAFATPLGDGTNNKAEAEAALFGLSWALELGHRNILIELDS 572

Query: 465  KILVDWILKKSKPPWQICTIVEQVQHNLECFHDKTIQHFFRECNRVADSLAN*GLNCDNI 286
            +++V WI KK  P W +   +E++Q  +    +    H FRE N VAD+L+         
Sbjct: 573  QLVVQWISKKEPPHWNVINQIERIQQLIMQTQNFKCNHIFREANWVADALSKHSHTIATP 632

Query: 285  VWMHSFMELPRETRDELKVDKMQLPSFRNSIVKKLF 178
                S  +LPRE +   ++D   +P+FR    KK+F
Sbjct: 633  QVYFSNSQLPREAQAYYQMDLQNMPNFRRKKTKKIF 668



 Score = 47.0 bits (110), Expect(2) = 5e-32
 Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
 Frame = -2

Query: 1081 DHLFNSSMISIKVWKHFAQMLGIREGTGNIRQRALSWWLTKEKNPVQSMMLQXXXXXXXX 902
            +H FNS   + +VW+ F    G++E   +++ R   WW  + +N    ++LQ        
Sbjct: 368  EHTFNSGSFATRVWRAFTTTAGLQEDQSSVQARLRQWWTARLRNASHQLLLQAMPIFIVW 427

Query: 901  XXXKERCKSRY--ENLNMSLIQ 842
               K RC  +Y  ++ N+S ++
Sbjct: 428  NLWKNRCACKYGGKSTNISRVK 449



 Score = 79.0 bits (193), Expect(2) = 2e-17
 Identities = 34/91 (37%), Positives = 55/91 (60%)
 Frame = -3

Query: 1413 WSNFCLPTDGGGIGVRSVQEIADSFSAKLWWNFRT*ESLWIKFMTAKYSIRLHPVARKWN 1234
            W N   P D GGIG+R++ ++  SF  K WW FRT ++LW  F+ AKY  R +P+++KW+
Sbjct: 142  WKNLSYPYDEGGIGMRNLHDVCRSFQFKQWWIFRTKQTLWGDFLKAKYCQRSNPMSKKWD 201

Query: 1233 YTHSHTWRRLMKIRNKVDYITH*KINRGNSN 1141
               S TW+ ++  R  ++     K+  G+S+
Sbjct: 202  TGDSLTWKHMLITRQHMEQHIQWKLQAGDSH 232



 Score = 38.5 bits (88), Expect(2) = 2e-17
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -1

Query: 1502 PKTFFKQIESVFANFFWGQYEGKYKYHWS 1416
            P +   QI+ + A+FFWG +  + KYHWS
Sbjct: 112  PNSIILQIQRIIADFFWGWHNNRKKYHWS 140


>ref|XP_004243166.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 316

 Score =  122 bits (307), Expect(2) = 1e-31
 Identities = 68/216 (31%), Positives = 106/216 (49%)
 Frame = -3

Query: 825 YHQTVMVVHKQFKTITPFMEWNKLLEISEHAQIHINTIAVKWNLPDIGVVKLNTDGCSKG 646
           Y  T  ++   F  I     W  L + SE  +  I    V WN P    +K+NTDG +  
Sbjct: 98  YKDTFKMLQNTFPHIKWPSNWTALYQTSEKCKHDIKVCKVAWNRPPEEWIKINTDGSAIN 157

Query: 645 NPGPSGGKDIIRDHRGNMITAYAVYHGNITNNMAEAMALKVGIE*CMNNGINKLEIESDS 466
           NPG  G   I+RD  G ++ A+A   G  +NN AE  A + G+   ++     + +E DS
Sbjct: 158 NPGKIGAGGILRDTEGRLVLAFATSLGEGSNNQAEMEAAQFGLSWAIDLDYRNIILEVDS 217

Query: 465 KILVDWILKKSKPPWQICTIVEQVQHNLECFHDKTIQHFFRECNRVADSLAN*GLNCDNI 286
           +I+V WI KK+   W +   +E++Q  ++  H    +H FRE N  ADSL+         
Sbjct: 218 QIVVQWITKKTTHHWSVSNQLEKIQQLIQRAHKFKCEHIFREANWTADSLSKHSHGTTGP 277

Query: 285 VWMHSFMELPRETRDELKVDKMQLPSFRNSIVKKLF 178
               +  ++P+E +   ++D M +PSFR    KK+F
Sbjct: 278 QLYFNNNQMPKEAQAYYRMDLMNMPSFRRKKTKKIF 313



 Score = 42.7 bits (99), Expect(2) = 1e-31
 Identities = 19/80 (23%), Positives = 35/80 (43%)
 Frame = -2

Query: 1108 IRSGNQETQDHLFNSSMISIKVWKHFAQMLGIREGTGNIRQRALSWWLTKEKNPVQSMML 929
            ++    ++ +H FNS   + +VW  F+   G++E   +++ R   WW     N    ++L
Sbjct: 4    LKRAGLDSIEHTFNSGQFAGRVWSFFSASAGLKEEQPSLQARLRQWWSATATNAGHQLLL 63

Query: 928  QXXXXXXXXXXXKERCKSRY 869
            Q           K RC  +Y
Sbjct: 64   QATPTFVCWNLWKNRCACKY 83


>ref|XP_004253442.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 775

 Score =  117 bits (293), Expect(2) = 1e-30
 Identities = 68/222 (30%), Positives = 107/222 (48%)
 Frame = -3

Query: 843  RIINNTYHQTVMVVHKQFKTITPFMEWNKLLEISEHAQIHINTIAVKWNLPDIGVVKLNT 664
            R+    Y     ++   F  I     W  L+  SE  +       V WN P    +K+NT
Sbjct: 551  RVKYAVYKDNFKMMKNAFPHIQWPAHWTALIHTSEKCKHDTKVCQVVWNRPPEEWIKINT 610

Query: 663  DGCSKGNPGPSGGKDIIRDHRGNMITAYAVYHGNITNNMAEAMALKVGIE*CMNNGINKL 484
            DG +  NPG  G   IIR+  G ++ A+A   G  +NN AE  A  +G+   +  G   +
Sbjct: 611  DGSALTNPGNIGAGGIIRNKEGKLVMAFATSLGEGSNNKAETEAALIGLVHALELGYRNI 670

Query: 483  EIESDSKILVDWILKKSKPPWQICTIVEQVQHNLECFHDKTIQHFFRECNRVADSLAN*G 304
             +E DS+++V WI KKS   W +   +E++Q+ +    +   QH FRE N VAD+L+   
Sbjct: 671  IMELDSQLIVQWISKKSVHHWSVSNQIERLQYLIMQTQNFKCQHIFREANWVADALSKHS 730

Query: 303  LNCDNIVWMHSFMELPRETRDELKVDKMQLPSFRNSIVKKLF 178
             +  +        +LP+E     ++D + +PSFR    KK+F
Sbjct: 731  HHITSPQLYFDSNQLPKEANAYYRMDLLNMPSFRRRKTKKIF 772



 Score = 44.3 bits (103), Expect(2) = 1e-30
 Identities = 20/71 (28%), Positives = 33/71 (46%)
 Frame = -2

Query: 1081 DHLFNSSMISIKVWKHFAQMLGIREGTGNIRQRALSWWLTKEKNPVQSMMLQXXXXXXXX 902
            +H+FN+   + +VWK FA   G+++    ++ R   WW  K  N    ++LQ        
Sbjct: 472  NHIFNTGNFAGRVWKSFAAGAGLQQDQQTLQARLKQWWTAKSCNAGHQLLLQATPIFICW 531

Query: 901  XXXKERCKSRY 869
               K RC  +Y
Sbjct: 532  NLWKNRCACKY 542



 Score =  104 bits (259), Expect(3) = 9e-28
 Identities = 41/103 (39%), Positives = 65/103 (63%)
 Frame = -3

Query: 1413 WSNFCLPTDGGGIGVRSVQEIADSFSAKLWWNFRT*ESLWIKFMTAKYSIRLHPVARKWN 1234
            W N   P + GG+G+R++ ++  SF  K WW FRT ++LW  F+ AKY  R +PV++KW+
Sbjct: 232  WKNLSYPYEEGGVGMRNLNDVCKSFQFKQWWTFRTKQTLWGDFLRAKYCQRSNPVSKKWD 291

Query: 1233 YTHSHTWRRLMKIRNKVDYITH*KINRGNSNLWWDNWIGSDKL 1105
               S TW+ ++ IR +V+     ++  GN + WWDNW+G+  L
Sbjct: 292  TGQSLTWKHMLAIRQQVEQHIQWQLQAGNCSFWWDNWMGTGPL 334



 Score = 40.0 bits (92), Expect(3) = 9e-28
 Identities = 15/29 (51%), Positives = 18/29 (62%)
 Frame = -1

Query: 1502 PKTFFKQIESVFANFFWGQYEGKYKYHWS 1416
            P T  KQI+ + A+FFWG      KYHWS
Sbjct: 202  PNTIIKQIQMLIADFFWGWQNNSKKYHWS 230



 Score = 28.1 bits (61), Expect(3) = 9e-28
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -2

Query: 1561 ILIKYVLSVIPVHLLSICMP 1502
            +L KYVL  +P+HLLS   P
Sbjct: 182  VLSKYVLQALPIHLLSAVTP 201


>ref|XP_004242524.1| PREDICTED: uncharacterized protein LOC101258077 [Solanum
            lycopersicum]
          Length = 1454

 Score =  133 bits (334), Expect(2) = 2e-30
 Identities = 71/222 (31%), Positives = 115/222 (51%)
 Frame = -3

Query: 846  YRIINNTYHQTVMVVHKQFKTITPFMEWNKLLEISEHAQIHINTIAVKWNLPDIGVVKLN 667
            YR+    +   + V+   F +I     WN L+ I E  + H   + VKWN PD+G  KLN
Sbjct: 1229 YRVQYGIFKNIMQVITIVFPSIPWQTSWNNLINIVEQCKQHYKILIVKWNKPDLGKYKLN 1288

Query: 666  TDGCSKGNPGPSGGKDIIRDHRGNMITAYAVYHGNITNNMAEAMALKVGIE*CMNNGINK 487
            TDG +  N G  GG  I+RD++G +I A+++  G  TNN AE  A   G++ C  +G  K
Sbjct: 1289 TDGSALQNSGKIGGGGILRDNQGKIIYAFSLPFGFGTNNFAEIKAALHGLDWCEQHGYKK 1348

Query: 486  LEIESDSKILVDWILKKSKPPWQICTIVEQVQHNLECFHDKTIQHFFRECNRVADSLAN* 307
            +E+E DSK+L +WI      PW+   +++Q+   +         H +RE N  AD L+  
Sbjct: 1349 IELEVDSKLLCNWINSNINIPWRYEELIQQIHQIIRKMDQFQCHHIYREANCTADLLSKW 1408

Query: 306  GLNCDNIVWMHSFMELPRETRDELKVDKMQLPSFRNSIVKKL 181
              N + +   ++  +L    R    ++KM + +FR   +K++
Sbjct: 1409 SHNLEILQKFYTTRQLKEPIRGSYLLEKMGVQNFRRRKLKRI 1450



 Score = 27.7 bits (60), Expect(2) = 2e-30
 Identities = 15/78 (19%), Positives = 31/78 (39%)
 Frame = -2

Query: 1081 DHLFNSSMISIKVWKHFAQMLGIREGTGNIRQRALSWWLTKEKNPVQSMMLQXXXXXXXX 902
            +H+  +   +  +WK ++  +G+      +R   L W   +  N V  +++         
Sbjct: 1151 NHILINGNFAKYIWKIYSSAVGVLPINTTLRDLLLQWRNQQYTNEVHKLLIHILPNFICW 1210

Query: 901  XXXKERCKSRYENLNMSL 848
               K RC  +Y   N S+
Sbjct: 1211 NLWKNRCAVKYGLKNSSI 1228



 Score =  101 bits (251), Expect(3) = 6e-25
 Identities = 44/98 (44%), Positives = 61/98 (62%)
 Frame = -3

Query: 1413 WSNFCLPTDGGGIGVRSVQEIADSFSAKLWWNFRT*ESLWIKFMTAKYSIRLHPVARKWN 1234
            W+N   PT+ GGIGVR ++++  +F  K WW FRT  SLW KF+ AKY+ R +PVA+K+N
Sbjct: 913  WNNMAFPTNEGGIGVRLIEDMCTAFQYKQWWAFRTNNSLWSKFLKAKYNQRANPVAKKYN 972

Query: 1233 YTHSHTWRRLMKIRNKVDYITH*KINRGNSNLWWDNWI 1120
               S  WR L + R KV+ +    I  G  + WWD W+
Sbjct: 973  TGDSIVWRYLTRNRQKVESLIKWHIQSGTCSFWWDCWL 1010



 Score = 37.7 bits (86), Expect(3) = 6e-25
 Identities = 15/29 (51%), Positives = 18/29 (62%)
 Frame = -1

Query: 1502 PKTFFKQIESVFANFFWGQYEGKYKYHWS 1416
            PKT    I+ V A+FFWG  +   KYHWS
Sbjct: 883  PKTILNSIKKVIADFFWGIEKDGKKYHWS 911



 Score = 23.9 bits (50), Expect(3) = 6e-25
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -2

Query: 1558 LIKYVLSVIPVHLLSICMP 1502
            L+K+VL  +P+H LS   P
Sbjct: 864  LVKHVLQSMPIHTLSAISP 882


>ref|XP_004253275.1| PREDICTED: uncharacterized protein LOC101268853 [Solanum
            lycopersicum]
          Length = 1333

 Score =  131 bits (329), Expect(2) = 4e-30
 Identities = 71/225 (31%), Positives = 118/225 (52%), Gaps = 3/225 (1%)
 Frame = -3

Query: 846  YRIINNTYHQTVMVVHKQFKTITPFMEWNKLLEISEHAQIHINTIAVKWNLPDIGVVKLN 667
            +R+    + + + V+   F +I     WN L+ I EH       + V WN P +G  KLN
Sbjct: 1108 HRVKYGIFKEVMQVIKLVFPSIPWQSNWNNLVNIIEHCSQQYKIVLVSWNKPALGTYKLN 1167

Query: 666  TDGCSKGNPGPSGGKDIIRDHRGNMITAYAVYHGNITNNMAEAMALKVGIE*CMNNGINK 487
            TDG +  N G  GG   +RD +G ++ A+++  G  TNN AE  A   G+E C  +G  K
Sbjct: 1168 TDGSAIQNSGKIGGGGNLRDFQGKIVYAFSIPFGVGTNNFAEIKAALYGMEWCEQHGYKK 1227

Query: 486  LEIESDSKILVDWILKKSKPPWQICTIVEQVQH---NLECFHDKTIQHFFRECNRVADSL 316
            +E+E +S++L +WI   +K PW+   +V+Q+Q     +E FH     H +RE N  AD L
Sbjct: 1228 VELEVNSELLYNWIKNTTKIPWRYEDLVQQIQQISMKMEQFH---CHHIYREANNTADLL 1284

Query: 315  AN*GLNCDNIVWMHSFMELPRETRDELKVDKMQLPSFRNSIVKKL 181
            +    NC+ +   ++  +L    +    ++KM + +FR   +K++
Sbjct: 1285 SKWSNNCEIVQHFYTTRQLEGAIKGSYILEKMGVQNFRRRKLKRI 1329



 Score = 28.9 bits (63), Expect(2) = 4e-30
 Identities = 20/86 (23%), Positives = 31/86 (36%)
 Frame = -2

Query: 1105 RSGNQETQDHLFNSSMISIKVWKHFAQMLGIREGTGNIRQRALSWWLTKEKNPVQSMMLQ 926
            R G  +    L N +     +WK  A  LGI      +R + L W   +  N V  +++ 
Sbjct: 1023 RKGKDDINHILINGNFAKY-IWKIHAATLGIIPVNTTLRAQLLHWRNQQVNNEVHKLLIH 1081

Query: 925  XXXXXXXXXXXKERCKSRYENLNMSL 848
                       K RC  +Y     S+
Sbjct: 1082 ILPNIICWNLWKNRCAVKYGKKRSSI 1107



 Score = 99.8 bits (247), Expect(2) = 8e-20
 Identities = 44/103 (42%), Positives = 61/103 (59%)
 Frame = -3

Query: 1413 WSNFCLPTDGGGIGVRSVQEIADSFSAKLWWNFRT*ESLWIKFMTAKYSIRLHPVARKWN 1234
            W N   PT  GGIGVR ++++  +F  K WW+FRT  SLW +F+ AKY  R +PVA+K++
Sbjct: 791  WENMAYPTSEGGIGVRLLEDVCTAFQYKQWWDFRTKNSLWSQFLQAKYCQRANPVAKKYD 850

Query: 1233 YTHSHTWRRLMKIRNKVDYITH*KINRGNSNLWWDNWIGSDKL 1105
               S  WR L + R KV+      I  G  + WWDNW+  + L
Sbjct: 851  TGDSLIWRYLTRNRLKVESFIKWNITSGTCSFWWDNWLDIENL 893



 Score = 25.8 bits (55), Expect(2) = 8e-20
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -2

Query: 1564 MILIKYVLSVIPVHLLSICMP 1502
            +IL+K+VL  IP+H L+   P
Sbjct: 740  IILVKHVLQSIPIHTLAAISP 760


>ref|XP_004253443.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 775

 Score =  114 bits (284), Expect(2) = 7e-30
 Identities = 65/211 (30%), Positives = 104/211 (49%), Gaps = 4/211 (1%)
 Frame = -3

Query: 798  KQFKTITPFMEW----NKLLEISEHAQIHINTIAVKWNLPDIGVVKLNTDGCSKGNPGPS 631
            K  K   P ++W      L+  SE  +       V WN P    +K+NTDG +  NPG  
Sbjct: 562  KMMKNAFPHIQWPAHWTALIHTSEKCKHDTKVCQVVWNRPPEEWIKINTDGSALTNPGKI 621

Query: 630  GGKDIIRDHRGNMITAYAVYHGNITNNMAEAMALKVGIE*CMNNGINKLEIESDSKILVD 451
            G   IIR+  G ++ A+A   G  T N A+  A  +G+   +  G   + +E DS+++V 
Sbjct: 622  GAGGIIRNKEGKLVMAFATSLGEGTKNKAKTEAALIGLVHALELGYRNIIMELDSQLIVQ 681

Query: 450  WILKKSKPPWQICTIVEQVQHNLECFHDKTIQHFFRECNRVADSLAN*GLNCDNIVWMHS 271
            WI KKS   W +   +E++Q+ +    +   QH F+E N VAD+L+    +  +      
Sbjct: 682  WISKKSVHHWSVSNQIERLQYLIMQTQNFKCQHIFKEANWVADALSKHNHHITSPQLYFD 741

Query: 270  FMELPRETRDELKVDKMQLPSFRNSIVKKLF 178
              +LP+E     ++D + +PSFR    KK+F
Sbjct: 742  SNQLPKEANAYYRMDLLNMPSFRRRKTKKIF 772



 Score = 45.4 bits (106), Expect(2) = 7e-30
 Identities = 21/71 (29%), Positives = 33/71 (46%)
 Frame = -2

Query: 1081 DHLFNSSMISIKVWKHFAQMLGIREGTGNIRQRALSWWLTKEKNPVQSMMLQXXXXXXXX 902
            +H+FN+   + +VWK FA   G++E    ++ R   WW  K  N    ++LQ        
Sbjct: 472  NHIFNTGNFAGRVWKSFAAGAGLQEDQQTLQARLKQWWTAKSCNAGHQLLLQATPIFICW 531

Query: 901  XXXKERCKSRY 869
               K RC  +Y
Sbjct: 532  NLWKNRCACKY 542



 Score = 97.8 bits (242), Expect(3) = 5e-26
 Identities = 39/103 (37%), Positives = 64/103 (62%)
 Frame = -3

Query: 1413 WSNFCLPTDGGGIGVRSVQEIADSFSAKLWWNFRT*ESLWIKFMTAKYSIRLHPVARKWN 1234
            W N   P + GG+G+R++ ++  SF  K WW F+T ++LW  F+ AKY  R +PV++KW+
Sbjct: 232  WKNLSYPYEEGGVGMRNLNDVCKSFQFKQWWTFQTKQTLWGDFLRAKYCQRSNPVSKKWD 291

Query: 1233 YTHSHTWRRLMKIRNKVDYITH*KINRGNSNLWWDNWIGSDKL 1105
               S TW+ ++ IR +V+     ++  GN + WWDN +G+  L
Sbjct: 292  TGQSLTWKHMLAIRQQVEQHIQWQLQAGNCSFWWDNCMGTGPL 334



 Score = 39.3 bits (90), Expect(3) = 5e-26
 Identities = 15/29 (51%), Positives = 17/29 (58%)
 Frame = -1

Query: 1502 PKTFFKQIESVFANFFWGQYEGKYKYHWS 1416
            P T  KQI+   A+FFWG      KYHWS
Sbjct: 202  PNTIIKQIQMFIADFFWGWQNNSKKYHWS 230



 Score = 29.6 bits (65), Expect(3) = 5e-26
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = -2

Query: 1561 ILIKYVLSVIPVHLLSICMP 1502
            +L KYVL  +P+HLLS+  P
Sbjct: 182  VLSKYVLQALPIHLLSVVTP 201


>ref|XP_004248595.1| PREDICTED: uncharacterized protein LOC101261371 [Solanum
            lycopersicum]
          Length = 1246

 Score =  124 bits (310), Expect(2) = 3e-29
 Identities = 69/213 (32%), Positives = 111/213 (52%), Gaps = 2/213 (0%)
 Frame = -3

Query: 846  YRIINNTYHQTVMVVHKQFKTITPFMEWNKLLEISEHAQIHINTIAVKWNLPDIGVVKLN 667
            +R+    +   + V+   F +I     WNKL+ I EH +     + V WN P +G  KLN
Sbjct: 1036 HRVQYGIFKDVMQVIKIVFPSIPWQSSWNKLINIVEHCKQQYKIVLVSWNKPGLGTYKLN 1095

Query: 666  TDGCSKGNPGPSGGKDIIRDHRGNMITAYAVYHGNITNNMAEAMALKVGIE*CMNNGINK 487
            TDG +  N G  GG  I+RDH+G ++ A+++  G  TNN+AE  A   G+E C  +G  +
Sbjct: 1096 TDGSALQNSGKIGGGGILRDHQGKIVYAFSLPFGFGTNNIAEIKAALYGLEWCDQHGYKR 1155

Query: 486  LEIESDSKILVDWILKKSKPPWQICTIVEQVQHNLECFHDKTIQHFFRECNRVADSLAN* 307
            +E+E DS++L +WI  K+  PW    +++Q++            H +RE N  AD L+  
Sbjct: 1156 VELEVDSQLLCNWIKNKTNIPWIYEDLIQQIKQITRKIEQFQCHHIYREANITADLLSK- 1214

Query: 306  GLNCDNIVWMHSFMELPRE--TRDELKVDKMQL 214
                    W HS +EL +   T+ +L+  K+ +
Sbjct: 1215 --------WSHS-LELVQHFYTKRQLEGRKLSI 1238



 Score = 33.5 bits (75), Expect(2) = 3e-29
 Identities = 18/85 (21%), Positives = 36/85 (42%)
 Frame = -2

Query: 1102 SGNQETQDHLFNSSMISIKVWKHFAQMLGIREGTGNIRQRALSWWLTKEKNPVQSMMLQX 923
            S  ++  +H+  +   +  +WK  A +LG+      +R + L W   +  N V  +++  
Sbjct: 951  SKGKDDINHILINGNFAKHIWKIHAAILGVVPANTTLRDQLLHWRNQQVNNEVHKLLIHI 1010

Query: 922  XXXXXXXXXXKERCKSRYENLNMSL 848
                      K RC  +Y N + S+
Sbjct: 1011 LPNVICWNLWKNRCAVKYGNKSSSI 1035



 Score =  101 bits (251), Expect(2) = 1e-19
 Identities = 43/103 (41%), Positives = 65/103 (63%)
 Frame = -3

Query: 1413 WSNFCLPTDGGGIGVRSVQEIADSFSAKLWWNFRT*ESLWIKFMTAKYSIRLHPVARKWN 1234
            W N   PT  GGIGVR ++++  +F    WW+FRT  SLW +F+ AKY  R +P+A+K++
Sbjct: 719  WENMAYPTSEGGIGVRLLEDVCTAFQYMQWWDFRTKNSLWSQFLKAKYCQRANPLAKKYD 778

Query: 1233 YTHSHTWRRLMKIRNKVDYITH*KINRGNSNLWWDNWIGSDKL 1105
               S  WR L + R KV+ +   +I+ G S+ WWDNW+ ++ L
Sbjct: 779  SGDSLVWRYLTRNRLKVESLIKWQIHSGTSSFWWDNWLDNENL 821



 Score = 23.9 bits (50), Expect(2) = 1e-19
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -2

Query: 1558 LIKYVLSVIPVHLLSICMP 1502
            L+K+VL  IP+H L+   P
Sbjct: 670  LVKHVLQSIPIHTLAAISP 688


>ref|XP_004253498.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 308

 Score =  112 bits (280), Expect(2) = 3e-29
 Identities = 68/216 (31%), Positives = 102/216 (47%)
 Frame = -3

Query: 825 YHQTVMVVHKQFKTITPFMEWNKLLEISEHAQIHINTIAVKWNLPDIGVVKLNTDGCSKG 646
           Y     ++   F  I     W  L+  SE  +  I    V WN P    +K+NTDG +  
Sbjct: 90  YKDNFKMMKNAFPHINWPAHWTALITTSERCKHEIKVCKVTWNRPPEEWIKINTDGSALT 149

Query: 645 NPGPSGGKDIIRDHRGNMITAYAVYHGNITNNMAEAMALKVGIE*CMNNGINKLEIESDS 466
           NPG  G   IIRD  G +I A+A   G  +NN AE  A   G+   +  G   + +E DS
Sbjct: 150 NPGKIGAGGIIRDKDGKLILAFATSLGEGSNNKAETEAALFGLVKALELGFKNIIMELDS 209

Query: 465 KILVDWILKKSKPPWQICTIVEQVQHNLECFHDKTIQHFFRECNRVADSLAN*GLNCDNI 286
           +++V WI KKS   W +   + ++Q  +    +   QH  RE N VADSL+       + 
Sbjct: 210 QLVVHWINKKSAHHWSVANEIAKIQFLILQTQNFKCQHTLREANWVADSLSKHSHYTTSP 269

Query: 285 VWMHSFMELPRETRDELKVDKMQLPSFRNSIVKKLF 178
               +  +LP+  +   +VD + +PSFR    +K+F
Sbjct: 270 QIYVNSTQLPKAAQAYYRVDLLNMPSFRRKKTRKIF 305



 Score = 44.7 bits (104), Expect(2) = 3e-29
 Identities = 20/71 (28%), Positives = 32/71 (45%)
 Frame = -2

Query: 1081 DHLFNSSMISIKVWKHFAQMLGIREGTGNIRQRALSWWLTKEKNPVQSMMLQXXXXXXXX 902
            DH+F++   +  VWK FA   G++     ++ R   WW    +N    ++LQ        
Sbjct: 5    DHIFSTGKFAGTVWKSFAASAGLQHDQTTLQARLEKWWTANPRNEGHQLLLQATPIFICW 64

Query: 901  XXXKERCKSRY 869
               K RC S+Y
Sbjct: 65   NLWKNRCASKY 75


>ref|XP_006367184.1| PREDICTED: uncharacterized protein LOC102601483 [Solanum tuberosum]
          Length = 2019

 Score =  111 bits (277), Expect(2) = 2e-28
 Identities = 65/166 (39%), Positives = 90/166 (54%), Gaps = 1/166 (0%)
 Frame = -3

Query: 807  VVHKQFKTITPFMEWNKLLEISEHAQIHINTIAVKWNLPDIGVVKLNTDGCSKGNPGPSG 628
            ++H  F  I+  + WNK   + E+        AV+W  P    VKLNTDG +  NPG  G
Sbjct: 1035 LLHTVFPYISWPLRWNKFCNVIENCSQDTKVTAVQWTKPPYRWVKLNTDGSALSNPGSIG 1094

Query: 627  GKDIIRDHRGNMITAYAVYHGNITNNMAEAMALKVGIE*CMNNGINKLEIESDSKILVDW 448
              D+IR+H G +I AY+   G  TNN AE  A   GI  C++   N++ +E DS++LVDW
Sbjct: 1095 AGDVIRNHLGEIILAYSTPLGTGTNNQAEVEAAIFGIAWCIHMKYNQVILEVDSQLLVDW 1154

Query: 447  ILKKSKPPWQICTIVEQV-QHNLECFHDKTIQHFFRECNRVADSLA 313
                   PW I + ++Q+ Q   +  H K I H FRE N VAD L+
Sbjct: 1155 FKNNKLIPWNISSQMQQLHQLATQLDHFKCI-HTFREANFVADVLS 1199



 Score = 43.1 bits (100), Expect(2) = 2e-28
 Identities = 22/74 (29%), Positives = 31/74 (41%)
 Frame = -2

Query: 1090 ETQDHLFNSSMISIKVWKHFAQMLGIREGTGNIRQRALSWWLTKEKNPVQSMMLQXXXXX 911
            +T +H  NS   +  VWK+FA  LGIR     +R   + WW     N    ++L      
Sbjct: 941  DTIEHTLNSGDFAKNVWKYFAISLGIRTDFLPLRNMIMRWWSAPHNNEAHKLILHSTPIF 1000

Query: 910  XXXXXXKERCKSRY 869
                  K RC  +Y
Sbjct: 1001 ICWNLWKNRCAVKY 1014



 Score =  100 bits (250), Expect = 1e-18
 Identities = 40/99 (40%), Positives = 65/99 (65%)
 Frame = -3

Query: 1413 WSNFCLPTDGGGIGVRSVQEIADSFSAKLWWNFRT*ESLWIKFMTAKYSIRLHPVARKWN 1234
            W N   P + GGIG+R+++++  +F  K WW FR+ ++LW  F+ AKY  R +P+++KW+
Sbjct: 408  WKNLSFPYEEGGIGMRNLKDVCIAFQYKQWWCFRSKQTLWGDFLKAKYCQRSNPISKKWD 467

Query: 1233 YTHSHTWRRLMKIRNKVDYITH*KINRGNSNLWWDNWIG 1117
               S TW+ LM  ++KV+     K+N G+ + WWDNW+G
Sbjct: 468  TGDSLTWKHLMHNKHKVEEHIQWKLNSGSCSFWWDNWLG 506



 Score = 47.8 bits (112), Expect(2) = 2e-07
 Identities = 26/79 (32%), Positives = 36/79 (45%)
 Frame = -2

Query: 1105 RSGNQETQDHLFNSSMISIKVWKHFAQMLGIREGTGNIRQRALSWWLTKEKNPVQSMMLQ 926
            RSG  +T +H FN    +  +WK FA   GI     ++ Q  + WW TK  N    ++LQ
Sbjct: 641  RSG-LDTIEHTFNKGQFATYLWKSFAAAAGIITYHNSLPQLIMQWWSTKHNNAAYRLILQ 699

Query: 925  XXXXXXXXXXXKERCKSRY 869
                       K RC S+Y
Sbjct: 700  ATPIFICWNLWKNRCASKY 718



 Score = 36.2 bits (82), Expect(2) = 2e-07
 Identities = 18/46 (39%), Positives = 23/46 (50%)
 Frame = -3

Query: 765 WNKLLEISEHAQIHINTIAVKWNLPDIGVVKLNTDGCSKGNPGPSG 628
           W +LL++ E          VKW  P    VK+NTDG +  NPG  G
Sbjct: 753 WMELLQLGERCTHDTKVTMVKWIKPKKQWVKINTDGSALCNPGRIG 798


>ref|XP_004253499.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 314

 Score =  100 bits (250), Expect(3) = 2e-27
 Identities = 40/103 (38%), Positives = 65/103 (63%)
 Frame = -3

Query: 1413 WSNFCLPTDGGGIGVRSVQEIADSFSAKLWWNFRT*ESLWIKFMTAKYSIRLHPVARKWN 1234
            W N   P +  GIG+R++ ++  SF  K WW FRT ++LW  F+ AKY  R +PV++KW+
Sbjct: 173  WKNLSYPYEEEGIGMRNLSDVCKSFQFKQWWTFRTKQTLWGDFLRAKYCQRSNPVSKKWD 232

Query: 1233 YTHSHTWRRLMKIRNKVDYITH*KINRGNSNLWWDNWIGSDKL 1105
                 TW++++  R +V+   H +++ GN + WWDNW+G+  L
Sbjct: 233  TGEFLTWKQMLTTRQQVEQHIHWQLHIGNCSFWWDNWLGTGPL 275



 Score = 43.9 bits (102), Expect(3) = 2e-27
 Identities = 17/29 (58%), Positives = 20/29 (68%)
 Frame = -1

Query: 1502 PKTFFKQIESVFANFFWGQYEGKYKYHWS 1416
            PKT  KQI+S+ A+FFWG      KYHWS
Sbjct: 143  PKTIIKQIQSLIADFFWGWQHNNKKYHWS 171



 Score = 26.9 bits (58), Expect(3) = 2e-27
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -2

Query: 1564 MILIKYVLSVIPVHLLSICMP 1502
            ++L K+VL  +P+HLLS   P
Sbjct: 122  VVLAKHVLQALPIHLLSAVTP 142


>ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            tuberosum]
          Length = 1035

 Score =  109 bits (273), Expect(2) = 2e-27
 Identities = 65/211 (30%), Positives = 113/211 (53%), Gaps = 5/211 (2%)
 Frame = -3

Query: 834  NNTYHQTVMVVHKQFKTITPFME-----WNKLLEISEHAQIHINTIAVKWNLPDIGVVKL 670
            NN Y+Q  +++++      P+++     W +++ + ++ +  ++   V+W  P  G V  
Sbjct: 622  NNMYYQCQLILYQLVTIKFPWIKGLTYHWPQVVGMLQNYKPPLHYKVVRWRKPSEGWVTC 681

Query: 669  NTDGCSKGNPGPSGGKDIIRDHRGNMITAYAVYHGNITNNMAEAMALKVGIE*CMNNGIN 490
            NTDG SKGNP  S     IRD  G+++ A A   G  TN  AEA  +   ++ C  NG+ 
Sbjct: 682  NTDGASKGNPRMSSYGYCIRDKNGDLLYAEAHNIGETTNMEAEATTVWKALQFCYENGLR 741

Query: 489  KLEIESDSKILVDWILKKSKPPWQICTIVEQVQHNLECFHDKTIQHFFRECNRVADSLAN 310
            K+ +E+DS  L + I +  K PW++   +E++ H +    D  + H +RE N++AD +AN
Sbjct: 742  KVRLETDSLALQNMITRSWKIPWELVEKLEEI-HEIMQQIDVQVCHVYREVNQLADFIAN 800

Query: 309  *GLNCDNIVWMHSFMELPRETRDELKVDKMQ 217
              +N ++    H F +LP   +  L +DK Q
Sbjct: 801  TTINTEHKKVFHHFHQLPSLGKKLLNIDKHQ 831



 Score = 41.6 bits (96), Expect(2) = 2e-27
 Identities = 19/58 (32%), Positives = 29/58 (50%)
 Frame = -2

Query: 1105 RSGNQETQDHLFNSSMISIKVWKHFAQMLGIREGTGNIRQRALSWWLTKEKNPVQSMM 932
            + G  ET  HL  ++ I+ K+WK FA   GI     N++Q    WW  K  N +  ++
Sbjct: 538  KEGEMETMTHLLLTAPIAQKLWKQFASYAGIIINGLNLQQLIFKWWDYKASNKLSQIL 595



 Score = 90.9 bits (224), Expect(2) = 6e-16
 Identities = 42/100 (42%), Positives = 61/100 (61%), Gaps = 1/100 (1%)
 Frame = -3

Query: 1419 VCWSNFCLPTDGGGIGVRSVQEIADSFSAKLWWNFR-T*ESLWIKFMTAKYSIRLHPVAR 1243
            V W + C P   GG+G RS+  +  +  AKLWWNFR +  SLW+K+M  KY  +LHPV  
Sbjct: 303  VAWGDLCYPKTEGGLGFRSLHNMNKALFAKLWWNFRVSTTSLWVKYMWNKYCKKLHPVVA 362

Query: 1242 KWNYTHSHTWRRLMKIRNKVDYITH*KINRGNSNLWWDNW 1123
              +   S  WR+++ IR +V++    +I  GNS+ W+DNW
Sbjct: 363  T-SLGASQVWRKMISIREEVEHDIWWQIKAGNSSFWFDNW 401



 Score = 21.6 bits (44), Expect(2) = 6e-16
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -2

Query: 1561 ILIKYVLSVIPVHLLSICMP 1502
            ILI  VL  +PV++LS   P
Sbjct: 255  ILINNVLQSMPVYMLSALKP 274


>ref|XP_004244918.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 1010

 Score =  118 bits (296), Expect(2) = 5e-27
 Identities = 69/225 (30%), Positives = 108/225 (48%)
 Frame = -3

Query: 855  CPSYRIINNTYHQTVMVVHKQFKTITPFMEWNKLLEISEHAQIHINTIAVKWNLPDIGVV 676
            C + R+    +  T+  V   F  I+     + L+ ++E+ Q  +    V W  P +G+ 
Sbjct: 782  CSTQRVQYAIFKDTMQAVMVAFPNISRQNNLDMLINLAENCQQQVKVTKVMWEKPSLGIF 841

Query: 675  KLNTDGCSKGNPGPSGGKDIIRDHRGNMITAYAVYHGNITNNMAEAMALKVGIE*CMNNG 496
            KLNTDG +  N    GG  I+RDH G +I A+A+  G  TNN AE  A   G+  C  +G
Sbjct: 842  KLNTDGSAIHNINKIGGGGILRDHNGKLIYAFAIPFGIGTNNFAEMKAALYGLSWCEQHG 901

Query: 495  INKLEIESDSKILVDWILKKSKPPWQICTIVEQVQHNLECFHDKTIQHFFRECNRVADSL 316
              ++ +E DS++L  WI      PW+    + Q+Q  +        QH FRE N  AD L
Sbjct: 902  YKRIILEVDSELLSKWIDNSINIPWRCQPTIYQIQDIVNKMEYFQCQHIFREANGTADLL 961

Query: 315  AN*GLNCDNIVWMHSFMELPRETRDELKVDKMQLPSFRNSIVKKL 181
            A      D +   ++  +L    R    ++KM + SFR   +K++
Sbjct: 962  AKWSHQQDIVQHFYTQQQLIGTIRGNYLLEKMGVQSFRRRKLKRI 1006



 Score = 31.2 bits (69), Expect(2) = 5e-27
 Identities = 17/70 (24%), Positives = 28/70 (40%)
 Frame = -2

Query: 1078 HLFNSSMISIKVWKHFAQMLGIREGTGNIRQRALSWWLTKEKNPVQSMMLQXXXXXXXXX 899
            H+  +   +  +WK  A  LG+ +   N+R   L W      N VQ ++ Q         
Sbjct: 708  HILITGNFAKYIWKIHATRLGVHQDHANLRSLLLHWRNIPVHNQVQKLLYQILPNFICWN 767

Query: 898  XXKERCKSRY 869
              K RC  ++
Sbjct: 768  LWKNRCAVKH 777



 Score = 91.7 bits (226), Expect(3) = 3e-22
 Identities = 42/93 (45%), Positives = 57/93 (61%)
 Frame = -3

Query: 1395 PTDGGGIGVRSVQEIADSFSAKLWWNFRT*ESLWIKFMTAKYSIRLHPVARKWNYTHSHT 1216
            P   GGIGVR + ++  SF  K WW FRT ++LW KF+ AKY  R + VA+K++      
Sbjct: 474  PISEGGIGVRLLDDVCRSFQYKHWWEFRTKDTLWSKFLKAKYCQRSNIVAKKFDTGDYVV 533

Query: 1215 WRRLMKIRNKVDYITH*KINRGNSNLWWDNWIG 1117
            WR L +IR +V+      I+ GN + WWDNWIG
Sbjct: 534  WRYLTRIRQEVEKYIKWNIHTGNCSFWWDNWIG 566



 Score = 38.1 bits (87), Expect(3) = 3e-22
 Identities = 17/36 (47%), Positives = 19/36 (52%)
 Frame = -1

Query: 1502 PKTFFKQIESVFANFFWGQYEGKYKYHWSVGLIFAY 1395
            PKT  K I  V A+FFWG      KYHW+     AY
Sbjct: 438  PKTIIKNINKVIADFFWGSDSVGKKYHWASLETMAY 473



 Score = 23.9 bits (50), Expect(3) = 3e-22
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -2

Query: 1558 LIKYVLSVIPVHLLSICMP 1502
            L+K+VL  IP+H L+   P
Sbjct: 419  LVKHVLQSIPIHTLATISP 437


>ref|XP_004253372.1| PREDICTED: putative ribonuclease H protein At1g65750-like, partial
            [Solanum lycopersicum]
          Length = 451

 Score =  101 bits (252), Expect(3) = 7e-27
 Identities = 41/103 (39%), Positives = 62/103 (60%)
 Frame = -3

Query: 1413 WSNFCLPTDGGGIGVRSVQEIADSFSAKLWWNFRT*ESLWIKFMTAKYSIRLHPVARKWN 1234
            W N   P + GGIG+R++ +I  SF  K WW FRT  +LW  F+ AKY  R +PV++KW+
Sbjct: 173  WKNLSYPYEEGGIGMRNLHDICKSFQFKQWWTFRTKHTLWGDFLKAKYCQRSNPVSKKWD 232

Query: 1233 YTHSHTWRRLMKIRNKVDYITH*KINRGNSNLWWDNWIGSDKL 1105
               S  W+ ++  R + +     ++N GN + WWDNW+G+  L
Sbjct: 233  TGESIAWKHMLATRQQGEQYIQWQLNSGNCSFWWDNWLGTGSL 275



 Score = 42.7 bits (99), Expect(3) = 7e-27
 Identities = 16/29 (55%), Positives = 20/29 (68%)
 Frame = -1

Query: 1502 PKTFFKQIESVFANFFWGQYEGKYKYHWS 1416
            PKT  KQI+ + A+FFWG    + KYHWS
Sbjct: 143  PKTIIKQIQMLIADFFWGWQNNRRKYHWS 171



 Score = 25.0 bits (53), Expect(3) = 7e-27
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -2

Query: 1561 ILIKYVLSVIPVHLLSICMP 1502
            +L K+VL  +P+HLL+   P
Sbjct: 123  VLSKHVLQALPIHLLTAVTP 142


>ref|XP_004234855.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 440

 Score =  107 bits (266), Expect(3) = 7e-27
 Identities = 43/103 (41%), Positives = 65/103 (63%)
 Frame = -3

Query: 1413 WSNFCLPTDGGGIGVRSVQEIADSFSAKLWWNFRT*ESLWIKFMTAKYSIRLHPVARKWN 1234
            W N   P + GGIG+R++Q++  SF  K WW FRT ++LW +F+ AKY  R +PV +KW+
Sbjct: 142  WKNLSYPYEEGGIGMRNLQDVCKSFQFKQWWVFRTKQTLWGEFLRAKYCQRSNPVCKKWD 201

Query: 1233 YTHSHTWRRLMKIRNKVDYITH*KINRGNSNLWWDNWIGSDKL 1105
               S TW+ ++  R +V+   H  +  GN + WWDNW+G+  L
Sbjct: 202  TGESLTWKHMLDTRQQVEQHIHWNLQAGNCSFWWDNWLGTGPL 244



 Score = 38.5 bits (88), Expect(3) = 7e-27
 Identities = 14/29 (48%), Positives = 19/29 (65%)
 Frame = -1

Query: 1502 PKTFFKQIESVFANFFWGQYEGKYKYHWS 1416
            P T  +QI+ + A+FFWG    + KYHWS
Sbjct: 112  PTTIIRQIQMLIADFFWGWKNDRKKYHWS 140



 Score = 23.9 bits (50), Expect(3) = 7e-27
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 1561 ILIKYVLSVIPVHLLSICMP 1502
            +L K+VL  +P+HLL    P
Sbjct: 92   VLSKHVLQALPIHLLLAVTP 111


>ref|XP_004248946.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 622

 Score =  105 bits (261), Expect(3) = 3e-26
 Identities = 42/103 (40%), Positives = 65/103 (63%)
 Frame = -3

Query: 1413 WSNFCLPTDGGGIGVRSVQEIADSFSAKLWWNFRT*ESLWIKFMTAKYSIRLHPVARKWN 1234
            W N   P + GGIG+R++Q++  SF  K WW+FRT ++LW  F+ AKY  R +PV +KW+
Sbjct: 173  WKNLSYPYEEGGIGMRNLQDVCKSFQFKHWWSFRTKQTLWGDFLRAKYCQRANPVNKKWD 232

Query: 1233 YTHSHTWRRLMKIRNKVDYITH*KINRGNSNLWWDNWIGSDKL 1105
               S  W+ ++  R +++   H K+  GN + WWDNW+G+  L
Sbjct: 233  TGQSLMWKNMLDTRQQMEQHIHWKLQAGNYSFWWDNWLGTGPL 275



 Score = 35.4 bits (80), Expect(3) = 3e-26
 Identities = 14/29 (48%), Positives = 19/29 (65%)
 Frame = -1

Query: 1502 PKTFFKQIESVFANFFWGQYEGKYKYHWS 1416
            PKT  +QI+ + A+FFWG    + KYH S
Sbjct: 143  PKTIIRQIQMLIADFFWGWKNDRKKYHRS 171



 Score = 26.9 bits (58), Expect(3) = 3e-26
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = -2

Query: 1561 ILIKYVLSVIPVHLLSICMP 1502
            +L K+VL  +P+HLLS  +P
Sbjct: 123  VLSKHVLEALPIHLLSAVIP 142


>gb|ABI34321.1| RNase H family protein [Solanum demissum]
          Length = 945

 Score =  106 bits (265), Expect(2) = 5e-25
 Identities = 69/215 (32%), Positives = 107/215 (49%), Gaps = 4/215 (1%)
 Frame = -3

Query: 834  NNTYHQTVMVVHKQFKTITPFMEWNKLLEISEHAQIHINTIAVKWNLPDIGVVKLNTDGC 655
            N+ +    M +   F +      W  LL   E  + +     V WN P+I  VK+NTDG 
Sbjct: 703  NHVWWNLKMSLRMTFPSFEIGNSWRDLLNKVESLRPYPKWKIVHWNTPNINCVKINTDGS 762

Query: 654  -SKGNPGPSGGKDIIRDHRGNMITAYAVYHGNITNNMAEAMALKVGIE*CMNNGINKLEI 478
             S GN G      I+RDH   MI A+++     +NN+AEA+A + GI  C+  G +   +
Sbjct: 763  FSSGNAGLGW---IVRDHTRRMIMAFSIPSSCSSNNLAEALAARFGILWCLQQGFHNCYL 819

Query: 477  ESDSKILVDWILKKSKPPWQICTIVE---QVQHNLECFHDKTIQHFFRECNRVADSLAN* 307
            E DSK++VD +        +I  +VE   QV   + C     + H +RE N+VAD+LA  
Sbjct: 820  ELDSKLVVDMVRNGQATNLKIKGVVEDIIQVVAKMNC----EVNHCYREANQVADALAKH 875

Query: 306  GLNCDNIVWMHSFMELPRETRDELKVDKMQLPSFR 202
             +  +     H + ++P+      ++DKMQ+PS R
Sbjct: 876  AVISNEAHMYHDWRDIPKLAVGSYQLDKMQMPSIR 910



 Score = 36.6 bits (83), Expect(2) = 5e-25
 Identities = 18/74 (24%), Positives = 33/74 (44%)
 Frame = -2

Query: 1090 ETQDHLFNSSMISIKVWKHFAQMLGIREGTGNIRQRALSWWLTKEKNPVQSMMLQXXXXX 911
            ET +H+F +S ++  +WK F   LGI     +      +WW  +  N + ++++      
Sbjct: 617  ETINHVFLNSDVASYLWKKFGGTLGIDTRASSTINLLKTWWNVQTHNSIHNVIIHTLPIL 676

Query: 910  XXXXXXKERCKSRY 869
                  K RC  +Y
Sbjct: 677  IFWEIWKRRCACKY 690



 Score = 58.5 bits (140), Expect = 7e-06
 Identities = 31/92 (33%), Positives = 48/92 (52%)
 Frame = -3

Query: 1380 GIGVRSVQEIADSFSAKLWWNFRT*ESLWIKFMTAKYSIRLHPVARKWNYTHSHTWRRLM 1201
            GIG+R++  I+DS + K                      R+HPVA+  +   SHTW +++
Sbjct: 414  GIGLRNLSPISDSVAYK----------------------RVHPVAKAKSSKQSHTWSKML 451

Query: 1200 KIRNKVDYITH*KINRGNSNLWWDNWIGSDKL 1105
            KIR+ V+      I  GN ++WWDNW+G+  L
Sbjct: 452  KIRHSVENNILWIIYAGNVSMWWDNWMGNGAL 483


>ref|XP_004253338.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 655

 Score =  100 bits (248), Expect(3) = 1e-24
 Identities = 44/103 (42%), Positives = 62/103 (60%)
 Frame = -3

Query: 1413 WSNFCLPTDGGGIGVRSVQEIADSFSAKLWWNFRT*ESLWIKFMTAKYSIRLHPVARKWN 1234
            W N   P   GGIGVR ++++  +F  K WW+FRT +SLW +F+ AKY  R +PVA+K++
Sbjct: 173  WENLAYPISEGGIGVRLLEDVCTAFQYKQWWDFRTKKSLWSQFLQAKYCQRANPVAKKYD 232

Query: 1233 YTHSHTWRRLMKIRNKVDYITH*KINRGNSNLWWDNWIGSDKL 1105
               S  WR L + R KV+      IN G  + WWDNW+  + L
Sbjct: 233  TGDSLIWRYLTRNRLKVESFIKWNINSGTCSFWWDNWLDIENL 275



 Score = 34.7 bits (78), Expect(3) = 1e-24
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = -1

Query: 1502 PKTFFKQIESVFANFFWGQYEGKYKYHWSVGLIFAY 1395
            PKT    I+ + A+FFWG  +   KYHWS     AY
Sbjct: 143  PKTTLNCIKKLIADFFWGIDKDGKKYHWSSWENLAY 178



 Score = 26.9 bits (58), Expect(3) = 1e-24
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -2

Query: 1564 MILIKYVLSVIPVHLLSICMP 1502
            +IL+K+VL  IP+H LS   P
Sbjct: 122  IILVKHVLQSIPIHTLSAISP 142



 Score =  108 bits (270), Expect(2) = 2e-24
 Identities = 54/165 (32%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
 Frame = -3

Query: 846 YRIINNTYHQTVMVVHKQFKTITPFMEWNKLLEISEHAQIHINTIAVKWNLPDIGVVKLN 667
           +R+    + + + ++   F +I     WN L+ I E+       + V WN P  G  KLN
Sbjct: 490 HRVKYGIFKEVMQIIKLVFPSIPWQANWNNLVNIIENCSQQYKIVLVSWNKPAFGTYKLN 549

Query: 666 TDGCSKGNPGPSGGKDIIRDHRGNMITAYAVYHGNITNNMAEAMALKVGIE*CMNNGINK 487
           TDG +  N G +GG  I+RD +G ++ A+++  G  TNN AE  A   G++ C  +G  K
Sbjct: 550 TDGSAIQNSGKTGGGGILRDFQGKIVYAFSIPFGVGTNNFAEIKAALYGMQWCEQHGYKK 609

Query: 486 LEIESDSKILVDWILKKSKPPWQICTIVEQVQ------HNLECFH 370
           +E+E DS++L +WI   +K PW+   +V+Q+Q         +C H
Sbjct: 610 VELEVDSELLFNWIKNTTKIPWRYEDLVQQIQQISMKMEQFQCHH 654



 Score = 32.3 bits (72), Expect(2) = 2e-24
 Identities = 21/79 (26%), Positives = 30/79 (37%)
 Frame = -2

Query: 1105 RSGNQETQDHLFNSSMISIKVWKHFAQMLGIREGTGNIRQRALSWWLTKEKNPVQSMMLQ 926
            R G  +    L N +     +WK  A  LGI     N+R + L W   K  N V  +++ 
Sbjct: 405  RKGKDDINHILINGNFAKY-IWKIHAATLGIIPVNTNLRAQLLHWRNQKVNNEVHKLLIH 463

Query: 925  XXXXXXXXXXXKERCKSRY 869
                       K RC  +Y
Sbjct: 464  ILPNLICWNLWKNRCAVKY 482


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