BLASTX nr result

ID: Atropa21_contig00031544 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00031544
         (541 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004245924.1| PREDICTED: nucleolar protein 12-like [Solanu...   162   4e-38
ref|XP_006352880.1| PREDICTED: nucleolar protein 12-like [Solanu...   160   2e-37
gb|EMJ11061.1| hypothetical protein PRUPE_ppa003774mg [Prunus pe...    93   3e-17
ref|NP_001267538.1| uncharacterized LOC101206555 [Cucumis sativu...    92   1e-16
ref|XP_004300414.1| PREDICTED: uncharacterized protein LOC101311...    82   8e-14
ref|XP_003612864.1| RNA-binding protein [Medicago truncatula] gi...    80   2e-13
gb|EPS65135.1| hypothetical protein M569_09644, partial [Genlise...    78   2e-12
gb|EXB66545.1| RNA-binding protein 34 [Morus notabilis]                77   3e-12
ref|XP_003533438.1| PREDICTED: nucleolar protein 12-like [Glycin...    75   8e-12
ref|NP_199496.1| RNA recognition motif-containing protein [Arabi...    75   1e-11
ref|XP_006280324.1| hypothetical protein CARUB_v10026247mg [Caps...    74   2e-11
gb|ESW30281.1| hypothetical protein PHAVU_002G139900g [Phaseolus...    74   3e-11
ref|XP_003517031.1| PREDICTED: nucleolar protein 12-like [Glycin...    73   4e-11
gb|AAM63703.1| unknown [Arabidopsis thaliana]                          73   5e-11
ref|XP_006398378.1| hypothetical protein EUTSA_v10000858mg [Eutr...    72   6e-11
ref|XP_004512514.1| PREDICTED: nucleolar protein 12-like [Cicer ...    71   2e-10
ref|XP_002865157.1| RNA recognition motif-containing protein [Ar...    71   2e-10
ref|XP_002527654.1| RNA binding protein, putative [Ricinus commu...    70   4e-10
ref|XP_006445702.1| hypothetical protein CICLE_v10014807mg [Citr...    69   7e-10
ref|XP_002326533.1| predicted protein [Populus trichocarpa] gi|5...    68   1e-09

>ref|XP_004245924.1| PREDICTED: nucleolar protein 12-like [Solanum lycopersicum]
          Length = 565

 Score =  162 bits (411), Expect = 4e-38
 Identities = 99/190 (52%), Positives = 112/190 (58%), Gaps = 18/190 (9%)
 Frame = -1

Query: 517 LSGVDESNGVVFDYVKKKGKKVILGTEYVGEEANVDKDGKSKRVSLSGVEESNGVVFDSL 338
           +SG ++S        KKK KKV L +  V EE N ++ GKSKRV+LSGVEESNGVV DS 
Sbjct: 78  VSGNNDSGSAELKKRKKKDKKVNLDSGSVAEEVNEEEGGKSKRVALSGVEESNGVVSDSG 137

Query: 337 XXXXXXKVILGTESIGXXXXXXXXXXXXXXXXXXXXE------------------YEAKK 212
                  VILG ES+G                                       YEAK+
Sbjct: 138 RKKKAKNVILGLESVGEGVKESNDGVSNSGNLEKSGLESKKDKKKKRKRDEIEAEYEAKR 197

Query: 211 YGVVDMDEVEKGIGEMVVGEKRKKMDNPEDMMVTNEGFDDESKLLRTIFVGNLDXXXXXX 32
           YGVV +++VEKGIGEMVVGEKRKKMDNPEDMMV+NEGFDDESKLLRTIFVGNL       
Sbjct: 198 YGVVAVEDVEKGIGEMVVGEKRKKMDNPEDMMVSNEGFDDESKLLRTIFVGNLPLKIKKK 257

Query: 31  XXXKEFGSFG 2
              KEFGSFG
Sbjct: 258 ALLKEFGSFG 267


>ref|XP_006352880.1| PREDICTED: nucleolar protein 12-like [Solanum tuberosum]
          Length = 565

 Score =  160 bits (404), Expect = 2e-37
 Identities = 98/175 (56%), Positives = 106/175 (60%), Gaps = 18/175 (10%)
 Frame = -1

Query: 472 KKKGKKVILGTEYVGEEANVDKDGKSKRVSLSGVEESNGVVFDSLXXXXXXKVILGTESI 293
           KKK KKV L +  V EE N ++  KSKRV+LSGVEESNGVV DS       KVILG ES+
Sbjct: 93  KKKDKKVNLDSGSVAEEGNEEEGEKSKRVALSGVEESNGVVSDSGRKKKDKKVILGLESV 152

Query: 292 GXXXXXXXXXXXXXXXXXXXXE------------------YEAKKYGVVDMDEVEKGIGE 167
           G                                       YEAK+YGVV M+EVEKGIGE
Sbjct: 153 GEGVKESNDGISDSGNIGKLGLELKKDKKKKRKRDEIEAEYEAKRYGVVPMEEVEKGIGE 212

Query: 166 MVVGEKRKKMDNPEDMMVTNEGFDDESKLLRTIFVGNLDXXXXXXXXXKEFGSFG 2
           MVVGEKRKKMDNPEDMMV+NEGFDDESKLLRTIFVGNL          KEFGSFG
Sbjct: 213 MVVGEKRKKMDNPEDMMVSNEGFDDESKLLRTIFVGNLPLKIKKKALLKEFGSFG 267


>gb|EMJ11061.1| hypothetical protein PRUPE_ppa003774mg [Prunus persica]
          Length = 550

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 48/76 (63%), Positives = 56/76 (73%), Gaps = 1/76 (1%)
 Frame = -1

Query: 226 YEAKKYGVVDMDEV-EKGIGEMVVGEKRKKMDNPEDMMVTNEGFDDESKLLRTIFVGNLD 50
           YEAKKYGV + ++V +K +G  VVGEKRK +DNP DM+V+NEGFDDESKLLRTIFVGNL 
Sbjct: 179 YEAKKYGVKESEDVGDKDVGAKVVGEKRKMVDNPADMLVSNEGFDDESKLLRTIFVGNLP 238

Query: 49  XXXXXXXXXKEFGSFG 2
                    KEF  FG
Sbjct: 239 LKVKKKVLIKEFSKFG 254


>ref|NP_001267538.1| uncharacterized LOC101206555 [Cucumis sativus]
           gi|169219255|gb|ACA50448.1| putative RNA recognition
           motif-containing protein [Cucumis sativus]
          Length = 566

 Score = 91.7 bits (226), Expect = 1e-16
 Identities = 72/191 (37%), Positives = 91/191 (47%), Gaps = 12/191 (6%)
 Frame = -1

Query: 538 GKSKRVSLSGVDESNGVVFDYVKKKGKKVILGTEYVGEEANVDKDGKSKRVSLSGVEESN 359
           GK KRV +  +D + GV      KK KK         E  NVD DG+    S  G+++S+
Sbjct: 69  GKDKRVGID-LDSTEGVKTSSEIKKSKKKEKKKSLDRELDNVDDDGERGFESQGGLKDSS 127

Query: 358 GVVFDSLXXXXXXKVILGTESIGXXXXXXXXXXXXXXXXXXXXE----------YEAKKY 209
                          +LG+E+                      +          YEAKKY
Sbjct: 128 ----------KKKGTVLGSETSEKSHGFEGSKLGENVKLMKERKKRKRDELEREYEAKKY 177

Query: 208 GVVDM--DEVEKGIGEMVVGEKRKKMDNPEDMMVTNEGFDDESKLLRTIFVGNLDXXXXX 35
           GV D+  DEVE G G  VVG+KRK +D+P +M+VT EGFDDESKLLRT+FVGNL      
Sbjct: 178 GVSDVAEDEVE-GSGGNVVGKKRKALDDPSEMLVTKEGFDDESKLLRTVFVGNLPLKVKK 236

Query: 34  XXXXKEFGSFG 2
               KEF  FG
Sbjct: 237 KALAKEFSQFG 247


>ref|XP_004300414.1| PREDICTED: uncharacterized protein LOC101311380 [Fragaria vesca
           subsp. vesca]
          Length = 517

 Score = 82.0 bits (201), Expect = 8e-14
 Identities = 44/75 (58%), Positives = 52/75 (69%)
 Frame = -1

Query: 226 YEAKKYGVVDMDEVEKGIGEMVVGEKRKKMDNPEDMMVTNEGFDDESKLLRTIFVGNLDX 47
           YEAKKYGV +  E E  +G+ V GEKRK +DNP DM+V+ EGFDDESKLLRT+FVGNL  
Sbjct: 145 YEAKKYGVKENQE-EGDVGKKV-GEKRKTVDNPADMLVSEEGFDDESKLLRTVFVGNLPV 202

Query: 46  XXXXXXXXKEFGSFG 2
                   +EF  FG
Sbjct: 203 NVKKKVLIREFSKFG 217


>ref|XP_003612864.1| RNA-binding protein [Medicago truncatula]
           gi|355514199|gb|AES95822.1| RNA-binding protein
           [Medicago truncatula]
          Length = 518

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 66/183 (36%), Positives = 84/183 (45%), Gaps = 3/183 (1%)
 Frame = -1

Query: 541 DGKSKRVSLSGVDESNGVVFDYVKKKGKK---VILGTEYVGEEANVDKDGKSKRVSLSGV 371
           D   KR     +   NGVV +  +KK K+   VI     +  E +  K+ K K+ S SG 
Sbjct: 49  DNPYKRKPNQTLSPENGVVDEKKRKKNKEKSPVIDSNPII--EVSEKKEKKKKKKSGSGE 106

Query: 370 EESNGVVFDSLXXXXXXKVILGTESIGXXXXXXXXXXXXXXXXXXXXEYEAKKYGVVDMD 191
           EE               +V L  E +G                     +E KKYG+V+  
Sbjct: 107 EEEK-----------EKEVNLDGEGVGDKKKKKRKRDEVEKE------WEEKKYGIVEGG 149

Query: 190 EVEKGIGEMVVGEKRKKMDNPEDMMVTNEGFDDESKLLRTIFVGNLDXXXXXXXXXKEFG 11
           + ++ + +  VG KRK  DNP DMMVT EGFDDE KLLRTIFVGNL          KEF 
Sbjct: 150 DKDESVEK--VGNKRKVRDNPADMMVTKEGFDDEDKLLRTIFVGNLPVKVKKKTLLKEFK 207

Query: 10  SFG 2
            FG
Sbjct: 208 VFG 210


>gb|EPS65135.1| hypothetical protein M569_09644, partial [Genlisea aurea]
          Length = 196

 Score = 77.8 bits (190), Expect = 2e-12
 Identities = 41/75 (54%), Positives = 48/75 (64%)
 Frame = -1

Query: 226 YEAKKYGVVDMDEVEKGIGEMVVGEKRKKMDNPEDMMVTNEGFDDESKLLRTIFVGNLDX 47
           YEAK YGV   +  E      ++G KRK +DNPEDM+V+ EGFDDE KL+RTIFVGNL  
Sbjct: 16  YEAKHYGVAS-EAKEDAEKSSLLGSKRKNIDNPEDMVVSKEGFDDEDKLMRTIFVGNLPL 74

Query: 46  XXXXXXXXKEFGSFG 2
                   KEFG FG
Sbjct: 75  KAKKKELLKEFGKFG 89


>gb|EXB66545.1| RNA-binding protein 34 [Morus notabilis]
          Length = 510

 Score = 77.0 bits (188), Expect = 3e-12
 Identities = 43/78 (55%), Positives = 50/78 (64%), Gaps = 3/78 (3%)
 Frame = -1

Query: 226 YEAKKYGVVD---MDEVEKGIGEMVVGEKRKKMDNPEDMMVTNEGFDDESKLLRTIFVGN 56
           YEA+KYG VD    +E EK +   V GEKRK +DNP + +V  EGFDDESKLLRT+FVGN
Sbjct: 139 YEARKYGAVDGNVAEEEEKRLSGKV-GEKRKSVDNPAETLVPKEGFDDESKLLRTVFVGN 197

Query: 55  LDXXXXXXXXXKEFGSFG 2
           L          KEF  FG
Sbjct: 198 LPLSTKKKALIKEFSKFG 215


>ref|XP_003533438.1| PREDICTED: nucleolar protein 12-like [Glycine max]
          Length = 519

 Score = 75.5 bits (184), Expect = 8e-12
 Identities = 40/75 (53%), Positives = 48/75 (64%)
 Frame = -1

Query: 226 YEAKKYGVVDMDEVEKGIGEMVVGEKRKKMDNPEDMMVTNEGFDDESKLLRTIFVGNLDX 47
           +E KKYG+V     E+G+    VG KRK +D+P DMMV+ EGFDDE KLLRT+FVGNL  
Sbjct: 148 WEEKKYGIV-----EEGLENKTVGIKRKTLDDPADMMVSKEGFDDEDKLLRTVFVGNLPL 202

Query: 46  XXXXXXXXKEFGSFG 2
                   KEF  FG
Sbjct: 203 KVKKKTLLKEFKKFG 217


>ref|NP_199496.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
           gi|8809667|dbj|BAA97218.1| unnamed protein product
           [Arabidopsis thaliana] gi|32441262|gb|AAP81806.1|
           At5g46840 [Arabidopsis thaliana]
           gi|110736326|dbj|BAF00133.1| hypothetical protein
           [Arabidopsis thaliana] gi|332008049|gb|AED95432.1| RNA
           recognition motif-containing protein [Arabidopsis
           thaliana]
          Length = 501

 Score = 75.1 bits (183), Expect = 1e-11
 Identities = 42/75 (56%), Positives = 46/75 (61%)
 Frame = -1

Query: 226 YEAKKYGVVDMDEVEKGIGEMVVGEKRKKMDNPEDMMVTNEGFDDESKLLRTIFVGNLDX 47
           YE KKYG V+M E +       VGEKRKK D   D MV+ EGFDDESKLLRT+FVGNL  
Sbjct: 128 YETKKYGSVEMKEKK-------VGEKRKKADEVADTMVSKEGFDDESKLLRTVFVGNLPL 180

Query: 46  XXXXXXXXKEFGSFG 2
                   KEF  FG
Sbjct: 181 KVKKKVILKEFSKFG 195


>ref|XP_006280324.1| hypothetical protein CARUB_v10026247mg [Capsella rubella]
           gi|482549028|gb|EOA13222.1| hypothetical protein
           CARUB_v10026247mg [Capsella rubella]
          Length = 511

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 41/75 (54%), Positives = 47/75 (62%)
 Frame = -1

Query: 226 YEAKKYGVVDMDEVEKGIGEMVVGEKRKKMDNPEDMMVTNEGFDDESKLLRTIFVGNLDX 47
           YE KKYG V++ + +K      VGEKRKK D   D MV+ EGFDDESKLLRT+FVGNL  
Sbjct: 135 YETKKYGSVEVKKEKK------VGEKRKKADEVADTMVSKEGFDDESKLLRTVFVGNLPL 188

Query: 46  XXXXXXXXKEFGSFG 2
                   KEF  FG
Sbjct: 189 KVKKKVILKEFSKFG 203


>gb|ESW30281.1| hypothetical protein PHAVU_002G139900g [Phaseolus vulgaris]
          Length = 524

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 40/75 (53%), Positives = 47/75 (62%)
 Frame = -1

Query: 226 YEAKKYGVVDMDEVEKGIGEMVVGEKRKKMDNPEDMMVTNEGFDDESKLLRTIFVGNLDX 47
           +E K+YG V+  E E GI    VG KRK +D+P D MV+ EGFDDE KLLRT+FVGNL  
Sbjct: 137 WEEKRYGPVEKVEKE-GIENKTVGNKRKTLDDPADTMVSKEGFDDEDKLLRTVFVGNLPL 195

Query: 46  XXXXXXXXKEFGSFG 2
                   KEF  FG
Sbjct: 196 KVKKKILLKEFKKFG 210


>ref|XP_003517031.1| PREDICTED: nucleolar protein 12-like [Glycine max]
          Length = 515

 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 40/75 (53%), Positives = 47/75 (62%)
 Frame = -1

Query: 226 YEAKKYGVVDMDEVEKGIGEMVVGEKRKKMDNPEDMMVTNEGFDDESKLLRTIFVGNLDX 47
           +E KKYG V     E+GI    VG KRK +D+P DMMV+ EGFD+E KLLRT+FVGNL  
Sbjct: 144 WEEKKYGAV-----EEGIENKTVGIKRKTLDDPADMMVSKEGFDNEDKLLRTVFVGNLPL 198

Query: 46  XXXXXXXXKEFGSFG 2
                   KEF  FG
Sbjct: 199 KVKKKTLLKEFKKFG 213


>gb|AAM63703.1| unknown [Arabidopsis thaliana]
          Length = 501

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 41/75 (54%), Positives = 45/75 (60%)
 Frame = -1

Query: 226 YEAKKYGVVDMDEVEKGIGEMVVGEKRKKMDNPEDMMVTNEGFDDESKLLRTIFVGNLDX 47
           YE  KYG V+M E +       VGEKRKK D   D MV+ EGFDDESKLLRT+FVGNL  
Sbjct: 128 YETXKYGSVEMKEKK-------VGEKRKKADEVADTMVSKEGFDDESKLLRTVFVGNLPL 180

Query: 46  XXXXXXXXKEFGSFG 2
                   KEF  FG
Sbjct: 181 KVKKKVILKEFSKFG 195


>ref|XP_006398378.1| hypothetical protein EUTSA_v10000858mg [Eutrema salsugineum]
           gi|557099467|gb|ESQ39831.1| hypothetical protein
           EUTSA_v10000858mg [Eutrema salsugineum]
          Length = 519

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 41/75 (54%), Positives = 45/75 (60%)
 Frame = -1

Query: 226 YEAKKYGVVDMDEVEKGIGEMVVGEKRKKMDNPEDMMVTNEGFDDESKLLRTIFVGNLDX 47
           YE KKYG V+  E +       VGEKRKK D   D MV+ EGFDDESKLLRT+FVGNL  
Sbjct: 143 YETKKYGSVEKKEKK-------VGEKRKKADEIADTMVSKEGFDDESKLLRTVFVGNLPL 195

Query: 46  XXXXXXXXKEFGSFG 2
                   KEF  FG
Sbjct: 196 KVKKKLILKEFSKFG 210


>ref|XP_004512514.1| PREDICTED: nucleolar protein 12-like [Cicer arietinum]
          Length = 525

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 38/75 (50%), Positives = 47/75 (62%)
 Frame = -1

Query: 226 YEAKKYGVVDMDEVEKGIGEMVVGEKRKKMDNPEDMMVTNEGFDDESKLLRTIFVGNLDX 47
           ++ KK+G+V+ +E    +G   VG KRK   NP DM+V+ EGFDDE KLLRTIFVGNL  
Sbjct: 149 WDEKKFGMVEREE----LGNETVGNKRKVRHNPADMLVSKEGFDDEDKLLRTIFVGNLPL 204

Query: 46  XXXXXXXXKEFGSFG 2
                   KEF  FG
Sbjct: 205 KVKKKTLLKEFKIFG 219


>ref|XP_002865157.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
           lyrata] gi|297310992|gb|EFH41416.1| RNA recognition
           motif-containing protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 509

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 40/75 (53%), Positives = 44/75 (58%)
 Frame = -1

Query: 226 YEAKKYGVVDMDEVEKGIGEMVVGEKRKKMDNPEDMMVTNEGFDDESKLLRTIFVGNLDX 47
           YE KKYG V+  +V         GEKRKK D   D MV+ EGFDDESKLLRT+FVGNL  
Sbjct: 136 YETKKYGSVEKKKV---------GEKRKKADEVADTMVSKEGFDDESKLLRTVFVGNLPL 186

Query: 46  XXXXXXXXKEFGSFG 2
                   KEF  FG
Sbjct: 187 KVKKKVILKEFSKFG 201


>ref|XP_002527654.1| RNA binding protein, putative [Ricinus communis]
           gi|223532959|gb|EEF34725.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 830

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 43/79 (54%), Positives = 49/79 (62%), Gaps = 4/79 (5%)
 Frame = -1

Query: 226 YEAKKYGVVDMDEVEKGIGEMVVGEKRKKMDNPE-DMMVTNEG---FDDESKLLRTIFVG 59
           YEAKKYG     EV +    + VGEKRKK +N E DM+V+ EG   FDDESKLLRT+FVG
Sbjct: 112 YEAKKYG---SPEVSRNAVVVAVGEKRKKAENAEEDMLVSKEGGEGFDDESKLLRTVFVG 168

Query: 58  NLDXXXXXXXXXKEFGSFG 2
           NL          KEF  FG
Sbjct: 169 NLPLKMKKKTLVKEFSQFG 187


>ref|XP_006445702.1| hypothetical protein CICLE_v10014807mg [Citrus clementina]
           gi|568883279|ref|XP_006494404.1| PREDICTED: nucleolar
           protein 12-like isoform X1 [Citrus sinensis]
           gi|568883281|ref|XP_006494405.1| PREDICTED: nucleolar
           protein 12-like isoform X2 [Citrus sinensis]
           gi|557548313|gb|ESR58942.1| hypothetical protein
           CICLE_v10014807mg [Citrus clementina]
          Length = 548

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 44/78 (56%), Positives = 49/78 (62%), Gaps = 3/78 (3%)
 Frame = -1

Query: 226 YEAKKYGVVDMDEVEKGIGEMVVGEKRKKMDNP-EDMMV--TNEGFDDESKLLRTIFVGN 56
           Y  KKYGV+  +E  K   ++VVGEKRKK DN  EDM+V    EGFDDE KLLRTIFVGN
Sbjct: 176 YVEKKYGVIAKEEEGK---KVVVGEKRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGN 232

Query: 55  LDXXXXXXXXXKEFGSFG 2
           L          KEF  FG
Sbjct: 233 LPLKVKKKTLIKEFIKFG 250


>ref|XP_002326533.1| predicted protein [Populus trichocarpa]
           gi|566146755|ref|XP_006368382.1| RNA recognition
           motif-containing family protein [Populus trichocarpa]
           gi|550346295|gb|ERP64951.1| RNA recognition
           motif-containing family protein [Populus trichocarpa]
          Length = 487

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 42/78 (53%), Positives = 50/78 (64%), Gaps = 3/78 (3%)
 Frame = -1

Query: 226 YEAKKYG-VVDMDEVEKGIGEMVVGEKRKKMDNPEDMMVT--NEGFDDESKLLRTIFVGN 56
           YEAKKYG VVD +E       +VVG KRK  D+  D++V+  +EGFDDESKLLRT+FVGN
Sbjct: 115 YEAKKYGPVVDNEEN----ASVVVGAKRKNTDDAADVLVSKESEGFDDESKLLRTVFVGN 170

Query: 55  LDXXXXXXXXXKEFGSFG 2
           L          KEF  FG
Sbjct: 171 LPLKVKKKTLIKEFSKFG 188


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