BLASTX nr result
ID: Atropa21_contig00031544
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00031544
(541 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004245924.1| PREDICTED: nucleolar protein 12-like [Solanu... 162 4e-38
ref|XP_006352880.1| PREDICTED: nucleolar protein 12-like [Solanu... 160 2e-37
gb|EMJ11061.1| hypothetical protein PRUPE_ppa003774mg [Prunus pe... 93 3e-17
ref|NP_001267538.1| uncharacterized LOC101206555 [Cucumis sativu... 92 1e-16
ref|XP_004300414.1| PREDICTED: uncharacterized protein LOC101311... 82 8e-14
ref|XP_003612864.1| RNA-binding protein [Medicago truncatula] gi... 80 2e-13
gb|EPS65135.1| hypothetical protein M569_09644, partial [Genlise... 78 2e-12
gb|EXB66545.1| RNA-binding protein 34 [Morus notabilis] 77 3e-12
ref|XP_003533438.1| PREDICTED: nucleolar protein 12-like [Glycin... 75 8e-12
ref|NP_199496.1| RNA recognition motif-containing protein [Arabi... 75 1e-11
ref|XP_006280324.1| hypothetical protein CARUB_v10026247mg [Caps... 74 2e-11
gb|ESW30281.1| hypothetical protein PHAVU_002G139900g [Phaseolus... 74 3e-11
ref|XP_003517031.1| PREDICTED: nucleolar protein 12-like [Glycin... 73 4e-11
gb|AAM63703.1| unknown [Arabidopsis thaliana] 73 5e-11
ref|XP_006398378.1| hypothetical protein EUTSA_v10000858mg [Eutr... 72 6e-11
ref|XP_004512514.1| PREDICTED: nucleolar protein 12-like [Cicer ... 71 2e-10
ref|XP_002865157.1| RNA recognition motif-containing protein [Ar... 71 2e-10
ref|XP_002527654.1| RNA binding protein, putative [Ricinus commu... 70 4e-10
ref|XP_006445702.1| hypothetical protein CICLE_v10014807mg [Citr... 69 7e-10
ref|XP_002326533.1| predicted protein [Populus trichocarpa] gi|5... 68 1e-09
>ref|XP_004245924.1| PREDICTED: nucleolar protein 12-like [Solanum lycopersicum]
Length = 565
Score = 162 bits (411), Expect = 4e-38
Identities = 99/190 (52%), Positives = 112/190 (58%), Gaps = 18/190 (9%)
Frame = -1
Query: 517 LSGVDESNGVVFDYVKKKGKKVILGTEYVGEEANVDKDGKSKRVSLSGVEESNGVVFDSL 338
+SG ++S KKK KKV L + V EE N ++ GKSKRV+LSGVEESNGVV DS
Sbjct: 78 VSGNNDSGSAELKKRKKKDKKVNLDSGSVAEEVNEEEGGKSKRVALSGVEESNGVVSDSG 137
Query: 337 XXXXXXKVILGTESIGXXXXXXXXXXXXXXXXXXXXE------------------YEAKK 212
VILG ES+G YEAK+
Sbjct: 138 RKKKAKNVILGLESVGEGVKESNDGVSNSGNLEKSGLESKKDKKKKRKRDEIEAEYEAKR 197
Query: 211 YGVVDMDEVEKGIGEMVVGEKRKKMDNPEDMMVTNEGFDDESKLLRTIFVGNLDXXXXXX 32
YGVV +++VEKGIGEMVVGEKRKKMDNPEDMMV+NEGFDDESKLLRTIFVGNL
Sbjct: 198 YGVVAVEDVEKGIGEMVVGEKRKKMDNPEDMMVSNEGFDDESKLLRTIFVGNLPLKIKKK 257
Query: 31 XXXKEFGSFG 2
KEFGSFG
Sbjct: 258 ALLKEFGSFG 267
>ref|XP_006352880.1| PREDICTED: nucleolar protein 12-like [Solanum tuberosum]
Length = 565
Score = 160 bits (404), Expect = 2e-37
Identities = 98/175 (56%), Positives = 106/175 (60%), Gaps = 18/175 (10%)
Frame = -1
Query: 472 KKKGKKVILGTEYVGEEANVDKDGKSKRVSLSGVEESNGVVFDSLXXXXXXKVILGTESI 293
KKK KKV L + V EE N ++ KSKRV+LSGVEESNGVV DS KVILG ES+
Sbjct: 93 KKKDKKVNLDSGSVAEEGNEEEGEKSKRVALSGVEESNGVVSDSGRKKKDKKVILGLESV 152
Query: 292 GXXXXXXXXXXXXXXXXXXXXE------------------YEAKKYGVVDMDEVEKGIGE 167
G YEAK+YGVV M+EVEKGIGE
Sbjct: 153 GEGVKESNDGISDSGNIGKLGLELKKDKKKKRKRDEIEAEYEAKRYGVVPMEEVEKGIGE 212
Query: 166 MVVGEKRKKMDNPEDMMVTNEGFDDESKLLRTIFVGNLDXXXXXXXXXKEFGSFG 2
MVVGEKRKKMDNPEDMMV+NEGFDDESKLLRTIFVGNL KEFGSFG
Sbjct: 213 MVVGEKRKKMDNPEDMMVSNEGFDDESKLLRTIFVGNLPLKIKKKALLKEFGSFG 267
>gb|EMJ11061.1| hypothetical protein PRUPE_ppa003774mg [Prunus persica]
Length = 550
Score = 93.2 bits (230), Expect = 3e-17
Identities = 48/76 (63%), Positives = 56/76 (73%), Gaps = 1/76 (1%)
Frame = -1
Query: 226 YEAKKYGVVDMDEV-EKGIGEMVVGEKRKKMDNPEDMMVTNEGFDDESKLLRTIFVGNLD 50
YEAKKYGV + ++V +K +G VVGEKRK +DNP DM+V+NEGFDDESKLLRTIFVGNL
Sbjct: 179 YEAKKYGVKESEDVGDKDVGAKVVGEKRKMVDNPADMLVSNEGFDDESKLLRTIFVGNLP 238
Query: 49 XXXXXXXXXKEFGSFG 2
KEF FG
Sbjct: 239 LKVKKKVLIKEFSKFG 254
>ref|NP_001267538.1| uncharacterized LOC101206555 [Cucumis sativus]
gi|169219255|gb|ACA50448.1| putative RNA recognition
motif-containing protein [Cucumis sativus]
Length = 566
Score = 91.7 bits (226), Expect = 1e-16
Identities = 72/191 (37%), Positives = 91/191 (47%), Gaps = 12/191 (6%)
Frame = -1
Query: 538 GKSKRVSLSGVDESNGVVFDYVKKKGKKVILGTEYVGEEANVDKDGKSKRVSLSGVEESN 359
GK KRV + +D + GV KK KK E NVD DG+ S G+++S+
Sbjct: 69 GKDKRVGID-LDSTEGVKTSSEIKKSKKKEKKKSLDRELDNVDDDGERGFESQGGLKDSS 127
Query: 358 GVVFDSLXXXXXXKVILGTESIGXXXXXXXXXXXXXXXXXXXXE----------YEAKKY 209
+LG+E+ + YEAKKY
Sbjct: 128 ----------KKKGTVLGSETSEKSHGFEGSKLGENVKLMKERKKRKRDELEREYEAKKY 177
Query: 208 GVVDM--DEVEKGIGEMVVGEKRKKMDNPEDMMVTNEGFDDESKLLRTIFVGNLDXXXXX 35
GV D+ DEVE G G VVG+KRK +D+P +M+VT EGFDDESKLLRT+FVGNL
Sbjct: 178 GVSDVAEDEVE-GSGGNVVGKKRKALDDPSEMLVTKEGFDDESKLLRTVFVGNLPLKVKK 236
Query: 34 XXXXKEFGSFG 2
KEF FG
Sbjct: 237 KALAKEFSQFG 247
>ref|XP_004300414.1| PREDICTED: uncharacterized protein LOC101311380 [Fragaria vesca
subsp. vesca]
Length = 517
Score = 82.0 bits (201), Expect = 8e-14
Identities = 44/75 (58%), Positives = 52/75 (69%)
Frame = -1
Query: 226 YEAKKYGVVDMDEVEKGIGEMVVGEKRKKMDNPEDMMVTNEGFDDESKLLRTIFVGNLDX 47
YEAKKYGV + E E +G+ V GEKRK +DNP DM+V+ EGFDDESKLLRT+FVGNL
Sbjct: 145 YEAKKYGVKENQE-EGDVGKKV-GEKRKTVDNPADMLVSEEGFDDESKLLRTVFVGNLPV 202
Query: 46 XXXXXXXXKEFGSFG 2
+EF FG
Sbjct: 203 NVKKKVLIREFSKFG 217
>ref|XP_003612864.1| RNA-binding protein [Medicago truncatula]
gi|355514199|gb|AES95822.1| RNA-binding protein
[Medicago truncatula]
Length = 518
Score = 80.5 bits (197), Expect = 2e-13
Identities = 66/183 (36%), Positives = 84/183 (45%), Gaps = 3/183 (1%)
Frame = -1
Query: 541 DGKSKRVSLSGVDESNGVVFDYVKKKGKK---VILGTEYVGEEANVDKDGKSKRVSLSGV 371
D KR + NGVV + +KK K+ VI + E + K+ K K+ S SG
Sbjct: 49 DNPYKRKPNQTLSPENGVVDEKKRKKNKEKSPVIDSNPII--EVSEKKEKKKKKKSGSGE 106
Query: 370 EESNGVVFDSLXXXXXXKVILGTESIGXXXXXXXXXXXXXXXXXXXXEYEAKKYGVVDMD 191
EE +V L E +G +E KKYG+V+
Sbjct: 107 EEEK-----------EKEVNLDGEGVGDKKKKKRKRDEVEKE------WEEKKYGIVEGG 149
Query: 190 EVEKGIGEMVVGEKRKKMDNPEDMMVTNEGFDDESKLLRTIFVGNLDXXXXXXXXXKEFG 11
+ ++ + + VG KRK DNP DMMVT EGFDDE KLLRTIFVGNL KEF
Sbjct: 150 DKDESVEK--VGNKRKVRDNPADMMVTKEGFDDEDKLLRTIFVGNLPVKVKKKTLLKEFK 207
Query: 10 SFG 2
FG
Sbjct: 208 VFG 210
>gb|EPS65135.1| hypothetical protein M569_09644, partial [Genlisea aurea]
Length = 196
Score = 77.8 bits (190), Expect = 2e-12
Identities = 41/75 (54%), Positives = 48/75 (64%)
Frame = -1
Query: 226 YEAKKYGVVDMDEVEKGIGEMVVGEKRKKMDNPEDMMVTNEGFDDESKLLRTIFVGNLDX 47
YEAK YGV + E ++G KRK +DNPEDM+V+ EGFDDE KL+RTIFVGNL
Sbjct: 16 YEAKHYGVAS-EAKEDAEKSSLLGSKRKNIDNPEDMVVSKEGFDDEDKLMRTIFVGNLPL 74
Query: 46 XXXXXXXXKEFGSFG 2
KEFG FG
Sbjct: 75 KAKKKELLKEFGKFG 89
>gb|EXB66545.1| RNA-binding protein 34 [Morus notabilis]
Length = 510
Score = 77.0 bits (188), Expect = 3e-12
Identities = 43/78 (55%), Positives = 50/78 (64%), Gaps = 3/78 (3%)
Frame = -1
Query: 226 YEAKKYGVVD---MDEVEKGIGEMVVGEKRKKMDNPEDMMVTNEGFDDESKLLRTIFVGN 56
YEA+KYG VD +E EK + V GEKRK +DNP + +V EGFDDESKLLRT+FVGN
Sbjct: 139 YEARKYGAVDGNVAEEEEKRLSGKV-GEKRKSVDNPAETLVPKEGFDDESKLLRTVFVGN 197
Query: 55 LDXXXXXXXXXKEFGSFG 2
L KEF FG
Sbjct: 198 LPLSTKKKALIKEFSKFG 215
>ref|XP_003533438.1| PREDICTED: nucleolar protein 12-like [Glycine max]
Length = 519
Score = 75.5 bits (184), Expect = 8e-12
Identities = 40/75 (53%), Positives = 48/75 (64%)
Frame = -1
Query: 226 YEAKKYGVVDMDEVEKGIGEMVVGEKRKKMDNPEDMMVTNEGFDDESKLLRTIFVGNLDX 47
+E KKYG+V E+G+ VG KRK +D+P DMMV+ EGFDDE KLLRT+FVGNL
Sbjct: 148 WEEKKYGIV-----EEGLENKTVGIKRKTLDDPADMMVSKEGFDDEDKLLRTVFVGNLPL 202
Query: 46 XXXXXXXXKEFGSFG 2
KEF FG
Sbjct: 203 KVKKKTLLKEFKKFG 217
>ref|NP_199496.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|8809667|dbj|BAA97218.1| unnamed protein product
[Arabidopsis thaliana] gi|32441262|gb|AAP81806.1|
At5g46840 [Arabidopsis thaliana]
gi|110736326|dbj|BAF00133.1| hypothetical protein
[Arabidopsis thaliana] gi|332008049|gb|AED95432.1| RNA
recognition motif-containing protein [Arabidopsis
thaliana]
Length = 501
Score = 75.1 bits (183), Expect = 1e-11
Identities = 42/75 (56%), Positives = 46/75 (61%)
Frame = -1
Query: 226 YEAKKYGVVDMDEVEKGIGEMVVGEKRKKMDNPEDMMVTNEGFDDESKLLRTIFVGNLDX 47
YE KKYG V+M E + VGEKRKK D D MV+ EGFDDESKLLRT+FVGNL
Sbjct: 128 YETKKYGSVEMKEKK-------VGEKRKKADEVADTMVSKEGFDDESKLLRTVFVGNLPL 180
Query: 46 XXXXXXXXKEFGSFG 2
KEF FG
Sbjct: 181 KVKKKVILKEFSKFG 195
>ref|XP_006280324.1| hypothetical protein CARUB_v10026247mg [Capsella rubella]
gi|482549028|gb|EOA13222.1| hypothetical protein
CARUB_v10026247mg [Capsella rubella]
Length = 511
Score = 74.3 bits (181), Expect = 2e-11
Identities = 41/75 (54%), Positives = 47/75 (62%)
Frame = -1
Query: 226 YEAKKYGVVDMDEVEKGIGEMVVGEKRKKMDNPEDMMVTNEGFDDESKLLRTIFVGNLDX 47
YE KKYG V++ + +K VGEKRKK D D MV+ EGFDDESKLLRT+FVGNL
Sbjct: 135 YETKKYGSVEVKKEKK------VGEKRKKADEVADTMVSKEGFDDESKLLRTVFVGNLPL 188
Query: 46 XXXXXXXXKEFGSFG 2
KEF FG
Sbjct: 189 KVKKKVILKEFSKFG 203
>gb|ESW30281.1| hypothetical protein PHAVU_002G139900g [Phaseolus vulgaris]
Length = 524
Score = 73.6 bits (179), Expect = 3e-11
Identities = 40/75 (53%), Positives = 47/75 (62%)
Frame = -1
Query: 226 YEAKKYGVVDMDEVEKGIGEMVVGEKRKKMDNPEDMMVTNEGFDDESKLLRTIFVGNLDX 47
+E K+YG V+ E E GI VG KRK +D+P D MV+ EGFDDE KLLRT+FVGNL
Sbjct: 137 WEEKRYGPVEKVEKE-GIENKTVGNKRKTLDDPADTMVSKEGFDDEDKLLRTVFVGNLPL 195
Query: 46 XXXXXXXXKEFGSFG 2
KEF FG
Sbjct: 196 KVKKKILLKEFKKFG 210
>ref|XP_003517031.1| PREDICTED: nucleolar protein 12-like [Glycine max]
Length = 515
Score = 73.2 bits (178), Expect = 4e-11
Identities = 40/75 (53%), Positives = 47/75 (62%)
Frame = -1
Query: 226 YEAKKYGVVDMDEVEKGIGEMVVGEKRKKMDNPEDMMVTNEGFDDESKLLRTIFVGNLDX 47
+E KKYG V E+GI VG KRK +D+P DMMV+ EGFD+E KLLRT+FVGNL
Sbjct: 144 WEEKKYGAV-----EEGIENKTVGIKRKTLDDPADMMVSKEGFDNEDKLLRTVFVGNLPL 198
Query: 46 XXXXXXXXKEFGSFG 2
KEF FG
Sbjct: 199 KVKKKTLLKEFKKFG 213
>gb|AAM63703.1| unknown [Arabidopsis thaliana]
Length = 501
Score = 72.8 bits (177), Expect = 5e-11
Identities = 41/75 (54%), Positives = 45/75 (60%)
Frame = -1
Query: 226 YEAKKYGVVDMDEVEKGIGEMVVGEKRKKMDNPEDMMVTNEGFDDESKLLRTIFVGNLDX 47
YE KYG V+M E + VGEKRKK D D MV+ EGFDDESKLLRT+FVGNL
Sbjct: 128 YETXKYGSVEMKEKK-------VGEKRKKADEVADTMVSKEGFDDESKLLRTVFVGNLPL 180
Query: 46 XXXXXXXXKEFGSFG 2
KEF FG
Sbjct: 181 KVKKKVILKEFSKFG 195
>ref|XP_006398378.1| hypothetical protein EUTSA_v10000858mg [Eutrema salsugineum]
gi|557099467|gb|ESQ39831.1| hypothetical protein
EUTSA_v10000858mg [Eutrema salsugineum]
Length = 519
Score = 72.4 bits (176), Expect = 6e-11
Identities = 41/75 (54%), Positives = 45/75 (60%)
Frame = -1
Query: 226 YEAKKYGVVDMDEVEKGIGEMVVGEKRKKMDNPEDMMVTNEGFDDESKLLRTIFVGNLDX 47
YE KKYG V+ E + VGEKRKK D D MV+ EGFDDESKLLRT+FVGNL
Sbjct: 143 YETKKYGSVEKKEKK-------VGEKRKKADEIADTMVSKEGFDDESKLLRTVFVGNLPL 195
Query: 46 XXXXXXXXKEFGSFG 2
KEF FG
Sbjct: 196 KVKKKLILKEFSKFG 210
>ref|XP_004512514.1| PREDICTED: nucleolar protein 12-like [Cicer arietinum]
Length = 525
Score = 70.9 bits (172), Expect = 2e-10
Identities = 38/75 (50%), Positives = 47/75 (62%)
Frame = -1
Query: 226 YEAKKYGVVDMDEVEKGIGEMVVGEKRKKMDNPEDMMVTNEGFDDESKLLRTIFVGNLDX 47
++ KK+G+V+ +E +G VG KRK NP DM+V+ EGFDDE KLLRTIFVGNL
Sbjct: 149 WDEKKFGMVEREE----LGNETVGNKRKVRHNPADMLVSKEGFDDEDKLLRTIFVGNLPL 204
Query: 46 XXXXXXXXKEFGSFG 2
KEF FG
Sbjct: 205 KVKKKTLLKEFKIFG 219
>ref|XP_002865157.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata] gi|297310992|gb|EFH41416.1| RNA recognition
motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 509
Score = 70.9 bits (172), Expect = 2e-10
Identities = 40/75 (53%), Positives = 44/75 (58%)
Frame = -1
Query: 226 YEAKKYGVVDMDEVEKGIGEMVVGEKRKKMDNPEDMMVTNEGFDDESKLLRTIFVGNLDX 47
YE KKYG V+ +V GEKRKK D D MV+ EGFDDESKLLRT+FVGNL
Sbjct: 136 YETKKYGSVEKKKV---------GEKRKKADEVADTMVSKEGFDDESKLLRTVFVGNLPL 186
Query: 46 XXXXXXXXKEFGSFG 2
KEF FG
Sbjct: 187 KVKKKVILKEFSKFG 201
>ref|XP_002527654.1| RNA binding protein, putative [Ricinus communis]
gi|223532959|gb|EEF34725.1| RNA binding protein,
putative [Ricinus communis]
Length = 830
Score = 69.7 bits (169), Expect = 4e-10
Identities = 43/79 (54%), Positives = 49/79 (62%), Gaps = 4/79 (5%)
Frame = -1
Query: 226 YEAKKYGVVDMDEVEKGIGEMVVGEKRKKMDNPE-DMMVTNEG---FDDESKLLRTIFVG 59
YEAKKYG EV + + VGEKRKK +N E DM+V+ EG FDDESKLLRT+FVG
Sbjct: 112 YEAKKYG---SPEVSRNAVVVAVGEKRKKAENAEEDMLVSKEGGEGFDDESKLLRTVFVG 168
Query: 58 NLDXXXXXXXXXKEFGSFG 2
NL KEF FG
Sbjct: 169 NLPLKMKKKTLVKEFSQFG 187
>ref|XP_006445702.1| hypothetical protein CICLE_v10014807mg [Citrus clementina]
gi|568883279|ref|XP_006494404.1| PREDICTED: nucleolar
protein 12-like isoform X1 [Citrus sinensis]
gi|568883281|ref|XP_006494405.1| PREDICTED: nucleolar
protein 12-like isoform X2 [Citrus sinensis]
gi|557548313|gb|ESR58942.1| hypothetical protein
CICLE_v10014807mg [Citrus clementina]
Length = 548
Score = 68.9 bits (167), Expect = 7e-10
Identities = 44/78 (56%), Positives = 49/78 (62%), Gaps = 3/78 (3%)
Frame = -1
Query: 226 YEAKKYGVVDMDEVEKGIGEMVVGEKRKKMDNP-EDMMV--TNEGFDDESKLLRTIFVGN 56
Y KKYGV+ +E K ++VVGEKRKK DN EDM+V EGFDDE KLLRTIFVGN
Sbjct: 176 YVEKKYGVIAKEEEGK---KVVVGEKRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGN 232
Query: 55 LDXXXXXXXXXKEFGSFG 2
L KEF FG
Sbjct: 233 LPLKVKKKTLIKEFIKFG 250
>ref|XP_002326533.1| predicted protein [Populus trichocarpa]
gi|566146755|ref|XP_006368382.1| RNA recognition
motif-containing family protein [Populus trichocarpa]
gi|550346295|gb|ERP64951.1| RNA recognition
motif-containing family protein [Populus trichocarpa]
Length = 487
Score = 68.2 bits (165), Expect = 1e-09
Identities = 42/78 (53%), Positives = 50/78 (64%), Gaps = 3/78 (3%)
Frame = -1
Query: 226 YEAKKYG-VVDMDEVEKGIGEMVVGEKRKKMDNPEDMMVT--NEGFDDESKLLRTIFVGN 56
YEAKKYG VVD +E +VVG KRK D+ D++V+ +EGFDDESKLLRT+FVGN
Sbjct: 115 YEAKKYGPVVDNEEN----ASVVVGAKRKNTDDAADVLVSKESEGFDDESKLLRTVFVGN 170
Query: 55 LDXXXXXXXXXKEFGSFG 2
L KEF FG
Sbjct: 171 LPLKVKKKTLIKEFSKFG 188