BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00031541
         (615 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006362608.1| PREDICTED: transcription initiation factor T...    78   4e-21
ref|XP_002321800.1| hypothetical protein POPTR_0015s15700g [Popu...    52   7e-06

>ref|XP_006362608.1| PREDICTED: transcription initiation factor TFIID subunit 8-like
           [Solanum tuberosum]
          Length = 271

 Score = 77.8 bits (190), Expect(3) = 4e-21
 Identities = 42/67 (62%), Positives = 50/67 (74%), Gaps = 2/67 (2%)
 Frame = -3

Query: 448 MRS*SKCNRPLAT--IPPPSTASTESDYAFTLTKIAVAKICSSIGFAAAETPVLRILSKV 275
           M S S  NRPLA   IPPPST  +ESDYAFT+T+ AVA+ICSSIGF AAE PVL IL+ +
Sbjct: 1   MSSKSNRNRPLAAKAIPPPSTPLSESDYAFTITRTAVAQICSSIGFTAAEAPVLGILTDI 60

Query: 274 STMCLRS 254
           +   LR+
Sbjct: 61  AVRYLRT 67



 Score = 41.6 bits (96), Expect(3) = 4e-21
 Identities = 19/30 (63%), Positives = 24/30 (80%)
 Frame = -2

Query: 251 NSVNSTGRMQSNLVNTVAVVEELSFVSGFP 162
           +S NS  R Q+NLV+T+A V+ELS VSGFP
Sbjct: 74  DSANSASRTQANLVDTIAAVDELSSVSGFP 103



 Score = 28.1 bits (61), Expect(3) = 4e-21
 Identities = 12/16 (75%), Positives = 12/16 (75%)
 Frame = -1

Query: 165 PEAWSATGSFLNSGFV 118
           P AW ATG FLNSG V
Sbjct: 103 PGAWRATGCFLNSGAV 118


>ref|XP_002321800.1| hypothetical protein POPTR_0015s15700g [Populus trichocarpa]
           gi|222868796|gb|EEF05927.1| hypothetical protein
           POPTR_0015s15700g [Populus trichocarpa]
          Length = 267

 Score = 52.0 bits (123), Expect(2) = 7e-06
 Identities = 22/51 (43%), Positives = 34/51 (66%)
 Frame = -3

Query: 406 PPPSTASTESDYAFTLTKIAVAKICSSIGFAAAETPVLRILSKVSTMCLRS 254
           PPP  A   SDYAF +TK AV++IC S+GF + +   L  L+ ++T+ L++
Sbjct: 26  PPPPLAENPSDYAFKITKTAVSQICQSVGFKSTQLSALETLTHIATLYLQT 76



 Score = 23.9 bits (50), Expect(2) = 7e-06
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = -2

Query: 242 NSTGRMQSNLVNTVAVVEELSFVSGF 165
           N++ R QSN+ + +  + ++S V GF
Sbjct: 86  NASNRTQSNIFDIINSLHDMSSVQGF 111