BLASTX nr result
ID: Atropa21_contig00031471
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00031471
(1592 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga... 92 2e-27
gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptas... 87 1e-25
gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptas... 98 1e-24
gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis ... 86 5e-24
gb|AAC63844.1| putative non-LTR retroelement reverse transcripta... 89 1e-23
gb|AAD37021.1| putative non-LTR retrolelement reverse transcript... 85 1e-22
emb|CAB78008.1| putative protein [Arabidopsis thaliana] gi|73210... 77 1e-20
emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis ... 95 1e-19
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas] 80 1e-19
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas] 80 1e-19
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas] 80 1e-19
gb|AEL30359.1| RNA-directed DNA polymerase [Arachis hypogaea] 75 1e-18
ref|XP_006490008.1| PREDICTED: uncharacterized protein LOC102624... 74 8e-18
emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulga... 70 2e-17
gb|AAD15377.1| putative non-LTR retroelement reverse transcripta... 71 4e-17
gb|EOY30506.1| Uncharacterized protein TCM_037692 [Theobroma cacao] 80 8e-17
gb|EMJ13914.1| hypothetical protein PRUPE_ppa018769mg, partial [... 63 1e-16
gb|ABN08697.1| RNA-directed DNA polymerase ; Ribonuclease H, put... 91 1e-16
gb|EOY19200.1| Retrotransposon, unclassified-like protein [Theob... 73 3e-16
gb|EOY07997.1| Uncharacterized protein TCM_022315 [Theobroma cacao] 77 3e-16
>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1378
Score = 91.7 bits (226), Expect(3) = 2e-27
Identities = 40/105 (38%), Positives = 64/105 (60%)
Frame = -2
Query: 1291 GET*ARDYNFIIENIRNRLASWKTHFLNLAGRVTLAKSSLNSIPNHNMQYTFLSNVILRE 1112
G + R+Y ++++ I +LA WKT L++AGR TL +S+ +SIP + MQ T L +
Sbjct: 764 GRSSKREYQYLVDRINGKLAGWKTKTLSIAGRATLIQSAFSSIPYYTMQSTKLPRSTCDD 823
Query: 1111 IDRLQRNFIWESTSERTKIHFLKWSTLEQSKATGGLGLRSAKNKN 977
IDR R+F+W + ++H + W + +SK GGLG+RS + N
Sbjct: 824 IDRKSRSFLWGEQEGKRRVHLVAWENISKSKKEGGLGIRSMRQAN 868
Score = 48.1 bits (113), Expect(3) = 2e-27
Identities = 24/75 (32%), Positives = 40/75 (53%)
Frame = -1
Query: 1565 PINLHGKNIDFSHLIFADDITLMGKANIKTCEIIIHSLELFTQLSGQSINQNKFKIFFSK 1386
P+ S+L FADD+ L +A+++ +++ L+ F + SG +N++K KI+FS
Sbjct: 672 PVKASRNGPPISNLAFADDLILFSEASVEQAQVMKWCLDRFCEASGSKVNEDKSKIYFSA 731
Query: 1385 NCLEVISDICAKNLA 1341
N I D LA
Sbjct: 732 NTHLDIRDAVCNTLA 746
Score = 32.0 bits (71), Expect(3) = 2e-27
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -3
Query: 1359 LCKKLGMKIGTDFGKYLGFPILKGK 1285
+C L M+ DFGKYLG P + G+
Sbjct: 741 VCNTLAMEATADFGKYLGVPTINGR 765
>gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptase); Polynucleotidyl
transferase, Ribonuclease H fold [Medicago truncatula]
Length = 729
Score = 87.0 bits (214), Expect(2) = 1e-25
Identities = 40/105 (38%), Positives = 62/105 (59%)
Frame = -2
Query: 1291 GET*ARDYNFIIENIRNRLASWKTHFLNLAGRVTLAKSSLNSIPNHNMQYTFLSNVILRE 1112
G T +N II I+N+L+ WK L+LAGR+TL+K ++SIP ++MQY + I E
Sbjct: 188 GRTSRGHFNHIINKIQNKLSGWKQQCLSLAGRITLSKFVISSIPYYHMQYAKIPKTICDE 247
Query: 1111 IDRLQRNFIWESTSERTKIHFLKWSTLEQSKATGGLGLRSAKNKN 977
I+++QR F+W +++ K H + W K GGLG + + N
Sbjct: 248 IEKIQRGFVWGDSNQGRKAHLVSWDVCCLPKMNGGLGFKRPHHMN 292
Score = 58.2 bits (139), Expect(2) = 1e-25
Identities = 24/50 (48%), Positives = 37/50 (74%)
Frame = -1
Query: 1532 SHLIFADDITLMGKANIKTCEIIIHSLELFTQLSGQSINQNKFKIFFSKN 1383
SHL+FADD+ L +A+I+ ++H L++F Q SGQ IN+ K +++FSKN
Sbjct: 107 SHLLFADDLLLFAEASIEQAHCVLHCLDMFCQSSGQKINREKTQVYFSKN 156
>gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
[Medicago truncatula]
Length = 1296
Score = 97.8 bits (242), Expect(2) = 1e-24
Identities = 46/107 (42%), Positives = 70/107 (65%)
Frame = -2
Query: 1294 EGET*ARDYNFIIENIRNRLASWKTHFLNLAGRVTLAKSSLNSIPNHNMQYTFLSNVILR 1115
+G D+NFI+E ++ RLASWK LN GR+TLA S L++IP + MQ +L I
Sbjct: 759 QGRPKRSDFNFILEKMQTRLASWKNRLLNRTGRLTLATSVLSTIPTYYMQINWLPQNICD 818
Query: 1114 EIDRLQRNFIWESTSERTKIHFLKWSTLEQSKATGGLGLRSAKNKNL 974
ID+ RNF+W+ ++ + IH + W T+ + K+ GGLG+RSA++ N+
Sbjct: 819 SIDQTARNFLWKGSNNK-GIHLVNWKTITRPKSIGGLGIRSARDANI 864
Score = 43.9 bits (102), Expect(2) = 1e-24
Identities = 31/101 (30%), Positives = 47/101 (46%), Gaps = 7/101 (6%)
Frame = -1
Query: 1568 DPINLHGKNIDFSHLIFADDITLMGKANIKTCEIIIHSLELFTQLSGQSINQNKFKIFFS 1389
+PI++ SHL+FADD+ L KA + I + + F++ SG IN +K + ++S
Sbjct: 667 EPIHIINDGPQISHLLFADDVLLFTKAKSSQLQFITNLFDRFSRASGLKINISKSRAYYS 726
Query: 1388 K-------NCLEVISDICAKNLA*KLGLTLGNI*DFPF*RG 1287
N L IS I + TLG FP +G
Sbjct: 727 SGTPNGKINNLTAISGIQSTT-------TLGKYLGFPMLQG 760
>gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis cebennensis]
Length = 799
Score = 86.3 bits (212), Expect(3) = 5e-24
Identities = 41/95 (43%), Positives = 60/95 (63%)
Frame = -2
Query: 1261 IIENIRNRLASWKTHFLNLAGRVTLAKSSLNSIPNHNMQYTFLSNVILREIDRLQRNFIW 1082
I+ + +RLA WK L+LAGR+TL KS L+SIP H M L L DR+ ++F+W
Sbjct: 223 ILLRVSSRLAGWKGRMLSLAGRLTLTKSVLSSIPIHTMSTIALPKATLDGFDRISKSFVW 282
Query: 1081 ESTSERTKIHFLKWSTLEQSKATGGLGLRSAKNKN 977
S++E+ K H L W+ + +K GGLG+RS++ N
Sbjct: 283 GSSTEKKKQHLLAWNKIYCTKQAGGLGIRSSRAMN 317
Score = 48.1 bits (113), Expect(3) = 5e-24
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Frame = -1
Query: 1592 HQVDIC----K*DPINLHGKNIDFSHLIFADDITLMGKANIKTCEIIIHSLELFTQLSGQ 1425
HQ+D+ + PI++ SH+ FADD+ L +A++ ++ LE F SGQ
Sbjct: 108 HQIDLAVGTKEWKPISMSRGGPLLSHICFADDLILFAEASVAQIRVVRKVLEKFCIASGQ 167
Query: 1424 SINQNKFKIFFSKN 1383
++ K KIFFS+N
Sbjct: 168 KVSLEKSKIFFSQN 181
Score = 25.4 bits (54), Expect(3) = 5e-24
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -3
Query: 1362 YLCKKLGMKIGTDFGKYLGFPILK 1291
++ + G+K + GKYLG P+L+
Sbjct: 189 FISDESGIKSTKELGKYLGMPVLQ 212
>gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1231
Score = 89.0 bits (219), Expect(2) = 1e-23
Identities = 44/95 (46%), Positives = 59/95 (62%)
Frame = -2
Query: 1261 IIENIRNRLASWKTHFLNLAGRVTLAKSSLNSIPNHNMQYTFLSNVILREIDRLQRNFIW 1082
++E + RLA WK L+LAGR+TL K+ L+SIP H M L L +DR R F+W
Sbjct: 631 VLERVSARLAGWKGRSLSLAGRITLTKAVLSSIPVHVMSAILLPVSTLDTLDRYSRTFLW 690
Query: 1081 ESTSERTKIHFLKWSTLEQSKATGGLGLRSAKNKN 977
ST E+ K H L W + + KA GG+GLRSA++ N
Sbjct: 691 GSTMEKKKQHLLSWRKICKPKAEGGIGLRSARDMN 725
Score = 49.3 bits (116), Expect(2) = 1e-23
Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Frame = -1
Query: 1565 PINLHGKNIDFSHLIFADDITLMGKANIKTCEIIIHSLELFTQLSGQSINQNKFKIFFSK 1386
PI + SH+ FADD+ L +A++ II LE F + SGQ ++ K KIFFS
Sbjct: 529 PIAVSCGGSKLSHVCFADDLILFAEASVAQIRIIRRVLERFCEASGQKVSLEKSKIFFSH 588
Query: 1385 NCLEVISDI--------CAKNLA*KLGLTL 1320
N + + C K L LG+ +
Sbjct: 589 NVSREMEQLISEESGIGCTKELGKYLGMPI 618
>gb|AAD37021.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
thaliana]
Length = 732
Score = 84.7 bits (208), Expect(2) = 1e-22
Identities = 40/95 (42%), Positives = 60/95 (63%)
Frame = -2
Query: 1261 IIENIRNRLASWKTHFLNLAGRVTLAKSSLNSIPNHNMQYTFLSNVILREIDRLQRNFIW 1082
I+E + RLA WK FL+LAGRVTL K+ L+SIP H M L L +D++ R+F+W
Sbjct: 293 ILEKLTTRLAGWKGRFLSLAGRVTLTKAVLSSIPVHTMSTIALPKSTLDGLDKVSRSFLW 352
Query: 1081 ESTSERTKIHFLKWSTLEQSKATGGLGLRSAKNKN 977
S+ + K H + W + + ++ GGLG+R A++ N
Sbjct: 353 GSSVTQRKQHLISWKRVCKPRSEGGLGIRKAQDMN 387
Score = 50.4 bits (119), Expect(2) = 1e-22
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 4/87 (4%)
Frame = -1
Query: 1565 PINLHGKNIDFSHLIFADDITLMGKANIKTCEIIIHSLELFTQLSGQSINQNKFKIFFSK 1386
PI+L SH+ FADD+ L +A++ +I LE F SGQ ++ K KIFFS+
Sbjct: 191 PISLSQGGPKLSHICFADDLILFAEASVAQIRVIRRVLERFCVASGQKVSLEKSKIFFSE 250
Query: 1385 NCL----EVISDICAKNLA*KLGLTLG 1317
N ++ISD + +LG LG
Sbjct: 251 NVSRDLGKLISDESGISSTRELGKYLG 277
>emb|CAB78008.1| putative protein [Arabidopsis thaliana] gi|7321072|emb|CAB82119.1|
putative protein [Arabidopsis thaliana]
Length = 947
Score = 77.4 bits (189), Expect(2) = 1e-20
Identities = 38/95 (40%), Positives = 58/95 (61%)
Frame = -2
Query: 1261 IIENIRNRLASWKTHFLNLAGRVTLAKSSLNSIPNHNMQYTFLSNVILREIDRLQRNFIW 1082
++E + +RLA WK L+ AGR+TL KS L+ IP H M L L +D+L R F+
Sbjct: 445 VLERVSSRLAGWKGRSLSFAGRLTLTKSVLSLIPIHTMSTISLPQSTLEGLDKLARVFLL 504
Query: 1081 ESTSERTKIHFLKWSTLEQSKATGGLGLRSAKNKN 977
S++E+ K+H + W + K+ GGLG+R++K N
Sbjct: 505 GSSAEKKKLHLVAWDRVCLPKSEGGLGIRTSKCMN 539
Score = 50.8 bits (120), Expect(2) = 1e-20
Identities = 28/78 (35%), Positives = 40/78 (51%)
Frame = -1
Query: 1532 SHLIFADDITLMGKANIKTCEIIIHSLELFTQLSGQSINQNKFKIFFSKNCLEVISDICA 1353
SH+ FADD+ L +A++ +I LE F SGQ ++ +K KIFFSKN + + +
Sbjct: 354 SHICFADDLILFAEASVSQIRVIRRILETFCIASGQKVSLDKSKIFFSKNVSRDLEKLIS 413
Query: 1352 KNLA*KLGLTLGNI*DFP 1299
K K LG P
Sbjct: 414 KESGIKSTRELGKYLGMP 431
>emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis thaliana]
gi|7268307|emb|CAB78601.1| reverse transcriptase like
protein [Arabidopsis thaliana]
Length = 929
Score = 95.1 bits (235), Expect(3) = 1e-19
Identities = 43/95 (45%), Positives = 64/95 (67%)
Frame = -2
Query: 1261 IIENIRNRLASWKTHFLNLAGRVTLAKSSLNSIPNHNMQYTFLSNVILREIDRLQRNFIW 1082
++E + +RL+ WK+ L+LAGR+TL K+ L SIP H M L +L ++D++ RNF+W
Sbjct: 566 VLERVSSRLSGWKSRSLSLAGRITLTKAVLMSIPIHTMSSILLPASLLEQLDKVSRNFLW 625
Query: 1081 ESTSERTKIHFLKWSTLEQSKATGGLGLRSAKNKN 977
ST E+ K H L W + + KA GGLGLR++K+ N
Sbjct: 626 GSTVEKRKQHLLSWKKVCRPKAAGGLGLRASKDMN 660
Score = 28.1 bits (61), Expect(3) = 1e-19
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = -1
Query: 1532 SHLIFADDITLMGKANIKTCEIIIHSLELFTQLSGQSINQNKFKIFFSKN 1383
SH+ FADD+ L +A++ Q ++ K KIFFS N
Sbjct: 492 SHVCFADDLILFAEASV-----------------AQKVSLEKSKIFFSNN 524
Score = 21.9 bits (45), Expect(3) = 1e-19
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -3
Query: 1326 DFGKYLGFPILK 1291
+ GKYLG P+L+
Sbjct: 544 ELGKYLGMPVLQ 555
>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
Length = 1898
Score = 80.5 bits (197), Expect(2) = 1e-19
Identities = 37/98 (37%), Positives = 60/98 (61%)
Frame = -2
Query: 1270 YNFIIENIRNRLASWKTHFLNLAGRVTLAKSSLNSIPNHNMQYTFLSNVILREIDRLQRN 1091
+N +I+ +R +L+SWK LN+AGR L ++SL ++P + MQ L EID+ RN
Sbjct: 1301 FNAVIDKMRTKLSSWKASSLNMAGRRVLVQASLATVPTYTMQVMALPVSTCNEIDKTCRN 1360
Query: 1090 FIWESTSERTKIHFLKWSTLEQSKATGGLGLRSAKNKN 977
F+W + K+H + W+ + + + GGLGLR A++ N
Sbjct: 1361 FLWGHDTNTRKLHSVNWAEICKPRNEGGLGLRMARDFN 1398
Score = 44.7 bits (104), Expect(2) = 1e-19
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Frame = -1
Query: 1565 PINLHGKNIDFSHLIFADDITLMGKANIKTCEIIIHSLELFTQLSGQSINQNKFKIFFSK 1386
P+++ SHL FADD+ L G+A+ +I+ L+ F+ SG +N +K +F S
Sbjct: 1202 PVHITRGGTGISHLFFADDLMLFGEASEHQAQIMFDCLDSFSDASGLKVNFSKSLLFCSS 1261
Query: 1385 N----CLEVISDICAKNLA*KLGLTLG 1317
N I I +A LG LG
Sbjct: 1262 NVNAGLKRAIGSILQVPVAESLGTYLG 1288
>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 80.5 bits (197), Expect(2) = 1e-19
Identities = 37/98 (37%), Positives = 60/98 (61%)
Frame = -2
Query: 1270 YNFIIENIRNRLASWKTHFLNLAGRVTLAKSSLNSIPNHNMQYTFLSNVILREIDRLQRN 1091
+N +I+ +R +L+SWK LN+AGR L ++SL ++P + MQ L EID+ RN
Sbjct: 769 FNAVIDKMRTKLSSWKASSLNMAGRRVLVQASLATVPTYTMQVMALPVSTCNEIDKTCRN 828
Query: 1090 FIWESTSERTKIHFLKWSTLEQSKATGGLGLRSAKNKN 977
F+W + K+H + W+ + + + GGLGLR A++ N
Sbjct: 829 FLWGHDTNTRKLHSVNWAEICKPRNEGGLGLRMARDFN 866
Score = 44.7 bits (104), Expect(2) = 1e-19
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Frame = -1
Query: 1565 PINLHGKNIDFSHLIFADDITLMGKANIKTCEIIIHSLELFTQLSGQSINQNKFKIFFSK 1386
P+++ SHL FADD+ L G+A+ +I+ L+ F+ SG +N +K +F S
Sbjct: 670 PVHITRGGTGISHLFFADDLMLFGEASEHQAQIMFDCLDSFSNASGLKVNFSKSLLFCSS 729
Query: 1385 N----CLEVISDICAKNLA*KLGLTLG 1317
N I I +A LG LG
Sbjct: 730 NVNAGLKRAIGSILQVPVAESLGTYLG 756
>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 80.5 bits (197), Expect(2) = 1e-19
Identities = 37/98 (37%), Positives = 60/98 (61%)
Frame = -2
Query: 1270 YNFIIENIRNRLASWKTHFLNLAGRVTLAKSSLNSIPNHNMQYTFLSNVILREIDRLQRN 1091
+N +I+ +R +L+SWK LN+AGR L ++SL ++P + MQ L EID+ RN
Sbjct: 769 FNAVIDKMRTKLSSWKASSLNMAGRRVLVQASLATVPTYTMQVMALPVSTCNEIDKTCRN 828
Query: 1090 FIWESTSERTKIHFLKWSTLEQSKATGGLGLRSAKNKN 977
F+W + K+H + W+ + + + GGLGLR A++ N
Sbjct: 829 FLWGHDTNTRKLHSVNWAEICKPRNEGGLGLRMARDFN 866
Score = 44.7 bits (104), Expect(2) = 1e-19
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Frame = -1
Query: 1565 PINLHGKNIDFSHLIFADDITLMGKANIKTCEIIIHSLELFTQLSGQSINQNKFKIFFSK 1386
P+++ SHL FADD+ L G+A+ +I+ L+ F+ SG +N +K +F S
Sbjct: 670 PVHITRGGTGISHLFFADDLMLFGEASEHQAQIMFDCLDSFSNASGLKVNFSKSLLFCSS 729
Query: 1385 N----CLEVISDICAKNLA*KLGLTLG 1317
N I I +A LG LG
Sbjct: 730 NVNAGLKRAIGSILQVPVAESLGTYLG 756
>gb|AEL30359.1| RNA-directed DNA polymerase [Arachis hypogaea]
Length = 1613
Score = 74.7 bits (182), Expect(2) = 1e-18
Identities = 34/100 (34%), Positives = 57/100 (57%)
Frame = -2
Query: 1270 YNFIIENIRNRLASWKTHFLNLAGRVTLAKSSLNSIPNHNMQYTFLSNVILREIDRLQRN 1091
+N +++ IR+RLASWK LN AGR+ L + +IP + MQ + I+ +++ + RN
Sbjct: 1098 FNGVLDKIRSRLASWKGSLLNRAGRLCLVNFVVAAIPTYQMQVSIFPKGIISKLESMMRN 1157
Query: 1090 FIWESTSERTKIHFLKWSTLEQSKATGGLGLRSAKNKNLT 971
F+W+ + ++ + W L K GGLG+R N+T
Sbjct: 1158 FLWKGQVDGRGLNLVSWKVLVTPKKYGGLGIRDPYCVNIT 1197
Score = 47.0 bits (110), Expect(2) = 1e-18
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 8/101 (7%)
Frame = -1
Query: 1592 HQVDICK*DPINLHGKNIDFSHLIFADDITLMGKANIKTCEIIIHSLELFTQLSGQSINQ 1413
HQVD+ +P+ + SHL+FADD+ L KA + + ++ LE F + G IN
Sbjct: 990 HQVDLGLWEPVAISRGGPRISHLMFADDLLLFCKATKRQVQNVMLVLETFCKAYGMKINV 1049
Query: 1412 NKFKIFFSKNC--------LEVISDICAKNLA*KLGLTLGN 1314
K K SKN + S I ++L LG+TL +
Sbjct: 1050 EKSKALCSKNVSATRKEVFTGISSIIFVQDLGKYLGVTLSH 1090
>ref|XP_006490008.1| PREDICTED: uncharacterized protein LOC102624085 [Citrus sinensis]
Length = 1635
Score = 73.6 bits (179), Expect(3) = 8e-18
Identities = 37/92 (40%), Positives = 52/92 (56%)
Frame = -2
Query: 1270 YNFIIENIRNRLASWKTHFLNLAGRVTLAKSSLNSIPNHNMQYTFLSNVILREIDRLQRN 1091
Y I++ I RL+ W L LAGR+TLA+S L +I + MQ T L I +ID+L R
Sbjct: 1261 YQSIVDKIDQRLSGWNASHLTLAGRITLAQSVLQAISVYAMQTTKLPRSIKMKIDQLCRR 1320
Query: 1090 FIWESTSERTKIHFLKWSTLEQSKATGGLGLR 995
FIW ++E K+ + W + K GGLG +
Sbjct: 1321 FIWSGSAEHQKMSLVNWDMICTPKCKGGLGFK 1352
Score = 42.7 bits (99), Expect(3) = 8e-18
Identities = 21/61 (34%), Positives = 34/61 (55%)
Frame = -1
Query: 1565 PINLHGKNIDFSHLIFADDITLMGKANIKTCEIIIHSLELFTQLSGQSINQNKFKIFFSK 1386
PI L SHL FADD+ + +A+ + II ++ F+ SG +N++K ++FS
Sbjct: 1162 PIRLARMGTPLSHLFFADDLLFLSEASSQQAIIINKIIDEFSASSGAKVNKSKTLVYFSA 1221
Query: 1385 N 1383
N
Sbjct: 1222 N 1222
Score = 22.3 bits (46), Expect(3) = 8e-18
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -3
Query: 1347 LGMKIGTDFGKYLGFPI 1297
LG + + GKYLG P+
Sbjct: 1235 LGYSVTDNLGKYLGVPL 1251
>emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1363
Score = 70.1 bits (170), Expect(3) = 2e-17
Identities = 32/100 (32%), Positives = 55/100 (55%)
Frame = -2
Query: 1273 DYNFIIENIRNRLASWKTHFLNLAGRVTLAKSSLNSIPNHNMQYTFLSNVILREIDRLQR 1094
DY+ ++E +++ + W+ +LN+AGR TL KS ++S P + MQ + L ++ EI++ R
Sbjct: 767 DYDGLLEKVKSAINGWQAKYLNMAGRCTLIKSVVSSFPVYGMQSSLLPVSVMNEIEKDCR 826
Query: 1093 NFIWESTSERTKIHFLKWSTLEQSKATGGLGLRSAKNKNL 974
F+W + + + W + GGLG R N NL
Sbjct: 827 KFLWNKMDKSHYLARMSWDRICSPTGKGGLGFRRLHNWNL 866
Score = 39.3 bits (90), Expect(3) = 2e-17
Identities = 19/58 (32%), Positives = 34/58 (58%)
Frame = -1
Query: 1565 PINLHGKNIDFSHLIFADDITLMGKANIKTCEIIIHSLELFTQLSGQSINQNKFKIFF 1392
PI + ++ SH+ +ADD+ L G+A+++ +I + LE F +SG +N +K F
Sbjct: 670 PIKI-SSDLGVSHIFYADDVFLFGQASVRNGGVIQNVLEEFGNISGLRVNMSKSLAIF 726
Score = 28.1 bits (61), Expect(3) = 2e-17
Identities = 15/25 (60%), Positives = 15/25 (60%)
Frame = -3
Query: 1347 LGMKIGTDFGKYLGFPILKGKPRPG 1273
L MK T FGKYLG IL K R G
Sbjct: 742 LTMKGSTSFGKYLGCNILPNKLRRG 766
>gb|AAD15377.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1044
Score = 70.9 bits (172), Expect(3) = 4e-17
Identities = 33/98 (33%), Positives = 57/98 (58%)
Frame = -2
Query: 1270 YNFIIENIRNRLASWKTHFLNLAGRVTLAKSSLNSIPNHNMQYTFLSNVILREIDRLQRN 1091
+N I++ IR R SW + FL+ AG+ T+ KS L S+P + M L + + I +
Sbjct: 591 FNQIVDRIRQRSLSWSSRFLSTAGKTTMLKSVLASMPTYTMSCFKLLVSLCKRIQSALTH 650
Query: 1090 FIWESTSERTKIHFLKWSTLEQSKATGGLGLRSAKNKN 977
F W+S++++ K+ ++ WS + ++K GGLG + N N
Sbjct: 651 FWWDSSADKKKMCWIAWSKMAKNKKEGGLGFKDITNFN 688
Score = 42.4 bits (98), Expect(3) = 4e-17
Identities = 18/49 (36%), Positives = 33/49 (67%)
Frame = -1
Query: 1532 SHLIFADDITLMGKANIKTCEIIIHSLELFTQLSGQSINQNKFKIFFSK 1386
+HL+FADD ++++K+C+ + L+ + + SGQ IN++K I FS+
Sbjct: 503 NHLLFADDTIFFCRSDLKSCKTFLCILKKYEEASGQMINKSKSAITFSR 551
Score = 23.1 bits (48), Expect(3) = 4e-17
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -3
Query: 1347 LGMKIGTDFGKYLGFPILKGKPR 1279
LG+++ GKYLG P + G+ +
Sbjct: 565 LGIQLVGGLGKYLGLPKMFGRKK 587
>gb|EOY30506.1| Uncharacterized protein TCM_037692 [Theobroma cacao]
Length = 475
Score = 80.1 bits (196), Expect(2) = 8e-17
Identities = 39/98 (39%), Positives = 58/98 (59%)
Frame = -2
Query: 1270 YNFIIENIRNRLASWKTHFLNLAGRVTLAKSSLNSIPNHNMQYTFLSNVILREIDRLQRN 1091
+ ++ E I NRL+SWK L+ AGR+TL KS L IP++ MQ + +I+ RN
Sbjct: 285 FKYLEEKICNRLSSWKASALSFAGRLTLVKSILLYIPSYAMQTVAIPEKTREKIEMHCRN 344
Query: 1090 FIWESTSERTKIHFLKWSTLEQSKATGGLGLRSAKNKN 977
F+W+ S+ KIH +KW + + K GGLG+R + N
Sbjct: 345 FLWDGDSKARKIHAMKWKNMCRPKEEGGLGIRCMRKMN 382
Score = 35.4 bits (80), Expect(2) = 8e-17
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Frame = -1
Query: 1529 HLIFADDITLMGKANIKTCEIIIHSLELFTQLSGQSINQNKFKIFFSKN----CLEVISD 1362
HL F DD+ L +A + ++I F + S + +N K +FSKN + IS+
Sbjct: 198 HLFFVDDLILFAEALVPRMDVIKGVSNHFRKYSDEKVNVEKTSFYFSKNVGMDIIHAISE 257
Query: 1361 ICAKNLA*KLGLTLG 1317
+ + LG LG
Sbjct: 258 CSGFSHSTNLGKYLG 272
>gb|EMJ13914.1| hypothetical protein PRUPE_ppa018769mg, partial [Prunus persica]
Length = 387
Score = 62.8 bits (151), Expect(2) = 1e-16
Identities = 30/82 (36%), Positives = 44/82 (53%)
Frame = -2
Query: 1270 YNFIIENIRNRLASWKTHFLNLAGRVTLAKSSLNSIPNHNMQYTFLSNVILREIDRLQRN 1091
Y ++ ++N L WK+ L+LAGR TL +S +SIP + MQ L + +DR+ N
Sbjct: 140 YGGLVNKVQNCLTLWKSKHLSLAGRATLIQSVTSSIPVYTMQTAKLPVSVCNALDRINCN 199
Query: 1090 FIWESTSERTKIHFLKWSTLEQ 1025
F W T KIH W +E+
Sbjct: 200 FFWGGTENNHKIHLYGWWDIER 221
Score = 52.4 bits (124), Expect(2) = 1e-16
Identities = 32/76 (42%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Frame = -1
Query: 1532 SHLIFADDITLMGKANIKTCEIIIHSLELFTQLSGQSINQNKFKIFFSKNCLEV----IS 1365
SHL FADD+ L +A+ K +I+ LE F +SGQ++N +K IF S N V +S
Sbjct: 52 SHLFFADDLVLFAEASTKQAQIMRDCLEKFCSVSGQAVNFDKSAIFCSPNTGNVLAQDLS 111
Query: 1364 DICAKNLA*KLGLTLG 1317
IC L LG LG
Sbjct: 112 RICGSPLTANLGNYLG 127
>gb|ABN08697.1| RNA-directed DNA polymerase ; Ribonuclease H, putative [Medicago
truncatula]
Length = 291
Score = 90.5 bits (223), Expect(2) = 1e-16
Identities = 46/105 (43%), Positives = 63/105 (60%)
Frame = -2
Query: 1291 GET*ARDYNFIIENIRNRLASWKTHFLNLAGRVTLAKSSLNSIPNHNMQYTFLSNVILRE 1112
G + D+N IIE ++ RLASW LN GRVTLA S L+SIP + MQ +L I
Sbjct: 49 GRSKRSDFNLIIEKMQARLASWNNKLLNRTGRVTLATSVLSSIPTYYMQINWLPQNICDS 108
Query: 1111 IDRLQRNFIWESTSERTKIHFLKWSTLEQSKATGGLGLRSAKNKN 977
ID RNF+W+ T + IH + W + + K GGLG++SA++ N
Sbjct: 109 IDHTTRNFVWKGTDNK-GIHLVNWQKVTKPKHMGGLGIQSARDAN 152
Score = 24.3 bits (51), Expect(2) = 1e-16
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -3
Query: 1329 TDFGKYLGFPILKGKPR 1279
T KYLGFP+L G+ +
Sbjct: 36 TSLEKYLGFPMLHGRSK 52
>gb|EOY19200.1| Retrotransposon, unclassified-like protein [Theobroma cacao]
Length = 1368
Score = 73.2 bits (178), Expect(2) = 3e-16
Identities = 34/105 (32%), Positives = 62/105 (59%)
Frame = -2
Query: 1297 FEGET*ARDYNFIIENIRNRLASWKTHFLNLAGRVTLAKSSLNSIPNHNMQYTFLSNVIL 1118
F+G ++ +I IR R+ W+ L+ GR+TL +S L+S+P + +Q ++
Sbjct: 723 FKGPKKVMLFDSLINKIRERITGWENKILSPGGRITLLRSVLSSMPIYLLQVLKPPACVI 782
Query: 1117 REIDRLQRNFIWESTSERTKIHFLKWSTLEQSKATGGLGLRSAKN 983
++I+RL +F+W S+ + T+IH+ W + + GGLG+RS K+
Sbjct: 783 QKIERLFNSFLWGSSMDSTRIHWTAWHNITFPSSEGGLGIRSLKD 827
Score = 40.4 bits (93), Expect(2) = 3e-16
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Frame = -1
Query: 1562 INLH---GKNIDFSHLIFADDITLMGKANIKTCEIIIHSLELFTQLSGQSINQNK 1407
I+LH G +++ SHL FADDI + + E I+ L+ + Q+SGQ +N K
Sbjct: 631 ISLHYHSGCSLNISHLAFADDIMIFTNGSKSVLEKILEFLQEYEQISGQRVNHQK 685
>gb|EOY07997.1| Uncharacterized protein TCM_022315 [Theobroma cacao]
Length = 667
Score = 77.0 bits (188), Expect(2) = 3e-16
Identities = 34/95 (35%), Positives = 59/95 (62%)
Frame = -2
Query: 1261 IIENIRNRLASWKTHFLNLAGRVTLAKSSLNSIPNHNMQYTFLSNVILREIDRLQRNFIW 1082
IIE RLA WK L++ GRV L +S L+S+P M + +++E+++++R F+W
Sbjct: 219 IIEKFETRLAGWKAKTLSIGGRVALLRSVLSSLPIFYMSIFQIPKRVIKELEKIERRFLW 278
Query: 1081 ESTSERTKIHFLKWSTLEQSKATGGLGLRSAKNKN 977
+ ++ KIH+++WS + K GGLG+ + + KN
Sbjct: 279 CGSEKKQKIHYIEWSKVCNYKENGGLGIINMEVKN 313
Score = 36.6 bits (83), Expect(2) = 3e-16
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
Frame = -1
Query: 1586 VDICK*DPINLHGKNIDFSHLIFADDITLMGKANIKTCEIIIHSLELFTQLSGQSINQNK 1407
V +CK PI L G I SHL FADD + K+ I++ L F +SG IN +K
Sbjct: 113 VGLCKGIPIGLRGLRI--SHLQFADDTMIFLKSEIESLVNAKRILRCFQAISGLRINFHK 170
Query: 1406 FKIF-------FSKNCLEVIS 1365
+ F + C E I+
Sbjct: 171 SSLAGIGTNENFVRECAERIN 191