BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00031428
         (899 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT38744.1| Putative gag-pol polyprotein, identical [Solanum ...   139   1e-30
gb|AAT38724.1| Putative retrotransposon protein, identical [Sola...   138   2e-30
gb|AAT39297.2| Gag-pol protein, putative [Solanum demissum]           125   3e-26
gb|ABI34354.1| Retrotransposon gag protein [Solanum demissum]         120   5e-25
gb|AAV31171.1| Putative polyprotein, identical [Solanum tuberosum]    117   8e-24
ref|XP_006358737.1| PREDICTED: uncharacterized protein LOC102605...   109   1e-21
ref|XP_006364939.1| PREDICTED: uncharacterized protein LOC102581...   103   6e-20
gb|AAP43916.1| integrase [Gossypium herbaceum]                         85   4e-14
ref|XP_004248998.1| PREDICTED: uncharacterized protein LOC101264...    82   4e-13
gb|EOY08659.1| DNA/RNA polymerases superfamily protein [Theobrom...    80   1e-12
ref|XP_006356881.1| PREDICTED: uncharacterized protein LOC102603...    79   2e-12
gb|EOY00215.1| DNA/RNA polymerases superfamily protein [Theobrom...    77   9e-12
ref|XP_006352152.1| PREDICTED: uncharacterized protein LOC102604...    77   1e-11
dbj|BAL46523.1| hypothetical protein [Gentiana scabra x Gentiana...    74   1e-10
emb|CAN61139.1| hypothetical protein VITISV_009489 [Vitis vinifera]    72   2e-10
gb|EOY14099.1| DNA/RNA polymerases superfamily protein [Theobrom...    71   5e-10
gb|AAM08802.1|AC090486_12 putative retroelement [Oryza sativa Ja...    70   8e-10
gb|AAX96433.1| retrotransposon protein, putative, Ty3-gypsy sub-...    70   1e-09
gb|AAX95143.1| retrotransposon protein, putative, Ty3-gypsy sub-...    69   2e-09
gb|AAV31278.1| putative polyprotein [Oryza sativa Japonica Group]      69   2e-09

>gb|AAT38744.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1515

 Score =  139 bits (351), Expect = 1e-30
 Identities = 91/225 (40%), Positives = 122/225 (54%), Gaps = 5/225 (2%)
 Frame = -3

Query: 750  KRTTVR*IHHLANLGV*PLDSEDGGVVVQTKAYSSLVAEMKKKQFNDPYLQQLKEGINKH 571
            +R   + +H LA LGV   DS +GG+ V +KA SSL++E+K+KQ  DP L +LK  + K 
Sbjct: 1081 RRELAKDMHRLACLGVRFTDSTEGGIAVTSKAESSLMSEVKEKQDQDPILLELKANVQKQ 1140

Query: 570  KTMTFEQWGDNGTLSYQGRLCFPMWMDL-ERGSCQKHTILGIPFTRI*KKYHNLKEIYWW 394
            + + FEQ GD G L YQGRLC PM   L ER   + H+          K Y +L+E YWW
Sbjct: 1141 RVLAFEQGGD-GVLRYQGRLCVPMVDGLQERVMEEAHSSRYSVHPGSTKMYRDLREFYWW 1199

Query: 393  DDIKKNIADFMAKYPNCQQ--CTRGPVAWLRISIFSCEYER*XXXXX*HVYLTHFGNMI* 220
            + +KK IA+F+AK PNCQQ          L  +I   E++           L        
Sbjct: 1200 NGMKKGIAEFVAKCPNCQQVKVEHQRPGGLAQNIELPEWKWEMINMDFITGLPRSRRQHD 1259

Query: 219  FEWLWTDLLVNT--LFPIRATISARDYAKLYI*EIIRFHGTPMSI 91
              W+  D +  +    P+R T SA DYAKLYI EI+R HG P+SI
Sbjct: 1260 SIWVIVDRMTKSAHFLPVRTTHSAEDYAKLYIQEIVRLHGVPISI 1304



 Score = 91.3 bits (225), Expect = 4e-16
 Identities = 67/176 (38%), Positives = 96/176 (54%), Gaps = 10/176 (5%)
 Frame = -2

Query: 517  KIMFPDVDGLRKRIMSEAHNSRYSIHPDLKKIP*SQGDLLVGRHQKEH-SRFYGQV---S 350
            ++  P VDGL++R+M EAH+SRYS+HP   K+     +       K+  + F  +     
Sbjct: 1158 RLCVPMVDGLQERVMEEAHSSRYSVHPGSTKMYRDLREFYWWNGMKKGIAEFVAKCPNCQ 1217

Query: 349  KLSAMHQRPRGLA*NIDILV*I*EMIDIDFITCLPHAFRKHDLI*VVVDRLTSQHTF--- 179
            ++   HQRP GLA NI++     EMI++DFIT LP + R+HD I V+VDR+T    F   
Sbjct: 1218 QVKVEHQRPGGLAQNIELPEWKWEMINMDFITGLPRSRRQHDSIWVIVDRMTKSAHFLPV 1277

Query: 178  --SNKGHNFSKGLCQ-VVYLRNHQISWDSDVHFLDHVAQFTIIFLKFLQKGLGKRV 20
              ++   +++K   Q +V L    IS  S     D  AQFT  F K  QKGLG +V
Sbjct: 1278 RTTHSAEDYAKLYIQEIVRLHGVPISIIS-----DRGAQFTAQFWKSFQKGLGSKV 1328


>gb|AAT38724.1| Putative retrotransposon protein, identical [Solanum demissum]
          Length = 1602

 Score =  138 bits (348), Expect = 2e-30
 Identities = 90/225 (40%), Positives = 122/225 (54%), Gaps = 5/225 (2%)
 Frame = -3

Query: 750  KRTTVR*IHHLANLGV*PLDSEDGGVVVQTKAYSSLVAEMKKKQFNDPYLQQLKEGINKH 571
            +R   + +H LA LGV   DS +GG+ V +KA SSL++E+K+KQ  DP L +LK  + K 
Sbjct: 1087 RRELAKDMHRLACLGVRFTDSTEGGIAVTSKAESSLMSEVKEKQDQDPILLELKANVQKQ 1146

Query: 570  KTMTFEQWGDNGTLSYQGRLCFPMWMDL-ERGSCQKHTILGIPFTRI*KKYHNLKEIYWW 394
            + + FEQ GD G L YQGRLC PM   L ER   + H+          K Y +L+E YWW
Sbjct: 1147 RVLAFEQGGD-GVLRYQGRLCVPMVDGLQERVMEEAHSSRYSVHPGSTKMYRDLREFYWW 1205

Query: 393  DDIKKNIADFMAKYPNCQQ--CTRGPVAWLRISIFSCEYER*XXXXX*HVYLTHFGNMI* 220
            + +KK IA+F+AK PNCQQ          L  +I   E++           L        
Sbjct: 1206 NGMKKGIAEFVAKCPNCQQVKVEHQRPGGLAQNIELPEWKWEMINMDFITGLPRSRRQHD 1265

Query: 219  FEWLWTDLLVNT--LFPIRATISARDYAKLYI*EIIRFHGTPMSI 91
              W+  D +  +    P++ T SA DYAKLYI EI+R HG P+SI
Sbjct: 1266 SIWVIVDRMTKSAHFLPVKTTHSAEDYAKLYIQEIVRLHGVPISI 1310



 Score = 91.3 bits (225), Expect = 4e-16
 Identities = 67/176 (38%), Positives = 96/176 (54%), Gaps = 10/176 (5%)
 Frame = -2

Query: 517  KIMFPDVDGLRKRIMSEAHNSRYSIHPDLKKIP*SQGDLLVGRHQKEH-SRFYGQV---S 350
            ++  P VDGL++R+M EAH+SRYS+HP   K+     +       K+  + F  +     
Sbjct: 1164 RLCVPMVDGLQERVMEEAHSSRYSVHPGSTKMYRDLREFYWWNGMKKGIAEFVAKCPNCQ 1223

Query: 349  KLSAMHQRPRGLA*NIDILV*I*EMIDIDFITCLPHAFRKHDLI*VVVDRLTSQHTF--- 179
            ++   HQRP GLA NI++     EMI++DFIT LP + R+HD I V+VDR+T    F   
Sbjct: 1224 QVKVEHQRPGGLAQNIELPEWKWEMINMDFITGLPRSRRQHDSIWVIVDRMTKSAHFLPV 1283

Query: 178  --SNKGHNFSKGLCQ-VVYLRNHQISWDSDVHFLDHVAQFTIIFLKFLQKGLGKRV 20
              ++   +++K   Q +V L    IS  S     D  AQFT  F K  QKGLG +V
Sbjct: 1284 KTTHSAEDYAKLYIQEIVRLHGVPISIIS-----DRGAQFTAQFWKSFQKGLGSKV 1334


>gb|AAT39297.2| Gag-pol protein, putative [Solanum demissum]
          Length = 1554

 Score =  125 bits (313), Expect = 3e-26
 Identities = 80/203 (39%), Positives = 111/203 (54%), Gaps = 7/203 (3%)
 Frame = -3

Query: 678  GVVVQTKAYSSLVAEMKKKQFNDPYLQQLKEGINKHKTMTFEQWGDNGTLSYQGRLCFPM 499
            G+ V  +A SSLV+E+K+KQ  DP   + K  + K + + FEQ GD G L YQGRLC PM
Sbjct: 1111 GIAVANRAESSLVSEVKEKQDQDPIFLEFKANVQKQRVLAFEQGGD-GVLRYQGRLCVPM 1169

Query: 498  WMDL-ERGSCQKHTILGIPFTRI*KKYHNLKEIYWWDDIKKNIADFMAKYPNCQQCT--- 331
               L ER   + H+          K YH+L+E+YWW+ +KK IA+F+AK PNCQQ     
Sbjct: 1170 VDGLQERIMEEAHSSRYSIHPGSTKMYHDLREVYWWNGMKKGIAEFVAKCPNCQQVKVEH 1229

Query: 330  RGPVAWL-RISIFSCEYER*XXXXX*HVYLTHFGNMI*FEWLWTDLLVNT--LFPIRATI 160
            + PV    RI +   ++E         +  +H        W+  D +  +    P+R T 
Sbjct: 1230 QRPVGLAQRIKLPEWKWEMINMDFITGLPKSH--RQHDSIWVIVDQMTKSAHFLPVRTTN 1287

Query: 159  SARDYAKLYI*EIIRFHGTPMSI 91
             A DYAKLY+ EI+R HG P+SI
Sbjct: 1288 IAEDYAKLYVQEIVRLHGIPISI 1310



 Score = 86.7 bits (213), Expect = 1e-14
 Identities = 67/176 (38%), Positives = 95/176 (53%), Gaps = 10/176 (5%)
 Frame = -2

Query: 517  KIMFPDVDGLRKRIMSEAHNSRYSIHPDLKKIP*SQGDLLVGRHQKEH-SRFYGQV---S 350
            ++  P VDGL++RIM EAH+SRYSIHP   K+     ++      K+  + F  +     
Sbjct: 1164 RLCVPMVDGLQERIMEEAHSSRYSIHPGSTKMYHDLREVYWWNGMKKGIAEFVAKCPNCQ 1223

Query: 349  KLSAMHQRPRGLA*NIDILV*I*EMIDIDFITCLPHAFRKHDLI*VVVDRLTSQHTF--- 179
            ++   HQRP GLA  I +     EMI++DFIT LP + R+HD I V+VD++T    F   
Sbjct: 1224 QVKVEHQRPVGLAQRIKLPEWKWEMINMDFITGLPKSHRQHDSIWVIVDQMTKSAHFLPV 1283

Query: 178  --SNKGHNFSKGLCQ-VVYLRNHQISWDSDVHFLDHVAQFTIIFLKFLQKGLGKRV 20
              +N   +++K   Q +V L    IS  S     D  AQFT  F K  +KGLG +V
Sbjct: 1284 RTTNIAEDYAKLYVQEIVRLHGIPISIIS-----DRGAQFTAQFWKSFKKGLGSKV 1334


>gb|ABI34354.1| Retrotransposon gag protein [Solanum demissum]
          Length = 4543

 Score =  120 bits (302), Expect = 5e-25
 Identities = 81/217 (37%), Positives = 112/217 (51%), Gaps = 7/217 (3%)
 Frame = -3

Query: 750  KRTTVR*IHHLANLGV*PLDSEDGGVVVQTKAYSSLVAEMKKKQFNDPYLQQLKEGINKH 571
            +R   + +H LA LGV   DS  GG+ V  +A SSLV E+KKKQ  DP L +LK  + K 
Sbjct: 863  RRELTKDVHRLACLGVRFTDSAKGGIAVANRAESSLVLEVKKKQDQDPILLELKANVQKQ 922

Query: 570  KTMTFEQWGDNGTLSYQGRLCFPMWMDLERGSCQK-HTILGIPFTRI*KKYHNLKEIYWW 394
            + + FEQ GD G L YQGRLC PM   L+    ++ H+          K Y +L+E+YWW
Sbjct: 923  RVLAFEQGGD-GALRYQGRLCVPMVDGLQEKIMEEAHSSRYSVHPGSTKMYRDLREVYWW 981

Query: 393  DDIKKNIADFMAKYPNCQQC----TRGPVAWLRISIFSCEYER*XXXXX*HVYLTHFGNM 226
            + +KK IA+F+AK PNCQQ      R      RI +   ++E           L      
Sbjct: 982  NGMKKGIAEFVAKCPNCQQVKVEHQRPGGLAQRIELPEWKWE--MINMDFITGLPRSRRQ 1039

Query: 225  I*FEWLWTDLLVNT--LFPIRATISARDYAKLYI*EI 121
                W+  D +  +    P++ T +  DYAKLY+ EI
Sbjct: 1040 HDSIWVIVDRMTKSAHFLPVKTTNTTEDYAKLYVQEI 1076



 Score =  120 bits (302), Expect = 5e-25
 Identities = 81/217 (37%), Positives = 112/217 (51%), Gaps = 7/217 (3%)
 Frame = -3

Query: 750  KRTTVR*IHHLANLGV*PLDSEDGGVVVQTKAYSSLVAEMKKKQFNDPYLQQLKEGINKH 571
            +R   + +H LA LGV   DS  GG+ V  +A SSLV E+KKKQ  DP L +LK  + K 
Sbjct: 2373 RRELTKDVHRLACLGVRFTDSAKGGIAVANRAESSLVLEVKKKQDQDPILLELKANVQKQ 2432

Query: 570  KTMTFEQWGDNGTLSYQGRLCFPMWMDLERGSCQK-HTILGIPFTRI*KKYHNLKEIYWW 394
            + + FEQ GD G L YQGRLC PM   L+    ++ H+          K Y +L+E+YWW
Sbjct: 2433 RVLAFEQGGD-GALRYQGRLCVPMVDGLQEKIMEEAHSSRYSVHPGSTKMYRDLREVYWW 2491

Query: 393  DDIKKNIADFMAKYPNCQQC----TRGPVAWLRISIFSCEYER*XXXXX*HVYLTHFGNM 226
            + +KK IA+F+AK PNCQQ      R      RI +   ++E           L      
Sbjct: 2492 NGMKKGIAEFVAKCPNCQQVKVEHQRPGGLAQRIELPEWKWE--MINMDFITGLPRSRRQ 2549

Query: 225  I*FEWLWTDLLVNT--LFPIRATISARDYAKLYI*EI 121
                W+  D +  +    P++ T +  DYAKLY+ EI
Sbjct: 2550 HDSIWVIVDRMTKSAHFLPVKTTNTTEDYAKLYVQEI 2586



 Score =  120 bits (302), Expect = 5e-25
 Identities = 81/217 (37%), Positives = 112/217 (51%), Gaps = 7/217 (3%)
 Frame = -3

Query: 750  KRTTVR*IHHLANLGV*PLDSEDGGVVVQTKAYSSLVAEMKKKQFNDPYLQQLKEGINKH 571
            +R   + +H LA LGV   DS  GG+ V  +A SSLV E+KKKQ  DP L +LK  + K 
Sbjct: 3883 RRELTKDVHRLACLGVRFTDSAKGGIAVANRAESSLVLEVKKKQDQDPILLELKANVQKQ 3942

Query: 570  KTMTFEQWGDNGTLSYQGRLCFPMWMDLERGSCQK-HTILGIPFTRI*KKYHNLKEIYWW 394
            + + FEQ GD G L YQGRLC PM   L+    ++ H+          K Y +L+E+YWW
Sbjct: 3943 RVLAFEQGGD-GALRYQGRLCVPMVDGLQEKIMEEAHSSRYSVHPGSTKMYRDLREVYWW 4001

Query: 393  DDIKKNIADFMAKYPNCQQC----TRGPVAWLRISIFSCEYER*XXXXX*HVYLTHFGNM 226
            + +KK IA+F+AK PNCQQ      R      RI +   ++E           L      
Sbjct: 4002 NGMKKGIAEFVAKCPNCQQVKVEHQRPGGLAQRIELPEWKWE--MINMDFITGLPRSRRQ 4059

Query: 225  I*FEWLWTDLLVNT--LFPIRATISARDYAKLYI*EI 121
                W+  D +  +    P++ T +  DYAKLY+ EI
Sbjct: 4060 HDSIWVIVDRMTKSAHFLPVKTTNTTEDYAKLYVQEI 4096


>gb|AAV31171.1| Putative polyprotein, identical [Solanum tuberosum]
          Length = 1487

 Score =  117 bits (292), Expect = 8e-24
 Identities = 82/228 (35%), Positives = 115/228 (50%), Gaps = 8/228 (3%)
 Frame = -3

Query: 750  KRTTVR*IHHLANLGV*PLDSEDGGVVVQTKAYSSLVAEMKKKQFNDPYLQQLKEGINKH 571
            KR   + +H LA LGV  +DS  GG+ V  +A SSLV+E                 + K 
Sbjct: 987  KRELAKDVHRLACLGVRLIDSAKGGISVTNEAESSLVSEAN---------------VQKQ 1031

Query: 570  KTMTFEQWGDNGTLSYQGRLCFPMWMDLERGSCQK-HTILGIPFTRI*KKYHNLKEIYWW 394
            + + FEQ GD G L YQGRLC PM   L++   ++ H+          K Y +L+E+YWW
Sbjct: 1032 RVLAFEQGGD-GVLRYQGRLCVPMVDGLQKRIMEEAHSSRYSIHPGFTKMYRDLREVYWW 1090

Query: 393  DDIKKNIADFMAKYPNCQQC-----TRGPVAWLRISIFSCEYER*XXXXX*HVYLTHFGN 229
            + +KK IA+F+AK PNCQQ        G +A  RI +   ++E           L     
Sbjct: 1091 NGMKKGIAEFVAKCPNCQQVKVEHQRLGGLA-QRIELLELKWE--MINMDFITGLPRSRR 1147

Query: 228  MI*FEWLWTDLLVNT--LFPIRATISARDYAKLYI*EIIRFHGTPMSI 91
                 W+  D +  +    P++ T SA DYAKLYI E++R HG P+SI
Sbjct: 1148 QHDSIWVIVDRMTKSAHFLPVKTTNSAEDYAKLYIQEVVRLHGVPISI 1195



 Score = 85.1 bits (209), Expect = 3e-14
 Identities = 64/175 (36%), Positives = 93/175 (53%), Gaps = 9/175 (5%)
 Frame = -2

Query: 517  KIMFPDVDGLRKRIMSEAHNSRYSIHPDLKKIP*SQGDLLVGRHQKEH-SRFYGQV---S 350
            ++  P VDGL+KRIM EAH+SRYSIHP   K+     ++      K+  + F  +     
Sbjct: 1049 RLCVPMVDGLQKRIMEEAHSSRYSIHPGFTKMYRDLREVYWWNGMKKGIAEFVAKCPNCQ 1108

Query: 349  KLSAMHQRPRGLA*NIDILV*I*EMIDIDFITCLPHAFRKHDLI*VVVDRLTSQHTF--- 179
            ++   HQR  GLA  I++L    EMI++DFIT LP + R+HD I V+VDR+T    F   
Sbjct: 1109 QVKVEHQRLGGLAQRIELLELKWEMINMDFITGLPRSRRQHDSIWVIVDRMTKSAHFLPV 1168

Query: 178  --SNKGHNFSKGLCQVVYLRNHQISWDSDVHFLDHVAQFTIIFLKFLQKGLGKRV 20
              +N   +++K   Q V +R H +        +  ++     F KF QKGLG  V
Sbjct: 1169 KTTNSAEDYAKLYIQEV-VRLHGVP-------ISIISNRGAQFWKFFQKGLGLNV 1215


>ref|XP_006358737.1| PREDICTED: uncharacterized protein LOC102605124 [Solanum tuberosum]
          Length = 780

 Score =  109 bits (273), Expect = 1e-21
 Identities = 77/222 (34%), Positives = 112/222 (50%), Gaps = 9/222 (4%)
 Frame = -3

Query: 729  IHHLANLGV*PLDSEDGGVVVQTKAYSSLVAEMKKKQFNDPYLQQLKEGINKHKTMTFEQ 550
            +  LA+LGV  L++   G+VV      SLV E+K+KQF D  +Q+LKE +N+  T  FE 
Sbjct: 395  LRQLASLGVRLLETPKEGIVVHNAVEFSLVVEVKEKQFKDLKIQRLKENVNQGTTKGFEL 454

Query: 549  WGDNGTLSYQGRLCFPMWMDL-ERGSCQKHTILGIPFTRI*KKYHNLKEIYWWDDIKKNI 373
              D G L  Q RLC P    L +R   + H           K YH+LK +YWW D+KK I
Sbjct: 455  TQD-GVLCCQNRLCVPNVNGLRKRIMTEAHHSRYSIHPGSTKMYHDLKGVYWWRDMKKYI 513

Query: 372  ADFMAKYPNCQ------QCTRGPVAWLRISIFSCEYER*XXXXX*HVYLTHFGNMI*FEW 211
             +F+A+ PNCQ      Q   G +  + +  +  +                F ++    W
Sbjct: 514  VEFVAQCPNCQRVKVKHQKPGGYMQCMELPTWKWDMINMDFFIGLPRSFRKFDSI----W 569

Query: 210  LWTDLLVNTL--FPIRATISARDYAKLYI*EIIRFHGTPMSI 91
            +  D L  ++   PI+   +A +YA+LYI EI+R HG P+SI
Sbjct: 570  VIVDRLTKSVHFLPIKIDYTAEEYARLYIKEIVRLHGVPISI 611



 Score = 75.5 bits (184), Expect = 3e-11
 Identities = 60/170 (35%), Positives = 87/170 (51%), Gaps = 10/170 (5%)
 Frame = -2

Query: 517 KIMFPDVDGLRKRIMSEAHNSRYSIHPDLKKIP*SQGDLLVGRHQKEHS-RFYGQV---S 350
           ++  P+V+GLRKRIM+EAH+SRYSIHP   K+      +   R  K++   F  Q     
Sbjct: 465 RLCVPNVNGLRKRIMTEAHHSRYSIHPGSTKMYHDLKGVYWWRDMKKYIVEFVAQCPNCQ 524

Query: 349 KLSAMHQRPRGLA*NIDILV*I*EMIDIDFITCLPHAFRKHDLI*VVVDRLTSQHTFSNK 170
           ++   HQ+P G    +++     +MI++DF   LP +FRK D I V+VDRLT    F   
Sbjct: 525 RVKVKHQKPGGYMQCMELPTWKWDMINMDFFIGLPRSFRKFDSIWVIVDRLTKSVHFLPI 584

Query: 169 GHNFSKG------LCQVVYLRNHQISWDSDVHFLDHVAQFTIIFLKFLQK 38
             +++        + ++V L    IS  S     D  AQFT  F K  QK
Sbjct: 585 KIDYTAEEYARLYIKEIVRLHGVPISIIS-----DRGAQFTTKFWKSFQK 629


>ref|XP_006364939.1| PREDICTED: uncharacterized protein LOC102581051 [Solanum tuberosum]
          Length = 1946

 Score =  103 bits (257), Expect(2) = 6e-20
 Identities = 79/228 (34%), Positives = 113/228 (49%), Gaps = 9/228 (3%)
 Frame = -3

Query: 747  RTTVR*IHHLANLGV*PLDSEDGGVVVQTKAYSSLVAEMKKKQFNDPYLQQLKEGINKHK 568
            R   R +H LA LGV   +  +GGVVV   A SSLV E+  KQ  D  L +LK  + + K
Sbjct: 1433 REMAREVHRLARLGVRLEEVGNGGVVVVDGARSSLVDEVIAKQDLDSSLLELKALVKEGK 1492

Query: 567  TMTFEQWGDNGTLSYQGRLCFPMWMDLERGSCQK-HTILGIPFTRI*KKYHNLKEIYWWD 391
               F Q GD G L YQGRLC P    L     ++ H           K Y +L+++YWW 
Sbjct: 1493 VEVFSQGGD-GALRYQGRLCVPCVDGLREKILEEAHNSSYSIHPGSTKMYRDLRDVYWWG 1551

Query: 390  DIKKNIADFMAKYPNCQQCT----RGPVAWLRISIFSCEYER*XXXXX*HVYLTH--FGN 229
             +KK+IA F++   +CQQ      R       I I + ++E         +  T   FG+
Sbjct: 1552 GMKKDIAKFVSGCHSCQQVKAEHQRPGGLTQDIEIPTWKWEEINMDFVVGLPKTRKGFGS 1611

Query: 228  MI*FEWLWTDLLVNT--LFPIRATISARDYAKLYI*EIIRFHGTPMSI 91
            +    W+  D +  +    P++ T  A DYA+LYI +++R HG P+SI
Sbjct: 1612 I----WVVVDRMTKSAHFLPVKTTYGAEDYARLYIHDLVRLHGIPLSI 1655



 Score = 21.2 bits (43), Expect(2) = 6e-20
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -2

Query: 787  SMGSLAHVKLVIQENHGEIN 728
            SMGSLAHV +  +E   E++
Sbjct: 1421 SMGSLAHVDIGDREMAREVH 1440



 Score = 74.7 bits (182), Expect = 4e-11
 Identities = 61/174 (35%), Positives = 85/174 (48%), Gaps = 8/174 (4%)
 Frame = -2

Query: 517  KIMFPDVDGLRKRIMSEAHNSRYSIHPDLKKIP*SQGDLLV-GRHQKEHSRFYG---QVS 350
            ++  P VDGLR++I+ EAHNS YSIHP   K+     D+   G  +K+ ++F        
Sbjct: 1509 RLCVPCVDGLREKILEEAHNSSYSIHPGSTKMYRDLRDVYWWGGMKKDIAKFVSGCHSCQ 1568

Query: 349  KLSAMHQRPRGLA*NIDILV*I*EMIDIDFITCLPHAFRKHDLI*VVVDRLTSQHTFSNK 170
            ++ A HQRP GL  +I+I     E I++DF+  LP   +    I VVVDR+T    F   
Sbjct: 1569 QVKAEHQRPGGLTQDIEIPTWKWEEINMDFVVGLPKTRKGFGSIWVVVDRMTKSAHFLPV 1628

Query: 169  GHNFSKGLCQVVYL----RNHQISWDSDVHFLDHVAQFTIIFLKFLQKGLGKRV 20
               +       +Y+    R H I         D   QFT  F K  Q+GLG RV
Sbjct: 1629 KTTYGAEDYARLYIHDLVRLHGIPLSI---ISDRGTQFTSHFWKSFQRGLGTRV 1679


>gb|AAP43916.1| integrase [Gossypium herbaceum]
          Length = 353

 Score = 84.7 bits (208), Expect = 4e-14
 Identities = 67/210 (31%), Positives = 103/210 (49%), Gaps = 11/210 (5%)
 Frame = -3

Query: 687 EDGGVVVQTKAYSSLVAEMKKKQFNDPYL----QQLKEGINKHKTMTFEQWGDNGTLSYQ 520
           +DG ++ + +   + V ++K+KQ  D  L    QQ+KEG    KT  F   GD G L ++
Sbjct: 115 DDGSLLAELQVRPTWVDQIKEKQLEDESLVTRFQQVKEG----KTSEFGLNGD-GVLCFR 169

Query: 519 GRLCFPMWMDLERGSCQK-HTILGIPFTRI*KKYHNLKEIYWWDDIKKNIADFMAKYPNC 343
           GR+C P   DL +   ++ H  L        K YH+L+E+YWW  +K+ + +F+ K   C
Sbjct: 170 GRICVPKDSDLRQTILKEAHGGLCAMHPGGNKLYHDLRELYWWPRLKREVTEFVGKCLTC 229

Query: 342 QQCTRG---PVAWLR-ISIFSCEYER*XXXXX*HVYLTHFGNMI*FEWLWTDLLVNT--L 181
           QQ       P   L+ + I   ++ER        + LT         W+  D L  +   
Sbjct: 230 QQVKAEHQLPSGLLQPVKIPLWKWERVTMDFASGLPLTPSKKDS--VWVIVDRLTKSAHF 287

Query: 180 FPIRATISARDYAKLYI*EIIRFHGTPMSI 91
            P+R   S +  AKLY+ EI+R HG P+SI
Sbjct: 288 IPVRTDFSLQQLAKLYVAEIVRLHGVPVSI 317


>ref|XP_004248998.1| PREDICTED: uncharacterized protein LOC101264383 [Solanum
           lycopersicum]
          Length = 256

 Score = 81.6 bits (200), Expect = 4e-13
 Identities = 52/145 (35%), Positives = 77/145 (53%), Gaps = 7/145 (4%)
 Frame = -3

Query: 750 KRTTVR*IHHLANLGV*PLDSEDGGVVVQTKAYSSLVAEMKKKQFNDPYLQQLKEGINKH 571
           K+  V+ +H LA LGV   +S  GG +V+  + S LV  +K KQ  DP   +LKE +   
Sbjct: 32  KKELVKDVHRLARLGVRLEESSKGGFMVRHNSDSCLVLYVKSKQHLDPLFMELKESVLNK 91

Query: 570 KTMTFEQWGDNGTLSYQGRLCF-------PMWMDLERGSCQKHTILGIPFTRI*KKYHNL 412
              +F Q G++G L YQ RLC           MD   GS  +++I         K YH+ 
Sbjct: 92  NNESFSQ-GEDGVLRYQERLCVLDVDGLRDKIMDEAHGS--RYSI----HPGDTKMYHDF 144

Query: 411 KEIYWWDDIKKNIADFMAKYPNCQQ 337
           ++IYWW+ IK+ +A F+++ PN  Q
Sbjct: 145 RDIYWWNGIKREVAKFVSRCPNWHQ 169


>gb|EOY08659.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
          Length = 937

 Score = 79.7 bits (195), Expect = 1e-12
 Identities = 63/228 (27%), Positives = 111/228 (48%), Gaps = 8/228 (3%)
 Frame = -3

Query: 750  KRTTVR*IHHLANLGV*PLDSEDGGVVVQTKAYSSLVAEMKKKQFNDPYLQQLKEGINKH 571
            +R+ V+ IH L ++GV    +E   ++   +    L+  +K+ Q  D ++ +  E     
Sbjct: 399  RRSLVKEIHSLGDIGVRLEVAETNALLAHFRVRPILMDRIKEAQSKDEFVIKALEDPRGK 458

Query: 570  KTMTFEQWGDNGTLSYQGRLCFPMWMDLERGSCQK-HTILGIPFTRI*KKYHNLKEIYWW 394
            K   F + G +G L Y  RL  P    L R   ++ H    +      K Y +LKE+YWW
Sbjct: 459  KGKMFTK-GTDGVLRYGTRLYVPDSDGLRREILEEAHMAAYVIHPGATKMYQDLKEVYWW 517

Query: 393  DDIKKNIADFMAKYPNCQQCT---RGPVAWLR-ISIFSCEYER*XXXXX*HVYLTHFG-N 229
            + +K+++A+F++K   CQQ     + P   L+ + +   ++E         +  T+ G +
Sbjct: 518  EGLKRDVAEFVSKCLVCQQVKAEHQKPAGLLQPLPVPEWKWEHIAMDFVTGLPRTNGGYD 577

Query: 228  MI*FEWLWTDLLVNT--LFPIRATISARDYAKLYI*EIIRFHGTPMSI 91
             I   W+  D L  +    P++ T  A  YA++Y+ EI+R HG P+SI
Sbjct: 578  SI---WIVVDRLTKSAHFLPVKTTYGAAQYARVYVDEIVRLHGIPISI 622


>ref|XP_006356881.1| PREDICTED: uncharacterized protein LOC102603208 [Solanum tuberosum]
          Length = 375

 Score = 79.0 bits (193), Expect = 2e-12
 Identities = 51/138 (36%), Positives = 71/138 (51%)
 Frame = -3

Query: 750 KRTTVR*IHHLANLGV*PLDSEDGGVVVQTKAYSSLVAEMKKKQFNDPYLQQLKEGINKH 571
           K+  VR +H L  LGV  + S   GV+V   + SS VA +K K+  DP L +LKE   K 
Sbjct: 11  KKELVRDVHRLVQLGVQIVYSTKSGVMVHNCSESSFVAYVKAKKSLDPTLVELKEAGLKK 70

Query: 570 KTMTFEQWGDNGTLSYQGRLCFPMWMDLERGSCQKHTILGIPFTRI*KKYHNLKEIYWWD 391
               F Q GD+    +         +  E  S +    LG       + YH+L+EIYWW+
Sbjct: 71  SVEDFSQGGDDDLREH---------IISETDSSRYSIHLGAT-----EMYHDLREIYWWN 116

Query: 390 DIKKNIADFMAKYPNCQQ 337
            +KK+I +F+ K PNCQQ
Sbjct: 117 GMKKDIEEFVVKCPNCQQ 134


>gb|EOY00215.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
          Length = 1537

 Score = 77.0 bits (188), Expect = 9e-12
 Identities = 63/217 (29%), Positives = 104/217 (47%), Gaps = 7/217 (3%)
 Frame = -3

Query: 720  LANLGV*PLDSEDGGVVVQTKAYSSLVAEMKKKQFNDPYLQQLKEGINKHKTMTFEQWGD 541
            + +LG+   + EDG ++       SL+ ++++ Q +D +L+Q  + +   K   F +  D
Sbjct: 1020 MKSLGIQLNNGEDGTLLASFVVRPSLLNQIRELQKSDDWLKQEVQKLQDGKASEF-RLSD 1078

Query: 540  NGTLSYQGRLCFPMWMDLERGSCQK-HTILGIPFTRI*KKYHNLKEIYWWDDIKKNIADF 364
            +GTL  + R+C P    L R   ++ H           K Y  +KE YWW  ++++IA+F
Sbjct: 1079 DGTLMLRDRICVPKDDQLRRAILEEAHYSAYALHPGSTKMYRTIKESYWWPGMERDIAEF 1138

Query: 363  MAKYPNCQQCT---RGPVAWLR-ISIFSCEYER*XXXXX*HVYLTHFGNMI*FEWLWTDL 196
            +AK   CQQ     + P   L+ +SI   ++E         +  T  G      W+  D 
Sbjct: 1139 VAKCLTCQQIKAEHQKPSGTLQPLSIPEWKWEHVTMDFVLGLPRTQSGKDA--IWVIVDR 1196

Query: 195  LVNT--LFPIRATISARDYAKLYI*EIIRFHGTPMSI 91
            L  +     I +T S    A+LYI EI+R HG P+SI
Sbjct: 1197 LTKSAHFLAIHSTYSIERLARLYIDEIVRLHGVPVSI 1233


>ref|XP_006352152.1| PREDICTED: uncharacterized protein LOC102604634 [Solanum tuberosum]
          Length = 427

 Score = 76.6 bits (187), Expect = 1e-11
 Identities = 58/178 (32%), Positives = 88/178 (49%), Gaps = 12/178 (6%)
 Frame = -2

Query: 517 KIMFPDVDGLRKRIMSEAHNSRYSIHP--------DLKKIP*SQGDLLVGRHQKEHSRFY 362
           ++  P VD LR++I++EAHNSRYSIHP        DL+++            +++ + F 
Sbjct: 209 RLCVPKVDELRQQILAEAHNSRYSIHPGGTTKMYRDLREV------FWWNDMKRDIANFV 262

Query: 361 GQV---SKLSAMHQRPRGLA*NIDILV*I*EMIDIDFITCLPHAFRKHDLI*VVVDRLT- 194
            +     ++   H +P G+   I+I     E+I++DFIT LPH  R+HD I V+VDR+T 
Sbjct: 263 AKCLNSQQVKVEHHKPGGICQEINIPTWNWEVINMDFITALPHTRRQHDSIWVIVDRVTK 322

Query: 193 SQHTFSNKGHNFSKGLCQVVYLRNHQISWDSDVHFLDHVAQFTIIFLKFLQKGLGKRV 20
           S H    K  N  +    +      ++ W       D   QFT  F K  QK L  +V
Sbjct: 323 SAHFLVVKTTNSVEDYANLYIDEIVRLHWVILSIISDRGPQFTSHFWKSFQKDLSTQV 380



 Score = 67.8 bits (164), Expect = 5e-09
 Identities = 54/187 (28%), Positives = 85/187 (45%), Gaps = 10/187 (5%)
 Frame = -3

Query: 621 QFNDPYLQQLKEGINKHKTMTFEQWGDNGTLSYQGRLCFPMWMDLERGSCQK--HTILGI 448
           + N P    L+  +++ +     Q GD G L YQGRLC P   +L +    +  ++   I
Sbjct: 175 RMNPPEFLGLQGAVHQQRVEVISQGGD-GVLHYQGRLCVPKVDELRQQILAEAHNSRYSI 233

Query: 447 PFTRI*KKYHNLKEIYWWDDIKKNIADFMAKYPNCQQC------TRGPVAWLRISIFSCE 286
                 K Y +L+E++WW+D+K++IA+F+AK  N QQ         G    + I  ++ E
Sbjct: 234 HPGGTTKMYRDLREVFWWNDMKRDIANFVAKCLNSQQVKVEHHKPGGICQEINIPTWNWE 293

Query: 285 YER*XXXXX*HVYLTHFGNMI*FEWLWTDLLVNT--LFPIRATISARDYAKLYI*EIIRF 112
                        L H        W+  D +  +     ++ T S  DYA LYI EI+R 
Sbjct: 294 ----VINMDFITALPHTRRQHDSIWVIVDRVTKSAHFLVVKTTNSVEDYANLYIDEIVRL 349

Query: 111 HGTPMSI 91
           H   +SI
Sbjct: 350 HWVILSI 356


>dbj|BAL46523.1| hypothetical protein [Gentiana scabra x Gentiana triflora]
          Length = 1152

 Score = 73.6 bits (179), Expect = 1e-10
 Identities = 66/222 (29%), Positives = 102/222 (45%), Gaps = 9/222 (4%)
 Frame = -3

Query: 729  IHHLANLGV*PLDSE-DGGVVVQTKAYSSLVAEMKKKQFNDPYLQQLKEGINKHKTMTFE 553
            IH L +L +  ++ E +        A S L+ +++ KQ  DP L  LK    +  T+ + 
Sbjct: 636  IHQLDSLQIQVVEREGEAQCFAPLMARSELLDDIRAKQDEDPVLVDLKRVAREKPTVGY- 694

Query: 552  QWGDNGTLSYQGRLCFPMWMDLERGSCQK-HTILGIPFTRI*KKYHNLKEIYWWDDIKKN 376
            Q   NG L Y  RLC P    L +    + H I         K Y +LKE YWW  +K N
Sbjct: 695  QLDKNGHLWYGDRLCVPDVDGLRQQVMDEAHKIAFAVHPGSTKMYRDLKERYWWLGMKLN 754

Query: 375  IADFMAKYPNCQQCT---RGPVAWLR-ISIFSCEYER*XXXXX*HVYLTHFG-NMI*FEW 211
            IA+F+AK   CQ+     R P   L+ + +   ++E         +  T  G +MI   W
Sbjct: 755  IAEFVAKCDTCQRVKAEHRRPGGLLKPLEVPEWKWENITMDFITGLPRTKSGHDMI---W 811

Query: 210  LWTDLLVNT--LFPIRATISARDYAKLYI*EIIRFHGTPMSI 91
            +  D L  +    P +  +  + + +LY+  I+R HG P+SI
Sbjct: 812  VIVDRLTKSAHFLPCKVDMPIKKFTQLYLDNIVRLHGVPLSI 853


>emb|CAN61139.1| hypothetical protein VITISV_009489 [Vitis vinifera]
          Length = 984

 Score = 72.4 bits (176), Expect = 2e-10
 Identities = 61/206 (29%), Positives = 89/206 (43%), Gaps = 7/206 (3%)
 Frame = -3

Query: 687  EDGGVVVQTKAYSSLVAEMKKKQFNDPYLQQLKEGINKHKTMTFEQWGDNGTLSYQGRLC 508
            + G ++   +    LV  +K  Q ND  L QL E + K   + F    D+G L +  RLC
Sbjct: 500  DSGALIANFRVQPDLVGRIKALQKNDLNLVQLMEEVKKGSKLDFVL-SDDGILRFGTRLC 558

Query: 507  FPMWMDLER-----GSCQKHTILGIPFTRI*KKYHNLKEIYWWDDIKKNIADFMAKYPNC 343
             P   DL R       C K  I         K Y +L++ YWW  +K +IA F+A+   C
Sbjct: 559  VPNDEDLRRELLEEAHCSKFAI----HPERTKMYKDLRQNYWWSGMKCDIAQFVAQCLVC 614

Query: 342  QQCTRGPVAWLRISIFSCEYER*XXXXX*HVYLTHFGNMI*FEWLWTDLLVNT--LFPIR 169
            QQ          ++I   ++E         +  T  GN     W+  D L  +    P++
Sbjct: 615  QQ---------PLAIPEWKWEHITMDFVIGLPRTLGGNNA--IWVIVDRLTKSAHFLPMK 663

Query: 168  ATISARDYAKLYI*EIIRFHGTPMSI 91
               S    A LY+ EI+R HG P+SI
Sbjct: 664  VNFSLDRLASLYVKEIVRMHGVPVSI 689


>gb|EOY14099.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
          Length = 1502

 Score = 71.2 bits (173), Expect = 5e-10
 Identities = 58/224 (25%), Positives = 100/224 (44%), Gaps = 4/224 (1%)
 Frame = -3

Query: 750  KRTTVR*IHHLANLGV*PLDSEDGGVVVQTKAYSSLVAEMKKKQFNDPYLQQLKEGINKH 571
            +R+ VR IH L ++GV    +E   ++   +    L+  +K+ Q  D ++ +  E     
Sbjct: 1061 RRSLVREIHSLGDIGVRLEVAETNALLAHFRVRPILMDRIKEAQSKDEFVIKALEDPQGR 1120

Query: 570  KTMTFEQWGDNGTLSYQGRLCFPMWMDLERGSCQK-HTILGIPFTRI*KKYHNLKEIYWW 394
            K   F + G +G L Y  RL  P    L R   ++ H    +      K Y +LKE+YWW
Sbjct: 1121 KGKMFTK-GTDGVLRYGTRLYVPDGDGLRREILEEAHMAAYVVHPGATKMYQDLKEVYWW 1179

Query: 393  DDIKKNIADFMAKYPNCQQCTRGPVAWLRISIFSCEYER*XXXXX*HVYLTHFG-NMI*F 217
            + +K+++A+F                   + +   ++E         +  T  G + I  
Sbjct: 1180 EGLKRDVAEF------------------PLPVLEWKWEHIAMDFVTGLPRTSGGYDSI-- 1219

Query: 216  EWLWTDLLVNT--LFPIRATISARDYAKLYI*EIIRFHGTPMSI 91
             W+  D L  +    P++ T  A  YA++Y+ EI+R HG P+SI
Sbjct: 1220 -WIVVDRLTKSAHFLPVKTTYGAAQYARVYVDEIVRLHGIPISI 1262


>gb|AAM08802.1|AC090486_12 putative retroelement [Oryza sativa Japonica Group]
            gi|31431155|gb|AAP52977.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 1594

 Score = 70.5 bits (171), Expect = 8e-10
 Identities = 57/203 (28%), Positives = 98/203 (48%), Gaps = 7/203 (3%)
 Frame = -3

Query: 678  GVVVQTKAYSSLVAEMKKKQFNDPYLQQLKEGINKHKTMTFEQWGDNGTLSYQGRLCFPM 499
            G V   +A  +L+ ++++ Q NDP +Q++K+ I + K + F +  + GT+    R+C P 
Sbjct: 1239 GFVAALEAKPTLIDQVREAQINDPDIQEIKKNIRRGKAIGFLE-DEQGTVWLGERICVPD 1297

Query: 498  WMDLERGSCQK-HTILGIPFTRI*KKYHNLKEIYWWDDIKKNIADFMAKYPNCQQCT--- 331
              DL+    ++ H  L        K Y +LKE +WW  +K+ IA+++A    CQ+     
Sbjct: 1298 NKDLKDAILKEAHDTLYSIHPGSTKMYQDLKERFWWASMKREIAEYVAVCDVCQRVKAEH 1357

Query: 330  RGPVAWLR-ISIFSCEYER*XXXXX*HVYLTHFGNMI*FEWLWTDLL--VNTLFPIRATI 160
            + PV  L+ + I   ++E         +  T  G+     W+  D L  V    P++ T 
Sbjct: 1358 QKPVGLLQPLKIPEWKWEEIGMDFITGLPRTSSGHD--SIWVIVDRLTKVAHFIPVKTTY 1415

Query: 159  SARDYAKLYI*EIIRFHGTPMSI 91
            S    A+LY+  I+  HG P  I
Sbjct: 1416 SGSRLAELYMARIVCLHGVPKKI 1438


>gb|AAX96433.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
            Japonica Group] gi|77550058|gb|ABA92855.1|
            retrotransposon protein, putative, Ty3-gypsy subclass
            [Oryza sativa Japonica Group]
          Length = 1636

 Score = 69.7 bits (169), Expect = 1e-09
 Identities = 55/203 (27%), Positives = 98/203 (48%), Gaps = 7/203 (3%)
 Frame = -3

Query: 678  GVVVQTKAYSSLVAEMKKKQFNDPYLQQLKEGINKHKTMTFEQWGDNGTLSYQGRLCFPM 499
            G V   +A  +L+ ++++ Q NDP +Q++K+ + + K ++F +  + GT+    R+C P 
Sbjct: 1140 GFVAALEAKPTLIDQVREAQINDPDIQEIKKNMRRGKAISFLE-DEQGTVWLGKRICVPD 1198

Query: 498  WMDLERGSCQK-HTILGIPFTRI*KKYHNLKEIYWWDDIKKNIADFMAKYPNCQQCT--- 331
              DL+    ++ H  L        K Y +LKE +WW  +K+ IA+++A    CQ+     
Sbjct: 1199 NKDLKDAILKEAHDTLYSIHPGSTKMYQDLKERFWWASMKREIAEYVAVCDVCQRVKAEH 1258

Query: 330  RGPVAWLR-ISIFSCEYER*XXXXX*HVYLTHFGNMI*FEWLWTDLL--VNTLFPIRATI 160
            + P   L+ + I   ++E         +  T  G+     W+  D L  V    P++ T 
Sbjct: 1259 QKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSLGHD--SIWVIVDRLTKVAHFIPVKTTY 1316

Query: 159  SARDYAKLYI*EIIRFHGTPMSI 91
            S    A+LY+  I+  HG P  I
Sbjct: 1317 SGSRLAELYMARIVCLHGVPKKI 1339


>gb|AAX95143.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
            Japonica Group] gi|77549637|gb|ABA92434.1|
            retrotransposon protein, putative, Ty3-gypsy subclass
            [Oryza sativa Japonica Group]
          Length = 1847

 Score = 69.3 bits (168), Expect = 2e-09
 Identities = 57/203 (28%), Positives = 98/203 (48%), Gaps = 7/203 (3%)
 Frame = -3

Query: 678  GVVVQTKAYSSLVAEMKKKQFNDPYLQQLKEGINKHKTMTFEQWGDNGTLSYQGRLCFPM 499
            G V   +A  +L+ ++++ Q NDP +Q++K+ + + K + F +  + GT+    R+C P 
Sbjct: 1416 GFVAALEAKPTLIDQVREAQINDPDIQEIKKNMRRGKAIGFLE-DEQGTVWLGERICVPD 1474

Query: 498  WMDLERGSCQK-HTILGIPFTRI*KKYHNLKEIYWWDDIKKNIADFMAKYPNCQQCT--- 331
              DL+    ++ H  L        K Y +LKE +WW  +K+ IA+++A    CQ+     
Sbjct: 1475 NKDLKDAILKEAHDTLYSIHPGSTKMYQDLKERFWWASMKREIAEYVAVCVVCQRVKAEH 1534

Query: 330  RGPVAWLR-ISIFSCEYER*XXXXX*HVYLTHFGNMI*FEWLWTDLL--VNTLFPIRATI 160
            + PV  L+ + I   ++E         +  T  G+     W+  D L  V    PI+ T 
Sbjct: 1535 QKPVGLLQPLKIPEWKWEELGMDFITGLPRTSSGHD--SIWVIVDRLTKVAHFIPIKTTY 1592

Query: 159  SARDYAKLYI*EIIRFHGTPMSI 91
            S    A+LY+  I+  HG P  I
Sbjct: 1593 SGSRLAELYMARIVCLHGVPKKI 1615


>gb|AAV31278.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1727

 Score = 69.3 bits (168), Expect = 2e-09
 Identities = 55/203 (27%), Positives = 99/203 (48%), Gaps = 7/203 (3%)
 Frame = -3

Query: 678  GVVVQTKAYSSLVAEMKKKQFNDPYLQQLKEGINKHKTMTFEQWGDNGTLSYQGRLCFPM 499
            G V   +A  +L+ ++++ Q NDP +Q++K+ + + K + F +  ++GT+    R+C P 
Sbjct: 1156 GFVAALEAKPTLIDQVREAQINDPDIQEIKKNMRRGKAIGFLE-DEHGTVRLGERICVPD 1214

Query: 498  WMDLERGSCQK-HTILGIPFTRI*KKYHNLKEIYWWDDIKKNIADFMAKYPNCQQCT--- 331
              DL+    ++ H  L        K Y +LKE +WW  +K+ IA+++A    CQ+     
Sbjct: 1215 NKDLKDAILKEAHDTLYSIHPGSTKMYQDLKERFWWASMKREIAEYVAVCDVCQRVKAEH 1274

Query: 330  RGPVAWLR-ISIFSCEYER*XXXXX*HVYLTHFGNMI*FEWLWTDLL--VNTLFPIRATI 160
            + P + L+ + I   ++E         +  T  G+     W+  D L  V    P++ T 
Sbjct: 1275 QKPASLLQPLKIPEWKWEEIGMDFITGLPRTSSGHD--SIWVIVDRLTKVAHFIPVKTTY 1332

Query: 159  SARDYAKLYI*EIIRFHGTPMSI 91
            S    A+LY+  I+  HG P  I
Sbjct: 1333 SGSRLAELYMARIVCLHGVPKKI 1355